GET1 (guided entry of tail-anchored proteins factor 1) - Rat Genome Database

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Gene: GET1 (guided entry of tail-anchored proteins factor 1) Homo sapiens
Analyze
Symbol: GET1
Name: guided entry of tail-anchored proteins factor 1
RGD ID: 1352136
HGNC Page HGNC:12790
Description: Predicted to enable protein-membrane adaptor activity. Involved in protein stabilization and tail-anchored membrane protein insertion into ER membrane. Part of GET complex.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: CHD5; congenital heart disease 5 protein; FLJ51808; tail-anchored protein insertion receptor WRB; tryptophan-rich basic protein; tryptophan-rich protein; WRB
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: GET1P1  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382139,380,326 - 39,428,528 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2139,377,698 - 39,428,528 (+)EnsemblGRCh38hg38GRCh38
GRCh372140,752,252 - 40,800,454 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362139,674,140 - 39,691,496 (+)NCBINCBI36Build 36hg18NCBI36
Build 342139,674,139 - 39,691,486NCBI
Celera2125,949,901 - 25,967,508 (+)NCBICelera
Cytogenetic Map21q22.2NCBI
HuRef2126,220,985 - 26,238,560 (+)NCBIHuRef
CHM1_12140,313,371 - 40,330,979 (+)NCBICHM1_1
T2T-CHM13v2.02137,764,912 - 37,813,128 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Autism  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9480850   PMID:9544840   PMID:10830953   PMID:12189208   PMID:12477932   PMID:15489334   PMID:18029348   PMID:20200978   PMID:21444755   PMID:21873635   PMID:23041287   PMID:26186194  
PMID:27100087   PMID:27226539   PMID:27432908   PMID:28514442   PMID:30098192   PMID:31417168   PMID:32187542   PMID:32296183   PMID:32628020   PMID:32910895   PMID:33961781   PMID:34373451  
PMID:35271311   PMID:36114006   PMID:36610398  


Genomics

Comparative Map Data
GET1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382139,380,326 - 39,428,528 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2139,377,698 - 39,428,528 (+)EnsemblGRCh38hg38GRCh38
GRCh372140,752,252 - 40,800,454 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362139,674,140 - 39,691,496 (+)NCBINCBI36Build 36hg18NCBI36
Build 342139,674,139 - 39,691,486NCBI
Celera2125,949,901 - 25,967,508 (+)NCBICelera
Cytogenetic Map21q22.2NCBI
HuRef2126,220,985 - 26,238,560 (+)NCBIHuRef
CHM1_12140,313,371 - 40,330,979 (+)NCBICHM1_1
T2T-CHM13v2.02137,764,912 - 37,813,128 (+)NCBIT2T-CHM13v2.0
Get1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391695,946,600 - 95,959,052 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1695,946,607 - 95,959,052 (+)EnsemblGRCm39 Ensembl
GRCm381696,145,400 - 96,157,852 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1696,145,407 - 96,157,852 (+)EnsemblGRCm38mm10GRCm38
MGSCv371696,367,026 - 96,379,459 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361696,250,329 - 96,262,762 (+)NCBIMGSCv36mm8
Celera1697,220,073 - 97,232,510 (+)NCBICelera
Cytogenetic Map16C4NCBI
cM Map1656.84NCBI
Get1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81148,915,298 - 48,929,235 (+)NCBIGRCr8
mRatBN7.21135,438,555 - 35,460,156 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1135,445,815 - 35,459,973 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1144,103,011 - 44,116,953 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01136,774,391 - 36,788,333 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01135,920,216 - 35,934,148 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01136,497,513 - 36,511,445 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1136,497,509 - 36,511,535 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01140,028,142 - 40,042,074 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41136,453,285 - 36,467,217 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11136,510,873 - 36,524,805 (+)NCBI
Celera1133,012,406 - 33,026,338 (-)NCBICelera
Cytogenetic Map11q11NCBI
Get1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540738,160,218 - 38,168,808 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540738,160,951 - 38,168,808 (+)NCBIChiLan1.0ChiLan1.0
GET1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22235,478,596 - 35,496,578 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12130,334,471 - 30,352,451 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02125,734,722 - 25,752,196 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12139,072,103 - 39,088,937 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2139,072,103 - 39,088,928 (+)Ensemblpanpan1.1panPan2
GET1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13134,282,650 - 34,299,916 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3133,396,185 - 33,433,643 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03133,630,745 - 33,667,483 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3133,650,809 - 33,674,732 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13133,502,811 - 33,539,864 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03133,508,008 - 33,544,636 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03133,998,996 - 34,035,703 (+)NCBIUU_Cfam_GSD_1.0
GET1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13202,962,664 - 202,979,902 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113202,962,652 - 202,978,390 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213213,126,901 - 213,142,261 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Get1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474524,627,526 - 24,635,159 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474524,625,206 - 24,635,129 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in GET1
36 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46670405)x3 copy number gain See cases [RCV000050445] Chr21:7749532..46670405 [GRCh38]
Chr21:15499847..48090317 [GRCh37]
Chr21:14421718..46914745 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic|conflicting interpretations of pathogenicity|conflicting data from submitters
GRCh38/hg38 21q22.13-22.3(chr21:37135738-42434515)x1 copy number loss See cases [RCV000051047] Chr21:37135738..42434515 [GRCh38]
Chr21:38508038..43854625 [GRCh37]
Chr21:37429908..42727694 [NCBI36]
Chr21:21q22.13-22.3
pathogenic
GRCh37/hg19 21q22.1-22.3(chr21:35527952-44298520)x1 copy number loss See cases [RCV000052807] Chr21:35527952..44298520 [GRCh37]
Chr21:34449822..43171589 [NCBI36]
Chr21:21q22.1-22.3
pathogenic
GRCh38/hg38 21q22.12-22.3(chr21:35027972-46670405)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052836]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052836]|See cases [RCV000052836] Chr21:35027972..46670405 [GRCh38]
Chr21:36400269..48090317 [GRCh37]
Chr21:35322139..46914745 [NCBI36]
Chr21:21q22.12-22.3
pathogenic
GRCh38/hg38 21q22.13-22.3(chr21:38273492-46670405)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052838]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052838]|See cases [RCV000052838] Chr21:38273492..46670405 [GRCh38]
Chr21:39645414..48090317 [GRCh37]
Chr21:38567284..46914745 [NCBI36]
Chr21:21q22.13-22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46623792)x3 copy number gain See cases [RCV000053042] Chr21:7749532..46623792 [GRCh38]
Chr21:14595524..48043704 [GRCh37]
Chr21:13517395..46868132 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46623792)x3 copy number gain See cases [RCV000053043] Chr21:7749532..46623792 [GRCh38]
Chr21:14629063..48043704 [GRCh37]
Chr21:13550934..46868132 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46670546)x3 copy number gain See cases [RCV000053045] Chr21:7749532..46670546 [GRCh38]
Chr21:15499647..48090458 [GRCh37]
Chr21:14421518..46914886 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46661140)x3 copy number gain See cases [RCV000053065] Chr21:7749532..46661140 [GRCh38]
Chr21:15499647..48081052 [GRCh37]
Chr21:14421518..46905480 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46661140)x3 copy number gain See cases [RCV000053067] Chr21:7749532..46661140 [GRCh38]
Chr21:15499847..48081052 [GRCh37]
Chr21:14421718..46905480 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46670405)x3 copy number gain See cases [RCV000053068] Chr21:7749532..46670405 [GRCh38]
Chr21:20655360..48090317 [GRCh37]
Chr21:19577231..46914745 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46670405)x3 copy number gain See cases [RCV000053069] Chr21:7749532..46670405 [GRCh38]
Chr21:34423268..48090317 [GRCh37]
Chr21:33345138..46914745 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46623792)x3 copy number gain See cases [RCV000053039] Chr21:7749532..46623792 [GRCh38]
Chr21:14524963..48043704 [GRCh37]
Chr21:13446834..46868132 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46653090)x3 copy number gain See cases [RCV000053040] Chr21:7749532..46653090 [GRCh38]
Chr21:14539679..48073002 [GRCh37]
Chr21:13461550..46897430 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh37/hg19 21q22.13-22.2(chr21:37839410..41427526) copy number loss DYRK1A-related intellectual disability syndrome [RCV000190476] Chr21:37839410..41427526 [GRCh37]
Chr21:21q22.13-22.2
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-42971047)x3 copy number gain See cases [RCV000133676] Chr21:7749532..42971047 [GRCh38]
Chr21:15499847..44391157 [GRCh37]
Chr21:14421718..43264226 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46653084)x3 copy number gain See cases [RCV000134727] Chr21:7749532..46653084 [GRCh38]
Chr21:15485038..48072996 [GRCh37]
Chr21:14406909..46897424 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21q11.2-22.3(chr21:7749532-46649831)x3 copy number gain See cases [RCV000134509] Chr21:7749532..46649831 [GRCh38]
Chr21:14577835..48069743 [GRCh37]
Chr21:13499706..46894171 [NCBI36]
Chr21:21q11.2-22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46670440)x3 copy number gain See cases [RCV000134119] Chr21:7749532..46670440 [GRCh38]
Chr21:15485038..48090352 [GRCh37]
Chr21:14406909..46914780 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21q22.11-22.3(chr21:7749532-46670346)x3 copy number gain See cases [RCV000135310] Chr21:7749532..46670346 [GRCh38]
Chr21:34111831..48090258 [GRCh37]
Chr21:33033702..46914686 [NCBI36]
Chr21:21q22.11-22.3
pathogenic
GRCh38/hg38 21q22.12-22.3(chr21:36206067-46670405)x3 copy number gain See cases [RCV000134972] Chr21:36206067..46670405 [GRCh38]
Chr21:37578365..48090317 [GRCh37]
Chr21:36500235..46914745 [NCBI36]
Chr21:21q22.12-22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46664250)x3 copy number gain See cases [RCV000134836] Chr21:7749532..46664250 [GRCh38]
Chr21:15485038..48084162 [GRCh37]
Chr21:14406909..46908590 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46670440)x3 copy number gain See cases [RCV000134842] Chr21:7749532..46670440 [GRCh38]
Chr21:15513244..48090352 [GRCh37]
Chr21:14435115..46914780 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46660999)x3 copy number gain See cases [RCV000135448] Chr21:7749532..46660999 [GRCh38]
Chr21:15499847..48080911 [GRCh37]
Chr21:14421718..46905339 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21q22.12-22.2(chr21:35543872-39993338)x1 copy number loss See cases [RCV000135412] Chr21:35543872..39993338 [GRCh38]
Chr21:36916169..41365265 [GRCh37]
Chr21:35838039..40287135 [NCBI36]
Chr21:21q22.12-22.2
pathogenic
GRCh38/hg38 21q22.13-22.3(chr21:36519173-46670405)x3 copy number gain See cases [RCV000136142] Chr21:36519173..46670405 [GRCh38]
Chr21:37891471..48090317 [GRCh37]
Chr21:36813341..46914745 [NCBI36]
Chr21:21q22.13-22.3
pathogenic
GRCh38/hg38 21q22.12-22.3(chr21:34789953-46636538)x1 copy number loss See cases [RCV000136828] Chr21:34789953..46636538 [GRCh38]
Chr21:36162250..48056450 [GRCh37]
Chr21:35084120..46880878 [NCBI36]
Chr21:21q22.12-22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46671060)x3 copy number gain See cases [RCV000137255] Chr21:7749532..46671060 [GRCh38]
Chr21:35319225..48090972 [GRCh37]
Chr21:34241095..46915400 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46671060)x3 copy number gain See cases [RCV000137337] Chr21:7749532..46671060 [GRCh38]
Chr21:10697897..48090972 [GRCh37]
Chr21:1..46915400 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46671060)x3 copy number gain See cases [RCV000138216] Chr21:7749532..46671060 [GRCh38]
Chr21:10944001..48090972 [GRCh37]
Chr21:9965872..46915400 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21q22.13-22.3(chr21:37669628-46671060)x1 copy number loss See cases [RCV000138096] Chr21:37669628..46671060 [GRCh38]
Chr21:39041930..48090972 [GRCh37]
Chr21:37963800..46915400 [NCBI36]
Chr21:21q22.13-22.3
pathogenic
GRCh38/hg38 21q22.12-22.3(chr21:36066991-46671060)x3 copy number gain See cases [RCV000138164] Chr21:36066991..46671060 [GRCh38]
Chr21:37439289..48090972 [GRCh37]
Chr21:36361159..46915400 [NCBI36]
Chr21:21q22.12-22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46671060)x3 copy number gain See cases [RCV000138436] Chr21:7749532..46671060 [GRCh38]
Chr21:15451032..48090972 [GRCh37]
Chr21:14372903..46915400 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic|conflicting data from submitters
GRCh38/hg38 21q11.2-22.3(chr21:7749532-46670346)x3 copy number gain See cases [RCV000140103] Chr21:7749532..46670346 [GRCh38]
Chr21:14577894..48090258 [GRCh37]
Chr21:13499765..46914686 [NCBI36]
Chr21:21q11.2-22.3
pathogenic
GRCh38/hg38 21q11.2-22.3(chr21:7749532-46698247)x3 copy number gain See cases [RCV000141346] Chr21:7749532..46698247 [GRCh38]
Chr21:14577835..48118159 [GRCh37]
Chr21:13499706..46942587 [NCBI36]
Chr21:21q11.2-22.3
pathogenic
GRCh38/hg38 21q21.3-22.3(chr21:7749532-46677460)x3 copy number gain See cases [RCV000141827] Chr21:7749532..46677460 [GRCh38]
Chr21:28285299..48097372 [GRCh37]
Chr21:27207170..46921800 [NCBI36]
Chr21:21q21.3-22.3
uncertain significance
GRCh38/hg38 21q22.2-22.3(chr21:38816399-46677460)x1 copy number loss See cases [RCV000142311] Chr21:38816399..46677460 [GRCh38]
Chr21:40188323..48097372 [GRCh37]
Chr21:39110193..46921800 [NCBI36]
Chr21:21q22.2-22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7817158-46670440)x1 copy number loss See cases [RCV000142427] Chr21:7817158..46670440 [GRCh38]
Chr21:15485038..48090352 [GRCh37]
Chr21:14406909..46914780 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh38/hg38 21q22.2-22.3(chr21:39375937-44246148)x1 copy number loss See cases [RCV000142650] Chr21:39375937..44246148 [GRCh38]
Chr21:40747863..45666031 [GRCh37]
Chr21:39669733..44490459 [NCBI36]
Chr21:21q22.2-22.3
pathogenic
GRCh38/hg38 21q11.2-22.3(chr21:7749532-46677460)x3 copy number gain See cases [RCV000143376] Chr21:7749532..46677460 [GRCh38]
Chr21:15006458..48097372 [GRCh37]
Chr21:13928329..46921800 [NCBI36]
Chr21:21q11.2-22.3
pathogenic
GRCh38/hg38 21q11.2-22.3(chr21:7749532-46677460) copy number gain See cases [RCV000143160] Chr21:7749532..46677460 [GRCh38]
Chr21:14386013..48097372 [GRCh37]
Chr21:13307884..46921800 [NCBI36]
Chr21:21q11.2-22.3
pathogenic
GRCh38/hg38 21q11.2-22.3(chr21:7749532-46677460)x3 copy number gain See cases [RCV000143120] Chr21:7749532..46677460 [GRCh38]
Chr21:15006457..48097372 [GRCh37]
Chr21:13928328..46921800 [NCBI36]
Chr21:21q11.2-22.3
pathogenic
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46670405)x3 copy number gain See cases [RCV000148131] Chr21:7749532..46670405 [GRCh38]
Chr21:15499847..48090317 [GRCh37]
Chr21:14421718..46914745 [NCBI36]
Chr21:21p11.2-q22.3
pathogenic
GRCh37/hg19 21q11.2-22.3(chr21:15538655-48080926)x1 copy number loss See cases [RCV000239948] Chr21:15538655..48080926 [GRCh37]
Chr21:21q11.2-22.3
pathogenic
GRCh37/hg19 21q22.2-22.3(chr21:39841248-44652723)x3 copy number gain See cases [RCV000239953] Chr21:39841248..44652723 [GRCh37]
Chr21:21q22.2-22.3
pathogenic
GRCh37/hg19 21q11.2-22.3(chr21:15410701-48090317)x3 copy number gain See cases [RCV000240397] Chr21:15410701..48090317 [GRCh37]
Chr21:21q11.2-22.3
pathogenic
GRCh37/hg19 21q22.13-22.2(chr21:38176362-41901945)x1 copy number loss See cases [RCV000449183] Chr21:38176362..41901945 [GRCh37]
Chr21:21q22.13-22.2
pathogenic
GRCh37/hg19 21q11.2-22.3(chr21:15006457-43598570)x3 copy number gain See cases [RCV000446716] Chr21:15006457..43598570 [GRCh37]
Chr21:21q11.2-22.3
pathogenic
GRCh37/hg19 21q22.13-22.3(chr21:38790552-43619940)x1 copy number loss See cases [RCV000446516] Chr21:38790552..43619940 [GRCh37]
Chr21:21q22.13-22.3
pathogenic
GRCh37/hg19 21q11.2-22.3(chr21:14771770-48080867)x3 copy number gain See cases [RCV000447884] Chr21:14771770..48080867 [GRCh37]
Chr21:21q11.2-22.3
pathogenic
GRCh37/hg19 21q11.2-22.3(chr21:15006457-44827632)x3 copy number gain See cases [RCV000448199] Chr21:15006457..44827632 [GRCh37]
Chr21:21q11.2-22.3
pathogenic
GRCh37/hg19 21q11.2-22.3(chr21:15285841-48097372)x3 copy number gain See cases [RCV000447729] Chr21:15285841..48097372 [GRCh37]
Chr21:21q11.2-22.3
pathogenic
GRCh37/hg19 21q11.2-22.3(chr21:15006457-48097372)x3 copy number gain See cases [RCV000447749] Chr21:15006457..48097372 [GRCh37]
Chr21:21q11.2-22.3
pathogenic
GRCh37/hg19 21q22.13-22.3(chr21:38699545-48097372)x1 copy number loss See cases [RCV000510684] Chr21:38699545..48097372 [GRCh37]
Chr21:21q22.13-22.3
pathogenic
GRCh37/hg19 21q11.2-22.3(chr21:15006458-48097372) copy number gain See cases [RCV000511589] Chr21:15006458..48097372 [GRCh37]
Chr21:21q11.2-22.3
pathogenic
GRCh37/hg19 21q22.13-22.3(chr21:37914123-48097372)x1 copy number loss See cases [RCV000510798] Chr21:37914123..48097372 [GRCh37]
Chr21:21q22.13-22.3
pathogenic
GRCh37/hg19 21q22.12-22.2(chr21:36183329-42311538)x3 copy number gain See cases [RCV000512585] Chr21:36183329..42311538 [GRCh37]
Chr21:21q22.12-22.2
likely pathogenic
GRCh37/hg19 21q22.2(chr21:40039202-41278694)x1 copy number loss not provided [RCV000684157] Chr21:40039202..41278694 [GRCh37]
Chr21:21q22.2
uncertain significance
GRCh37/hg19 21q22.11-22.2(chr21:33980213-42542987)x3 copy number gain not provided [RCV000684166] Chr21:33980213..42542987 [GRCh37]
Chr21:21q22.11-22.2
pathogenic
NC_000021.9:g.(?_38981673)_(41568791_?)del deletion Autism [RCV000754228] Chr21:38981673..41568791 [GRCh38]
Chr21:21q22.2-22.3
likely pathogenic
GRCh37/hg19 21p11.2-q22.3(chr21:10824040-48090629)x3 copy number gain not provided [RCV000741418] Chr21:10824040..48090629 [GRCh37]
Chr21:21p11.2-q22.3
pathogenic
GRCh37/hg19 21p11.2-q22.3(chr21:10827533-48100155)x3 copy number gain not provided [RCV000741419] Chr21:10827533..48100155 [GRCh37]
Chr21:21p11.2-q22.3
pathogenic
GRCh37/hg19 21q22.2-22.3(chr21:40364245-44169928)x1 copy number loss not provided [RCV000741567] Chr21:40364245..44169928 [GRCh37]
Chr21:21q22.2-22.3
pathogenic
GRCh37/hg19 21p11.2-q22.3(chr21:10699330-48117896)x3 copy number gain not provided [RCV000741413] Chr21:10699330..48117896 [GRCh37]
Chr21:21p11.2-q22.3
pathogenic
GRCh37/hg19 21p11.2-q22.3(chr21:10704198-48117896)x3 copy number gain not provided [RCV000741415] Chr21:10704198..48117896 [GRCh37]
Chr21:21p11.2-q22.3
pathogenic
GRCh37/hg19 21q22.2(chr21:40726882-41265009)x3 copy number gain not provided [RCV000849872] Chr21:40726882..41265009 [GRCh37]
Chr21:21q22.2
uncertain significance
GRCh37/hg19 21q22.2(chr21:40726882-41265009)x3 copy number gain not provided [RCV000849873] Chr21:40726882..41265009 [GRCh37]
Chr21:21q22.2
uncertain significance
GRCh37/hg19 21q11.2-22.3(chr21:15006457-48097372)x3 copy number gain not provided [RCV000846937] Chr21:15006457..48097372 [GRCh37]
Chr21:21q11.2-22.3
pathogenic
GRCh37/hg19 21q22.13-22.3(chr21:39410438-45171756)x1 copy number loss not provided [RCV001007132] Chr21:39410438..45171756 [GRCh37]
Chr21:21q22.13-22.3
pathogenic
GRCh37/hg19 21q22.2(chr21:40067081-40841948)x3 copy number gain not provided [RCV000848786] Chr21:40067081..40841948 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_004627.6(GET1):c.266A>G (p.His89Arg) single nucleotide variant not specified [RCV004299632] Chr21:39390861 [GRCh38]
Chr21:40762787 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.545A>G (p.His182Arg) single nucleotide variant not specified [RCV004292354] Chr21:39423268 [GRCh38]
Chr21:40795194 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.994G>C (p.Glu332Gln) single nucleotide variant not specified [RCV004316650] Chr21:39411784 [GRCh38]
Chr21:40783710 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.45C>A (p.Phe15Leu) single nucleotide variant not specified [RCV004289331] Chr21:39428449 [GRCh38]
Chr21:40800375 [GRCh37]
Chr21:21q22.2
uncertain significance
GRCh37/hg19 21q11.2-22.3(chr21:14420615-48080926)x3 copy number gain Complete trisomy 21 syndrome [RCV002284306] Chr21:14420615..48080926 [GRCh37]
Chr21:21q11.2-22.3
pathogenic
GRCh37/hg19 21q22.13-22.2(chr21:39270345-41091831)x1 copy number loss not provided [RCV001259411] Chr21:39270345..41091831 [GRCh37]
Chr21:21q22.13-22.2
uncertain significance
GRCh37/hg19 21q11.2-22.3(chr21:14629063-48090317)x3 copy number gain See cases [RCV001263025] Chr21:14629063..48090317 [GRCh37]
Chr21:21q11.2-22.3
pathogenic
GRCh37/hg19 21p13-q22.3(chr21:1-48129895)x3 copy number gain See cases [RCV001780078] Chr21:1..48129895 [GRCh37]
Chr21:21p13-q22.3
pathogenic
GRCh37/hg19 21q11.2-22.3(chr21:15006457-48097372) copy number gain not specified [RCV002052723] Chr21:15006457..48097372 [GRCh37]
Chr21:21q11.2-22.3
pathogenic
GRCh37/hg19 21q11.2-22.3(chr21:15285841-48097372) copy number gain not specified [RCV002052725] Chr21:15285841..48097372 [GRCh37]
Chr21:21q11.2-22.3
pathogenic
GRCh37/hg19 21q11.2-22.3(chr21:15006457-48097372)x3 copy number gain not provided [RCV001829203] Chr21:15006457..48097372 [GRCh37]
Chr21:21q11.2-22.3
pathogenic
GRCh37/hg19 21q11.2-22.3(chr21:15041209-48097372) copy number gain not specified [RCV002052724] Chr21:15041209..48097372 [GRCh37]
Chr21:21q11.2-22.3
pathogenic
GRCh37/hg19 21q22.2(chr21:39892114-40905632)x1 copy number loss not provided [RCV001836600] Chr21:39892114..40905632 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.1630G>A (p.Ala544Thr) single nucleotide variant not specified [RCV004329590] Chr21:39406265 [GRCh38]
Chr21:40778191 [GRCh37]
Chr21:21q22.2
uncertain significance
GRCh37/hg19 21q22.2(chr21:40219284-41569839)x3 copy number gain not provided [RCV002472434] Chr21:40219284..41569839 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.38A>C (p.Glu13Ala) single nucleotide variant not specified [RCV004117348] Chr21:39428456 [GRCh38]
Chr21:40800382 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.1202A>G (p.Lys401Arg) single nucleotide variant not specified [RCV004187174] Chr21:39410059 [GRCh38]
Chr21:40781985 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.1936G>A (p.Gly646Arg) single nucleotide variant not specified [RCV004111175] Chr21:39405959 [GRCh38]
Chr21:40777885 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.632G>C (p.Arg211Thr) single nucleotide variant not specified [RCV004188355] Chr21:39423181 [GRCh38]
Chr21:40795107 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.1151C>G (p.Pro384Arg) single nucleotide variant not specified [RCV004182143] Chr21:39410277 [GRCh38]
Chr21:40782203 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.784C>G (p.His262Asp) single nucleotide variant not specified [RCV004084370] Chr21:39423029 [GRCh38]
Chr21:40794955 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.118C>T (p.Arg40Trp) single nucleotide variant not specified [RCV004163095] Chr21:39428376 [GRCh38]
Chr21:40800302 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.1193A>C (p.His398Pro) single nucleotide variant not specified [RCV004245495] Chr21:39410068 [GRCh38]
Chr21:40781994 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.764C>G (p.Ala255Gly) single nucleotide variant not specified [RCV004102664] Chr21:39423049 [GRCh38]
Chr21:40794975 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.1796T>C (p.Met599Thr) single nucleotide variant not specified [RCV004201028] Chr21:39406099 [GRCh38]
Chr21:40778025 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.1502G>C (p.Gly501Ala) single nucleotide variant not specified [RCV004224102] Chr21:39406393 [GRCh38]
Chr21:40778319 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.1470A>C (p.Arg490Ser) single nucleotide variant not specified [RCV004167087] Chr21:39406425 [GRCh38]
Chr21:40778351 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.1985C>T (p.Thr662Ile) single nucleotide variant not specified [RCV004169762] Chr21:39405910 [GRCh38]
Chr21:40777836 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.1541C>T (p.Thr514Met) single nucleotide variant not specified [RCV004180561] Chr21:39406354 [GRCh38]
Chr21:40778280 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.1337G>C (p.Gly446Ala) single nucleotide variant not specified [RCV004199445] Chr21:39406558 [GRCh38]
Chr21:40778484 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.425G>A (p.Arg142Gln) single nucleotide variant not specified [RCV004086518] Chr21:39423388 [GRCh38]
Chr21:40795314 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.957C>A (p.His319Gln) single nucleotide variant not specified [RCV004174019] Chr21:39420724 [GRCh38]
Chr21:40792650 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.974A>T (p.Lys325Met) single nucleotide variant not specified [RCV004277205] Chr21:39420707 [GRCh38]
Chr21:40792633 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.1882A>G (p.Ser628Gly) single nucleotide variant not specified [RCV004260119] Chr21:39406013 [GRCh38]
Chr21:40777939 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.1175C>T (p.Ala392Val) single nucleotide variant not specified [RCV004280150] Chr21:39410086 [GRCh38]
Chr21:40782012 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.1174G>A (p.Ala392Thr) single nucleotide variant not specified [RCV004280149] Chr21:39410087 [GRCh38]
Chr21:40782013 [GRCh37]
Chr21:21q22.2
likely benign
NM_152505.4(LCA5L):c.274G>C (p.Glu92Gln) single nucleotide variant not specified [RCV004325788] Chr21:39428220 [GRCh38]
Chr21:40800146 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_004627.6(GET1):c.422G>A (p.Arg141His) single nucleotide variant not specified [RCV004334293] Chr21:39393251 [GRCh38]
Chr21:40765177 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_004627.6(GET1):c.299T>G (p.Ile100Arg) single nucleotide variant not specified [RCV004334327] Chr21:39391799 [GRCh38]
Chr21:40763725 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_004627.6(GET1):c.391G>A (p.Val131Met) single nucleotide variant not specified [RCV004338218] Chr21:39393220 [GRCh38]
Chr21:40765146 [GRCh37]
Chr21:21q22.2
uncertain significance
GRCh37/hg19 21q22.2-22.3(chr21:40681179-48097372)x1 copy number loss not provided [RCV003483381] Chr21:40681179..48097372 [GRCh37]
Chr21:21q22.2-22.3
pathogenic
GRCh37/hg19 21q11.2-22.3(chr21:15006458-45674637)x3 copy number gain not provided [RCV003485218] Chr21:15006458..45674637 [GRCh37]
Chr21:21q11.2-22.3
pathogenic
GRCh37/hg19 21q22.11-22.3(chr21:33015681-48097372)x3 copy number gain not provided [RCV003485222] Chr21:33015681..48097372 [GRCh37]
Chr21:21q22.11-22.3
pathogenic
NM_152505.4(LCA5L):c.1863C>G (p.Gly621=) single nucleotide variant not provided [RCV003431499] Chr21:39406032 [GRCh38]
Chr21:40777958 [GRCh37]
Chr21:21q22.2
likely benign
NM_152505.4(LCA5L):c.1722T>C (p.Tyr574=) single nucleotide variant not provided [RCV003431500] Chr21:39406173 [GRCh38]
Chr21:40778099 [GRCh37]
Chr21:21q22.2
likely benign
NM_152505.4(LCA5L):c.1536C>G (p.Pro512=) single nucleotide variant not provided [RCV003431501] Chr21:39406359 [GRCh38]
Chr21:40778285 [GRCh37]
Chr21:21q22.2
likely benign
GRCh37/hg19 21q22.12-22.3(chr21:35872675-48097372)x1 copy number loss not specified [RCV003986157] Chr21:35872675..48097372 [GRCh37]
Chr21:21q22.12-22.3
pathogenic
GRCh37/hg19 21q21.3-22.3(chr21:26929299-48097372)x3 copy number gain not specified [RCV003986152] Chr21:26929299..48097372 [GRCh37]
Chr21:21q21.3-22.3
pathogenic
GRCh37/hg19 21q11.2-22.3(chr21:15023401-48097372)x3 copy number gain not specified [RCV003986160] Chr21:15023401..48097372 [GRCh37]
Chr21:21q11.2-22.3
pathogenic
GRCh37/hg19 21q22.11-22.3(chr21:34092685-48097372)x3 copy number gain not specified [RCV003986158] Chr21:34092685..48097372 [GRCh37]
Chr21:21q22.11-22.3
pathogenic
GRCh37/hg19 21q21.3-22.3(chr21:30685776-48097372)x3 copy number gain not specified [RCV003986149] Chr21:30685776..48097372 [GRCh37]
Chr21:21q21.3-22.3
pathogenic
NM_004627.6(GET1):c.166A>G (p.Met56Val) single nucleotide variant not specified [RCV004387755] Chr21:39390761 [GRCh38]
Chr21:40762687 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_004627.6(GET1):c.257T>G (p.Leu86Arg) single nucleotide variant not specified [RCV004387758] Chr21:39390852 [GRCh38]
Chr21:40762778 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_004627.6(GET1):c.128C>T (p.Ala43Val) single nucleotide variant not specified [RCV004387753] Chr21:39390723 [GRCh38]
Chr21:40762649 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_004627.6(GET1):c.171G>T (p.Lys57Asn) single nucleotide variant not specified [RCV004387756] Chr21:39390766 [GRCh38]
Chr21:40762692 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_004627.6(GET1):c.421C>T (p.Arg141Cys) single nucleotide variant not specified [RCV004387761] Chr21:39393250 [GRCh38]
Chr21:40765176 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_004627.6(GET1):c.277C>T (p.Arg93Trp) single nucleotide variant not specified [RCV004387759] Chr21:39391777 [GRCh38]
Chr21:40763703 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_004627.6(GET1):c.5G>C (p.Ser2Thr) single nucleotide variant not specified [RCV004387762] Chr21:39380389 [GRCh38]
Chr21:40752315 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_004627.6(GET1):c.11C>T (p.Ala4Val) single nucleotide variant not specified [RCV004387752] Chr21:39380395 [GRCh38]
Chr21:40752321 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_004627.6(GET1):c.65A>G (p.Asn22Ser) single nucleotide variant not specified [RCV004387763] Chr21:39380449 [GRCh38]
Chr21:40752375 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.101G>A (p.Gly34Asp) single nucleotide variant not specified [RCV004410325] Chr21:39428393 [GRCh38]
Chr21:40800319 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.1258G>A (p.Glu420Lys) single nucleotide variant not specified [RCV004410326] Chr21:39410003 [GRCh38]
Chr21:40781929 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.1585G>C (p.Ala529Pro) single nucleotide variant not specified [RCV004410327] Chr21:39406310 [GRCh38]
Chr21:40778236 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.160T>G (p.Ser54Ala) single nucleotide variant not specified [RCV004410328] Chr21:39428334 [GRCh38]
Chr21:40800260 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.290A>G (p.Lys97Arg) single nucleotide variant not specified [RCV004410329] Chr21:39428204 [GRCh38]
Chr21:40800130 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.293A>G (p.Tyr98Cys) single nucleotide variant not specified [RCV004410330] Chr21:39428201 [GRCh38]
Chr21:40800127 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.676A>T (p.Arg226Trp) single nucleotide variant not specified [RCV004410331] Chr21:39423137 [GRCh38]
Chr21:40795063 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.806C>T (p.Thr269Ile) single nucleotide variant not specified [RCV004410332] Chr21:39423007 [GRCh38]
Chr21:40794933 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_152505.4(LCA5L):c.955C>T (p.His319Tyr) single nucleotide variant not specified [RCV004412403] Chr21:39420726 [GRCh38]
Chr21:40792652 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_004627.6(GET1):c.136G>C (p.Glu46Gln) single nucleotide variant not specified [RCV004387754] Chr21:39390731 [GRCh38]
Chr21:40762657 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_004627.6(GET1):c.202G>A (p.Glu68Lys) single nucleotide variant not specified [RCV004387757] Chr21:39390797 [GRCh38]
Chr21:40762723 [GRCh37]
Chr21:21q22.2
uncertain significance
NM_004627.6(GET1):c.376G>A (p.Val126Ile) single nucleotide variant not specified [RCV004387760] Chr21:39393205 [GRCh38]
Chr21:40765131 [GRCh37]
Chr21:21q22.2
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2176
Count of miRNA genes:988
Interacting mature miRNAs:1189
Transcripts:ENST00000333781, ENST00000380708, ENST00000380713, ENST00000398753, ENST00000415847, ENST00000442773, ENST00000466787, ENST00000471468, ENST00000476914, ENST00000478273, ENST00000480690, ENST00000487869, ENST00000490860, ENST00000541890
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
D21S1412  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371122,110,660 - 22,111,551UniSTSGRCh37
GRCh372140,750,288 - 40,750,717UniSTSGRCh37
Celera2125,947,976 - 25,948,405UniSTS
Celera1122,243,702 - 22,244,593UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map21q22.3UniSTS
HuRef2126,219,072 - 26,219,489UniSTS
HuRef1093,771,754 - 93,772,311UniSTS
Marshfield Genetic Map2140.47RGD
Marshfield Genetic Map2140.47UniSTS
RH65241  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,769,346 - 40,769,504UniSTSGRCh37
GRCh371230,696,617 - 30,696,771UniSTSGRCh37
Build 361230,587,884 - 30,588,038RGDNCBI36
Celera2125,967,034 - 25,967,192UniSTS
Celera1235,839,445 - 35,839,599RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,238,086 - 26,238,244UniSTS
HuRef1230,461,870 - 30,462,024UniSTS
ECD00266  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,752,609 - 40,753,526UniSTSGRCh37
Build 362139,674,479 - 39,675,396RGDNCBI36
Celera2125,950,297 - 25,951,214RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,221,381 - 26,222,298UniSTS
ECD00321  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,764,413 - 40,765,326UniSTSGRCh37
Build 362139,686,283 - 39,687,196RGDNCBI36
Celera2125,962,102 - 25,963,016RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,233,186 - 26,234,100UniSTS
ECD01307  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,751,657 - 40,752,526UniSTSGRCh37
Build 362139,673,527 - 39,674,396RGDNCBI36
Celera2125,949,345 - 25,950,214RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,220,429 - 26,221,298UniSTS
ECD02297  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,768,663 - 40,769,497UniSTSGRCh37
Build 362139,690,533 - 39,691,367RGDNCBI36
Celera2125,966,351 - 25,967,185RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,237,403 - 26,238,237UniSTS
ECD02355  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,763,517 - 40,764,349UniSTSGRCh37
Build 362139,685,387 - 39,686,219RGDNCBI36
Celera2125,961,206 - 25,962,038RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,232,290 - 26,233,122UniSTS
ECD03939  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,762,585 - 40,763,364UniSTSGRCh37
Build 362139,684,455 - 39,685,234RGDNCBI36
Celera2125,960,274 - 25,961,053RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,231,358 - 26,232,137UniSTS
ECD07345  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,756,684 - 40,757,367UniSTSGRCh37
Build 362139,678,554 - 39,679,237RGDNCBI36
Celera2125,954,372 - 25,955,055RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,225,455 - 26,226,138UniSTS
ECD08714  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,757,403 - 40,758,050UniSTSGRCh37
Build 362139,679,273 - 39,679,920RGDNCBI36
Celera2125,955,091 - 25,955,738RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,226,174 - 26,226,821UniSTS
ECD09164  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,758,108 - 40,758,743UniSTSGRCh37
Build 362139,679,978 - 39,680,613RGDNCBI36
Celera2125,955,796 - 25,956,431RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,226,879 - 26,227,514UniSTS
ECD10218  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,759,158 - 40,759,765UniSTSGRCh37
Build 362139,681,028 - 39,681,635RGDNCBI36
Celera2125,956,847 - 25,957,454RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,227,930 - 26,228,538UniSTS
ECD15406  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,760,506 - 40,760,976UniSTSGRCh37
Build 362139,682,376 - 39,682,846RGDNCBI36
Celera2125,958,195 - 25,958,665RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,229,279 - 26,229,749UniSTS
ECD16262  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,761,480 - 40,761,927UniSTSGRCh37
Build 362139,683,350 - 39,683,797RGDNCBI36
Celera2125,959,169 - 25,959,616RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,230,253 - 26,230,700UniSTS
ECD17298  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,767,590 - 40,767,994UniSTSGRCh37
Build 362139,689,460 - 39,689,864RGDNCBI36
Celera2125,965,279 - 25,965,683RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,236,331 - 26,236,735UniSTS
REN20346  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,750,726 - 40,750,979UniSTSGRCh37
Build 362139,672,596 - 39,672,849RGDNCBI36
Celera2125,948,414 - 25,948,667RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,219,498 - 26,219,751UniSTS
REN20347  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,750,955 - 40,751,209UniSTSGRCh37
Build 362139,672,825 - 39,673,079RGDNCBI36
Celera2125,948,643 - 25,948,897RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,219,727 - 26,219,981UniSTS
REN20348  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,751,267 - 40,751,530UniSTSGRCh37
Build 362139,673,137 - 39,673,400RGDNCBI36
Celera2125,948,955 - 25,949,218RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,220,039 - 26,220,302UniSTS
REN20349  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,751,295 - 40,751,531UniSTSGRCh37
Build 362139,673,165 - 39,673,401RGDNCBI36
Celera2125,948,983 - 25,949,219RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,220,067 - 26,220,303UniSTS
REN20350  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,751,630 - 40,751,856UniSTSGRCh37
Build 362139,673,500 - 39,673,726RGDNCBI36
Celera2125,949,318 - 25,949,544RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,220,402 - 26,220,628UniSTS
REN20351  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,751,826 - 40,752,073UniSTSGRCh37
Build 362139,673,696 - 39,673,943RGDNCBI36
Celera2125,949,514 - 25,949,761RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,220,598 - 26,220,845UniSTS
REN20352  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,752,046 - 40,752,270UniSTSGRCh37
Build 362139,673,916 - 39,674,140RGDNCBI36
Celera2125,949,734 - 25,949,958RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,220,818 - 26,221,042UniSTS
REN20353  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,752,118 - 40,752,385UniSTSGRCh37
Build 362139,673,988 - 39,674,255RGDNCBI36
Celera2125,949,806 - 25,950,073RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,220,890 - 26,221,157UniSTS
REN20354  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,752,371 - 40,752,615UniSTSGRCh37
Build 362139,674,241 - 39,674,485RGDNCBI36
Celera2125,950,059 - 25,950,303RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,221,143 - 26,221,387UniSTS
REN20355  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,752,588 - 40,752,844UniSTSGRCh37
Build 362139,674,458 - 39,674,714RGDNCBI36
Celera2125,950,276 - 25,950,532RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,221,360 - 26,221,616UniSTS
REN20356  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,752,825 - 40,753,061UniSTSGRCh37
Build 362139,674,695 - 39,674,931RGDNCBI36
Celera2125,950,513 - 25,950,749RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,221,597 - 26,221,833UniSTS
REN20357  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,753,047 - 40,753,300UniSTSGRCh37
Build 362139,674,917 - 39,675,170RGDNCBI36
Celera2125,950,735 - 25,950,988RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,221,819 - 26,222,072UniSTS
REN20358  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,753,285 - 40,753,549UniSTSGRCh37
Build 362139,675,155 - 39,675,419RGDNCBI36
Celera2125,950,973 - 25,951,237RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,222,057 - 26,222,321UniSTS
REN20359  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,753,509 - 40,753,747UniSTSGRCh37
Build 362139,675,379 - 39,675,617RGDNCBI36
Celera2125,951,197 - 25,951,435RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,222,281 - 26,222,519UniSTS
REN20360  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,753,898 - 40,754,138UniSTSGRCh37
Build 362139,675,768 - 39,676,008RGDNCBI36
Celera2125,951,586 - 25,951,826RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,222,670 - 26,222,910UniSTS
REN20361  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,754,114 - 40,754,361UniSTSGRCh37
Build 362139,675,984 - 39,676,231RGDNCBI36
Celera2125,951,802 - 25,952,049RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,222,886 - 26,223,133UniSTS
REN20362  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,754,336 - 40,754,603UniSTSGRCh37
Build 362139,676,206 - 39,676,473RGDNCBI36
Celera2125,952,024 - 25,952,291RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,223,108 - 26,223,375UniSTS
REN20363  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,754,507 - 40,754,735UniSTSGRCh37
Build 362139,676,377 - 39,676,605RGDNCBI36
Celera2125,952,195 - 25,952,423RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,223,279 - 26,223,507UniSTS
REN20364  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,756,578 - 40,756,811UniSTSGRCh37
Build 362139,678,448 - 39,678,681RGDNCBI36
Celera2125,954,266 - 25,954,499RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,225,349 - 26,225,582UniSTS
REN20365  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,756,785 - 40,757,036UniSTSGRCh37
Build 362139,678,655 - 39,678,906RGDNCBI36
Celera2125,954,473 - 25,954,724RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,225,556 - 26,225,807UniSTS
REN20366  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,756,986 - 40,757,210UniSTSGRCh37
Build 362139,678,856 - 39,679,080RGDNCBI36
Celera2125,954,674 - 25,954,898RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,225,757 - 26,225,981UniSTS
REN20367  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,757,200 - 40,757,468UniSTSGRCh37
Build 362139,679,070 - 39,679,338RGDNCBI36
Celera2125,954,888 - 25,955,156RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,225,971 - 26,226,239UniSTS
REN20368  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,757,464 - 40,757,717UniSTSGRCh37
Build 362139,679,334 - 39,679,587RGDNCBI36
Celera2125,955,152 - 25,955,405RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,226,235 - 26,226,488UniSTS
REN20369  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,757,697 - 40,757,946UniSTSGRCh37
Build 362139,679,567 - 39,679,816RGDNCBI36
Celera2125,955,385 - 25,955,634RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,226,468 - 26,226,717UniSTS
REN20370  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,757,905 - 40,758,167UniSTSGRCh37
Build 362139,679,775 - 39,680,037RGDNCBI36
Celera2125,955,593 - 25,955,855RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,226,676 - 26,226,938UniSTS
REN20371  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,758,115 - 40,758,346UniSTSGRCh37
Build 362139,679,985 - 39,680,216RGDNCBI36
Celera2125,955,803 - 25,956,034RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,226,886 - 26,227,117UniSTS
REN20372  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,758,301 - 40,758,528UniSTSGRCh37
Build 362139,680,171 - 39,680,398RGDNCBI36
Celera2125,955,989 - 25,956,216RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,227,072 - 26,227,299UniSTS
REN20373  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,758,500 - 40,758,745UniSTSGRCh37
Build 362139,680,370 - 39,680,615RGDNCBI36
Celera2125,956,188 - 25,956,433RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,227,271 - 26,227,516UniSTS
REN20374  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,758,606 - 40,758,861UniSTSGRCh37
Build 362139,680,476 - 39,680,731RGDNCBI36
Celera2125,956,294 - 25,956,550RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,227,377 - 26,227,633UniSTS
REN20375  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,758,846 - 40,759,075UniSTSGRCh37
Build 362139,680,716 - 39,680,945RGDNCBI36
Celera2125,956,535 - 25,956,764RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,227,618 - 26,227,847UniSTS
REN20376  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,759,069 - 40,759,327UniSTSGRCh37
Build 362139,680,939 - 39,681,197RGDNCBI36
Celera2125,956,758 - 25,957,016RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,227,841 - 26,228,099UniSTS
REN20377  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,759,303 - 40,759,554UniSTSGRCh37
Build 362139,681,173 - 39,681,424RGDNCBI36
Celera2125,956,992 - 25,957,243RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,228,075 - 26,228,326UniSTS
REN20378  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,759,536 - 40,759,763UniSTSGRCh37
Build 362139,681,406 - 39,681,633RGDNCBI36
Celera2125,957,225 - 25,957,452RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,228,308 - 26,228,536UniSTS
REN20379  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,759,740 - 40,760,005UniSTSGRCh37
Build 362139,681,610 - 39,681,875RGDNCBI36
Celera2125,957,429 - 25,957,694RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,228,513 - 26,228,778UniSTS
REN20380  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,759,978 - 40,760,215UniSTSGRCh37
Build 362139,681,848 - 39,682,085RGDNCBI36
Celera2125,957,667 - 25,957,904RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,228,751 - 26,228,988UniSTS
REN20381  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,760,189 - 40,760,435UniSTSGRCh37
Build 362139,682,059 - 39,682,305RGDNCBI36
Celera2125,957,878 - 25,958,124RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,228,962 - 26,229,208UniSTS
REN20382  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,760,413 - 40,760,658UniSTSGRCh37
Build 362139,682,283 - 39,682,528RGDNCBI36
Celera2125,958,102 - 25,958,347RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,229,186 - 26,229,431UniSTS
REN20383  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,760,636 - 40,760,906UniSTSGRCh37
Build 362139,682,506 - 39,682,776RGDNCBI36
Celera2125,958,325 - 25,958,595RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,229,409 - 26,229,679UniSTS
REN20384  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,760,746 - 40,760,975UniSTSGRCh37
Build 362139,682,616 - 39,682,845RGDNCBI36
Celera2125,958,435 - 25,958,664RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,229,519 - 26,229,748UniSTS
REN20385  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,760,943 - 40,761,191UniSTSGRCh37
Build 362139,682,813 - 39,683,061RGDNCBI36
Celera2125,958,632 - 25,958,880RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,229,716 - 26,229,964UniSTS
REN20386  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,761,181 - 40,761,430UniSTSGRCh37
Build 362139,683,051 - 39,683,300RGDNCBI36
Celera2125,958,870 - 25,959,119RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,229,954 - 26,230,203UniSTS
REN20387  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,761,407 - 40,761,680UniSTSGRCh37
Build 362139,683,277 - 39,683,550RGDNCBI36
Celera2125,959,096 - 25,959,369RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,230,180 - 26,230,453UniSTS
REN20388  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,761,657 - 40,761,894UniSTSGRCh37
Build 362139,683,527 - 39,683,764RGDNCBI36
Celera2125,959,346 - 25,959,583RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,230,430 - 26,230,667UniSTS
REN20389  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,761,886 - 40,762,138UniSTSGRCh37
Build 362139,683,756 - 39,684,008RGDNCBI36
Celera2125,959,575 - 25,959,827RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,230,659 - 26,230,911UniSTS
REN20390  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,762,116 - 40,762,364UniSTSGRCh37
Build 362139,683,986 - 39,684,234RGDNCBI36
Celera2125,959,805 - 25,960,053RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,230,889 - 26,231,137UniSTS
REN20391  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,762,355 - 40,762,603UniSTSGRCh37
Build 362139,684,225 - 39,684,473RGDNCBI36
Celera2125,960,044 - 25,960,292RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,231,128 - 26,231,376UniSTS
REN20392  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,762,593 - 40,762,844UniSTSGRCh37
Build 362139,684,463 - 39,684,714RGDNCBI36
Celera2125,960,282 - 25,960,533RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,231,366 - 26,231,617UniSTS
REN20393  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,762,813 - 40,763,037UniSTSGRCh37
Build 362139,684,683 - 39,684,907RGDNCBI36
Celera2125,960,502 - 25,960,726RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,231,586 - 26,231,810UniSTS
REN20394  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,762,998 - 40,763,226UniSTSGRCh37
Build 362139,684,868 - 39,685,096RGDNCBI36
Celera2125,960,687 - 25,960,915RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,231,771 - 26,231,999UniSTS
REN20395  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,763,195 - 40,763,457UniSTSGRCh37
Build 362139,685,065 - 39,685,327RGDNCBI36
Celera2125,960,884 - 25,961,146RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,231,968 - 26,232,230UniSTS
REN20396  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,763,381 - 40,763,637UniSTSGRCh37
Build 362139,685,251 - 39,685,507RGDNCBI36
Celera2125,961,070 - 25,961,326RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,232,154 - 26,232,410UniSTS
REN20397  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,763,602 - 40,763,849UniSTSGRCh37
Build 362139,685,472 - 39,685,719RGDNCBI36
Celera2125,961,291 - 25,961,538RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,232,375 - 26,232,622UniSTS
REN20398  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,763,830 - 40,764,070UniSTSGRCh37
Build 362139,685,700 - 39,685,940RGDNCBI36
Celera2125,961,519 - 25,961,759RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,232,603 - 26,232,843UniSTS
REN20399  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,764,061 - 40,764,313UniSTSGRCh37
Build 362139,685,931 - 39,686,183RGDNCBI36
Celera2125,961,750 - 25,962,002RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,232,834 - 26,233,086UniSTS
REN20400  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,764,311 - 40,764,546UniSTSGRCh37
Build 362139,686,181 - 39,686,416RGDNCBI36
Celera2125,962,000 - 25,962,236RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,233,084 - 26,233,320UniSTS
REN20401  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,764,519 - 40,764,762UniSTSGRCh37
Build 362139,686,389 - 39,686,632RGDNCBI36
Celera2125,962,209 - 25,962,452RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,233,293 - 26,233,536UniSTS
REN20402  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,764,739 - 40,764,998UniSTSGRCh37
Build 362139,686,609 - 39,686,868RGDNCBI36
Celera2125,962,429 - 25,962,688RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,233,513 - 26,233,772UniSTS
REN20403  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,764,996 - 40,765,248UniSTSGRCh37
Build 362139,686,866 - 39,687,118RGDNCBI36
Celera2125,962,686 - 25,962,938RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,233,770 - 26,234,022UniSTS
REN20404  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,765,225 - 40,765,482UniSTSGRCh37
Build 362139,687,095 - 39,687,352RGDNCBI36
Celera2125,962,915 - 25,963,172RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,233,999 - 26,234,256UniSTS
REN20405  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,765,350 - 40,765,579UniSTSGRCh37
Build 362139,687,220 - 39,687,449RGDNCBI36
Celera2125,963,040 - 25,963,269RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,234,124 - 26,234,353UniSTS
REN20406  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,766,197 - 40,766,425UniSTSGRCh37
Build 362139,688,067 - 39,688,295RGDNCBI36
Celera2125,963,887 - 25,964,115RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,234,939 - 26,235,167UniSTS
REN20407  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,766,408 - 40,766,676UniSTSGRCh37
Build 362139,688,278 - 39,688,546RGDNCBI36
Celera2125,964,098 - 25,964,366RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,235,150 - 26,235,418UniSTS
REN20408  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,766,635 - 40,766,883UniSTSGRCh37
Build 362139,688,505 - 39,688,753RGDNCBI36
Celera2125,964,325 - 25,964,573RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,235,377 - 26,235,625UniSTS
REN20409  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,766,851 - 40,767,095UniSTSGRCh37
Build 362139,688,721 - 39,688,965RGDNCBI36
Celera2125,964,541 - 25,964,785RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,235,593 - 26,235,837UniSTS
REN20410  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,767,068 - 40,767,292UniSTSGRCh37
Build 362139,688,938 - 39,689,162RGDNCBI36
Celera2125,964,758 - 25,964,982RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,235,810 - 26,236,034UniSTS
REN20411  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,767,225 - 40,767,460UniSTSGRCh37
Build 362139,689,095 - 39,689,330RGDNCBI36
Celera2125,964,915 - 25,965,149RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,235,967 - 26,236,201UniSTS
REN20412  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,767,440 - 40,767,680UniSTSGRCh37
Build 362139,689,310 - 39,689,550RGDNCBI36
Celera2125,965,129 - 25,965,369RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,236,181 - 26,236,421UniSTS
REN20413  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,767,648 - 40,767,907UniSTSGRCh37
Build 362139,689,518 - 39,689,777RGDNCBI36
Celera2125,965,337 - 25,965,596RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,236,389 - 26,236,648UniSTS
REN20414  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,767,884 - 40,768,113UniSTSGRCh37
Build 362139,689,754 - 39,689,983RGDNCBI36
Celera2125,965,573 - 25,965,802RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,236,625 - 26,236,854UniSTS
REN20415  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,767,916 - 40,768,157UniSTSGRCh37
Build 362139,689,786 - 39,690,027RGDNCBI36
Celera2125,965,605 - 25,965,846RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,236,657 - 26,236,898UniSTS
REN20416  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,768,628 - 40,768,854UniSTSGRCh37
Build 362139,690,498 - 39,690,724RGDNCBI36
Celera2125,966,316 - 25,966,542RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,237,368 - 26,237,594UniSTS
REN20417  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,768,828 - 40,769,077UniSTSGRCh37
Build 362139,690,698 - 39,690,947RGDNCBI36
Celera2125,966,516 - 25,966,765RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,237,568 - 26,237,817UniSTS
REN20418  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,768,996 - 40,769,221UniSTSGRCh37
Build 362139,690,866 - 39,691,091RGDNCBI36
Celera2125,966,684 - 25,966,909RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,237,736 - 26,237,961UniSTS
REN20419  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,769,151 - 40,769,414UniSTSGRCh37
Build 362139,691,021 - 39,691,284RGDNCBI36
Celera2125,966,839 - 25,967,102RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,237,891 - 26,238,154UniSTS
REN20420  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,769,391 - 40,769,647UniSTSGRCh37
GRCh371230,696,469 - 30,696,726UniSTSGRCh37
Build 361230,587,736 - 30,587,993RGDNCBI36
Celera2125,967,079 - 25,967,340UniSTS
Celera1235,839,297 - 35,839,554RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,238,131 - 26,238,392UniSTS
HuRef1230,461,722 - 30,461,979UniSTS
REN20421  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,769,628 - 40,769,900UniSTSGRCh37
Build 362139,691,498 - 39,691,770RGDNCBI36
Celera2125,967,321 - 25,967,593RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,238,373 - 26,238,645UniSTS
REN20422  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,769,884 - 40,770,127UniSTSGRCh37
Build 362139,691,754 - 39,691,997RGDNCBI36
Celera2125,967,577 - 25,967,820RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,238,629 - 26,238,872UniSTS
REN20491  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,785,913 - 40,786,144UniSTSGRCh37
Build 362139,707,783 - 39,708,014RGDNCBI36
Celera2125,983,607 - 25,983,838RGD
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map21q22.3UniSTS
HuRef2126,254,759 - 26,254,990UniSTS
SHGC-24182  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,769,505 - 40,769,604UniSTSGRCh37
Build 362139,691,375 - 39,691,474RGDNCBI36
Celera2125,967,193 - 25,967,292RGD
Cytogenetic Map21q22.3UniSTS
HuRef2126,238,245 - 26,238,344UniSTS
GeneMap99-G3 RH Map211311.0UniSTS
stSG622737  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,750,288 - 40,751,292UniSTSGRCh37
Build 362139,672,158 - 39,673,162RGDNCBI36
Celera2125,947,976 - 25,948,980RGD
HuRef2126,219,072 - 26,220,064UniSTS
stSG622738  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,751,273 - 40,752,378UniSTSGRCh37
Build 362139,673,143 - 39,674,248RGDNCBI36
Celera2125,948,961 - 25,950,066RGD
HuRef2126,220,045 - 26,221,150UniSTS
stSG622739  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,752,361 - 40,753,389UniSTSGRCh37
Build 362139,674,231 - 39,675,259RGDNCBI36
Celera2125,950,049 - 25,951,077RGD
HuRef2126,221,133 - 26,222,161UniSTS
stSG622740  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,753,368 - 40,753,566UniSTSGRCh37
Build 362139,675,238 - 39,675,436RGDNCBI36
Celera2125,951,056 - 25,951,254RGD
HuRef2126,222,140 - 26,222,338UniSTS
stSG622741  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,756,680 - 40,757,772UniSTSGRCh37
Build 362139,678,550 - 39,679,642RGDNCBI36
Celera2125,954,368 - 25,955,460RGD
HuRef2126,225,451 - 26,226,543UniSTS
stSG622742  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,757,811 - 40,759,200UniSTSGRCh37
Build 362139,679,681 - 39,681,070RGDNCBI36
Celera2125,955,499 - 25,956,889RGD
HuRef2126,226,582 - 26,227,972UniSTS
stSG622743  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,759,181 - 40,760,518UniSTSGRCh37
Build 362139,681,051 - 39,682,388RGDNCBI36
Celera2125,956,870 - 25,958,207RGD
HuRef2126,227,953 - 26,229,291UniSTS
stSG622744  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,760,509 - 40,761,849UniSTSGRCh37
Build 362139,682,379 - 39,683,719RGDNCBI36
Celera2125,958,198 - 25,959,538RGD
HuRef2126,229,282 - 26,230,622UniSTS
stSG622745  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,761,830 - 40,763,137UniSTSGRCh37
Build 362139,683,700 - 39,685,007RGDNCBI36
Celera2125,959,519 - 25,960,826RGD
HuRef2126,230,603 - 26,231,910UniSTS
stSG622746  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,763,118 - 40,764,432UniSTSGRCh37
Build 362139,684,988 - 39,686,302RGDNCBI36
Celera2125,960,807 - 25,962,121RGD
HuRef2126,231,891 - 26,233,205UniSTS
stSG622747  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,764,413 - 40,765,498UniSTSGRCh37
Build 362139,686,283 - 39,687,368RGDNCBI36
Celera2125,962,102 - 25,963,188RGD
HuRef2126,233,186 - 26,234,272UniSTS
stSG622748  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,767,595 - 40,768,682UniSTSGRCh37
Build 362139,689,465 - 39,690,552RGDNCBI36
Celera2125,965,284 - 25,966,370RGD
HuRef2126,236,336 - 26,237,422UniSTS
stSG622749  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372140,768,757 - 40,770,129UniSTSGRCh37
Build 362139,690,627 - 39,691,999RGDNCBI36
Celera2125,966,445 - 25,967,822RGD
HuRef2126,237,497 - 26,238,874UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 1445 1218 1166 101 279 92 1817 891 3495 271 1184 1149 20 505 1264 2
Low 994 1710 560 522 1612 373 2539 1304 239 147 274 464 155 1 699 1524 3 1
Below cutoff 62 60 2 1 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_045002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001146218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001350293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001350294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001350295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001350296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_004627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_146614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_146615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_146616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF064861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF121781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK293113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK293866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK297186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK299144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK299245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK310268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL163279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW001614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC012415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC111393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB498697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB500750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Y12478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000380708   ⟹   ENSP00000370084
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,387,765 - 39,397,889 (+)Ensembl
RefSeq Acc Id: ENST00000380713   ⟹   ENSP00000370089
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,386,093 - 39,393,280 (+)Ensembl
RefSeq Acc Id: ENST00000398753   ⟹   ENSP00000381737
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,380,458 - 39,397,116 (+)Ensembl
RefSeq Acc Id: ENST00000415847   ⟹   ENSP00000410228
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,377,698 - 39,406,615 (+)Ensembl
RefSeq Acc Id: ENST00000442773   ⟹   ENSP00000409030
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,380,487 - 39,390,803 (+)Ensembl
RefSeq Acc Id: ENST00000466787   ⟹   ENSP00000485215
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,387,791 - 39,397,254 (+)Ensembl
RefSeq Acc Id: ENST00000471468
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,380,414 - 39,391,205 (+)Ensembl
RefSeq Acc Id: ENST00000476914
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,425,871 - 39,428,528 (+)Ensembl
RefSeq Acc Id: ENST00000478273   ⟹   ENSP00000485087
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,410,869 - 39,428,528 (+)Ensembl
RefSeq Acc Id: ENST00000480690
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,425,919 - 39,428,528 (+)Ensembl
RefSeq Acc Id: ENST00000487869
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,380,394 - 39,392,046 (+)Ensembl
RefSeq Acc Id: ENST00000490860
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,392,896 - 39,397,104 (+)Ensembl
RefSeq Acc Id: ENST00000623703   ⟹   ENSP00000485555
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,380,354 - 39,414,288 (+)Ensembl
RefSeq Acc Id: ENST00000647678   ⟹   ENSP00000497322
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,379,539 - 39,397,887 (+)Ensembl
RefSeq Acc Id: ENST00000647911   ⟹   ENSP00000497171
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,380,368 - 39,428,481 (+)Ensembl
RefSeq Acc Id: ENST00000648495
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,412,418 - 39,428,500 (+)Ensembl
RefSeq Acc Id: ENST00000649100   ⟹   ENSP00000497111
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,380,372 - 39,415,390 (+)Ensembl
RefSeq Acc Id: ENST00000649170   ⟹   ENSP00000496813
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,380,326 - 39,397,889 (+)Ensembl
RefSeq Acc Id: ENST00000649224   ⟹   ENSP00000497189
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,380,414 - 39,397,485 (+)Ensembl
RefSeq Acc Id: ENST00000649499   ⟹   ENSP00000497593
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,390,829 - 39,428,504 (+)Ensembl
RefSeq Acc Id: ENST00000649822   ⟹   ENSP00000498209
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,380,478 - 39,397,888 (+)Ensembl
RefSeq Acc Id: ENST00000650208
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,390,860 - 39,428,326 (+)Ensembl
RefSeq Acc Id: ENST00000650376   ⟹   ENSP00000497103
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2139,379,571 - 39,397,743 (+)Ensembl
RefSeq Acc Id: NM_001146218   ⟹   NP_001139690
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382139,387,781 - 39,397,889 (+)NCBI
GRCh372140,752,213 - 40,769,815 (+)RGD
Celera2125,949,901 - 25,967,508 (+)RGD
HuRef2126,220,985 - 26,238,560 (+)ENTREZGENE
CHM1_12140,320,851 - 40,330,979 (+)NCBI
T2T-CHM13v2.02137,772,367 - 37,782,474 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001350293   ⟹   NP_001337222
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382139,380,458 - 39,397,889 (+)NCBI
T2T-CHM13v2.02137,765,044 - 37,782,474 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001350294   ⟹   NP_001337223
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382139,380,326 - 39,397,889 (+)NCBI
T2T-CHM13v2.02137,764,912 - 37,782,474 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001350295   ⟹   NP_001337224
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382139,380,326 - 39,397,889 (+)NCBI
T2T-CHM13v2.02137,764,912 - 37,782,474 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001350296   ⟹   NP_001337225
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382139,380,326 - 39,397,889 (+)NCBI
T2T-CHM13v2.02137,764,912 - 37,782,474 (+)NCBI
Sequence:
RefSeq Acc Id: NM_004627   ⟹   NP_004618
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382139,380,326 - 39,397,889 (+)NCBI
GRCh372140,752,213 - 40,769,815 (+)RGD
Build 362139,674,140 - 39,691,496 (+)NCBI Archive
Celera2125,949,901 - 25,967,508 (+)RGD
HuRef2126,220,985 - 26,238,560 (+)ENTREZGENE
CHM1_12140,313,371 - 40,330,979 (+)NCBI
T2T-CHM13v2.02137,764,912 - 37,782,474 (+)NCBI
Sequence:
RefSeq Acc Id: NR_146614
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382139,380,326 - 39,397,889 (+)NCBI
T2T-CHM13v2.02137,764,912 - 37,782,474 (+)NCBI
Sequence:
RefSeq Acc Id: NR_146615
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382139,380,326 - 39,428,528 (+)NCBI
T2T-CHM13v2.02137,764,912 - 37,813,128 (+)NCBI
Sequence:
RefSeq Acc Id: NR_146616
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382139,387,781 - 39,397,889 (+)NCBI
T2T-CHM13v2.02137,772,367 - 37,782,474 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001139690 (Get FASTA)   NCBI Sequence Viewer  
  NP_001337222 (Get FASTA)   NCBI Sequence Viewer  
  NP_001337223 (Get FASTA)   NCBI Sequence Viewer  
  NP_001337224 (Get FASTA)   NCBI Sequence Viewer  
  NP_001337225 (Get FASTA)   NCBI Sequence Viewer  
  NP_004618 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH12415 (Get FASTA)   NCBI Sequence Viewer  
  AAI11394 (Get FASTA)   NCBI Sequence Viewer  
  BAF85802 (Get FASTA)   NCBI Sequence Viewer  
  BAG59675 (Get FASTA)   NCBI Sequence Viewer  
  BAG61196 (Get FASTA)   NCBI Sequence Viewer  
  BAG61276 (Get FASTA)   NCBI Sequence Viewer  
  BAH11617 (Get FASTA)   NCBI Sequence Viewer  
  CAA73081 (Get FASTA)   NCBI Sequence Viewer  
  CAB90454 (Get FASTA)   NCBI Sequence Viewer  
  EAX09645 (Get FASTA)   NCBI Sequence Viewer  
  EAX09646 (Get FASTA)   NCBI Sequence Viewer  
  EAX09647 (Get FASTA)   NCBI Sequence Viewer  
  EAX09648 (Get FASTA)   NCBI Sequence Viewer  
  EAX09649 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000370084
  ENSP00000370084.1
  ENSP00000370089.3
  ENSP00000381737
  ENSP00000381737.1
  ENSP00000409030.1
  ENSP00000410228.3
  ENSP00000485087.1
  ENSP00000485215.1
  ENSP00000485555.1
  ENSP00000496813
  ENSP00000496813.1
  ENSP00000497103.1
  ENSP00000497111.1
  ENSP00000497171.1
  ENSP00000497189.1
  ENSP00000497322.1
  ENSP00000497593.1
  ENSP00000498209.1
GenBank Protein O00258 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_004618   ⟸   NM_004627
- Peptide Label: isoform 1
- UniProtKB: D3DSH9 (UniProtKB/Swiss-Prot),   A8MQ44 (UniProtKB/Swiss-Prot),   A8KAP8 (UniProtKB/Swiss-Prot),   O60740 (UniProtKB/Swiss-Prot),   O00258 (UniProtKB/Swiss-Prot),   A0A3B3ISE9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001139690   ⟸   NM_001146218
- Peptide Label: isoform 2
- UniProtKB: H7BYE5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001337225   ⟸   NM_001350296
- Peptide Label: isoform 2
- UniProtKB: H7BYE5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001337224   ⟸   NM_001350295
- Peptide Label: isoform 2
- UniProtKB: H7BYE5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001337223   ⟸   NM_001350294
- Peptide Label: isoform 2
- UniProtKB: H7BYE5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001337222   ⟸   NM_001350293
- Peptide Label: isoform 3
- UniProtKB: Q0VGA7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000381737   ⟸   ENST00000398753
RefSeq Acc Id: ENSP00000497593   ⟸   ENST00000649499
RefSeq Acc Id: ENSP00000497189   ⟸   ENST00000649224
RefSeq Acc Id: ENSP00000496813   ⟸   ENST00000649170
RefSeq Acc Id: ENSP00000498209   ⟸   ENST00000649822
RefSeq Acc Id: ENSP00000497111   ⟸   ENST00000649100
RefSeq Acc Id: ENSP00000485087   ⟸   ENST00000478273
RefSeq Acc Id: ENSP00000485555   ⟸   ENST00000623703
RefSeq Acc Id: ENSP00000485215   ⟸   ENST00000466787
RefSeq Acc Id: ENSP00000497103   ⟸   ENST00000650376
RefSeq Acc Id: ENSP00000410228   ⟸   ENST00000415847
RefSeq Acc Id: ENSP00000409030   ⟸   ENST00000442773
RefSeq Acc Id: ENSP00000370084   ⟸   ENST00000380708
RefSeq Acc Id: ENSP00000370089   ⟸   ENST00000380713
RefSeq Acc Id: ENSP00000497322   ⟸   ENST00000647678
RefSeq Acc Id: ENSP00000497171   ⟸   ENST00000647911

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O00258-F1-model_v2 AlphaFold O00258 1-174 view protein structure

Promoters
RGD ID:13602842
Promoter ID:EPDNEW_H27605
Type:initiation region
Name:WRB_2
Description:tryptophan rich basic protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H27606  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh382139,387,781 - 39,387,841EPDNEW
RGD ID:13602840
Promoter ID:EPDNEW_H27606
Type:initiation region
Name:WRB_1
Description:tryptophan rich basic protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H27605  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh382139,387,792 - 39,387,852EPDNEW
RGD ID:6799430
Promoter ID:HG_KWN:40905
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000398753,   OTTHUMT00000141745,   OTTHUMT00000141747,   OTTHUMT00000141749,   OTTHUMT00000194972
Position:
Human AssemblyChrPosition (strand)Source
Build 362139,673,879 - 39,674,379 (+)MPROMDB
RGD ID:6852626
Promoter ID:EP74125
Type:initiation region
Name:HS_WRB_1
Description:Tryptophan rich basic protein.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:alternative promoter #1 of 2; 5' exon 1; site 1.; see alsoEP74126  
Experiment Methods:Mammalian gene collection (MGC) full-length cDNA cloning
Position:
Human AssemblyChrPosition (strand)Source
Build 362139,674,106 - 39,674,166EPD
RGD ID:6852628
Promoter ID:EP74126
Type:initiation region
Name:HS_WRB_2
Description:Tryptophan rich basic protein.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:alternative promoter #2 of 2; 5' exon 1; site 2; major promoter.; see alsoEP74125  
Experiment Methods:Mammalian gene collection (MGC) full-length cDNA cloning
Position:
Human AssemblyChrPosition (strand)Source
Build 362139,674,168 - 39,674,228EPD
RGD ID:6799638
Promoter ID:HG_KWN:40906
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000194973
Position:
Human AssemblyChrPosition (strand)Source
Build 362139,679,706 - 39,680,206 (+)MPROMDB
RGD ID:6799640
Promoter ID:HG_KWN:40907
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000380708,   UC010GOJ.1
Position:
Human AssemblyChrPosition (strand)Source
Build 362139,681,306 - 39,681,806 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:12790 AgrOrtholog
COSMIC GET1 COSMIC
Ensembl Genes ENSG00000182093 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000380708 ENTREZGENE
  ENST00000380708.5 UniProtKB/Swiss-Prot
  ENST00000380713.7 UniProtKB/TrEMBL
  ENST00000398753 ENTREZGENE
  ENST00000398753.5 UniProtKB/Swiss-Prot
  ENST00000415847.3 UniProtKB/TrEMBL
  ENST00000442773.1 UniProtKB/TrEMBL
  ENST00000466787.1 UniProtKB/TrEMBL
  ENST00000478273.5 UniProtKB/TrEMBL
  ENST00000623703.3 UniProtKB/TrEMBL
  ENST00000647678.1 UniProtKB/TrEMBL
  ENST00000647911.1 UniProtKB/TrEMBL
  ENST00000649100.1 UniProtKB/TrEMBL
  ENST00000649170 ENTREZGENE
  ENST00000649170.1 UniProtKB/Swiss-Prot
  ENST00000649224.1 UniProtKB/TrEMBL
  ENST00000649499.1 UniProtKB/TrEMBL
  ENST00000649822.1 UniProtKB/TrEMBL
  ENST00000650376.1 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.287.660 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000182093 GTEx
HGNC ID HGNC:12790 ENTREZGENE
Human Proteome Map GET1 Human Proteome Map
InterPro Get1 UniProtKB/TrEMBL
  Helix_hairpin_bin_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WRB/Get1 UniProtKB/Swiss-Prot
KEGG Report hsa:7485 UniProtKB/Swiss-Prot
NCBI Gene 7485 ENTREZGENE
OMIM 602915 OMIM
PANTHER GUIDED ENTRY OF TAIL-ANCHORED PROTEINS FACTOR 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TAIL-ANCHORED PROTEIN INSERTION RECEPTOR WRB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CHD5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A096LNK8_HUMAN UniProtKB/TrEMBL
  A0A096LNT6_HUMAN UniProtKB/TrEMBL
  A0A3B3ISA8_HUMAN UniProtKB/TrEMBL
  A0A3B3ISE5_HUMAN UniProtKB/TrEMBL
  A0A3B3ISE9 ENTREZGENE
  A0A3B3IT79_HUMAN UniProtKB/TrEMBL
  A0A3B3IUG4_HUMAN UniProtKB/TrEMBL
  A8KAP8 ENTREZGENE
  A8MQ44 ENTREZGENE
  B4DLW3_HUMAN UniProtKB/TrEMBL
  B7Z1T1_HUMAN UniProtKB/TrEMBL
  C9JLV3_HUMAN UniProtKB/TrEMBL
  D3DSH9 ENTREZGENE
  H7BYE5 ENTREZGENE, UniProtKB/TrEMBL
  H7C384_HUMAN UniProtKB/TrEMBL
  O00258 ENTREZGENE
  O60740 ENTREZGENE
  Q0VGA7 ENTREZGENE, UniProtKB/TrEMBL
  WRB_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary A8KAP8 UniProtKB/Swiss-Prot
  A8MQ44 UniProtKB/Swiss-Prot
  D3DSH9 UniProtKB/Swiss-Prot
  O60740 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-05-21 GET1  guided entry of tail-anchored proteins factor 1  WRB  tryptophan rich basic protein  Symbol and/or name change 5135510 APPROVED