AC037471.1 (ADAM metallopeptidase domain 11 (ADAM11) pseudogene) - Rat Genome Database

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Gene: AC037471.1 (ADAM metallopeptidase domain 11 (ADAM11) pseudogene) Homo sapiens
Analyze
Symbol: AC037471.1
Name: ADAM metallopeptidase domain 11 (ADAM11) pseudogene
RGD ID: 16561972
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: disintegrin and metalloproteinase domain-containing protein 21-like; LOC283804
Related Functional Gene: ADAM21  
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381521,053,002 - 21,055,005 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1521,053,004 - 21,054,702 (-)EnsemblGRCh38hg38GRCh38
GRCh371521,258,331 - 21,260,334 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map15q11.2NCBI
CHM1_11521,258,357 - 21,260,360 (-)NCBICHM1_1
T2T-CHM13v2.01519,613,163 - 19,615,166 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:108
Count of miRNA genes:106
Interacting mature miRNAs:107
Transcripts:ENST00000554586
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 4 4 1 4 2 9 1 244 7 2
Below cutoff 120 98 59 26 63 8 374 163 545 25 175 48 19 31 349

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000554586
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1521,053,004 - 21,054,702 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC037471.1 COSMIC
Ensembl Genes ENSG00000259025 Ensembl, ENTREZGENE
GTEx ENSG00000259025 GTEx
Human Proteome Map AC037471.1 Human Proteome Map
NCBI Gene LOC283804 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-06-25 AC037471.1  ADAM metallopeptidase domain 11 (ADAM11) pseudogene  LOC283804  disintegrin and metalloproteinase domain-containing protein 21-like  Symbol and/or name change 19259462 PROVISIONAL
2020-06-18 LOC283804  disintegrin and metalloproteinase domain-containing protein 21-like  AC037471.1  ADAM metallopeptidase domain 11 (ADAM11) pseudogene  Symbol and/or name change 5135510 APPROVED