Mab21l3 (mab-21 like 3) - Rat Genome Database

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Gene: Mab21l3 (mab-21 like 3) Heterocephalus glaber
Analyze
Symbol: Mab21l3
Name: mab-21 like 3
RGD ID: 18919788
Description: ASSOCIATED WITH catecholaminergic polymorphic ventricular tachycardia 1 (ortholog); genetic disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: protein mab-21-like 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477211,845,855 - 11,865,929 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477211,844,823 - 11,864,342 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
Mab21l3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477211,845,855 - 11,865,929 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477211,844,823 - 11,864,342 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MAB21L3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381116,111,399 - 116,138,149 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1116,111,399 - 116,138,149 (+)EnsemblGRCh38hg38GRCh38
GRCh371116,654,020 - 116,680,770 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361116,455,899 - 116,479,384 (+)NCBINCBI36Build 36hg18NCBI36
Celera1114,883,120 - 114,906,605 (+)NCBICelera
Cytogenetic Map1p13.1NCBI
HuRef1114,512,300 - 114,535,787 (+)NCBIHuRef
CHM1_11116,769,127 - 116,792,612 (+)NCBICHM1_1
T2T-CHM13v2.01116,119,359 - 116,146,123 (+)NCBIT2T-CHM13v2.0
Mab21l3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393101,720,392 - 101,743,601 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3101,720,392 - 101,756,275 (-)EnsemblGRCm39 Ensembl
GRCm383101,813,076 - 101,836,283 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3101,813,076 - 101,848,959 (-)EnsemblGRCm38mm10GRCm38
MGSCv373101,616,999 - 101,640,146 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363101,942,137 - 101,965,022 (-)NCBIMGSCv36mm8
Celera3104,025,072 - 104,048,098 (-)NCBICelera
Cytogenetic Map3F2.2NCBI
cM Map344.3NCBI
Mab21l3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82191,937,451 - 191,960,204 (-)NCBIGRCr8
mRatBN7.22189,248,895 - 189,271,652 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2189,248,895 - 189,271,652 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2196,881,904 - 196,904,344 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02194,733,566 - 194,756,228 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02189,560,016 - 189,582,718 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02204,231,936 - 204,269,235 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2204,231,685 - 204,254,699 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02223,666,827 - 223,703,837 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42196,903,848 - 196,926,798 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12196,868,997 - 196,888,640 (-)NCBI
Celera2181,682,377 - 181,705,041 (-)NCBICelera
Cytogenetic Map2q34NCBI
Mab21l3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543519,300,476 - 19,320,332 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543519,300,663 - 19,321,257 (+)NCBIChiLan1.0ChiLan1.0
MAB21L3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21108,749,983 - 108,784,482 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11108,358,513 - 108,382,323 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0186,432,777 - 86,457,064 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11121,482,368 - 121,504,903 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1121,481,357 - 121,504,841 (-)Ensemblpanpan1.1panPan2
MAB21L3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11753,583,510 - 53,606,091 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1753,585,088 - 53,605,748 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1753,230,527 - 53,252,848 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01754,464,336 - 54,486,101 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1754,464,330 - 54,487,212 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11753,501,954 - 53,524,391 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01753,538,046 - 53,561,138 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01754,110,868 - 54,133,173 (+)NCBIUU_Cfam_GSD_1.0
Mab21l3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505813,109,216 - 13,185,341 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366271,336,726 - 1,357,668 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366271,336,731 - 1,375,501 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAB21L3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4104,599,818 - 104,625,234 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14104,572,922 - 104,651,287 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24114,663,158 - 114,741,427 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MAB21L3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12017,581,327 - 17,639,131 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2017,580,612 - 17,602,920 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603820,274,134 - 20,344,391 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000013011   ⟹   ENSHGLP00000012874
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462477211,845,855 - 11,865,929 (+)Ensembl
RefSeq Acc Id: ENSHGLT00000013012   ⟹   ENSHGLP00000012875
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462477211,845,855 - 11,865,929 (+)Ensembl
RefSeq Acc Id: XM_004853798   ⟹   XP_004853855
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462477211,844,823 - 11,864,342 (+)NCBI
RefSeq Acc Id: XM_004853800   ⟹   XP_004853857
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462477211,844,835 - 11,864,342 (+)NCBI
RefSeq Acc Id: XM_004853802   ⟹   XP_004853859
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462477211,844,922 - 11,864,342 (+)NCBI
RefSeq Acc Id: XM_004853804   ⟹   XP_004853861
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462477211,844,963 - 11,864,342 (+)NCBI
RefSeq Acc Id: XM_004853806   ⟹   XP_004853863
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462477211,844,835 - 11,864,342 (+)NCBI
RefSeq Acc Id: XM_021265744   ⟹   XP_021121403
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462477211,844,993 - 11,864,342 (+)NCBI
RefSeq Acc Id: XM_021265746   ⟹   XP_021121405
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462477211,844,993 - 11,864,342 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_004853855   ⟸   XM_004853798
- UniProtKB: A0A0P6JA96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004853857   ⟸   XM_004853800
- UniProtKB: A0A0P6JA96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004853863   ⟸   XM_004853806
- UniProtKB: A0A0P6JA96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004853859   ⟸   XM_004853802
- UniProtKB: A0A0P6JA96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004853861   ⟸   XM_004853804
- UniProtKB: A0A0P6JA96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021121405   ⟸   XM_021265746
- UniProtKB: A0A0P6JA96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021121403   ⟸   XM_021265744
- UniProtKB: A0A0P6JA96 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000012874   ⟸   ENSHGLT00000013011
RefSeq Acc Id: ENSHGLP00000012875   ⟸   ENSHGLT00000013012


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000009205 Ensembl, ENTREZGENE
  ENSHGLG00100037306 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000013011 ENTREZGENE
  ENSHGLT00000013012 ENTREZGENE
  ENSHGLT00100078146 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1410.40 UniProtKB/TrEMBL
  3.30.460.90 UniProtKB/TrEMBL
InterPro Mab-21-like_nuc_Trfase UniProtKB/TrEMBL
  Mab-21_dom UniProtKB/TrEMBL
  Mab-21_HhH/H2TH-like UniProtKB/TrEMBL
NCBI Gene Mab21l3 ENTREZGENE
PANTHER CELL FATE DETERMINING PROTEIN MAB21-RELATED UniProtKB/TrEMBL
  PTHR10656:SF30 UniProtKB/TrEMBL
Pfam Mab-21 UniProtKB/TrEMBL
  Mab-21_C UniProtKB/TrEMBL
SMART Mab-21 UniProtKB/TrEMBL
UniProt A0A0P6JA96 ENTREZGENE, UniProtKB/TrEMBL