Btbd35f15 (BTB domain containing 35, family member 15) - Rat Genome Database

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Gene: Btbd35f15 (BTB domain containing 35, family member 15) Mus musculus
Analyze
No known orthologs.
Symbol: Btbd35f15
Name: BTB domain containing 35, family member 15
RGD ID: 2307982
MGI Page MGI
Description:
Type: protein-coding
RefSeq Status: INFERRED
Previously known as: 100040698; germ cell-less homolog 1 family member; Gm2913; novel protein similar to Germ cell-less protein-like 2 mGclh; predicted gene 2913
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X33,012,850 - 33,014,809 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX33,012,861 - 33,014,777 (-)EnsemblGRCm39 Ensembl
GRCm38X33,575,387 - 33,577,346 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX33,575,398 - 33,577,314 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X31,750,885 - 31,752,381 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X31,750,517 - 31,752,466 (-)NCBIMGSCv36mm8
Cytogenetic MapXA3.1NCBI
cM MapX19.86NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:21873635  


Genomics


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
1301551Spha1_msperm head anomaly 1 (mouse)Not determinedX1026622539921652Mouse
13208553Wght11_mweight 11 (mouse)X1186623959045360Mouse
13208557Lgth13_mbody length 13 (mouse)X1186623959045360Mouse
1558721Bw1_mbody weight QTL 1 (mouse)Not determinedX2060678347179225Mouse
12738418Lfibq12_mliver fibrosis QTL 12 (mouse)X2572817443635700Mouse

Markers in Region
px-11_c8  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXA1.1UniSTS
Cytogenetic MapXA3.1UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001243015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CT867957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000186329   ⟹   ENSMUSP00000140464
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX33,012,861 - 33,014,777 (-)Ensembl
GRCm38.p6 EnsemblX33,575,398 - 33,577,314 (-)Ensembl
RefSeq Acc Id: NM_001243015   ⟹   NP_001229944
RefSeq Status: INFERRED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X33,012,850 - 33,014,809 (-)NCBI
GRCm38X33,575,387 - 33,577,346 (-)ENTREZGENE
cM MapX ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001229944 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000140464
  ENSMUSP00000140464.2
Reference Protein Sequences
RefSeq Acc Id: NP_001229944   ⟸   NM_001243015
- UniProtKB: A0A087WR44 (UniProtKB/TrEMBL),   J3QNQ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000140464   ⟸   ENSMUST00000186329
Protein Domains
BTB

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A087WR44-F1-model_v2 AlphaFold A0A087WR44 1-498 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3781091 AgrOrtholog
Ensembl Genes ENSMUSG00000101294 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000186329 ENTREZGENE
  ENSMUST00000186329.2 UniProtKB/TrEMBL
InterPro BTB/POZ-like UniProtKB/TrEMBL
  BTB/POZ_fold UniProtKB/TrEMBL
  Gcl-like UniProtKB/TrEMBL
KEGG Report mmu:100040698 UniProtKB/TrEMBL
MGD MGI:3781091 ENTREZGENE
NCBI Gene 100040698 ENTREZGENE
PANTHER BTB DOMAIN-CONTAINING 35, FAMILY MEMBER 10-RELATED UniProtKB/TrEMBL
  PTHR23231 UniProtKB/TrEMBL
Pfam BTB UniProtKB/TrEMBL
PhenoGen Btbd35f15 PhenoGen
PROSITE BTB UniProtKB/TrEMBL
SMART BTB UniProtKB/TrEMBL
Superfamily-SCOP SSF54695 UniProtKB/TrEMBL
UniProt A0A087WR44 ENTREZGENE, UniProtKB/TrEMBL
  J3QNQ5 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-11-08 Btbd35f15  BTB domain containing 35, family member 15  Gm2913  predicted gene 2913  Symbol and/or name change 5135510 APPROVED