DEFB109B (defensin beta 109B) - Rat Genome Database

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Gene: DEFB109B (defensin beta 109B) Chlorocebus sabaeus
Analyze
Symbol: DEFB109B
Name: defensin beta 109B
RGD ID: 40901319
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: putative beta-defensin 109B
RGD Orthologs
Human
Mouse
Rat
Dog
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_023670491169 - 869 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


References

Genomics

Comparative Map Data
DEFB109B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_023670491169 - 869 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
DEFB109B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3887,309,535 - 7,320,096 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl87,312,722 - 7,320,096 (+)EnsemblGRCh38hg38GRCh38
GRCh3787,167,057 - 7,177,618 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3687,157,777 - 7,164,882 (+)NCBINCBI36Build 36hg18NCBI36
Cytogenetic Map8p23.1NCBI
HuRef86,865,006 - 6,872,110 (+)NCBIHuRef
CHM1_187,450,324 - 7,457,428 (-)NCBICHM1_1
T2T-CHM13v2.087,038,512 - 7,049,075 (+)NCBIT2T-CHM13v2.0
Defb48
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391463,214,974 - 63,221,959 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1463,214,973 - 63,221,959 (-)EnsemblGRCm39 Ensembl
GRCm381462,977,524 - 62,984,510 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1462,977,524 - 62,984,510 (-)EnsemblGRCm38mm10GRCm38
MGSCv371463,596,361 - 63,603,347 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361461,931,638 - 61,938,620 (-)NCBIMGSCv36mm8
Celera1460,736,259 - 60,743,070 (-)NCBICelera
Cytogenetic Map14D1NCBI
cM Map1433.23NCBI
Defb42
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81541,410,651 - 41,417,610 (-)NCBIGRCr8
mRatBN7.21537,234,662 - 37,241,621 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1537,234,751 - 37,235,637 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1539,099,940 - 39,106,775 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01540,250,746 - 40,257,581 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01538,695,393 - 38,702,210 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01546,159,511 - 46,166,335 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1546,159,511 - 46,166,335 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01549,925,455 - 49,932,279 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41542,247,668 - 42,254,485 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1536,920,462 - 36,927,279 (-)NCBICelera
Cytogenetic Map15p12NCBI
DEFB109B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11653,914,753 - 53,954,742 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1649,418,450 - 49,458,400 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01656,229,055 - 56,268,947 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11654,124,609 - 54,142,590 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01654,721,310 - 54,739,517 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01654,956,864 - 54,974,852 (-)NCBIUU_Cfam_GSD_1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_037996422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010004459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_037996422   ⟹   XP_037852350
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023670491169 - 869 (+)NCBI
Protein Sequences
Protein RefSeqs XP_037852350 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_037852350   ⟸   XM_037996422


Additional Information

Database Acc Id Source(s)
NCBI Gene DEFB109B ENTREZGENE