GET1P1 (GET1 pseudogene 1) - Rat Genome Database

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Gene: GET1P1 (GET1 pseudogene 1) Homo sapiens
Analyze
Symbol: GET1P1
Name: GET1 pseudogene 1
RGD ID: 6483967
HGNC Page HGNC:44010
Description:
Type: pseudo (Ensembl: transcribed_processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: tryptophan rich basic protein pseudogene 1; WRBP1
Related Functional Gene: GET1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384112,693,449 - 112,693,848 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4112,693,459 - 112,693,792 (-)EnsemblGRCh38hg38GRCh38
GRCh374113,614,605 - 113,615,004 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364113,834,043 - 113,834,396 (-)NCBINCBI36Build 36hg18NCBI36
Celera4110,906,202 - 110,906,555 (-)NCBICelera
Cytogenetic Map4q25ENTREZGENE
HuRef4109,342,396 - 109,342,749 (-)ENTREZGENEHuRef
CHM1_14113,591,059 - 113,591,412 (-)NCBICHM1_1
T2T-CHM13v2.04116,001,807 - 116,002,206 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:11181995  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:253
Count of miRNA genes:244
Interacting mature miRNAs:252
Transcripts:ENST00000423352
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 29 27 24 10 38 6 110 15 141 11 62 31 4 23 41
Below cutoff 80 74 121 66 77 60 223 73 273 93 117 77 7 72 83 1

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000423352
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4112,693,459 - 112,693,792 (-)Ensembl
Protein Sequences
GenBank Protein EAX06286 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences


Additional Information

Database Acc Id Source(s)
COSMIC GET1P1 COSMIC
Ensembl Genes ENSG00000248633 Ensembl, ENTREZGENE
GTEx ENSG00000248633 GTEx
HGNC ID HGNC:44010 ENTREZGENE
Human Proteome Map GET1P1 Human Proteome Map
NCBI Gene WRBP1 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-29 GET1P1  GET1 pseudogene 1  WRBP1  tryptophan rich basic protein pseudogene 1  Symbol and/or name change 19259463 PROVISIONAL