1700087I21Rik (RIKEN cDNA 1700087I21 gene) - Rat Genome Database

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Gene: 1700087I21Rik (RIKEN cDNA 1700087I21 gene) Mus musculus
Analyze
Symbol: 1700087I21Rik
Name: RIKEN cDNA 1700087I21 gene
RGD ID: 39129127
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: Gm34758; hypothetical protein LOC76619; LOC118567337; predicted gene, 34758; uncharacterized LOC118567337; uncharacterized protein Gm34758; uncharacterized protein LOC76619
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914103,584,335 - 103,597,918 (+)NCBIGRCm39GRCm39mm39
GRCm3914103,623,737 - 103,687,305 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14103,584,323 - 103,597,922 (+)NCBIGRCm39 Ensembl
GRCm39 Ensembl14103,584,323 - 103,597,922 (+)EnsemblGRCm39 Ensembl
GRCm39 Ensembl14103,584,343 - 103,687,303 (+)EnsemblGRCm39 Ensembl
GRCm3814103,346,584 - 103,449,869 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14103,424,905 - 103,449,867 (+)NCBIGRCm38mm10GRCm38
Celera14101,973,759 - 102,071,081 (+)NCBICelera
Cytogenetic Map14E2.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  


Genomics

Variants

.
Variants in 1700087I21Rik
2433 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
14747006Mancz12_mmandible centroid size 12 (mouse)1470071977104071977Mouse
10054475Ossc3_mosteosarcoma susceptibility 3 (mouse)Not determined1470863768104863926Mouse
1300551Lprm3_mlymphoproliferation modifier 3 (mouse)Not determined1471221224105221344Mouse
1301844Pgia29_mproteoglycan induced arthritis 29 (mouse)Not determined1474352296108352384Mouse
1558819Ossc2_mosteosarcoma susceptibility 2 (mouse)Not determined1474394976108395093Mouse
14928314Manh77_mmandible shape 77 (mouse)1476767790110767790Mouse
1558823Tbbmd6_mtotal body bone mineral density 6 (mouse)Not determined1477073696111073787Mouse
4142508Tgq25_mtriglyceride QTL 25 (mouse)Not determined85134068119134068Mouse
12792981Fbmd5_mfemoral bone mineral density 5, females only (mouse)1499838217125033054Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000226705
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14103,676,118 - 103,678,421 (+)Ensembl
RefSeq Acc Id: ENSMUST00000228080
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14103,662,341 - 103,687,303 (+)Ensembl
RefSeq Acc Id: ENSMUST00000240785
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14103,584,323 - 103,597,922 (+)Ensembl
RefSeq Acc Id: ENSMUST00000240898
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14103,584,343 - 103,678,929 (+)Ensembl
RefSeq Acc Id: NR_166861
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914103,584,335 - 103,597,918 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004938586
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914103,640,616 - 103,687,305 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004938587
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914103,623,737 - 103,687,305 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004938588
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914103,675,110 - 103,687,305 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000115099 Ensembl
  ENSMUSG00000119948 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000240785 ENTREZGENE
MGD MGI:1923869 ENTREZGENE
NCBI Gene 1700087I21Rik ENTREZGENE
PhenoGen 1700087I21Rik PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-04-02 1700087I21Rik  RIKEN cDNA 1700087I21 gene  LOC118567337  uncharacterized LOC118567337  Symbol and/or name change 5135510 APPROVED
2024-03-21 LOC118567337  uncharacterized LOC118567337  1700087I21Rik  RIKEN cDNA 1700087I21 gene  Data Merged 737654 PROVISIONAL
2024-03-21 LOC118567337  uncharacterized LOC118567337  Gm34758  predicted gene, 34758  Data Merged 737654 PROVISIONAL