Etnppl (ethanolamine phosphate phospholyase) - Rat Genome Database

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Gene: Etnppl (ethanolamine phosphate phospholyase) Mus musculus
Analyze
Symbol: Etnppl
Name: ethanolamine phosphate phospholyase
RGD ID: 1622275
MGI Page MGI
Description: Predicted to enable ethanolamine-phosphate phospho-lyase activity. Predicted to be located in mitochondrion. Orthologous to human ETNPPL (ethanolamine-phosphate phospho-lyase).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1300019H02Rik; Agxt2; Agxt2l1; AI195447; alanine--glyoxylate aminotransferase 2-like 1; alanine-glyoxylate aminotransferase 2-like 1; ethanolamine-phosphate phospho-lyase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393130,411,097 - 130,429,399 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3130,411,097 - 130,431,170 (+)EnsemblGRCm39 Ensembl
GRCm383130,617,448 - 130,635,750 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3130,617,448 - 130,637,521 (+)EnsemblGRCm38mm10GRCm38
MGSCv373130,320,366 - 130,338,668 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363130,606,730 - 130,624,903 (+)NCBIMGSCv36mm8
Celera3137,132,851 - 137,151,194 (+)NCBICelera
Cytogenetic Map3G3NCBI
cM Map360.47NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14681479   PMID:16141072   PMID:16141073   PMID:21267068   PMID:21677750  
PMID:21873635   PMID:34048714   PMID:36794261  


Genomics

Comparative Map Data
Etnppl
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393130,411,097 - 130,429,399 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3130,411,097 - 130,431,170 (+)EnsemblGRCm39 Ensembl
GRCm383130,617,448 - 130,635,750 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3130,617,448 - 130,637,521 (+)EnsemblGRCm38mm10GRCm38
MGSCv373130,320,366 - 130,338,668 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363130,606,730 - 130,624,903 (+)NCBIMGSCv36mm8
Celera3137,132,851 - 137,151,194 (+)NCBICelera
Cytogenetic Map3G3NCBI
cM Map360.47NCBI
ETNPPL
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384108,742,053 - 108,763,053 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4108,742,048 - 108,763,054 (-)EnsemblGRCh38hg38GRCh38
GRCh374109,663,209 - 109,684,209 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364109,882,645 - 109,903,658 (-)NCBINCBI36Build 36hg18NCBI36
Build 344110,020,807 - 110,041,813NCBI
Celera4106,958,027 - 106,978,961 (-)NCBICelera
Cytogenetic Map4q25NCBI
HuRef4105,395,013 - 105,416,012 (-)NCBIHuRef
CHM1_14109,639,905 - 109,660,851 (-)NCBICHM1_1
T2T-CHM13v2.04112,045,047 - 112,066,004 (-)NCBIT2T-CHM13v2.0
Etnppl
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82221,847,210 - 221,868,827 (+)NCBIGRCr8
mRatBN7.22219,173,048 - 219,194,646 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2219,172,978 - 219,192,212 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.02235,738,377 - 235,760,351 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2235,738,416 - 235,760,352 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02254,289,706 - 254,309,474 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera2211,440,271 - 211,459,741 (+)NCBICelera
Cytogenetic Map2q43NCBI
Etnppl
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554961,275,051 - 1,292,349 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554961,274,929 - 1,292,802 (+)NCBIChiLan1.0ChiLan1.0
ETNPPL
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23106,838,230 - 106,859,275 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14107,133,189 - 107,154,245 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04101,244,460 - 101,265,672 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14111,815,214 - 111,836,412 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4111,815,226 - 111,836,412 (-)Ensemblpanpan1.1panPan2
ETNPPL
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13229,073,846 - 29,093,077 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3228,963,168 - 29,093,101 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3212,927,060 - 12,947,164 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03229,302,397 - 29,322,276 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3229,302,405 - 29,321,527 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13229,296,692 - 29,316,808 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03229,041,213 - 29,060,278 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03210,794,955 - 10,814,884 (+)NCBIUU_Cfam_GSD_1.0
Etnppl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530111,876,410 - 11,894,779 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493656356,776 - 74,403 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493656356,216 - 74,591 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ETNPPL
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8113,363,042 - 113,384,774 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.18113,363,047 - 113,384,783 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28121,603,071 - 121,622,426 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ETNPPL
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1756,670,688 - 56,692,069 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl756,669,718 - 56,691,026 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603735,296,344 - 35,316,825 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Etnppl
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624830924,185 - 938,388 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624830923,034 - 938,773 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Etnppl
680 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:509
Count of miRNA genes:334
Interacting mature miRNAs:381
Transcripts:ENSMUST00000072271, ENSMUST00000163620, ENSMUST00000166187, ENSMUST00000170664, ENSMUST00000172432
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33265060142405761Mouse
1302056Orgwq4_morgan weight QTL 4 (mouse)Not determined330067588147304689Mouse
1301705Sles3_msystemic lupus erythmatosus suppressor 3 (mouse)Not determined337174862143353183Mouse
26884382Bzwq1_mbi-zygomatic width QTL 1, 5 week (mouse)352207421137205761Mouse
4142178Ctrq2_mC. trachomatis resistance QTL 2 (mouse)Not determined389139967137453008Mouse
27226732Tibmd3_mtibia midshaft diameter 3, 10 week (mouse)396607316147805636Mouse
10043955Wt10q4_mbody weight, 10 weeks, QTL 4 (mouse)Not determined398624041132624197Mouse
11533920Mvb3_mmodifier of vibrator 3 (mouse)398635284132635383Mouse
12792984Modn1_mmodifier of Dstn neovascularization 1 (mouse)398635284132635383Mouse
1302114Tbs1_mtuberculosis severity 1 (mouse)Not determined398924105132924250Mouse
1300752Ap6q_malcohol preference 6 QTL (mouse)Not determined3100372912147045722Mouse
26884419Bzwq6_mbi-zygomatic width QTL 6, 10 week (mouse)3100607316137205761Mouse
27226733Tibmd6_mtibia midshaft diameter 6, 16 week (mouse)3101307316149805637Mouse
1301805Mors2_mmodifier of obesity related sterility 2 (mouse)Not determined3103482659137482783Mouse
1302093Orgwq5_morgan weight QTL 5 (mouse)Not determined3107376936147304689Mouse
1300619Cdcs1_mcytokine deficiency colitis susceptibility 1 (mouse)Not determined3109834882143835005Mouse
12910793Pwbwq7_mpost-weaning body weight QTL 7 (mouse)3110084357135715812Mouse
12910796Pwbwq6_mpost-weaning body weight QTL 6 (mouse)3110084357135715812Mouse
12910815Ogrq1_moverall growth rate QTL 1 (mouse)3110084357135715812Mouse
1301381Bomb1_mbone marrow pre-B 1 (mouse)Not determined3111133243145133417Mouse
1301100Bdt2_mbone density traits 2 (mouse)Not determined3114736617148736784Mouse
10043919Afpq8_mabdominal fat percent QTL 8 (mouse)Not determined3119057332153057456Mouse
1558868Ses9_msalmonella enteritidis susceptibility 9 (mouse)Not determined3119057332153057456Mouse
4141935Tgq15_mtriglyceride QTL 15 (mouse)Not determined119318586153318586Mouse
4142449Tgq14_mtriglyceride QTL 14 (mouse)Not determined119318586153318586Mouse
1302151Lprm2_mlymphoproliferation modifier 2 (mouse)Not determined3119778857153779044Mouse
10412240Alpq6_malcohol preference QTL 6 (mouse)Not determined3120772078154772078Mouse
26884415Bzwq11_mbi-zygomatic width QTL 11, 16 week (mouse)3124993649137205761Mouse
4142245Pstc1_mperiosteal circumference 1 (mouse)Not determined3126270248159745316Mouse
1301218Letohc1_mlow ethanol consumption 1 (mouse)Not determined3126352986159745316Mouse
1301347Fpli_mfasting plasma insulin (mouse)Not determined3126460514159745316Mouse

Markers in Region
AI195447  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383130,635,240 - 130,635,464UniSTSGRCm38
MGSCv373130,338,158 - 130,338,382UniSTSGRCm37
Celera3137,150,684 - 137,150,908UniSTS
Cytogenetic Map3G3UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000072271   ⟹   ENSMUSP00000072121
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3130,411,218 - 130,431,170 (+)Ensembl
GRCm38.p6 Ensembl3130,617,569 - 130,637,521 (+)Ensembl
RefSeq Acc Id: ENSMUST00000163620   ⟹   ENSMUSP00000129120
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3130,411,342 - 130,428,326 (+)Ensembl
GRCm38.p6 Ensembl3130,617,693 - 130,634,677 (+)Ensembl
RefSeq Acc Id: ENSMUST00000166187   ⟹   ENSMUSP00000131294
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3130,411,097 - 130,428,458 (+)Ensembl
GRCm38.p6 Ensembl3130,617,448 - 130,634,809 (+)Ensembl
RefSeq Acc Id: ENSMUST00000170664   ⟹   ENSMUSP00000128425
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3130,420,169 - 130,423,373 (+)Ensembl
GRCm38.p6 Ensembl3130,626,520 - 130,629,724 (+)Ensembl
RefSeq Acc Id: ENSMUST00000172432
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3130,411,248 - 130,415,299 (+)Ensembl
GRCm38.p6 Ensembl3130,617,599 - 130,621,650 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199940
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3130,411,221 - 130,415,277 (+)Ensembl
GRCm38.p6 Ensembl3130,617,572 - 130,621,628 (+)Ensembl
RefSeq Acc Id: NM_001163587   ⟹   NP_001157059
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393130,411,097 - 130,429,399 (+)NCBI
GRCm383130,617,448 - 130,635,750 (+)ENTREZGENE
MGSCv373130,320,366 - 130,338,668 (+)RGD
Celera3137,132,851 - 137,151,194 (+)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_027907   ⟹   NP_082183
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393130,411,224 - 130,429,399 (+)NCBI
GRCm383130,617,575 - 130,635,750 (+)NCBI
MGSCv373130,320,366 - 130,338,668 (+)RGD
Celera3137,132,851 - 137,151,194 (+)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_082183   ⟸   NM_027907
- UniProtKB: Q811K4 (UniProtKB/Swiss-Prot),   Q9DBB3 (UniProtKB/Swiss-Prot),   Q8BWU8 (UniProtKB/Swiss-Prot),   E9PYH3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157059   ⟸   NM_001163587
- UniProtKB: Q811K4 (UniProtKB/Swiss-Prot),   Q9DBB3 (UniProtKB/Swiss-Prot),   Q8BWU8 (UniProtKB/Swiss-Prot),   E9PYH3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000129120   ⟸   ENSMUST00000163620
RefSeq Acc Id: ENSMUSP00000131294   ⟸   ENSMUST00000166187
RefSeq Acc Id: ENSMUSP00000128425   ⟸   ENSMUST00000170664
RefSeq Acc Id: ENSMUSP00000072121   ⟸   ENSMUST00000072271

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BWU8-F1-model_v2 AlphaFold Q8BWU8 1-499 view protein structure

Promoters
RGD ID:6833362
Promoter ID:MM_KWN:36100
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:NM_001163587,   NM_027907,   UC008RJA.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv363130,320,306 - 130,320,806 (+)MPROMDB
RGD ID:6882372
Promoter ID:EPDNEW_M4637
Type:single initiation site
Name:Etnppl_1
Description:Mus musculus ethanolamine phosphate phospholyase , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm383130,617,573 - 130,617,633EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1919010 AgrOrtholog
Ensembl Genes ENSMUSG00000019232 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000072271 ENTREZGENE
  ENSMUST00000072271.13 UniProtKB/Swiss-Prot
  ENSMUST00000163620.8 UniProtKB/TrEMBL
  ENSMUST00000166187 ENTREZGENE
  ENSMUST00000166187.8 UniProtKB/Swiss-Prot
  ENSMUST00000170664.2 UniProtKB/TrEMBL
Gene3D-CATH 3.40.640.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.90.1150.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Aminotrans_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Aminotrans_3_PPA_site UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase_dom1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase_major UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:71760 UniProtKB/Swiss-Prot
MGD MGI:1919010 ENTREZGENE
NCBI Gene 71760 ENTREZGENE
PANTHER ETHANOLAMINE-PHOSPHATE PHOSPHO-LYASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR45688 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Aminotran_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Etnppl PhenoGen
PIRSF Transaminase_4ab_Lys_Orn UniProtKB/Swiss-Prot
PROSITE AA_TRANSFER_CLASS_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF53383 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt AT2L1_MOUSE UniProtKB/Swiss-Prot
  E9PYH3 ENTREZGENE, UniProtKB/TrEMBL
  F7AY26_MOUSE UniProtKB/TrEMBL
  Q811K4 ENTREZGENE
  Q8BWU8 ENTREZGENE
  Q9DBB3 ENTREZGENE
UniProt Secondary Q811K4 UniProtKB/Swiss-Prot
  Q9DBB3 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-07-02 Etnppl  ethanolamine phosphate phospholyase  Agxt2l1  alanine-glyoxylate aminotransferase 2-like 1  Symbol and/or name change 5135510 APPROVED