Mterf1b (mitochondrial transcription termination factor 1b)

Gene: Mterf1b (mitochondrial transcription termination factor 1b) Mus musculus

Analyze

Symbol:

Mterf1b

Name:

mitochondrial transcription termination factor 1b

RGD ID:

1624885

MGI Page

MGI

Description:

Enables sequence-specific DNA binding activity. Acts upstream of or within transcription initiation at mitochondrial promoter. Located in mitochondrion. Orthologous to human MTERF1 (mitochondrial transcription termination factor 1).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

ENSMUSG00000053178; Gm9897; mitochondrial transcription termination factor-like; transcription termination factor 1b, mitochondrial; transcription termination factor, mitochondrial

RGD Orthologs

Human

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MTERF1 (mitochondrial transcription termination factor 1)	HGNC	EggNOG, Ensembl, HomoloGene, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Mterf1 (mitochondrial transcription termination factor 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	MTERF1 (mitochondrial transcription termination factor 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	mTTF	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	mterf1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	4,242,329 - 4,247,652 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	4,242,367 - 4,247,651 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	4,192,328 - 4,197,651 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	4,192,367 - 4,197,651 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	4,192,367 - 4,197,651 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	3,896,592 - 3,899,930 (-)	NCBI		MGSCv36	mm8
Celera	5	4,112,699 - 4,117,950 (+)	NCBI		Celera
Cytogenetic Map	5	A1	NCBI
cM Map	5	2.34	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

pleomorphic xanthoastrocytoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

aflatoxin M1 (ISO)

bisphenol A (EXP)

cannabidiol (ISO)

chlorpyrifos (EXP)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

cypermethrin (EXP)

dicrotophos (ISO)

doxorubicin (ISO)

epoxiconazole (EXP)

folic acid (ISO)

formaldehyde (ISO)

leflunomide (ISO)

methyl methanesulfonate (ISO)

rotenone (ISO)

sodium arsenite (EXP)

titanium dioxide (EXP)

triphenyl phosphate (ISO)

troglitazone (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA geometric change (ISO)

DNA-templated transcription termination (ISO)

regulation of DNA-templated transcription (IEA)

termination of mitochondrial transcription (IBA,ISO)

transcription initiation at mitochondrial promoter (IDA)

Cellular Component

mitochondrial matrix (IBA)

mitochondrial nucleoid (ISO)

mitochondrion (HDA,ISO)

Molecular Function

DNA binding (IEA)

double-stranded DNA binding (ISO)

nucleic acid binding (IBA)

protein binding (ISO)

sequence-specific DNA binding (IDA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal cell physiology (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:15582606	PMID:16141072	PMID:16141073	PMID:18614015	PMID:21267068	PMID:21873635
PMID:23562081	PMID:30457570

Genomics

Comparative Map Data

Mterf1b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	4,242,329 - 4,247,652 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	4,242,367 - 4,247,651 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	4,192,328 - 4,197,651 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	4,192,367 - 4,197,651 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	4,192,367 - 4,197,651 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	3,896,592 - 3,899,930 (-)	NCBI		MGSCv36	mm8
Celera	5	4,112,699 - 4,117,950 (+)	NCBI		Celera
Cytogenetic Map	5	A1	NCBI
cM Map	5	2.34	NCBI

MTERF1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	91,870,929 - 91,880,702 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	91,692,008 - 91,880,702 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	91,500,243 - 91,510,016 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	91,339,957 - 91,347,952 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	91,146,855 - 91,154,667	NCBI
Celera	7	86,206,613 - 86,214,608 (-)	NCBI		Celera
Cytogenetic Map	7	q21.2	NCBI
HuRef	7	86,109,784 - 86,117,779 (-)	NCBI		HuRef
CHM1_1	7	91,432,061 - 91,440,056 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	93,112,226 - 93,122,026 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	90,832,721 - 90,840,716 (-)	NCBI

Variants

Variants in Mterf1b
178 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	51
Count of miRNA genes:	50
Interacting mature miRNAs:	51
Transcripts:	ENSMUST00000177258
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4141234	Pbwg14_m	postnatal body weight growth 14 (mouse)			Not determined		5	1	21273552	Mouse
1301468	Eye1_m	eye weight 1 (mouse)			Not determined		5	1	21929650	Mouse
10412081	Bwq13_m	body weight QTL 13 (mouse)			Not determined		5	1	23606323	Mouse
12904958	Gmmq8_m	gastrocnemius muscle mass QTL 8 (mouse)					5	1	29421124	Mouse
10401122	Pgia41_m	proteoglycan induced arthritis 41 (mouse)			Not determined		5	823144	34823280	Mouse
12738412	Lfibq4_m	liver fibrosis QTL 4 (mouse)					5	3150000	20799180	Mouse
15039371	Nmrs21_m	NAFLD-associated magnetic resonance shift 21 (mouse)					5	3504823	37504823	Mouse

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001042670	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006503569	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC068609	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK016498	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK020320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC028525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC141337	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000177258 ⟹ ENSMUSP00000135408

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	4,242,367 - 4,247,651 (+)	Ensembl
GRCm38.p6 Ensembl	5	4,192,367 - 4,197,651 (+)	Ensembl

RefSeq Acc Id:

NM_001042670 ⟹ NP_001036135

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	4,242,383 - 4,247,652 (+)	NCBI
GRCm38	5	4,192,367 - 4,197,651 (+)	ENTREZGENE
MGSCv37	5	4,192,367 - 4,197,651 (+)	RGD
Celera	5	4,112,699 - 4,117,950 (+)	RGD
cM Map	5		ENTREZGENE

Sequence:

show sequence

TCCCTCCCGGGCGTCCAGAGGCGGAAGTGAAAGGTGTCTACCGGGAGCGTTGCATTTGAAAAAC
TTTGGGCTACCTGATGATTATGGCATCAAGAAACATCTGGTGTGTGAGAAGAAACTTTCTCTTT
GATTTAAGAGGCTGGATGCTTCAGTATTCAGCAGAAGTTTTCCTCAAGTCGATTTCATTCAGGA
CGTTTAGTGTGGAATGCGACAGTAAGGACAAGGAGTCTTTGGAGGAGGAGAGGGAGGACCTGCT
GAGCAACTTAGTCACCATGGGCGTTGATATCGACATGGCAAGGAGGCGACAGCCTGGAGTTTTT
AACAAGGCTGTTACGAATGAGCAGGAGCTGAAGATATTCCTTCTGTCCAAGGGAGCTAGTGACA
AAGTGATTGGTAGCATCATATCAAGATATCCACGAGCTATAACACGCACTCCTGAAAGTCTTTC
AAAACGGTGGGATCTGTGGAGAAAGATTATGGCATCAGACCTTGAAATTGTAAATATTTTGGAG
CGTTCTCCTGAATCCTTTTTTCGATCTAATAACAATCTAAACTTAGAGAATAATATAAAGTTCC
TTTGCTCTGTTGGATTGACTCATAAATGCCTCTGCAGACTGTTGACCAATGCTCCCAGAACCTT
CTCCAACAGTCTGAATTTGAATAAGCAAATGGTTGAATTTTTGCAGGAGACTGGTATGTCCTTA
GGTCACAATGATCCCAGAGATTTTGTCAGGAAGATAATTTCTAAAAACCCTTCCATCTTAATTC
AGAGCACCAAGCGTGTAAAAACTAACATTGAATTTTTACAATCAACTTTCAACTTGAACAAACA
GGACCTGCTGCTTCTGATATGTGGCCCAGGAGCTAGAATCTTAGACCTTTCCAATGACTGTACC
AAAAAAAATTACACAAACATAAGAGAGAGGCTGCTTTCTCTTGGGTGCAGTGAGGAGGAGGTAC
AGAGGTTTGTCCTAAGCTATCTGAATATGGTCTTCTTGTCAGAAAAAAAGTTTAATGATAAAAT
AGACTGCCTTATAGAAGAAAAAATCAGTGCTTCACAAATAATTGAAAATCCGAGGATTTTAGAC
TCCAGCATAAATACTTTAAAAACTCGCATCCGAGAGCTGTCCCATGCTGGGTATGACTTGAGCA
CATCCAGCATTGCTCTGCTGTCCTGGAGTCAGAGAAGATATGAAGCTAAACTGAAGAGATTATG
TGGATAGGACAGTGTAGGAGGAGTCGCAGGCAATTGGACAGGTGTGGCACTGGTTCCAGTATGG
ACTTTTCAAACAGGAGAGTTTTGTTTTTGTTTTTTAATTATTTTTTTATTAAATTTTTTTAAAT
AAAAATTTTAAAGTATTTAAGATT

hide sequence

RefSeq Acc Id:

XM_006503569 ⟹ XP_006503632

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	4,242,329 - 4,247,650 (+)	NCBI
GRCm38	5	4,192,328 - 4,197,648 (+)	NCBI

Sequence:

show sequence

GCCGAGGCCGGAAGTCAGCCGTTACTTCCGCACTCCGCTCCCTCCCGGGCGTCCAGAGGCGGAA
GTGAAAGGTGTCTACCGGGAGCGTTGGTAGGAGCGCGGATGCAGTGTGCGGGCTGGGGCTGGGG
AGCTGCTGGAGCCTTTGCGAGCGGCTTGCGAGTCTCTGCTAGACAGGGCGATGAATGGCTAAAG
GCCATTGCAGAACTGCCCGAGGGAAGGCGAGCCTTCGATGTGGGATTACGGCGGTTCTGAGTTT
AGACTCATCAAGCCCTCCACACTTCGTACAGCAAAGAGCTCGGCATTGGCTCGGAATTTGTAAC
TTTAGGGACAGTGCCCACCCTTAGGTTGTTGTATATATAGGGCATTACGAAATAATGTATGTGT
AACGTGGGGTTCTGGTATTAAAGTGCGTTTGCGATTCCGCTACCTTCCCCCCATGCGTTGCCGT
TTTCTTTTTATTATGACTGAGAAATGTTTAGTTTGCGAGAGGTCGTGCATCTCACAAAAATGAT
TTGACCTGGACTTCTTTATTCTCTACTACACTGGCGATATTTTTGCCTTTTTCTTTTCCAAATT
AGTGGTGTGGTGGTAGAAACATCGGTTTTTACCTTTTCTGGAGAGATCTAAAGTCTCTTATGAC
AAAGTCGACATCGATATGTAGTTCTGTTCAAAACAAAACAAAACAACCCTGTACACTTAAATGC
TGTGTCAAAAGAGTAGCGGGATTGTGGAATTCCCAAAGATTAGCAGTTTTCTTTAAACACCTGT
TAGCTTTCCAGCTGTGGGATGGGGTGGGGTGGAGGGGACGGGAAGGGACAGGGACATAAATCTT
CCATCTTGAACCTCGGTAGTTACAGTCACCAAGATGTTGGTGATATTCATGAAATTTAACGAAG
CTTAAGAAAATGGTTTATTTTAGAGGAAGATTGAAGGCAATTATTCGATATTTGCTTTTTTTAA
AATTTGTCTTGGGATAGTTAATTTGCCAGAGGTTACAAATTCAGCTCAACAATCTGTTTTTAAA
AGGACATTGTGTTTATACAATGACTTGCAAATACAACTTGGGTTCATGAAAATGACCCTTTTTC
TTTTCTGAAAGAAAAGACAATTTAACTCAGAAAAGTGCACGTGCTTTCCCGCCTGCGAGTGCGC
TCATATGTGAGCTTTGAGTTTGATAAGATAGTAGTAGTAAGTGCTGAGGGGAGAGAGCATCTAC
TGAGAAGGTGATGGGAATATGAGAATTATGAGGAAAAACAATAGGACATGCTTCTAATGGAGAA
TACACACACACACACTCATGTGTGTGACATGAAAGTAAAAGAGGGACTTTGGGAAGATAGATAC
AGATTCCATTATTTGTTATGTCAGTTAAAAATAATGAAAAGACAGCAAGGACACTGAGACTAAA
ATAGGCAGGAACAAGATTGCTTTGTTGCTGTTTTGAGTGAAGTTGATTTGGTAAGGAAGAGAGA
GAATGTAAAACCCTCCTGGGGGTGCTTACCACAATGACATTAATCAGAGGAGCGCTACTTTGGG
TGCTGCATGGATGCTCAGTTCAACTTTATATGTTGATACATTTAGAAAATATTTATTTGGAGGA
TAAGTTATATAAAGAGAAACAAAAATCTACTTGTGACAAGTCTAACAAACTAATAGTTTTTTTT
ACCCTTTTCTTAGGAGTCTTAGCAAACCTTTTTCTTATTTTATTGGTATTAGAATTTCTGTTGA
ATATTCTGTGTCATGTTTATCGTTTACCGTGGTGCTAATCATCTGAAAGGAATGAGCTGTCTGG
TAGTAATCTTCAAGCTGATAGACTTAGTATATGTATCCTTAGTGACTGATTTTTAAAAATTTAT
TATTCATATTGTATTTGTTATAAAATGTATGTAAAATAGAAATTGTCACAGGATAAGACAAGTA
TAATTGAAAATTGATACTGTCTATTGGATAATTTTGCATGCTTATTTATAACGCTTCTTATAAA
ACTTGGCTGACTGTAATGTGATAGTCTTCTGTCCAGTTATCCAGCAGAGGTCATCCATGAGCAT
CTGGAAGGGAAAAGGTTGGATTGTACATGCTAGATAGAGCTTGCTTTCTTCTTTCTTTCCTTCT
TTCTTTTCTTTTCCTTCTTTCTTTTCTTTTCTTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTT
CTTTCTTTCTTTCTTTCTTTCTTTTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTT
CTTTCTTTCTTCTTCTTCTTTTCTTTCTTTCTTTTCTTTTCTTTTTCTTTTTATATGTATATTT
TATTAATTAATTGAGAATTTAATACAGTGTATTTTGATCACATTCACTCCACTCCTCCAGCTCC
TCCTAAATTCACATCCCATTCCATAACCATTGAAGTTTTTGTTCTTGCTCTTTTTTTTTCCCAT
TTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACC
CACCCCCAATCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCA
TATAAAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGAT
ACATATGCAGCTAGAGTCAAGAGCTCTTTTTTTTAAAGCCATTAAATTCAGTTAGTATTGTCTG
TATTCATTTGGTTATATGGCCATCATCAGAATGTTGGATCTACTGGGGCCCACACCCTTGACTG
GAAAAAAAAAATTAAAGGAGGACATGGCTGTTCCTGGATTTGTTGTAACAGAAGGGTGATTGTA
TATATGAGGGAGAAAACAGCCAGAGGCATCTAGAAGGATCTAGAGTGGATATGAGTGGCAGACT
GAGCTGGGTCATGTGAGGAGGGAGGAGAGGACAGGAAGAGAGGGCAACCTTGAGCAGCAGCCAA
GAGACAAAAAGGCCAAAAAGGAACAAAAGGCCTGGCGTTGCTGAAATGGCTGGAGGGGGATGGG
CAGCCCAGCCTCTGACTGGAGAGTTCAGGGTAGAGGTGGGATATGCCAGCCAGGAGGACCTTGT
AACAGATAAGGACTGAGGGATGATGGGAGAACCTGGCAGCCAGGTCAACTTTGATATGTTTAAT
GAATACTTCAGCTAGTGTTCTTGGCAAACTCTTGTCCCAGGTTTAAGACCTAACAACTTTGAAT
TAGAAAATTAATTGCTCTCTCCTCCTTTCTGGTATTGGGGAATTGAACTCAAATCTTCATGCAT
GCTAAGGATATATAATGTATCACTGACCTACCTCTGAATTACAGTCCATCCCTCAACTATATCA
ATATGAAGATGGAAATGAGTTTAGAATTATGGCATTGCAACCAAGAAAACAGTTTGGAAAACTG
AGATAGAGATTAATGTTGGCATCTTTTGTCTACAGATGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTATGATCCATTTAAAGGGTATCATATGTCTAAAAAAGACATTAAAGATGCAA
ATTAGATAATCTGAAGTGTGTTTTTTTTAGAGCTTCATTTAGAGTTTGAGGTAGCCAGAAGCAA
AGAGATCTAGTGTCTGTGGCAGGTTCAGTTCAGACATCTGGCAAGTTGAAAGTTGAATTGTAAT
TAAAGGGCAATTTCTTAGGAACAAGCCAAAGATGTCAGAAACCACAGAAAAGAGAAGAGGTGGA
GAGGAGTAAATGATTCTGGAGAGTCAAAGCAGGCACAGTGAACTAAAAGAACAATACAAGGGCA
GGGCAGCTTGGGGCAGCATGGTGTTCTGCTTCTCTGTAAGTCAAAGAGGAAGAGCCTTGAGTCC
ATAGGGACCCAACAGAAGCCATGAGGCAGGAGCATTTGAAAAACTTTGGGCTACCTGATGATTA
TGGCATCAAGAAACATCTGGTGTGTGAGAAGAAACTTTCTCTTTGATTTAAGAGGCTGGATGCT
TCAGTATTCAGCAGAAGTTTTCCTCAAGTCGATTTCATTCAGGACGTTTAGTGTGGAATGCGAC
AGTAAGGACAAGGAGTCTTTGGAGGAGGAGAGGGAGGACCTGCTGAGCAACTTAGTCACCATGG
GCGTTGATATCGACATGGCAAGGAGGCGACAGCCTGGAGTTTTTAACAAGGCTGTTACGAATGA
GCAGGAGCTGAAGATATTCCTTCTGTCCAAGGGAGCTAGTGACAAAGTGATTGGTAGCATCATA
TCAAGATATCCACGAGCTATAACACGCACTCCTGAAAGTCTTTCAAAACGGTGGGATCTGTGGA
GAAAGATTATGGCATCAGACCTTGAAATTGTAAATATTTTGGAGCGTTCTCCTGAATCCTTTTT
TCGATCTAATAACAATCTAAACTTAGAGAATAATATAAAGTTCCTTTGCTCTGTTGGATTGACT
CATAAATGCCTCTGCAGACTGTTGACCAATGCTCCCAGAACCTTCTCCAACAGTCTGAATTTGA
ATAAGCAAATGGTTGAATTTTTGCAGGAGACTGGTATGTCCTTAGGTCACAATGATCCCAGAGA
TTTTGTCAGGAAGATAATTTCTAAAAACCCTTCCATCTTAATTCAGAGCACCAAGCGTGTAAAA
ACTAACATTGAATTTTTACAATCAACTTTCAACTTGAACAAACAGGACCTGCTGCTTCTGATAT
GTGGCCCAGGAGCTAGAATCTTAGACCTTTCCAATGACTGTACCAAAAAAAATTACACAAACAT
AAGAGAGAGGCTGCTTTCTCTTGGGTGCAGTGAGGAGGAGGTACAGAGGTTTGTCCTAAGCTAT
CTGAATATGGTCTTCTTGTCAGAAAAAAAGTTTAATGATAAAATAGACTGCCTTATAGAAGAAA
AAATCAGTGCTTCACAAATAATTGAAAATCCGAGGATTTTAGACTCCAGCATAAATACTTTAAA
AACTCGCATCCGAGAGCTGTCCCATGCTGGGTATGACTTGAGCACATCCAGCATTGCTCTGCTG
TCCTGGAGTCAGAGAAGATATGAAGCTAAACTGAAGAGATTATGTGGATAGGACAGTGTAGGAG
GAGTCGCAGGCAATTGGACAGGTGTGGCACTGGTTCCAGTATGGACTTTTCAAACAGGAGAGTT
TTGTTTTTGTTTTTTAATTATTTTTTTATTAAATTTTTTTAAATAAAAATTTTAAAGTATTTAA
GAT

hide sequence

Protein Sequences


Protein RefSeqs	NP_001036135	(Get FASTA)	NCBI Sequence Viewer
	XP_006503632	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH28525	(Get FASTA)	NCBI Sequence Viewer
	AAI41338	(Get FASTA)	NCBI Sequence Viewer
	B9EJ57	(Get FASTA)	NCBI Sequence Viewer
	EDL14630	(Get FASTA)	NCBI Sequence Viewer
	EDL14631	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000135408
	ENSMUSP00000135408.2

RefSeq Acc Id:

NP_001036135 ⟸ NM_001042670

- UniProtKB:

L7N482 (UniProtKB/Swiss-Prot), B9EJ57 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MIMASRNIWCVRRNFLFDLRGWMLQYSAEVFLKSISFRTFSVECDSKDKESLEEEREDLLSNLV
TMGVDIDMARRRQPGVFNKAVTNEQELKIFLLSKGASDKVIGSIISRYPRAITRTPESLSKRWD
LWRKIMASDLEIVNILERSPESFFRSNNNLNLENNIKFLCSVGLTHKCLCRLLTNAPRTFSNSL
NLNKQMVEFLQETGMSLGHNDPRDFVRKIISKNPSILIQSTKRVKTNIEFLQSTFNLNKQDLLL
LICGPGARILDLSNDCTKKNYTNIRERLLSLGCSEEEVQRFVLSYLNMVFLSEKKFNDKIDCLI
EEKISASQIIENPRILDSSINTLKTRIRELSHAGYDLSTSSIALLSWSQRRYEAKLKRLCG

hide sequence

RefSeq Acc Id:	XP_006503632 ⟸ XM_006503569
- Peptide Label:	isoform X1
- UniProtKB:	A0A096P6K7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIMASRNIWCVRRNFLFDLRGWMLQYSAEVFLKSISFRTFSVECDSKDKESLEEEREDLLSNLV TMGVDIDMARRRQPGVFNKAVTNEQELKIFLLSKGASDKVIGSIISRYPRAITRTPESLSKRWD LWRKIMASDLEIVNILERSPESFFRSNNNLNLENNIKFLCSVGLTHKCLCRLLTNAPRTFSNSL NLNKQMVEFLQETGMSLGHNDPRDFVRKIISKNPSILIQSTKRVKTNIEFLQSTFNLNKQDLLL LICGPGARILDLSNDCTKKNYTNIRERLLSLGCSEEEVQRFVLSYLNMVFLSEKKFNDKIDCLI EEKISASQIIENPRILDSSINTLKTRIRELSHAGYDLSTSSIALLSWSQRRYEAKLKRLCG hide sequence

RefSeq Acc Id:

ENSMUSP00000135408 ⟸ ENSMUST00000177258

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B9EJ57-F1-model_v2	AlphaFold	B9EJ57	1-379	view protein structure

Promoters

RGD ID:

6885922

Promoter ID:

EPDNEW_M6411

Type:

initiation region

Name:

Mterf1b_1

Description:

Mus musculus mitochondrial transcription termination factor 1b, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	5	4,192,360 - 4,192,420	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:3704243	AgrOrtholog
Ensembl Genes	ENSMUSG00000053178	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000177258	ENTREZGENE
	ENSMUST00000177258.2	UniProtKB/TrEMBL
Gene3D-CATH	1.25.70.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	MTERF	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	MTERF_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:208595	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD	MGI:3704243	ENTREZGENE
NCBI Gene	208595	ENTREZGENE
PANTHER	PTHR15437	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TRANSCRIPTION TERMINATION FACTOR 1, MITOCHONDRIAL	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	mTERF	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Mterf1b	PhenoGen
SMART	Mterf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A096P6K7	ENTREZGENE, UniProtKB/TrEMBL
	B9EJ57	ENTREZGENE
	L7N482	ENTREZGENE
	MTF1B_MOUSE	UniProtKB/Swiss-Prot
	Q05C75_MOUSE	UniProtKB/TrEMBL
UniProt Secondary	L7N482	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-11-05	Mterf1b	mitochondrial transcription termination factor 1b	Gm9897	predicted gene 9897	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Mammalian Phenotype