Nrxn1 (neurexin 1) - Rat Genome Database

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Gene: Nrxn1 (neurexin 1) Heterocephalus glaber
Analyze
Symbol: Nrxn1
Name: neurexin 1
RGD ID: 18935932
Description: ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); calcium channel regulator activity (ortholog); calcium ion binding (ortholog); INVOLVED IN adult behavior (ortholog); calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); cellular response to calcium ion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); CHROMOSOME 2p16.3 DELETION SYNDROME (ortholog); FOUND IN axonal growth cone (ortholog); cell surface (ortholog); endocytic vesicle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: neurexin-1; Neurexin-1-alpha
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473831,133,346 - 32,273,565 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473831,134,551 - 32,273,596 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
adult behavior  (ISO)
calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules  (ISO)
cellular response to calcium ion  (ISO)
cerebellar granule cell differentiation  (ISO)
chemical synaptic transmission  (ISO)
circadian rhythm  (ISO)
establishment of protein localization  (ISO)
filopodium assembly  (ISO)
gamma-aminobutyric acid receptor clustering  (ISO)
gephyrin clustering involved in postsynaptic density assembly  (ISO)
guanylate kinase-associated protein clustering  (ISO)
heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules  (ISO)
learning  (ISO)
negative regulation of filopodium assembly  (ISO)
negative regulation of gene expression  (ISO)
neuroligin clustering involved in postsynaptic membrane assembly  (ISO)
neuromuscular process controlling balance  (ISO)
neuron cell-cell adhesion  (ISO)
neuron maturation  (ISO)
neuron projection development  (ISO)
neurotransmitter secretion  (ISO)
NMDA glutamate receptor clustering  (ISO)
positive regulation of ERK1 and ERK2 cascade  (ISO)
positive regulation of excitatory postsynaptic potential  (ISO)
positive regulation of fibroblast growth factor receptor signaling pathway  (ISO)
positive regulation of gene expression  (ISO)
positive regulation of peptidyl-serine phosphorylation  (ISO)
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction  (ISO)
positive regulation of protein kinase A signaling  (ISO)
positive regulation of protein localization to plasma membrane  (ISO)
positive regulation of synapse assembly  (ISO)
positive regulation of synapse maturation  (ISO)
positive regulation of synaptic transmission, glutamatergic  (ISO)
postsynaptic density protein 95 clustering  (ISO)
postsynaptic membrane assembly  (ISO)
prepulse inhibition  (ISO)
presynapse assembly  (ISO)
presynaptic membrane assembly  (ISO)
protein localization to synapse  (ISO)
protein-containing complex assembly involved in synapse maturation  (ISO)
receptor localization to synapse  (ISO)
regulation of grooming behavior  (ISO)
regulation of postsynaptic density assembly  (ISO)
regulation of postsynaptic specialization assembly  (ISO)
regulation of presynapse assembly  (ISO)
regulation of synaptic vesicle cycle  (ISO)
regulation of trans-synaptic signaling by endocannabinoid, modulating synaptic transmission  (ISO)
signal transduction  (ISO)
social behavior  (ISO)
synapse assembly  (ISO)
synaptic membrane adhesion  (ISO)
synaptic vesicle clustering  (ISO)
trans-synaptic signaling, modulating synaptic transmission  (ISO)
vesicle docking involved in exocytosis  (ISO)
vocal learning  (ISO)
vocalization behavior  (ISO)

References
Additional References at PubMed
PMID:21993625  


Genomics

Comparative Map Data
Nrxn1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473831,133,346 - 32,273,565 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473831,134,551 - 32,273,596 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
NRXN1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38249,918,503 - 51,032,132 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl249,918,503 - 51,225,575 (-)EnsemblGRCh38hg38GRCh38
GRCh37250,145,641 - 51,259,270 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36250,000,992 - 51,113,178 (-)NCBINCBI36Build 36hg18NCBI36
Build 34250,059,138 - 50,486,545NCBI
Celera249,985,850 - 51,099,841 (-)NCBICelera
Cytogenetic Map2p16.3NCBI
HuRef249,879,094 - 50,994,141 (-)NCBIHuRef
CHM1_1250,076,199 - 51,190,490 (-)NCBICHM1_1
T2T-CHM13v2.0249,914,520 - 51,028,290 (-)NCBIT2T-CHM13v2.0
Nrxn1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391790,341,072 - 91,400,587 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1790,341,059 - 91,400,499 (-)EnsemblGRCm39 Ensembl
GRCm381790,033,644 - 91,093,159 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1790,033,631 - 91,093,071 (-)EnsemblGRCm38mm10GRCm38
MGSCv371790,432,984 - 91,492,142 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361790,433,296 - 91,492,142 (-)NCBIMGSCv36mm8
Celera1794,417,402 - 95,489,954 (-)NCBICelera
Cytogenetic Map17E5NCBI
cM Map1759.73NCBI
Nrxn1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr868,931,360 - 10,077,381 (+)NCBIGRCr8
mRatBN7.263,177,788 - 4,323,848 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl63,177,897 - 4,322,710 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx63,476,659 - 4,613,908 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.063,786,080 - 4,923,338 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.063,310,521 - 4,447,776 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0613,886,757 - 15,191,660 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl613,886,740 - 15,191,660 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0624,704,937 - 25,145,167 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0623,843,153 - 24,482,073 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4614,050,929 - 15,354,069 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1615,245,705 - 15,354,069 (-)NCBI
Celera62,975,004 - 4,118,378 (+)NCBICelera
Cytogenetic Map6q11-q12NCBI
Nrxn1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544116,234,070 - 17,178,005 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544116,230,977 - 17,178,003 (-)NCBIChiLan1.0ChiLan1.0
NRXN1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21275,325,549 - 76,440,534 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A75,329,515 - 76,444,501 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A50,063,398 - 51,178,659 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A50,981,997 - 52,095,538 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A50,985,067 - 52,091,277 (-)Ensemblpanpan1.1panPan2
NRXN1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11051,555,660 - 52,666,774 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1051,558,452 - 52,667,569 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1051,401,804 - 52,511,290 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01052,431,369 - 53,560,787 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1052,431,572 - 53,564,557 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11052,126,286 - 53,234,452 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01052,413,764 - 53,524,238 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01052,609,896 - 53,719,985 (-)NCBIUU_Cfam_GSD_1.0
Nrxn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629230,455,821 - 31,526,486 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365081,889,640 - 2,954,039 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NRXN1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl389,803,519 - 90,382,034 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1389,799,426 - 90,914,205 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2395,543,189 - 96,298,412 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NRXN1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11456,051,849 - 57,202,334 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604554,638,899 - 55,766,868 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004839424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_004839425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_004839426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_004839427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021253878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01016364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01016390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH167573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH172850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSHGLT00000021240   ⟹   ENSHGLP00000021037
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473831,133,346 - 31,569,500 (-)Ensembl
RefSeq Acc Id: ENSHGLT00000021241   ⟹   ENSHGLP00000021038
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473831,133,346 - 31,188,732 (-)Ensembl
RefSeq Acc Id: ENSHGLT00000021242   ⟹   ENSHGLP00000021039
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473831,137,620 - 32,273,565 (-)Ensembl
RefSeq Acc Id: ENSHGLT00000021243   ⟹   ENSHGLP00000021040
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473831,137,620 - 32,273,565 (-)Ensembl
RefSeq Acc Id: ENSHGLT00000021244   ⟹   ENSHGLP00000021041
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473831,137,620 - 32,273,565 (-)Ensembl
RefSeq Acc Id: ENSHGLT00000021245   ⟹   ENSHGLP00000021042
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473831,137,620 - 32,273,565 (-)Ensembl
RefSeq Acc Id: ENSHGLT00000021246   ⟹   ENSHGLP00000021043
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473831,704,331 - 31,744,404 (-)Ensembl
RefSeq Acc Id: XM_004839424   ⟹   XP_004839481
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,137,620 - 32,273,565 (-)NCBI
RefSeq Acc Id: XM_004839425   ⟹   XP_004839482
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,137,620 - 32,273,565 (-)NCBI
RefSeq Acc Id: XM_004839426   ⟹   XP_004839483
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,134,551 - 32,273,596 (-)NCBI
RefSeq Acc Id: XM_004839427   ⟹   XP_004839484
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,137,620 - 32,273,565 (-)NCBI
RefSeq Acc Id: XM_021253848   ⟹   XP_021109507
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,134,551 - 32,273,596 (-)NCBI
RefSeq Acc Id: XM_021253849   ⟹   XP_021109508
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,134,551 - 32,273,596 (-)NCBI
RefSeq Acc Id: XM_021253850   ⟹   XP_021109509
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,134,551 - 32,273,565 (-)NCBI
RefSeq Acc Id: XM_021253851   ⟹   XP_021109510
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,134,551 - 32,273,596 (-)NCBI
RefSeq Acc Id: XM_021253852   ⟹   XP_021109511
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,134,551 - 32,273,596 (-)NCBI
RefSeq Acc Id: XM_021253853   ⟹   XP_021109512
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,134,551 - 32,273,596 (-)NCBI
RefSeq Acc Id: XM_021253854   ⟹   XP_021109513
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,134,551 - 32,273,565 (-)NCBI
RefSeq Acc Id: XM_021253855   ⟹   XP_021109514
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,137,620 - 32,273,565 (-)NCBI
RefSeq Acc Id: XM_021253857   ⟹   XP_021109516
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,137,620 - 32,273,565 (-)NCBI
RefSeq Acc Id: XM_021253858   ⟹   XP_021109517
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,137,620 - 32,273,565 (-)NCBI
RefSeq Acc Id: XM_021253859   ⟹   XP_021109518
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,137,620 - 32,273,565 (-)NCBI
RefSeq Acc Id: XM_021253860   ⟹   XP_021109519
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,137,620 - 32,273,565 (-)NCBI
RefSeq Acc Id: XM_021253861   ⟹   XP_021109520
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,134,551 - 32,273,596 (-)NCBI
RefSeq Acc Id: XM_021253862   ⟹   XP_021109521
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,134,551 - 32,273,565 (-)NCBI
RefSeq Acc Id: XM_021253863   ⟹   XP_021109522
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,137,620 - 32,273,565 (-)NCBI
RefSeq Acc Id: XM_021253864   ⟹   XP_021109523
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,137,620 - 32,273,565 (-)NCBI
RefSeq Acc Id: XM_021253865   ⟹   XP_021109524
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,137,620 - 32,273,565 (-)NCBI
RefSeq Acc Id: XM_021253866   ⟹   XP_021109525
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,134,551 - 32,273,596 (-)NCBI
RefSeq Acc Id: XM_021253867   ⟹   XP_021109526
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,137,620 - 32,273,565 (-)NCBI
RefSeq Acc Id: XM_021253868   ⟹   XP_021109527
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,723,849 - 32,273,565 (-)NCBI
RefSeq Acc Id: XM_021253869   ⟹   XP_021109528
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,134,551 - 31,569,562 (-)NCBI
RefSeq Acc Id: XM_021253870   ⟹   XP_021109529
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,137,620 - 31,569,562 (-)NCBI
RefSeq Acc Id: XM_021253871   ⟹   XP_021109530
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,134,551 - 31,569,562 (-)NCBI
RefSeq Acc Id: XM_021253872   ⟹   XP_021109531
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,137,620 - 31,569,562 (-)NCBI
RefSeq Acc Id: XM_021253873   ⟹   XP_021109532
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473832,159,542 - 32,273,596 (-)NCBI
RefSeq Acc Id: XM_021253874   ⟹   XP_021109533
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473832,159,540 - 32,273,596 (-)NCBI
RefSeq Acc Id: XM_021253875   ⟹   XP_021109534
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,134,551 - 31,188,680 (-)NCBI
RefSeq Acc Id: XM_021253876   ⟹   XP_021109535
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,134,551 - 31,188,682 (-)NCBI
RefSeq Acc Id: XM_021253877   ⟹   XP_021109536
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,134,551 - 32,273,596 (-)NCBI
RefSeq Acc Id: XM_021253878   ⟹   XP_021109537
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473831,134,551 - 32,273,596 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004839481 (Get FASTA)   NCBI Sequence Viewer  
  XP_004839482 (Get FASTA)   NCBI Sequence Viewer  
  XP_004839483 (Get FASTA)   NCBI Sequence Viewer  
  XP_004839484 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109507 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109508 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109509 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109510 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109511 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109512 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109513 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109514 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109516 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109517 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109518 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109519 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109520 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109521 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109522 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109523 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109524 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109525 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109526 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109527 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109528 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109529 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109530 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109531 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109532 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109533 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109534 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109535 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109536 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109537 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB02146 (Get FASTA)   NCBI Sequence Viewer  
  EHB15409 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000021037
  ENSHGLP00000021038
  ENSHGLP00000021039
  ENSHGLP00000021040
  ENSHGLP00000021041
  ENSHGLP00000021042
Reference Protein Sequences
RefSeq Acc Id: XP_021109525   ⟸   XM_021253866
- Peptide Label: isoform X22
RefSeq Acc Id: XP_021109537   ⟸   XM_021253878
- Peptide Label: isoform X34
RefSeq Acc Id: XP_021109536   ⟸   XM_021253877
- Peptide Label: isoform X33
RefSeq Acc Id: XP_021109520   ⟸   XM_021253861
- Peptide Label: isoform X14
RefSeq Acc Id: XP_021109511   ⟸   XM_021253852
- Peptide Label: isoform X5
RefSeq Acc Id: XP_021109508   ⟸   XM_021253849
- Peptide Label: isoform X2
RefSeq Acc Id: XP_004839483   ⟸   XM_004839426
- Peptide Label: isoform X16
RefSeq Acc Id: XP_021109510   ⟸   XM_021253851
- Peptide Label: isoform X4
RefSeq Acc Id: XP_021109512   ⟸   XM_021253853
- Peptide Label: isoform X6
RefSeq Acc Id: XP_021109507   ⟸   XM_021253848
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021109513   ⟸   XM_021253854
- Peptide Label: isoform X8
RefSeq Acc Id: XP_021109521   ⟸   XM_021253862
- Peptide Label: isoform X17
RefSeq Acc Id: XP_021109509   ⟸   XM_021253850
- Peptide Label: isoform X3
RefSeq Acc Id: XP_021109530   ⟸   XM_021253871
- Peptide Label: isoform X27
RefSeq Acc Id: XP_021109528   ⟸   XM_021253869
- Peptide Label: isoform X25
RefSeq Acc Id: XP_021109535   ⟸   XM_021253876
- Peptide Label: isoform X32
RefSeq Acc Id: XP_021109534   ⟸   XM_021253875
- Peptide Label: isoform X31
RefSeq Acc Id: XP_021109526   ⟸   XM_021253867
- Peptide Label: isoform X23
RefSeq Acc Id: XP_021109524   ⟸   XM_021253865
- Peptide Label: isoform X21
RefSeq Acc Id: XP_021109514   ⟸   XM_021253855
- Peptide Label: isoform X9
RefSeq Acc Id: XP_021109517   ⟸   XM_021253858
- Peptide Label: isoform X11
RefSeq Acc Id: XP_021109523   ⟸   XM_021253864
- Peptide Label: isoform X20
RefSeq Acc Id: XP_004839482   ⟸   XM_004839425
- Peptide Label: isoform X15
RefSeq Acc Id: XP_021109518   ⟸   XM_021253859
- Peptide Label: isoform X12
RefSeq Acc Id: XP_021109522   ⟸   XM_021253863
- Peptide Label: isoform X19
RefSeq Acc Id: XP_021109519   ⟸   XM_021253860
- Peptide Label: isoform X13
RefSeq Acc Id: XP_004839484   ⟸   XM_004839427
- Peptide Label: isoform X18
RefSeq Acc Id: XP_021109516   ⟸   XM_021253857
- Peptide Label: isoform X10
RefSeq Acc Id: XP_004839481   ⟸   XM_004839424
- Peptide Label: isoform X7
RefSeq Acc Id: XP_021109531   ⟸   XM_021253872
- Peptide Label: isoform X28
RefSeq Acc Id: XP_021109529   ⟸   XM_021253870
- Peptide Label: isoform X26
RefSeq Acc Id: XP_021109527   ⟸   XM_021253868
- Peptide Label: isoform X24
RefSeq Acc Id: XP_021109533   ⟸   XM_021253874
- Peptide Label: isoform X30
RefSeq Acc Id: XP_021109532   ⟸   XM_021253873
- Peptide Label: isoform X29
RefSeq Acc Id: ENSHGLP00000021041   ⟸   ENSHGLT00000021244
RefSeq Acc Id: ENSHGLP00000021039   ⟸   ENSHGLT00000021242
RefSeq Acc Id: ENSHGLP00000021040   ⟸   ENSHGLT00000021243
RefSeq Acc Id: ENSHGLP00000021043   ⟸   ENSHGLT00000021246
RefSeq Acc Id: ENSHGLP00000021038   ⟸   ENSHGLT00000021241
RefSeq Acc Id: ENSHGLP00000021042   ⟸   ENSHGLT00000021245
RefSeq Acc Id: ENSHGLP00000021037   ⟸   ENSHGLT00000021240


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000015032 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000021240 ENTREZGENE
  ENSHGLT00000021241 ENTREZGENE
  ENSHGLT00000021242 ENTREZGENE
  ENSHGLT00000021243 ENTREZGENE
  ENSHGLT00000021244 ENTREZGENE
  ENSHGLT00000021245 ENTREZGENE
NCBI Gene Nrxn1 ENTREZGENE