Mns1 (meiosis specific nuclear structural 1) - Rat Genome Database

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Gene: Mns1 (meiosis specific nuclear structural 1) Heterocephalus glaber
Analyze
Symbol: Mns1
Name: meiosis specific nuclear structural 1
RGD ID: 18906460
Description: ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cilium organization (ortholog); left/right axis specification (ortholog); positive regulation of cilium assembly (ortholog); ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); Visceral Heterotaxy 9, Autosomal (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Meiosis-specific nuclear structural protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478115,291,416 - 15,328,173 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478115,292,047 - 15,337,466 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:30032202  


Genomics

Comparative Map Data
Mns1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478115,291,416 - 15,328,173 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478115,292,047 - 15,337,466 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MNS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381556,428,724 - 56,465,137 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1556,421,544 - 56,465,137 (-)EnsemblGRCh38hg38GRCh38
GRCh371556,720,922 - 56,757,335 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361554,508,299 - 54,544,627 (-)NCBINCBI36Build 36hg18NCBI36
Celera1533,609,956 - 33,646,382 (-)NCBICelera
Cytogenetic Map15q21.3NCBI
HuRef1533,544,043 - 33,580,471 (-)NCBIHuRef
CHM1_11556,839,205 - 56,875,585 (-)NCBICHM1_1
T2T-CHM13v2.01554,231,531 - 54,267,997 (-)NCBIT2T-CHM13v2.0
Mns1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39972,345,276 - 72,366,036 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl972,345,293 - 72,369,307 (+)EnsemblGRCm39 Ensembl
GRCm38972,437,821 - 72,458,581 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl972,438,011 - 72,462,025 (+)EnsemblGRCm38mm10GRCm38
MGSCv37972,286,336 - 72,306,383 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36972,217,444 - 72,257,141 (+)NCBIMGSCv36mm8
Celera969,626,514 - 69,646,492 (+)NCBICelera
Cytogenetic Map9DNCBI
cM Map940.08NCBI
Mns1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8882,029,587 - 82,050,276 (+)NCBIGRCr8
mRatBN7.2873,148,877 - 73,169,570 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl873,148,877 - 73,176,925 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx878,673,818 - 78,694,551 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0876,946,448 - 76,967,181 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0874,783,843 - 74,804,574 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0879,054,240 - 79,075,119 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl879,054,237 - 79,075,122 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0874,012,277 - 74,033,156 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4877,015,290 - 77,035,979 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera868,580,276 - 68,600,965 (-)NCBICelera
Cytogenetic Map8q24NCBI
Mns1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545017,819,929 - 17,851,762 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545017,819,812 - 17,852,157 (+)NCBIChiLan1.0ChiLan1.0
MNS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21645,674,576 - 45,727,980 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11549,851,180 - 49,910,848 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01535,377,490 - 35,433,871 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11553,713,815 - 53,750,213 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1553,714,110 - 53,750,050 (-)Ensemblpanpan1.1panPan2
MNS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13021,648,709 - 21,682,650 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3021,649,008 - 21,682,576 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3021,614,035 - 21,647,973 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03021,799,554 - 21,833,500 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3021,798,594 - 21,833,442 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13021,739,796 - 21,773,734 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03021,823,571 - 21,857,522 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03021,958,214 - 21,992,155 (-)NCBIUU_Cfam_GSD_1.0
Mns1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864099,917,145 - 99,950,471 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647117,770,823 - 17,798,523 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647117,767,063 - 17,798,507 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MNS1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1115,471,922 - 115,553,524 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11115,471,904 - 115,526,344 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21127,766,386 - 127,821,073 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MNS1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12627,026,932 - 27,060,044 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2627,027,827 - 27,059,863 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666048114,244,560 - 114,277,775 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000008773   ⟹   ENSHGLP00000008679
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462478115,291,416 - 15,328,173 (+)Ensembl
RefSeq Acc Id: XM_004921133   ⟹   XP_004921190
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462478115,292,047 - 15,327,436 (+)NCBI
RefSeq Acc Id: XM_021237189   ⟹   XP_021092848
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462478115,292,047 - 15,337,466 (+)NCBI
RefSeq Acc Id: XM_021237190   ⟹   XP_021092849
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462478115,292,319 - 15,327,436 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004921190 (Get FASTA)   NCBI Sequence Viewer  
  XP_021092848 (Get FASTA)   NCBI Sequence Viewer  
  XP_021092849 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB05216 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000008679
Reference Protein Sequences
RefSeq Acc Id: XP_021092848   ⟸   XM_021237189
- Peptide Label: isoform X1
RefSeq Acc Id: XP_004921190   ⟸   XM_004921133
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021092849   ⟸   XM_021237190
- Peptide Label: isoform X2
RefSeq Acc Id: ENSHGLP00000008679   ⟸   ENSHGLT00000008773


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000006258 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000008773 ENTREZGENE
NCBI Gene Mns1 ENTREZGENE