SYNJ1 (synaptojanin 1) - Rat Genome Database

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Gene: SYNJ1 (synaptojanin 1) Sus scrofa
Analyze
Symbol: SYNJ1
Name: synaptojanin 1
RGD ID: 14013353
Description: ENCODES a protein that exhibits EH domain binding (ortholog); inositol-1,4,5-trisphosphate 5-phosphatase activity (ortholog); phosphatidylinositol phosphate 5-phosphatase activity (ortholog); INVOLVED IN learning (ortholog); neurotransmitter transport (ortholog); phosphatidylinositol dephosphorylation (ortholog); PARTICIPATES IN altered clathrin-dependent synaptic vesicle endocytosis; clathrin-dependent synaptic vesicle endocytosis; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); autosomal dominant intellectual developmental disorder 7 (ortholog); developmental and epileptic encephalopathy 1 (ortholog); FOUND IN clathrin coat of coated pit (ortholog); glutamatergic synapse (ortholog); membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: synaptojanin-1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13196,230,104 - 196,330,384 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113196,230,101 - 196,330,512 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213206,240,582 - 206,342,113 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
SYNJ1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13196,230,104 - 196,330,384 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113196,230,101 - 196,330,512 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213206,240,582 - 206,342,113 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SYNJ1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382132,628,759 - 32,728,394 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2132,628,759 - 32,728,040 (-)EnsemblGRCh38hg38GRCh38
GRCh372134,001,069 - 34,100,351 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362132,922,944 - 33,022,148 (-)NCBINCBI36Build 36hg18NCBI36
Build 342132,922,943 - 33,022,105NCBI
Celera2119,184,699 - 19,284,009 (-)NCBICelera
Cytogenetic Map21q22.11NCBI
HuRef2119,410,440 - 19,509,720 (-)NCBIHuRef
CHM1_12133,562,725 - 33,661,992 (-)NCBICHM1_1
T2T-CHM13v2.02130,994,760 - 31,094,413 (-)NCBIT2T-CHM13v2.0
Synj1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391690,732,980 - 90,810,543 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1690,732,980 - 90,808,196 (-)EnsemblGRCm39 Ensembl
GRCm381690,936,092 - 91,013,727 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1690,936,092 - 91,011,308 (-)EnsemblGRCm38mm10GRCm38
MGSCv371690,936,342 - 91,011,553 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361690,824,951 - 90,900,361 (-)NCBIMGSCv36mm8
Celera1692,017,943 - 92,093,156 (-)NCBICelera
Cytogenetic Map16C3.3NCBI
cM Map1652.18NCBI
Synj1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81143,678,709 - 43,755,526 (-)NCBIGRCr8
mRatBN7.21130,192,629 - 30,269,447 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1130,192,629 - 30,269,220 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1138,879,383 - 38,956,048 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01131,550,808 - 31,627,473 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01130,725,282 - 30,801,896 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01131,105,784 - 31,181,573 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1131,104,787 - 31,180,642 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01134,717,258 - 34,792,366 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41130,921,834 - 30,998,609 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11130,921,975 - 30,966,053 (-)NCBI
Celera1129,860,879 - 29,935,097 (-)NCBICelera
Cytogenetic Map11q11NCBI
Synj1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540732,093,479 - 32,175,795 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540732,094,076 - 32,175,676 (-)NCBIChiLan1.0ChiLan1.0
SYNJ1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22228,740,967 - 28,840,743 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12123,600,937 - 23,700,710 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02118,990,526 - 19,088,839 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12132,368,949 - 32,466,994 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2132,368,949 - 32,466,994 (-)Ensemblpanpan1.1panPan2
SYNJ1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13127,308,169 - 27,399,226 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3127,308,169 - 27,399,197 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3127,301,124 - 27,392,150 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03127,428,088 - 27,497,209 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3127,428,088 - 27,596,918 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13127,372,989 - 27,463,773 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03127,384,757 - 27,475,496 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03127,892,120 - 27,983,140 (-)NCBIUU_Cfam_GSD_1.0
Synj1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440497127,901,843 - 27,983,289 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365009,484,586 - 9,566,100 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365009,484,571 - 9,565,980 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SYNJ1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1259,421,561 - 59,523,076 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl259,422,110 - 59,523,176 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660711,959,498 - 2,063,300 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Synj1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474520,881,317 - 20,984,184 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474520,881,312 - 20,984,242 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SYNJ1
4771 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 1 1 1 3 21 2
Low 9 3 2 2 2 2 2 3 1
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_013982558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013982560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013982561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013982563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013982564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013982566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013982568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013982569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013982570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013982571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013982572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021070921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021070922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021070923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021070924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021070925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021070926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021070927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021070928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021070929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021070930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021070932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021070933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU927935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GFLN01006955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSSSCT00000013167   ⟹   ENSSSCP00000012817
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl13196,230,106 - 196,330,370 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000037896   ⟹   ENSSSCP00000059529
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl13196,230,106 - 196,330,376 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000051945   ⟹   ENSSSCP00000036587
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl13196,230,114 - 196,330,374 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000060074   ⟹   ENSSSCP00000051758
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl13196,230,104 - 196,330,380 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000064998   ⟹   ENSSSCP00000037988
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl13196,239,323 - 196,330,384 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000071315   ⟹   ENSSSCP00000074033
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl13196,235,923 - 196,330,384 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000092982   ⟹   ENSSSCP00000075472
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl13196,230,104 - 196,330,380 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000094870   ⟹   ENSSSCP00000074750
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl13196,235,923 - 196,330,384 (-)Ensembl
RefSeq Acc Id: XM_013982558   ⟹   XP_013838012
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,101 - 196,330,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013982560   ⟹   XP_013838014
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,101 - 196,330,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013982561   ⟹   XP_013838015
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,101 - 196,330,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013982563   ⟹   XP_013838017
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,101 - 196,330,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013982564   ⟹   XP_013838018
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,101 - 196,330,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013982566   ⟹   XP_013838020
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,102 - 196,330,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013982568   ⟹   XP_013838022
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,101 - 196,330,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013982569   ⟹   XP_013838023
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,101 - 196,330,512 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013982570   ⟹   XP_013838024
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,101 - 196,330,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013982571   ⟹   XP_013838025
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,101 - 196,330,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013982572   ⟹   XP_013838026
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,101 - 196,330,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021070921   ⟹   XP_020926580
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,102 - 196,330,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021070922   ⟹   XP_020926581
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,102 - 196,330,380 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021070923   ⟹   XP_020926582
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,101 - 196,330,384 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021070924   ⟹   XP_020926583
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,102 - 196,330,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021070925   ⟹   XP_020926584
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,102 - 196,330,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021070926   ⟹   XP_020926585
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,102 - 196,330,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021070927   ⟹   XP_020926586
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,101 - 196,330,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021070928   ⟹   XP_020926587
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,102 - 196,330,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021070929   ⟹   XP_020926588
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,102 - 196,330,374 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021070930   ⟹   XP_020926589
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,102 - 196,330,364 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021070932   ⟹   XP_020926591
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,102 - 196,330,376 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021070933   ⟹   XP_020926592
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113196,230,102 - 196,330,511 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013838012 (Get FASTA)   NCBI Sequence Viewer  
  XP_013838014 (Get FASTA)   NCBI Sequence Viewer  
  XP_013838015 (Get FASTA)   NCBI Sequence Viewer  
  XP_013838017 (Get FASTA)   NCBI Sequence Viewer  
  XP_013838018 (Get FASTA)   NCBI Sequence Viewer  
  XP_013838020 (Get FASTA)   NCBI Sequence Viewer  
  XP_013838022 (Get FASTA)   NCBI Sequence Viewer  
  XP_013838023 (Get FASTA)   NCBI Sequence Viewer  
  XP_013838024 (Get FASTA)   NCBI Sequence Viewer  
  XP_013838025 (Get FASTA)   NCBI Sequence Viewer  
  XP_013838026 (Get FASTA)   NCBI Sequence Viewer  
  XP_020926580 (Get FASTA)   NCBI Sequence Viewer  
  XP_020926581 (Get FASTA)   NCBI Sequence Viewer  
  XP_020926582 (Get FASTA)   NCBI Sequence Viewer  
  XP_020926583 (Get FASTA)   NCBI Sequence Viewer  
  XP_020926584 (Get FASTA)   NCBI Sequence Viewer  
  XP_020926585 (Get FASTA)   NCBI Sequence Viewer  
  XP_020926586 (Get FASTA)   NCBI Sequence Viewer  
  XP_020926587 (Get FASTA)   NCBI Sequence Viewer  
  XP_020926588 (Get FASTA)   NCBI Sequence Viewer  
  XP_020926589 (Get FASTA)   NCBI Sequence Viewer  
  XP_020926591 (Get FASTA)   NCBI Sequence Viewer  
  XP_020926592 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000012817.4
  ENSSSCP00000036587
  ENSSSCP00000036587.3
  ENSSSCP00000037988.2
  ENSSSCP00000051758
  ENSSSCP00000051758.2
  ENSSSCP00000059529
  ENSSSCP00000059529.3
  ENSSSCP00000074033.1
  ENSSSCP00000074750
  ENSSSCP00000074750.1
  ENSSSCP00000075472
  ENSSSCP00000075472.1
  ENSSSCP00015029695.1
  ENSSSCP00015029752.1
  ENSSSCP00015029795.1
  ENSSSCP00015029849.1
  ENSSSCP00015029917.1
  ENSSSCP00015029969.1
  ENSSSCP00025013720.1
  ENSSSCP00025013845.1
  ENSSSCP00025013996.1
  ENSSSCP00025014381.1
  ENSSSCP00025014608.1
  ENSSSCP00025014790.1
  ENSSSCP00030006359.1
  ENSSSCP00030006363.1
  ENSSSCP00030006367.1
  ENSSSCP00030006377.1
  ENSSSCP00030006381.1
  ENSSSCP00030006396.1
  ENSSSCP00030006401.1
  ENSSSCP00035017227.1
  ENSSSCP00035017232.1
  ENSSSCP00035017234.1
  ENSSSCP00035017237.1
  ENSSSCP00035017241.1
  ENSSSCP00035017244.1
  ENSSSCP00040033225.1
  ENSSSCP00040033396.1
  ENSSSCP00040033696.1
  ENSSSCP00040033856.1
  ENSSSCP00040034022.1
  ENSSSCP00040034160.1
  ENSSSCP00045027169.1
  ENSSSCP00045027390.1
  ENSSSCP00045027654.1
  ENSSSCP00045027862.1
  ENSSSCP00045028082.1
  ENSSSCP00045028302.1
  ENSSSCP00045028575.1
  ENSSSCP00045028857.1
  ENSSSCP00050029824.1
  ENSSSCP00055030485.1
  ENSSSCP00055030802.1
  ENSSSCP00055031145.1
  ENSSSCP00055031386.1
  ENSSSCP00055031587.1
  ENSSSCP00055031738.1
  ENSSSCP00055031976.1
  ENSSSCP00065041791.1
  ENSSSCP00065041817.1
  ENSSSCP00065041828.1
  ENSSSCP00065041845.1
  ENSSSCP00065041857.1
  ENSSSCP00065041868.1
  ENSSSCP00070022591.1
  ENSSSCP00070022605.1
  ENSSSCP00070022615.1
  ENSSSCP00070022678.1
  ENSSSCP00070022696.1
RefSeq Acc Id: XP_013838023   ⟸   XM_013982569
- Peptide Label: isoform X21
- UniProtKB: A0A8D1L0K7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020926586   ⟸   XM_021070927
- Peptide Label: isoform X16
- UniProtKB: A0A8D0ZMQ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013838024   ⟸   XM_013982570
- Peptide Label: isoform X22
- UniProtKB: A0A287B624 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013838026   ⟸   XM_013982572
- Peptide Label: isoform X14
- UniProtKB: A0A8D0ZMQ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013838025   ⟸   XM_013982571
- Peptide Label: isoform X5
- UniProtKB: A0A8D0ZMP8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013838017   ⟸   XM_013982563
- Peptide Label: isoform X4
- UniProtKB: A0A8D0ZMP8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013838015   ⟸   XM_013982561
- Peptide Label: isoform X3
- UniProtKB: A0A287B624 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013838014   ⟸   XM_013982560
- Peptide Label: isoform X2
- UniProtKB: A0A287B624 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013838022   ⟸   XM_013982568
- Peptide Label: isoform X13
- UniProtKB: A0A8D0ZMQ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013838012   ⟸   XM_013982558
- Peptide Label: isoform X1
- UniProtKB: A0A8D1L0K7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013838018   ⟸   XM_013982564
- Peptide Label: isoform X9
- UniProtKB: A0A8D0ZN26 (UniProtKB/TrEMBL),   A0A8D1MYR4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020926582   ⟸   XM_021070923
- Peptide Label: isoform X8
- UniProtKB: A0A8D0ZMP8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020926580   ⟸   XM_021070921
- Peptide Label: isoform X6
- UniProtKB: A0A8D0ZMP8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020926585   ⟸   XM_021070926
- Peptide Label: isoform X15
- UniProtKB: A0A8D0ZMQ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020926584   ⟸   XM_021070925
- Peptide Label: isoform X12
- UniProtKB: A0A8D1I147 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020926583   ⟸   XM_021070924
- Peptide Label: isoform X11
- UniProtKB: A0A8D0ZN26 (UniProtKB/TrEMBL),   A0A8D1MYR4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020926592   ⟸   XM_021070933
- Peptide Label: isoform X23
- UniProtKB: A0A8D0ZMQ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020926587   ⟸   XM_021070928
- Peptide Label: isoform X17
- UniProtKB: A0A8D0ZMQ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013838020   ⟸   XM_013982566
- Peptide Label: isoform X10
- UniProtKB: A0A8D1I147 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020926581   ⟸   XM_021070922
- Peptide Label: isoform X7
- UniProtKB: A0A8D0ZMP8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020926591   ⟸   XM_021070932
- Peptide Label: isoform X20
- UniProtKB: A0A287BSN1 (UniProtKB/TrEMBL),   A0A8D0ZMQ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020926588   ⟸   XM_021070929
- Peptide Label: isoform X18
- UniProtKB: A0A286ZYK1 (UniProtKB/TrEMBL),   A0A8D0ZN26 (UniProtKB/TrEMBL),   A0A8D1MYR4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020926589   ⟸   XM_021070930
- Peptide Label: isoform X19
- UniProtKB: A0A8D1I147 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000037988   ⟸   ENSSSCT00000064998
RefSeq Acc Id: ENSSSCP00000051758   ⟸   ENSSSCT00000060074
RefSeq Acc Id: ENSSSCP00000036587   ⟸   ENSSSCT00000051945
RefSeq Acc Id: ENSSSCP00000012817   ⟸   ENSSSCT00000013167
RefSeq Acc Id: ENSSSCP00000074033   ⟸   ENSSSCT00000071315
RefSeq Acc Id: ENSSSCP00000059529   ⟸   ENSSSCT00000037896
RefSeq Acc Id: ENSSSCP00000074750   ⟸   ENSSSCT00000094870
RefSeq Acc Id: ENSSSCP00000075472   ⟸   ENSSSCT00000092982
Protein Domains
RRM   SAC


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000012035 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015055112 UniProtKB/TrEMBL
  ENSSSCG00025024207 UniProtKB/TrEMBL
  ENSSSCG00030010332 UniProtKB/TrEMBL
  ENSSSCG00035032513 UniProtKB/TrEMBL
  ENSSSCG00040057007 UniProtKB/TrEMBL
  ENSSSCG00045022832 UniProtKB/TrEMBL
  ENSSSCG00050050956 UniProtKB/TrEMBL
  ENSSSCG00055019550 UniProtKB/TrEMBL
  ENSSSCG00065069530 UniProtKB/TrEMBL
  ENSSSCG00070013750 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000013167.5 UniProtKB/TrEMBL
  ENSSSCT00000037896 ENTREZGENE
  ENSSSCT00000037896.3 UniProtKB/TrEMBL
  ENSSSCT00000051945 ENTREZGENE
  ENSSSCT00000051945.3 UniProtKB/TrEMBL
  ENSSSCT00000060074 ENTREZGENE
  ENSSSCT00000060074.2 UniProtKB/TrEMBL
  ENSSSCT00000064998.3 UniProtKB/TrEMBL
  ENSSSCT00000071315.2 UniProtKB/TrEMBL
  ENSSSCT00000092982 ENTREZGENE
  ENSSSCT00000092982.1 UniProtKB/TrEMBL
  ENSSSCT00000094870 ENTREZGENE
  ENSSSCT00000094870.1 UniProtKB/TrEMBL
  ENSSSCT00015073982.1 UniProtKB/TrEMBL
  ENSSSCT00015074103.1 UniProtKB/TrEMBL
  ENSSSCT00015074220.1 UniProtKB/TrEMBL
  ENSSSCT00015074397.1 UniProtKB/TrEMBL
  ENSSSCT00015074581.1 UniProtKB/TrEMBL
  ENSSSCT00015074719.1 UniProtKB/TrEMBL
  ENSSSCT00025032875.1 UniProtKB/TrEMBL
  ENSSSCT00025033207.1 UniProtKB/TrEMBL
  ENSSSCT00025033618.1 UniProtKB/TrEMBL
  ENSSSCT00025034520.1 UniProtKB/TrEMBL
  ENSSSCT00025035047.1 UniProtKB/TrEMBL
  ENSSSCT00025035435.1 UniProtKB/TrEMBL
  ENSSSCT00030014197.1 UniProtKB/TrEMBL
  ENSSSCT00030014207.1 UniProtKB/TrEMBL
  ENSSSCT00030014216.1 UniProtKB/TrEMBL
  ENSSSCT00030014235.1 UniProtKB/TrEMBL
  ENSSSCT00030014246.1 UniProtKB/TrEMBL
  ENSSSCT00030014268.1 UniProtKB/TrEMBL
  ENSSSCT00030014276.1 UniProtKB/TrEMBL
  ENSSSCT00035043082.1 UniProtKB/TrEMBL
  ENSSSCT00035043091.1 UniProtKB/TrEMBL
  ENSSSCT00035043094.1 UniProtKB/TrEMBL
  ENSSSCT00035043102.1 UniProtKB/TrEMBL
  ENSSSCT00035043108.1 UniProtKB/TrEMBL
  ENSSSCT00035043116.1 UniProtKB/TrEMBL
  ENSSSCT00040077299.1 UniProtKB/TrEMBL
  ENSSSCT00040077614.1 UniProtKB/TrEMBL
  ENSSSCT00040078194.1 UniProtKB/TrEMBL
  ENSSSCT00040078488.1 UniProtKB/TrEMBL
  ENSSSCT00040078842.1 UniProtKB/TrEMBL
  ENSSSCT00040079138.1 UniProtKB/TrEMBL
  ENSSSCT00045039054.1 UniProtKB/TrEMBL
  ENSSSCT00045039374.1 UniProtKB/TrEMBL
  ENSSSCT00045039721.1 UniProtKB/TrEMBL
  ENSSSCT00045039994.1 UniProtKB/TrEMBL
  ENSSSCT00045040327.1 UniProtKB/TrEMBL
  ENSSSCT00045040688.1 UniProtKB/TrEMBL
  ENSSSCT00045041165.1 UniProtKB/TrEMBL
  ENSSSCT00045041594.1 UniProtKB/TrEMBL
  ENSSSCT00050069403.1 UniProtKB/TrEMBL
  ENSSSCT00055038372.1 UniProtKB/TrEMBL
  ENSSSCT00055038755.1 UniProtKB/TrEMBL
  ENSSSCT00055039167.1 UniProtKB/TrEMBL
  ENSSSCT00055039455.1 UniProtKB/TrEMBL
  ENSSSCT00055039709.1 UniProtKB/TrEMBL
  ENSSSCT00055039909.1 UniProtKB/TrEMBL
  ENSSSCT00055040185.1 UniProtKB/TrEMBL
  ENSSSCT00065095497.1 UniProtKB/TrEMBL
  ENSSSCT00065095543.1 UniProtKB/TrEMBL
  ENSSSCT00065095570.1 UniProtKB/TrEMBL
  ENSSSCT00065095602.1 UniProtKB/TrEMBL
  ENSSSCT00065095635.1 UniProtKB/TrEMBL
  ENSSSCT00065095662.1 UniProtKB/TrEMBL
  ENSSSCT00070027158.1 UniProtKB/TrEMBL
  ENSSSCT00070027174.1 UniProtKB/TrEMBL
  ENSSSCT00070027185.1 UniProtKB/TrEMBL
  ENSSSCT00070027276.1 UniProtKB/TrEMBL
  ENSSSCT00070027294.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.330 UniProtKB/TrEMBL
  3.60.10.10 UniProtKB/TrEMBL
InterPro DUF1866 UniProtKB/TrEMBL
  Endo/exonu/phosph_ase_sf UniProtKB/TrEMBL
  IP5 UniProtKB/TrEMBL
  IPPc UniProtKB/TrEMBL
  Nucleotide-bd_a/b_plait_sf UniProtKB/TrEMBL
  RBD_domain_sf UniProtKB/TrEMBL
  RRM_dom UniProtKB/TrEMBL
  SAC_dom UniProtKB/TrEMBL
  SYNJ1_RRM UniProtKB/TrEMBL
NCBI Gene SYNJ1 ENTREZGENE
PANTHER INOSITOL 5-PHOSPHATASE UniProtKB/TrEMBL
  PTHR11200:SF158 UniProtKB/TrEMBL
Pfam DUF1866 UniProtKB/TrEMBL
  Syja_N UniProtKB/TrEMBL
PRINTS PRICHEXTENSN UniProtKB/TrEMBL
PROSITE RRM UniProtKB/TrEMBL
  SAC UniProtKB/TrEMBL
SMART DUF1866 UniProtKB/TrEMBL
  IPPc UniProtKB/TrEMBL
Superfamily-SCOP SSF54928 UniProtKB/TrEMBL
  SSF56219 UniProtKB/TrEMBL
UniProt A0A286ZYK1 ENTREZGENE, UniProtKB/TrEMBL
  A0A287A230_PIG UniProtKB/TrEMBL
  A0A287B624 ENTREZGENE, UniProtKB/TrEMBL
  A0A287BSN1 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1U3R1_PIG UniProtKB/TrEMBL
  A0A4X1U457_PIG UniProtKB/TrEMBL
  A0A4X1U4C5_PIG UniProtKB/TrEMBL
  A0A4X1U4E0_PIG UniProtKB/TrEMBL
  A0A5G2RGC5_PIG UniProtKB/TrEMBL
  A0A8D0P8S3_PIG UniProtKB/TrEMBL
  A0A8D0PEV8_PIG UniProtKB/TrEMBL
  A0A8D0RDT0_PIG UniProtKB/TrEMBL
  A0A8D0U6S6_PIG UniProtKB/TrEMBL
  A0A8D0U6U1_PIG UniProtKB/TrEMBL
  A0A8D0U7B0_PIG UniProtKB/TrEMBL
  A0A8D0VIG3_PIG UniProtKB/TrEMBL
  A0A8D0VJ36_PIG UniProtKB/TrEMBL
  A0A8D0ZI82_PIG UniProtKB/TrEMBL
  A0A8D0ZMP8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0ZMQ7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0ZN26 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1CSK4_PIG UniProtKB/TrEMBL
  A0A8D1F7C0_PIG UniProtKB/TrEMBL
  A0A8D1FAC7_PIG UniProtKB/TrEMBL
  A0A8D1FB17_PIG UniProtKB/TrEMBL
  A0A8D1FEP1_PIG UniProtKB/TrEMBL
  A0A8D1FF43_PIG UniProtKB/TrEMBL
  A0A8D1I147 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1I3X9_PIG UniProtKB/TrEMBL
  A0A8D1I462_PIG UniProtKB/TrEMBL
  A0A8D1I4Z6_PIG UniProtKB/TrEMBL
  A0A8D1KGL0_PIG UniProtKB/TrEMBL
  A0A8D1L0K7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1MYR4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1R587_PIG UniProtKB/TrEMBL
  A0A8D1RDD6_PIG UniProtKB/TrEMBL
  A0A8W4F846_PIG UniProtKB/TrEMBL
  A0A8W4F8W9_PIG UniProtKB/TrEMBL
  F1SHM3_PIG UniProtKB/TrEMBL
VGNC ID VGNC:93668 ENTREZGENE