SYNJ1 (synaptojanin 1) - Rat Genome Database

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Gene: SYNJ1 (synaptojanin 1) Chlorocebus sabaeus
Analyze
Symbol: SYNJ1
Name: synaptojanin 1
RGD ID: 18773663
Description: ENCODES a protein that exhibits EH domain binding (ortholog); inositol-1,4,5-trisphosphate 5-phosphatase activity (ortholog); phosphatidylinositol phosphate 5-phosphatase activity (ortholog); INVOLVED IN learning (ortholog); neurotransmitter transport (ortholog); phosphatidylinositol dephosphorylation (ortholog); PARTICIPATES IN altered clathrin-dependent synaptic vesicle endocytosis; clathrin-dependent synaptic vesicle endocytosis; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); autosomal dominant intellectual developmental disorder 7 (ortholog); developmental and epileptic encephalopathy 1 (ortholog); FOUND IN clathrin coat of coated pit (ortholog); glutamatergic synapse (ortholog); membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: synaptojanin-1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1259,421,561 - 59,523,076 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl259,422,110 - 59,523,176 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660711,959,498 - 2,063,300 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
SYNJ1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1259,421,561 - 59,523,076 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl259,422,110 - 59,523,176 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660711,959,498 - 2,063,300 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
SYNJ1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382132,628,759 - 32,728,394 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2132,628,759 - 32,728,040 (-)EnsemblGRCh38hg38GRCh38
GRCh372134,001,069 - 34,100,351 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362132,922,944 - 33,022,148 (-)NCBINCBI36Build 36hg18NCBI36
Build 342132,922,943 - 33,022,105NCBI
Celera2119,184,699 - 19,284,009 (-)NCBICelera
Cytogenetic Map21q22.11NCBI
HuRef2119,410,440 - 19,509,720 (-)NCBIHuRef
CHM1_12133,562,725 - 33,661,992 (-)NCBICHM1_1
T2T-CHM13v2.02130,994,760 - 31,094,413 (-)NCBIT2T-CHM13v2.0
Synj1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391690,732,980 - 90,810,543 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1690,732,980 - 90,808,196 (-)EnsemblGRCm39 Ensembl
GRCm381690,936,092 - 91,013,727 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1690,936,092 - 91,011,308 (-)EnsemblGRCm38mm10GRCm38
MGSCv371690,936,342 - 91,011,553 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361690,824,951 - 90,900,361 (-)NCBIMGSCv36mm8
Celera1692,017,943 - 92,093,156 (-)NCBICelera
Cytogenetic Map16C3.3NCBI
cM Map1652.18NCBI
Synj1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81143,678,709 - 43,755,526 (-)NCBIGRCr8
mRatBN7.21130,192,629 - 30,269,447 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1130,192,629 - 30,269,220 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1138,879,383 - 38,956,048 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01131,550,808 - 31,627,473 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01130,725,282 - 30,801,896 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01131,105,784 - 31,181,573 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1131,104,787 - 31,180,642 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01134,717,258 - 34,792,366 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41130,921,834 - 30,998,609 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11130,921,975 - 30,966,053 (-)NCBI
Celera1129,860,879 - 29,935,097 (-)NCBICelera
Cytogenetic Map11q11NCBI
Synj1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540732,093,479 - 32,175,795 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540732,094,076 - 32,175,676 (-)NCBIChiLan1.0ChiLan1.0
SYNJ1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22228,740,967 - 28,840,743 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12123,600,937 - 23,700,710 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02118,990,526 - 19,088,839 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12132,368,949 - 32,466,994 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2132,368,949 - 32,466,994 (-)Ensemblpanpan1.1panPan2
SYNJ1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13127,308,169 - 27,399,226 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3127,308,169 - 27,399,197 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3127,301,124 - 27,392,150 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03127,428,088 - 27,497,209 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3127,428,088 - 27,596,918 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13127,372,989 - 27,463,773 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03127,384,757 - 27,475,496 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03127,892,120 - 27,983,140 (-)NCBIUU_Cfam_GSD_1.0
Synj1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440497127,901,843 - 27,983,289 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365009,484,586 - 9,566,100 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365009,484,571 - 9,565,980 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SYNJ1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13196,230,104 - 196,330,384 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113196,230,101 - 196,330,512 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213206,240,582 - 206,342,113 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Synj1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474520,881,317 - 20,984,184 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474520,881,312 - 20,984,242 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium 32 60
Low 4 20
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_007964777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007964921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCSAT00000007734   ⟹   ENSCSAP00000005902
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl259,422,110 - 59,523,176 (+)Ensembl
RefSeq Acc Id: XM_007964777   ⟹   XP_007962968
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1259,421,561 - 59,523,076 (+)NCBI
Vero_WHO_p1.0NW_0236660711,959,498 - 2,063,300 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007964788   ⟹   XP_007962979
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1259,421,561 - 59,523,076 (+)NCBI
Vero_WHO_p1.0NW_0236660711,959,498 - 2,063,298 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007964793   ⟹   XP_007962984
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1259,421,561 - 59,523,076 (+)NCBI
Vero_WHO_p1.0NW_0236660711,959,498 - 2,063,300 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007964813   ⟹   XP_007963004
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1259,421,561 - 59,523,076 (+)NCBI
Vero_WHO_p1.0NW_0236660711,959,498 - 2,061,060 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007964833   ⟹   XP_007963024
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1259,422,149 - 59,523,076 (+)NCBI
Vero_WHO_p1.0NW_0236660711,961,927 - 2,063,300 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007964839   ⟹   XP_007963030
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1259,422,349 - 59,523,076 (+)NCBI
Vero_WHO_p1.0NW_0236660711,962,147 - 2,063,300 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007964859   ⟹   XP_007963050
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1259,422,149 - 59,523,076 (+)NCBI
Vero_WHO_p1.0NW_0236660711,961,927 - 2,063,300 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007964865   ⟹   XP_007963056
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1259,421,561 - 59,523,076 (+)NCBI
Vero_WHO_p1.0NW_0236660711,959,498 - 2,063,300 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007964868   ⟹   XP_007963059
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1259,422,149 - 59,523,076 (+)NCBI
Vero_WHO_p1.0NW_0236660711,961,927 - 2,062,490 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007964872   ⟹   XP_007963063
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1259,422,149 - 59,523,076 (+)NCBI
Vero_WHO_p1.0NW_0236660711,961,927 - 2,061,060 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007964898   ⟹   XP_007963089
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1259,421,561 - 59,523,074 (+)NCBI
Vero_WHO_p1.0NW_0236660711,959,498 - 2,062,490 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007964918   ⟹   XP_007963109
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1259,421,561 - 59,523,074 (+)NCBI
Vero_WHO_p1.0NW_0236660711,959,498 - 2,061,669 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007964921   ⟹   XP_007963112
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1259,422,149 - 59,523,074 (+)NCBI
Vero_WHO_p1.0NW_0236660711,961,927 - 2,063,298 (+)NCBI
Sequence:
RefSeq Acc Id: XM_037990607   ⟹   XP_037846535
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660711,962,987 - 2,063,300 (+)NCBI
RefSeq Acc Id: XM_037990608   ⟹   XP_037846536
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660711,962,987 - 2,063,300 (+)NCBI
RefSeq Acc Id: XM_037990609   ⟹   XP_037846537
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660711,962,987 - 2,063,300 (+)NCBI
RefSeq Acc Id: XM_037990610   ⟹   XP_037846538
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660711,962,987 - 2,063,300 (+)NCBI
RefSeq Acc Id: XM_037990611   ⟹   XP_037846539
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660711,962,987 - 2,063,300 (+)NCBI
RefSeq Acc Id: XM_037990613   ⟹   XP_037846541
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660711,962,987 - 2,063,300 (+)NCBI
RefSeq Acc Id: XM_037990614   ⟹   XP_037846542
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660711,962,987 - 2,063,300 (+)NCBI
RefSeq Acc Id: XM_037990615   ⟹   XP_037846543
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660711,962,387 - 2,063,300 (+)NCBI
RefSeq Acc Id: XM_037990617   ⟹   XP_037846545
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660711,962,987 - 2,060,711 (+)NCBI
RefSeq Acc Id: XM_037990618   ⟹   XP_037846546
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660711,962,987 - 2,057,179 (+)NCBI
RefSeq Acc Id: XM_037990619   ⟹   XP_037846547
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660711,962,987 - 2,060,484 (+)NCBI
RefSeq Acc Id: XM_037990620   ⟹   XP_037846548
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660711,962,987 - 2,057,179 (+)NCBI
RefSeq Acc Id: XM_037990621   ⟹   XP_037846549
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660711,962,987 - 2,060,711 (+)NCBI
RefSeq Acc Id: XM_037990622   ⟹   XP_037846550
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660711,959,498 - 2,060,711 (+)NCBI
RefSeq Acc Id: XM_037990623   ⟹   XP_037846551
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660711,998,086 - 2,063,300 (+)NCBI
RefSeq Acc Id: XM_037990624   ⟹   XP_037846552
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660711,962,965 - 2,063,300 (+)NCBI
Protein Sequences
Protein RefSeqs XP_007962968 (Get FASTA)   NCBI Sequence Viewer  
  XP_007962979 (Get FASTA)   NCBI Sequence Viewer  
  XP_007962984 (Get FASTA)   NCBI Sequence Viewer  
  XP_007963004 (Get FASTA)   NCBI Sequence Viewer  
  XP_007963024 (Get FASTA)   NCBI Sequence Viewer  
  XP_007963030 (Get FASTA)   NCBI Sequence Viewer  
  XP_007963050 (Get FASTA)   NCBI Sequence Viewer  
  XP_007963056 (Get FASTA)   NCBI Sequence Viewer  
  XP_007963059 (Get FASTA)   NCBI Sequence Viewer  
  XP_007963063 (Get FASTA)   NCBI Sequence Viewer  
  XP_007963089 (Get FASTA)   NCBI Sequence Viewer  
  XP_007963109 (Get FASTA)   NCBI Sequence Viewer  
  XP_007963112 (Get FASTA)   NCBI Sequence Viewer  
  XP_037846535 (Get FASTA)   NCBI Sequence Viewer  
  XP_037846536 (Get FASTA)   NCBI Sequence Viewer  
  XP_037846537 (Get FASTA)   NCBI Sequence Viewer  
  XP_037846538 (Get FASTA)   NCBI Sequence Viewer  
  XP_037846539 (Get FASTA)   NCBI Sequence Viewer  
  XP_037846541 (Get FASTA)   NCBI Sequence Viewer  
  XP_037846542 (Get FASTA)   NCBI Sequence Viewer  
  XP_037846543 (Get FASTA)   NCBI Sequence Viewer  
  XP_037846545 (Get FASTA)   NCBI Sequence Viewer  
  XP_037846546 (Get FASTA)   NCBI Sequence Viewer  
  XP_037846547 (Get FASTA)   NCBI Sequence Viewer  
  XP_037846548 (Get FASTA)   NCBI Sequence Viewer  
  XP_037846549 (Get FASTA)   NCBI Sequence Viewer  
  XP_037846550 (Get FASTA)   NCBI Sequence Viewer  
  XP_037846551 (Get FASTA)   NCBI Sequence Viewer  
  XP_037846552 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000005902.1
RefSeq Acc Id: XP_007962968   ⟸   XM_007964777
- Peptide Label: isoform X3
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007962984   ⟸   XM_007964793
- Peptide Label: isoform X7
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007963056   ⟸   XM_007964865
- Peptide Label: isoform X15
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007962979   ⟸   XM_007964788
- Peptide Label: isoform X5
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007963004   ⟸   XM_007964813
- Peptide Label: isoform X9
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007963109   ⟸   XM_007964918
- Peptide Label: isoform X23
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007963089   ⟸   XM_007964898
- Peptide Label: isoform X19
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007963024   ⟸   XM_007964833
- Peptide Label: isoform X12
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007963050   ⟸   XM_007964859
- Peptide Label: isoform X14
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007963059   ⟸   XM_007964868
- Peptide Label: isoform X16
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007963063   ⟸   XM_007964872
- Peptide Label: isoform X13
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007963112   ⟸   XM_007964921
- Peptide Label: isoform X24
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007963030   ⟸   XM_007964839
- Peptide Label: isoform X12
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCSAP00000005902   ⟸   ENSCSAT00000007734
RefSeq Acc Id: XP_037846550   ⟸   XM_037990622
- Peptide Label: isoform X21
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037846543   ⟸   XM_037990615
- Peptide Label: isoform X12
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037846552   ⟸   XM_037990624
- Peptide Label: isoform X22
RefSeq Acc Id: XP_037846535   ⟸   XM_037990607
- Peptide Label: isoform X1
RefSeq Acc Id: XP_037846539   ⟸   XM_037990611
- Peptide Label: isoform X8
RefSeq Acc Id: XP_037846538   ⟸   XM_037990610
- Peptide Label: isoform X6
RefSeq Acc Id: XP_037846541   ⟸   XM_037990613
- Peptide Label: isoform X10
RefSeq Acc Id: XP_037846542   ⟸   XM_037990614
- Peptide Label: isoform X11
RefSeq Acc Id: XP_037846537   ⟸   XM_037990609
- Peptide Label: isoform X4
RefSeq Acc Id: XP_037846536   ⟸   XM_037990608
- Peptide Label: isoform X2
RefSeq Acc Id: XP_037846545   ⟸   XM_037990617
- Peptide Label: isoform X17
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037846549   ⟸   XM_037990621
- Peptide Label: isoform X20
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037846547   ⟸   XM_037990619
- Peptide Label: isoform X18
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037846546   ⟸   XM_037990618
- Peptide Label: isoform X17
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037846548   ⟸   XM_037990620
- Peptide Label: isoform X18
- UniProtKB: A0A0D9RBB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037846551   ⟸   XM_037990623
- Peptide Label: isoform X22


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000009654 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000007734.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.330 UniProtKB/TrEMBL
  3.60.10.10 UniProtKB/TrEMBL
InterPro DUF1866 UniProtKB/TrEMBL
  Endo/exonu/phosph_ase_sf UniProtKB/TrEMBL
  IP5 UniProtKB/TrEMBL
  IPPc UniProtKB/TrEMBL
  Nucleotide-bd_a/b_plait_sf UniProtKB/TrEMBL
  RBD_domain_sf UniProtKB/TrEMBL
  RRM_dom UniProtKB/TrEMBL
  SAC_dom UniProtKB/TrEMBL
  SYNJ1_RRM UniProtKB/TrEMBL
NCBI Gene SYNJ1 ENTREZGENE
PANTHER INOSITOL 5-PHOSPHATASE UniProtKB/TrEMBL
  PTHR11200:SF158 UniProtKB/TrEMBL
Pfam DUF1866 UniProtKB/TrEMBL
  Syja_N UniProtKB/TrEMBL
PROSITE RRM UniProtKB/TrEMBL
  SAC UniProtKB/TrEMBL
SMART DUF1866 UniProtKB/TrEMBL
  IPPc UniProtKB/TrEMBL
Superfamily-SCOP SSF54928 UniProtKB/TrEMBL
  SSF56219 UniProtKB/TrEMBL
UniProt A0A0D9RBB3 ENTREZGENE, UniProtKB/TrEMBL