Gm7324 (predicted gene 7324) - Rat Genome Database

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Gene: Gm7324 (predicted gene 7324) Mus musculus
Analyze
No known orthologs.
Symbol: Gm7324
Name: predicted gene 7324
RGD ID: 2295902
MGI Page MGI
Description: Predicted to enable RNA binding activity. Predicted to be involved in positive regulation of mRNA splicing, via spliceosome. Predicted to be part of spliceosomal complex.
Type: pseudo (Ensembl: protein-coding)
RefSeq Status: INFERRED
Previously known as: EG652988; Rbmxrtp
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Related Functional Gene: Rbmxl1  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391443,951,191 - 43,952,827 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1443,935,285 - 43,952,835 (+)EnsemblGRCm39 Ensembl
GRCm381443,713,734 - 43,715,370 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1443,697,828 - 43,715,378 (+)EnsemblGRCm38mm10GRCm38
MGSCv371444,291,399 - 44,293,035 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361442,593,600 - 42,595,209 (+)NCBIMGSCv36mm8
Celera1438,884,281 - 38,885,917 (+)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1422.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function
RNA binding  (IBA)

References
Additional References at PubMed
PMID:21873635  


Genomics

Variants

.
Variants in Gm7324
7 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:34
Count of miRNA genes:33
Interacting mature miRNAs:33
Transcripts:ENSMUST00000094051
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141864Mrdq4_mmodifier of retinal degeneration QTL 4 (mouse)Not determined992324548765082Mouse
1300779Dyscalc4_mdystrophic cardiac calcinosis 4 (mouse)Not determined141221287146213007Mouse
27226748Femd8_mfemur midshaft diameter 8, 10 week (mouse)141376927346737457Mouse
27226752Femd4_mfemur midshaft diameter 4, 5 week (mouse)141376927347237457Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141516061649160765Mouse
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
14746973Manh76_mmandible shape 76 (mouse)142228721756287217Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142792195761137449Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142999699463997133Mouse
27226775Tibl7_mtibia length 7, 5 week (mouse)143032195748837457Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143033525064335381Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse
27226737Metcl12_mmetatarsal-calcaneal length 12, 10 week (mouse)143322195759437449Mouse
27226727Tibl21_mtibia length 21, 16 week (mouse)143412195752937457Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143743018571430320Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144296241676962593Mouse
1301424Skull21_mskull morphology 21 (mouse)Not determined144296241676962593Mouse
1300805Mors3_mmodifier of obesity related sterility 3 (mouse)Not determined144303727077037418Mouse
1301091Bbaa21_mB.burgdorferi-associated arthritis 21 (mouse)Not determined144306584777066045Mouse
4141400Nilac8_mnicotine induced locomotor activity 8 (mouse)Not determined144306584777066045Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000094051   ⟹   ENSMUSP00000154633
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1443,951,189 - 43,952,835 (+)Ensembl
GRCm38.p6 Ensembl1443,713,732 - 43,715,378 (+)Ensembl
RefSeq Acc Id: ENSMUST00000228507   ⟹   ENSMUSP00000154111
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1443,935,285 - 43,951,449 (+)Ensembl
GRCm38.p6 Ensembl1443,697,828 - 43,713,992 (+)Ensembl
Protein Sequences
Ensembl Protein ENSMUSP00000154111.2
  ENSMUSP00000154633.2
Reference Protein Sequences
RefSeq Acc Id: ENSMUSP00000154633   ⟸   ENSMUST00000094051
RefSeq Acc Id: ENSMUSP00000154111   ⟸   ENSMUST00000228507
Protein Domains
RRM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A2I3BRL8-F1-model_v2 AlphaFold A0A2I3BRL8 1-388 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3646999 AgrOrtholog
Ensembl Genes ENSMUSG00000049235 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000094051.6 UniProtKB/TrEMBL
  ENSMUST00000228507.2 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.330 UniProtKB/TrEMBL
InterPro Nucleotide-bd_a/b_plait_sf UniProtKB/TrEMBL
  RBD_domain_sf UniProtKB/TrEMBL
  RBM1CTR UniProtKB/TrEMBL
  RRM_dom UniProtKB/TrEMBL
  RRM_dom_euk UniProtKB/TrEMBL
MGD MGI:3646999 ENTREZGENE
NCBI Gene 652988 ENTREZGENE
PANTHER RNA-BINDING MOTIF PROTEIN, X CHROMOSOME UniProtKB/TrEMBL
  TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED UniProtKB/TrEMBL
Pfam RBM1CTR UniProtKB/TrEMBL
  RRM_1 UniProtKB/TrEMBL
PhenoGen Gm7324 PhenoGen
PROSITE RRM UniProtKB/TrEMBL
SMART RRM UniProtKB/TrEMBL
  RRM_1 UniProtKB/TrEMBL
Superfamily-SCOP SSF54928 UniProtKB/TrEMBL
UniProt A0A2I3BQC0_MOUSE UniProtKB/TrEMBL
  A0A2I3BRL8_MOUSE UniProtKB/TrEMBL