Gm14744 (predicted gene 14744) - Rat Genome Database

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Gene: Gm14744 (predicted gene 14744) Mus musculus
Analyze
No known orthologs.
Symbol: Gm14744
Name: predicted gene 14744
RGD ID: 1625150
MGI Page MGI
Description: Predicted to enable odorant binding activity. Located in extracellular space.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: hypothetical protein LOC628923; novel protein similar to odorant binding protein I f Obp1f; OBP1; Obp1f; OBP2; odorant binding protein 1; odorant binding protein 2; odorant binding protein I f-like; uncharacterized protein LOC628923
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X76,908,364 - 76,913,639 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX76,908,364 - 76,913,639 (+)EnsemblGRCm39 Ensembl
GRCm38X77,864,758 - 77,870,033 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX77,864,758 - 77,870,033 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X75,110,097 - 75,115,372 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X74,117,477 - 74,122,752 (+)NCBIMGSCv36mm8
MGSCv36X60,879,705 - 60,884,994 (+)NCBIMGSCv36mm8
CeleraX69,196,970 - 69,201,470 (+)NCBICelera
Cytogenetic MapXBNCBI
cM MapX38.32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:12466851   PMID:21267068   PMID:21873635   PMID:27577013  


Genomics

Variants

.
Variants in Gm14744
144 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:81
Count of miRNA genes:75
Interacting mature miRNAs:75
Transcripts:ENSMUST00000114039
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
13208567Bmiq12_mbody mass index QTL 12 (mouse)X3526365377043606Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX3992149886260137Mouse
1300702Fcsa4_mfemoral cross-sectional area 4 (mouse)Not determinedX4602744480027567Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
25314311Syncl3_msynaptonemal complex length 3 (mouse)X5198887789743606Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
10412108Desp5_mdespair 5 (mouse)Not determinedX5472235188722351Mouse
13464140Hdlq108_mHDL QTL 108 (mouse)X5777196091771960Mouse
25314316Mlh1fc3_mMLH1 foci count 3 (mouse)X6134360689843606Mouse
25314318Sccor2_msynaptonemal complex length to mean MLH1 count ratio 2 (mouse)X7054360696543606Mouse
1357730Hstx1_mhybrid sterility, X chromosome 1 (mouse)Not determinedX7145385277600812Mouse
4141665Mhysq2_mmale hybrid sterility QTL 2 (mouse)Not determined71453852139203212Mouse
12879918Shm4_msperm head morphology 4 (mouse)X72072050102062720Mouse
1357500Mdmsc6_mmodifier of muscularity 6 (mouse)Not determinedX75306671109306758Mouse
1302054Gct4_mgranulosa cell tumorigenesis 4 (mouse)Not determinedX76124336102062720Mouse

Markers in Region
px-41e2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X77,869,577 - 77,869,805UniSTSGRCm38
MGSCv37X75,114,916 - 75,115,144UniSTSGRCm37
CeleraX69,201,014 - 69,201,242UniSTS
Cytogenetic MapXA7.3UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000114039   ⟹   ENSMUSP00000109673
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX76,908,364 - 76,913,639 (+)Ensembl
GRCm38.p6 EnsemblX77,864,758 - 77,870,033 (+)Ensembl
RefSeq Acc Id: NM_001085544   ⟹   NP_001079013
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X76,908,364 - 76,913,639 (+)NCBI
GRCm38X77,864,758 - 77,870,033 (+)ENTREZGENE
MGSCv37X75,110,097 - 75,115,372 (+)RGD
CeleraX69,196,970 - 69,201,470 (+)ENTREZGENE
cM MapX ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001079013 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AIA65151 (Get FASTA)   NCBI Sequence Viewer  
  AIA65152 (Get FASTA)   NCBI Sequence Viewer  
  AIA65156 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000109673
  ENSMUSP00000109673.3
Reference Protein Sequences
RefSeq Acc Id: NP_001079013   ⟸   NM_001085544
- Peptide Label: precursor
- UniProtKB: B1AVU4 (UniProtKB/TrEMBL),   A0A0D3M005 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000109673   ⟸   ENSMUST00000114039
Protein Domains
Lipocalin/cytosolic fatty-acid binding

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B1AVU4-F1-model_v2 AlphaFold B1AVU4 1-173 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3709306 AgrOrtholog
Ensembl Genes ENSMUSG00000079522 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000114039 ENTREZGENE
  ENSMUST00000114039.3 UniProtKB/TrEMBL
Gene3D-CATH 2.40.128.20 UniProtKB/TrEMBL
InterPro Calycin UniProtKB/TrEMBL
  Lipocalin UniProtKB/TrEMBL
  Lipocalin_CS UniProtKB/TrEMBL
  Lipocln_cytosolic_FA-bd_dom UniProtKB/TrEMBL
  Odour-bd UniProtKB/TrEMBL
KEGG Report mmu:628923 UniProtKB/TrEMBL
MGD MGI:3709306 ENTREZGENE
NCBI Gene 628923 ENTREZGENE
PANTHER ODORANT-BINDING PROTEIN 1A-RELATED UniProtKB/TrEMBL
  PTHR11430 UniProtKB/TrEMBL
Pfam Lipocalin UniProtKB/TrEMBL
PhenoGen Gm14744 PhenoGen
PRINTS ODORANTBNDNG UniProtKB/TrEMBL
PROSITE LIPOCALIN UniProtKB/TrEMBL
  PROKAR_LIPOPROTEIN UniProtKB/TrEMBL
Superfamily-SCOP Calycin UniProtKB/TrEMBL
UniProt A0A0D3M005 ENTREZGENE
  B1AVU4 ENTREZGENE, UniProtKB/TrEMBL