CCDC14 (coiled-coil domain containing 14) - Rat Genome Database

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Gene: CCDC14 (coiled-coil domain containing 14) Chlorocebus sabaeus
Analyze
Symbol: CCDC14
Name: coiled-coil domain containing 14
RGD ID: 18731625
Description: INVOLVED IN protein localization to centrosome (ortholog); substantia nigra development (ortholog); ASSOCIATED WITH alkaptonuria (ortholog); familial hypocalciuric hypercalcemia (ortholog); Familial Thoracic Aortic Aneurysm 7 (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: coiled-coil domain-containing protein 14
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12256,889,424 - 56,939,915 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666041109,404,098 - 109,459,149 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
CCDC14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12256,889,424 - 56,939,915 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666041109,404,098 - 109,459,149 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
CCDC14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383123,885,176 - 123,961,229 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3123,897,305 - 123,961,408 (-)EnsemblGRCh38hg38GRCh38
GRCh373123,632,269 - 123,680,076 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363125,115,257 - 125,158,620 (-)NCBINCBI36Build 36hg18NCBI36
Build 343125,115,257 - 125,158,620NCBI
Celera3122,039,702 - 122,087,793 (-)NCBICelera
Cytogenetic Map3q21.1NCBI
HuRef3121,005,827 - 121,054,097 (-)NCBIHuRef
CHM1_13123,595,278 - 123,643,264 (-)NCBICHM1_1
T2T-CHM13v2.03126,611,315 - 126,687,354 (-)NCBIT2T-CHM13v2.0
Ccdc14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391634,510,940 - 34,545,574 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1634,510,986 - 34,545,572 (+)EnsemblGRCm39 Ensembl
GRCm381634,690,557 - 34,725,204 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1634,690,616 - 34,725,202 (+)EnsemblGRCm38mm10GRCm38
MGSCv371634,690,702 - 34,725,280 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361634,610,457 - 34,631,163 (+)NCBIMGSCv36mm8
Celera1635,157,616 - 35,192,194 (+)NCBICelera
Cytogenetic Map16B3NCBI
cM Map1624.46NCBI
Ccdc14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81179,557,267 - 79,593,128 (-)NCBIGRCr8
mRatBN7.21166,052,063 - 66,087,915 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1166,052,620 - 66,087,956 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01169,281,000 - 69,316,897 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1169,281,554 - 69,316,848 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01172,371,494 - 72,407,318 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41167,872,420 - 67,905,568 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1165,506,401 - 65,542,295 (-)NCBICelera
Cytogenetic Map11q22NCBI
Ccdc14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542723,042,648 - 23,095,151 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542723,043,001 - 23,095,201 (-)NCBIChiLan1.0ChiLan1.0
CCDC14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22121,875,431 - 121,923,161 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13121,880,207 - 121,927,911 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03121,018,879 - 121,066,563 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13127,918,294 - 127,965,906 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3127,918,294 - 127,965,906 (-)Ensemblpanpan1.1panPan2
CCDC14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13326,958,752 - 27,009,159 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3326,959,430 - 27,009,436 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3326,980,339 - 27,031,888 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03327,192,107 - 27,243,694 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3327,191,567 - 27,243,799 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13326,988,028 - 27,039,513 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03327,032,247 - 27,083,826 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03327,644,852 - 27,701,025 (-)NCBIUU_Cfam_GSD_1.0
Ccdc14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602127,365,499 - 127,426,632 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367251,273,946 - 1,331,109 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367251,273,984 - 1,331,096 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CCDC14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13136,438,967 - 136,486,496 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113136,439,015 - 136,502,604 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213145,971,225 - 146,005,171 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Ccdc14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249122,269,829 - 2,317,154 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249122,270,467 - 2,316,998 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_007985573   ⟹   XP_007983764
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12256,889,424 - 56,939,915 (+)NCBI
Vero_WHO_p1.0NW_023666041109,404,098 - 109,459,149 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038003422   ⟹   XP_037859350
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666041109,404,098 - 109,459,149 (-)NCBI
RefSeq Acc Id: XM_038003423   ⟹   XP_037859351
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666041109,404,098 - 109,458,673 (-)NCBI
RefSeq Acc Id: XM_038003424   ⟹   XP_037859352
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666041109,404,098 - 109,459,149 (-)NCBI
RefSeq Acc Id: XM_038003425   ⟹   XP_037859353
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666041109,404,098 - 109,458,673 (-)NCBI
RefSeq Acc Id: XM_038003426   ⟹   XP_037859354
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666041109,404,386 - 109,458,673 (-)NCBI
RefSeq Acc Id: XM_038003427   ⟹   XP_037859355
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666041109,404,098 - 109,459,149 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_007983764   ⟸   XM_007985573
- Peptide Label: isoform X1
RefSeq Acc Id: XP_037859355   ⟸   XM_038003427
- Peptide Label: isoform X7
RefSeq Acc Id: XP_037859352   ⟸   XM_038003424
- Peptide Label: isoform X4
RefSeq Acc Id: XP_037859350   ⟸   XM_038003422
- Peptide Label: isoform X2
RefSeq Acc Id: XP_037859351   ⟸   XM_038003423
- Peptide Label: isoform X3
RefSeq Acc Id: XP_037859353   ⟸   XM_038003425
- Peptide Label: isoform X5
RefSeq Acc Id: XP_037859354   ⟸   XM_038003426
- Peptide Label: isoform X6


Additional Information

Database Acc Id Source(s)
NCBI Gene CCDC14 ENTREZGENE