FGD3 (FYVE, RhoGEF and PH domain containing 3)

Gene: FGD3 (FYVE, RhoGEF and PH domain containing 3) Chlorocebus sabaeus

Analyze

Symbol:

FGD3

Name:

FYVE, RhoGEF and PH domain containing 3

RGD ID:

18777999

Description:

ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (inferred); metal ion binding (inferred); INVOLVED IN cytoskeleton organization (inferred); filopodium assembly (inferred); FOUND IN cytoplasm (inferred); cytoskeleton (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

FYVE, RhoGEF and PH domain-containing protein 3; LOC103219910; uncharacterized LOC103219910; uncharacterized protein LOC103219910

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	103,368,267 - 103,424,194 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	103,368,236 - 103,424,504 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	91,609,869 - 91,696,232 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cytoskeleton organization (IEA)

filopodium assembly (IEA)

Cellular Component

cytoplasm (IEA)

cytoskeleton (IEA)

Molecular Function

guanyl-nucleotide exchange factor activity (IEA)

metal ion binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

FGD3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	103,368,267 - 103,424,194 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	103,368,236 - 103,424,504 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	91,609,869 - 91,696,232 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

FGD3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	92,947,523 - 93,036,233 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	92,947,523 - 93,036,236 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	95,709,805 - 95,798,515 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	94,749,422 - 94,838,339 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	9	66,151,416 - 66,240,262 (+)	NCBI		Celera
Cytogenetic Map	9	q22.31	NCBI
HuRef	9	65,386,766 - 65,475,463 (+)	NCBI		HuRef
CHM1_1	9	95,856,394 - 95,945,176 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	105,114,201 - 105,202,903 (+)	NCBI		T2T-CHM13v2.0

Fgd3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	49,415,030 - 49,473,783 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	49,415,030 - 49,473,787 (-)	Ensembl		GRCm39 Ensembl
GRCm38	13	49,261,554 - 49,320,313 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	49,261,554 - 49,320,311 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	49,358,479 - 49,404,577 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	49,275,047 - 49,321,145 (-)	NCBI		MGSCv36	mm8
Celera	13	50,352,639 - 50,398,634 (-)	NCBI		Celera
Cytogenetic Map	13	A5	NCBI
cM Map	13	25.18	NCBI

Fgd3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	15,531,237 - 15,593,678 (+)	NCBI		GRCr8
mRatBN7.2	17	15,324,848 - 15,387,271 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	15,336,837 - 15,385,712 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	17	15,223,559 - 15,272,757 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	16,828,621 - 16,877,816 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	15,150,350 - 15,199,536 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	15,737,962 - 15,800,403 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	15,749,978 - 15,800,401 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	17,807,528 - 17,855,077 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	21,292,539 - 21,343,264 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	17	21,306,219 - 21,342,775 (+)	NCBI
Celera	17	15,067,402 - 15,115,963 (+)	NCBI		Celera
Cytogenetic Map	17	p14	NCBI

Fgd3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955515	4,968,504 - 5,025,633 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955515	4,967,862 - 5,025,604 (-)	NCBI	ChiLan1.0	ChiLan1.0

FGD3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	46,391,579 - 46,480,368 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	46,393,965 - 46,482,747 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	64,071,083 - 64,159,854 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	92,138,743 - 92,226,835 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	92,138,743 - 92,226,835 (+)	Ensembl	panpan1.1		panPan2

FGD3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	98,624,529 - 98,696,916 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	98,625,138 - 98,648,839 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	99,018,508 - 99,048,949 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	99,241,437 - 99,271,847 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	99,241,434 - 99,271,747 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	98,854,618 - 98,885,002 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	98,589,955 - 98,620,404 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	99,345,579 - 99,375,989 (-)	NCBI		UU_Cfam_GSD_1.0

Fgd3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	8,165,569 - 8,206,669 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936487	2,388,807 - 2,421,350 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936487	2,385,732 - 2,422,326 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FGD3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	42,540,550 - 42,596,528 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	42,457,072 - 42,587,585 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

Fgd3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624868	3,506,662 - 3,542,359 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624868	3,507,448 - 3,560,639 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium		20
Low	36		60
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007969765	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007969766	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037998625	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037998626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037998627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037998628	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037998629	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037998630	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037998631	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037998632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000005210 ⟹ ENSCSAP00000003439

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	12	103,368,236 - 103,424,504 (+)	Ensembl

RefSeq Acc Id:

XM_007969765 ⟹ XP_007967956

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	12	103,368,267 - 103,424,194 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	91,627,436 - 91,696,232 (+)	NCBI

Sequence:

show sequence

TGGGCAAGGAAAAGATTTTCAAGGAAACCATCTACTGTGCGCGAGTCCCTGCCGGCCAATCCCA
GACCCCAGCGCGGAGCCAGGCGCCTGTGCCTGCCAACCCTCAGCACCCTCCTCGGAGAGGCTGG
TGGCATCAGGAAGCCCCTGGCCAGCCTCCACCTGAGCCCAGTGACCTCAGCTTTAAGGATGGAG
TCAGGCAGGGGGTCCTCAACCCTTCCAGGATCCATTGCTGCCCTAGAGGTGCCAGATACTGGAC
CTGGTAGTTCCTCTCTGGGGAAGCTCCAAGCACTCCCCGTCGGGCCCAGGGCCCACTGTGGGGA
TCCTGGCAGCCCAGCTGCAGCAGGGAACGGCTCTCTAGACACGGGCCCCGCGGGAGAGCAGAGT
GGTAGCTTAAAGATCCCCAACCGGGACAGCGGGATCGACAGTCCATCCTCCAGTGTGGCTGGAG
AGAACTTCCCCTGCGAGGAGGGCTTGGAGGCTGGCCCAAGCCCCACTGTGCTGGGGACACACCC
AGAGATGACCCTGGACAGCCAGGTCCCGAAGGTCACCCCCCAGGAGGAGGCCGACAGCGACGTG
GGTGAGGAACCTGACCCTGAGAACACCCCCCAGAAGGCTGACGAGGACGCCGGCCTGGCCCAGC
ACTCTGGCCCGCAGAAGCTTCTCCACATTGCCCAGGAGCTCCTGCACACCGAGGAGACCTATGT
GAGGCGGCTGCACCTGCTGGACCAGGTTTTCTGCACCAGGATGACGGATGCGGGGATCCCCCCA
GAAGTCATCACGGGCATATTCTCTAACATCTCTTCCATCCACCGCTTCCACGGGCAGTTCCTGC
TGCCGGAGCTGAAGACGCGGATCACGGAGGAGTGGGACACAAACCCACGGCTCGGGGACATCCT
GCAGAAGCTGGCCCCATTCCTAAAGATGTACGGCGAGTACGTTAAGAACTTTGACCGAGCCGTG
GGGCTGGTGAGCACGTGGACCCAGCGTTCCCCATTGTTTAAAGACGTCATCCACAGCATCCAGA
AGCAGGAGGTGTGTGGAAACCTGACGCTGCAGCACCACATGCTGGAGCCCGTGCAGAGGGTCCC
CCGGTACGAGCTGCTGCTCAAGGACTATCTGAAGAGGCTCCCGCAGGACGCCCCAGACCGGAAG
GACGCGGAGAGGTCCTTGGAGCTCATCTCCACAGCCGCCAACCACTCCAATGCCGCCATTCGGA
AGGTGGAGAAAATGCACAAGCTCTTGGAGGTGTACGAGCAGCTGGGTGGGGAAGAGGACATTGT
CAACCCGGCCAACGAGCTGATCAAGGAGGGCCAAATCCAGAAGCTATCAGCCAAGAACGGCACC
GCCCAGGACCGCCACCTCTTCCTGTTCAACAGCATGATCCTTTACTGCGTGCCCAAGTTGCGGC
TCATGGGCCAGAAGTTCAGCGTCCGGGAGAAGATGGACATCTCAGGCCTCCAGGTGCAGGATAG
CGTCAAGCCAAACACAGCACATACATTCATCATAACGGGAAGGAAAAGGTCCCTGGAGCTGCAG
ACGCGGACAGAGGAAGAGAAGAAAGAATGGATTCAGATCATCCAGGCCACCATCGAGAAGCACA
AGCAGAACAGTGAGACCTTCAAGGCTTTCGGTGGCGCCTTCAGCCAGGATGAGGACCCCAGCCT
CTCTCCAGACGTGCCTATCACGAGCACCAGCCCTCTGGAGCCTGTGGTGACCACCGAAGGCGGT
TCGGGTGCAGCAGGGCTCGAGCCCAGAAAACTATCCTCTAAGACCAGACGTGACAAGGAGAAGC
AGAGCTGTAAGAGCTGTGGTGAGACCTTCAACTCCATCACGAAGAGGAGGCATCACTGCAAGCT
ATGCGGGGCGGTCATCTGTGGGAAGTGTTCCGAGTTCAAGGCCGAGAACAGCCGGCAGAGCCGC
GTCTGCAGACAGTGTTTCCTGACACAGCCAGTGGCTCCCGAGAGCCCCAGCCCCGAGGCTCCGG
CCGAGCCCAAGCAGAGCACAGAGAAGACACCCGCTGCAGACGCCCAGCCCAGCCTGCTCTGTGG
CCCCCTGCGGCTGTCAGACAGCGGTGAGACCTGGAGCGAGGTGTGGGCCGCCATCCCCATGTCG
GATCCCCAGGTGCTGCACCTGCAGGGAGGCAGCCAGGACGGCCGGCTGCCCCGCACCATCCCTC
TCCCTGGCTGCAAACTGAGTGTGCCGGACCCTGAGGAGAGGCTGGACTCCGGGCATGTGTGGAA
GCTGCAGTGGGCCAAGCAATCCTGGTACCTGAGCGCCCCCTCCGCAGAGCTGCAGCAGCGATGG
CTGGAGACCCTGAGCACTGCTGCCCGTGGGGACACGGCCCAGGACAGCCCGGGGACCCTGCAGC
CTCAGGTCCCTGTGGGCACAGCTGCTCCGTGAGCTGAGTCTCCTGCTGCCCTGCACTCCACCAC
ATTGGGCCTGTGCTCTCCTGGGAGGTGGTGTCAGAGGCCAGATGAAGACCGCCCTGGACTGCTG
AGGGTGGGCCAACGGCCCAGAGCTCAGGACACTTGGCTTTGGAGGGAAGGAAACTGAGGCCCAG
AGAGGGGCAGCCACTGGCCAAGGGTCACCCAGCAAGTCTTGGCTGAGAGCCTGGCCTCCAGCCC
CAGCAGTGTGGCCCAGAGCAGGGGCCGACTGCCACAGTAACCATCATCCATATGGATCGTGTGG
TGATGCTGGCCCAGAAGGCAGAAGGAGGCAGCATGGGCACTGCCAGGGACAGCCACATCCGGCC
GGTCTGCAGTGTGGTCCACCCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCATG
ACTCGCTTCCCACCTCCCTTCTCTGTCCTCTCCTGAGGTCCTGCCTCCAGCCCCCAGGAAGTGG
ACCTGCCGCGTCCTAGCTGGACTCATGGTTCCTAAATAACTGCACTCGGAAGCTCTGCTGGGAC
TTACCCCAGCCACTGAGTGGCAGACGCATGAGATTTGTGGCTGTTCCTGGCGCTAGTGGCACAC
AGTGCTTATCTGCATAAATAAACACTGGCCACCGGCAGTGGCGCAGCCTCA

hide sequence

RefSeq Acc Id:

XM_007969766 ⟹ XP_007967957

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	12	103,368,358 - 103,424,194 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	91,627,253 - 91,696,232 (+)	NCBI

Sequence:

show sequence

GCCTGCCAACCCTCAGCACCCTCCTCGGAGAGGCTGGTGGCATCAGGAAGCCCCTGGCCAGCCT
CCACCTGAGCCCAGTGACCTCAGCTTTAAGGATGGAGTCAGGCAGGGGGTCCTCAACCCTTCCA
GGATCCATTGCTGCCCTAGAGGTGCCAGATACTGGACCTGGTAGTTCCTCTCTGGGGAAGCTCC
AAGCACTCCCCGTCGGGCCCAGGGCCCACTGTGGGGATCCTGGCAGCCCAGCTGCAGCAGGGAA
CGGCTCTCTAGACACGGGCCCCGCGGGAGAGCAGAGTGGTAGCTTAAAGATCCCCAACCGGGAC
AGCGGGATCGACAGTCCATCCTCCAGTGTGGCTGGAGAGAACTTCCCCTGCGAGGAGGGCTTGG
AGGCTGGCCCAAGCCCCACTGTGCTGGGGACACACCCAGAGATGACCCTGGACAGCCAGGTCCC
GAAGGTCACCCCCCAGGAGGAGGCCGACAGCGACGTGGGTGAGGAACCTGACCCTGAGAACACC
CCCCAGAAGGCTGACGAGGACGCCGGCCTGGCCCAGCACTCTGGCCCGCAGAAGCTTCTCCACA
TTGCCCAGGAGCTCCTGCACACCGAGGAGACCTATGTGAGGCGGCTGCACCTGCTGGACCAGGT
TTTCTGCACCAGGATGACGGATGCGGGGATCCCCCCAGAAGTCATCACGGGCATATTCTCTAAC
ATCTCTTCCATCCACCGCTTCCACGGGCAGTTCCTGCTGCCGGAGCTGAAGACGCGGATCACGG
AGGAGTGGGACACAAACCCACGGCTCGGGGACATCCTGCAGAAGCTGGCCCCATTCCTAAAGAT
GTACGGCGAGTACGTTAAGAACTTTGACCGAGCCGTGGGGCTGGTGAGCACGTGGACCCAGCGT
TCCCCATTGTTTAAAGACGTCATCCACAGCATCCAGAAGCAGGAGGTGTGTGGAAACCTGACGC
TGCAGCACCACATGCTGGAGCCCGTGCAGAGGGTCCCCCGGTACGAGCTGCTGCTCAAGGACTA
TCTGAAGAGGCTCCCGCAGGACGCCCCAGACCGGAAGGACGCGGAGAGGTCCTTGGAGCTCATC
TCCACAGCCGCCAACCACTCCAATGCCGCCATTCGGAAGGTGGAGAAAATGCACAAGCTCTTGG
AGGTGTACGAGCAGCTGGGTGGGGAAGAGGACATTGTCAACCCGGCCAACGAGCTGATCAAGGA
GGGCCAAATCCAGAAGCTATCAGCCAAGAACGGCACCGCCCAGGACCGCCACCTCTTCCTGTTC
AACAGCATGATCCTTTACTGCGTGCCCAAGTTGCGGCTCATGGGCCAGAAGTTCAGCGTCCGGG
AGAAGATGGACATCTCAGGCCTCCAGGTGCAGGATAGCGTCAAGCCAAACACAGCACATACATT
CATCATAACGGGAAGGAAAAGGTCCCTGGAGCTGCAGACGCGGACAGAGGAAGAGAAGAAAGAA
TGGATTCAGATCATCCAGGCCACCATCGAGAAGCACAAGCAGAACAGTGAGACCTTCAAGGCTT
TCGGTGGCGCCTTCAGCCAGGATGAGGACCCCAGCCTCTCTCCAGACGTGCCTATCACGAGCAC
CAGCCCTCTGGAGCCTGTGGTGACCACCGAAGGCGGTTCGGGTGCAGCAGGGCTCGAGCCCAGA
AAACTATCCTCTAAGACCAGACGTGACAAGGAGAAGCAGAGCTGTAAGAGCTGTGGTGAGACCT
TCAACTCCATCACGAAGAGGAGGCATCACTGCAAGCTATGCGGGGCGGTCATCTGTGGGAAGTG
TTCCGAGTTCAAGGCCGAGAACAGCCGGCAGAGCCGCGTCTGCAGACAGTGTTTCCTGACACAG
CCAGTGGCTCCCGAGAGCCCCAGCCCCGAGGCTCCGGCCGAGCCCAAGCAGAGCACAGAGACAC
CCGCTGCAGACGCCCAGCCCAGCCTGCTCTGTGGCCCCCTGCGGCTGTCAGACAGCGGTGAGAC
CTGGAGCGAGGTGTGGGCCGCCATCCCCATGTCGGATCCCCAGGTGCTGCACCTGCAGGGAGGC
AGCCAGGACGGCCGGCTGCCCCGCACCATCCCTCTCCCTGGCTGCAAACTGAGTGTGCCGGACC
CTGAGGAGAGGCTGGACTCCGGGCATGTGTGGAAGCTGCAGTGGGCCAAGCAATCCTGGTACCT
GAGCGCCCCCTCCGCAGAGCTGCAGCAGCGATGGCTGGAGACCCTGAGCACTGCTGCCCGTGGG
GACACGGCCCAGGACAGCCCGGGGACCCTGCAGCCTCAGGTCCCTGTGGGCACAGCTGCTCCGT
GAGCTGAGTCTCCTGCTGCCCTGCACTCCACCACATTGGGCCTGTGCTCTCCTGGGAGGTGGTG
TCAGAGGCCAGATGAAGACCGCCCTGGACTGCTGAGGGTGGGCCAACGGCCCAGAGCTCAGGAC
ACTTGGCTTTGGAGGGAAGGAAACTGAGGCCCAGAGAGGGGCAGCCACTGGCCAAGGGTCACCC
AGCAAGTCTTGGCTGAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCAGGGGCCGACT
GCCACAGTAACCATCATCCATATGGATCGTGTGGTGATGCTGGCCCAGAAGGCAGAAGGAGGCA
GCATGGGCACTGCCAGGGACAGCCACATCCGGCCGGTCTGCAGTGTGGTCCACCCCCGCCTCTG
CCCAGCCTGTCTACACCGTGTGAGCTGAATCATGACTCGCTTCCCACCTCCCTTCTCTGTCCTC
TCCTGAGGTCCTGCCTCCAGCCCCCAGGAAGTGGACCTGCCGCGTCCTAGCTGGACTCATGGTT
CCTAAATAACTGCACTCGGAAGCTCTGCTGGGACTTACCCCAGCCACTGAGTGGCAGACGCATG
AGATTTGTGGCTGTTCCTGGCGCTAGTGGCACACAGTGCTTATCTGCATAAATAAACACTGGCC
ACCGGCAGTGGCGCAGCCTCA

hide sequence

RefSeq Acc Id:

XM_037998625 ⟹ XP_037854553

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	91,629,419 - 91,696,232 (+)	NCBI

RefSeq Acc Id:

XM_037998626 ⟹ XP_037854554

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	91,627,436 - 91,696,232 (+)	NCBI

RefSeq Acc Id:

XM_037998627 ⟹ XP_037854555

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	91,627,436 - 91,696,232 (+)	NCBI

RefSeq Acc Id:

XM_037998628 ⟹ XP_037854556

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	91,634,995 - 91,696,232 (+)	NCBI

RefSeq Acc Id:

XM_037998629 ⟹ XP_037854557

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	91,610,074 - 91,696,232 (+)	NCBI

RefSeq Acc Id:

XM_037998630 ⟹ XP_037854558

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	91,634,995 - 91,696,232 (+)	NCBI

RefSeq Acc Id:

XM_037998631 ⟹ XP_037854559

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	91,629,419 - 91,696,232 (+)	NCBI

RefSeq Acc Id:

XM_037998632 ⟹ XP_037854560

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	91,609,869 - 91,696,232 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_007967956	(Get FASTA)	NCBI Sequence Viewer
	XP_007967957	(Get FASTA)	NCBI Sequence Viewer
	XP_037854553	(Get FASTA)	NCBI Sequence Viewer
	XP_037854554	(Get FASTA)	NCBI Sequence Viewer
	XP_037854555	(Get FASTA)	NCBI Sequence Viewer
	XP_037854556	(Get FASTA)	NCBI Sequence Viewer
	XP_037854557	(Get FASTA)	NCBI Sequence Viewer
	XP_037854558	(Get FASTA)	NCBI Sequence Viewer
	XP_037854559	(Get FASTA)	NCBI Sequence Viewer
	XP_037854560	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000003439.1

RefSeq Acc Id:	XP_007967956 ⟸ XM_007969765
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R4A0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007967957 ⟸ XM_007969766
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9R4A0 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCSAP00000003439 ⟸ ENSCSAT00000005210

RefSeq Acc Id:	XP_037854560 ⟸ XM_037998632
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R4A0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_037854557 ⟸ XM_037998629
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R4A0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_037854554 ⟸ XM_037998626
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R4A0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_037854555 ⟸ XM_037998627
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R4A0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_037854553 ⟸ XM_037998625
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R4A0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_037854559 ⟸ XM_037998631
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R4A0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_037854556 ⟸ XM_037998628
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R4A0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_037854558 ⟸ XM_037998630
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R4A0 (UniProtKB/TrEMBL)

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000007165	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000005210.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.900.10	UniProtKB/TrEMBL
	2.30.29.30	UniProtKB/TrEMBL
	3.30.40.10	UniProtKB/TrEMBL
InterPro	DBL_dom_sf	UniProtKB/TrEMBL
	DH-domain	UniProtKB/TrEMBL
	FGD1-4_PH2	UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/TrEMBL
	PH_domain	UniProtKB/TrEMBL
	Znf_FYVE	UniProtKB/TrEMBL
	Znf_FYVE-rel	UniProtKB/TrEMBL
	Znf_FYVE_PHD	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
KEGG Report	csab:103219761	UniProtKB/TrEMBL
NCBI Gene	FGD3	ENTREZGENE
PANTHER	FACIOGENITAL DYSPLASIA PROTEIN	UniProtKB/TrEMBL
	FYVE, RHOGEF AND PH DOMAIN-CONTAINING PROTEIN 3	UniProtKB/TrEMBL
Pfam	FYVE	UniProtKB/TrEMBL
	PF00169	UniProtKB/TrEMBL
	RhoGEF	UniProtKB/TrEMBL
PROSITE	DH_2	UniProtKB/TrEMBL
	PH_DOMAIN	UniProtKB/TrEMBL
	ZF_FYVE	UniProtKB/TrEMBL
SMART	FYVE	UniProtKB/TrEMBL
	RhoGEF	UniProtKB/TrEMBL
	SM00233	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
	SSF48065	UniProtKB/TrEMBL
	SSF57903	UniProtKB/TrEMBL
UniProt	A0A0D9R4A0	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-12-03	FGD3	FYVE, RhoGEF and PH domain containing 3	LOC103219910	uncharacterized LOC103219910	Data merged from RGD:18636920	737654	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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