Rmdn2 (regulator of microtubule dynamics 2) - Rat Genome Database

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Gene: Rmdn2 (regulator of microtubule dynamics 2) Mus musculus
Analyze
Symbol: Rmdn2
Name: regulator of microtubule dynamics 2
RGD ID: 1621956
MGI Page MGI
Description: Predicted to enable microtubule binding activity. Located in mitochondrion. Is expressed in adrenal gland; anal canal; glans of male genital tubercle; hindgut; and testis. Orthologous to human RMDN2 (regulator of microtubule dynamics 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4921513D11Rik; AW061290; Fam82; Fam82a1; family with sequence similarity 82, member A1; MGC37733; microtubule-associated protein; mRMD-2; regulator of microtubule dynamics protein 2; RIKEN cDNA 4921513D11 gene; RMD-2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391779,886,025 - 80,000,630 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1779,919,292 - 80,000,621 (+)EnsemblGRCm39 Ensembl
GRCm381779,578,596 - 79,684,976 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1779,611,863 - 79,693,192 (+)EnsemblGRCm38mm10GRCm38
MGSCv371780,014,240 - 80,081,492 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361779,523,226 - 79,590,478 (+)NCBIMGSCv36mm8
Celera1783,926,320 - 83,993,610 (+)NCBICelera
Cytogenetic Map17E3NCBI
cM Map1750.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
acetamide  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
aflatoxin M1  (ISO)
all-trans-retinoic acid  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (EXP,ISO)
cadmium dichloride  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chlordecone  (EXP)
chlorpyrifos  (EXP)
chromium(6+)  (EXP)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dioxygen  (EXP)
disodium selenite  (ISO)
Enterolactone  (ISO)
finasteride  (ISO)
flutamide  (ISO)
FR900359  (ISO)
fulvestrant  (ISO)
furan  (ISO)
glafenine  (ISO)
hydrogen peroxide  (ISO)
indometacin  (ISO)
lead(0)  (ISO)
levofloxacin  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodimethylamine  (ISO)
nefazodone  (ISO)
nickel dichloride  (ISO)
nimesulide  (ISO)
orphenadrine  (ISO)
paracetamol  (ISO)
paraquat  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
pirinixic acid  (EXP)
rotenone  (ISO)
silicon dioxide  (ISO)
sodium dichromate  (ISO)
tetrachloromethane  (EXP,ISO)
titanium dioxide  (ISO)
trichloroethene  (ISO)
triphenyl phosphate  (ISO)
trovafloxacin  (ISO)
valdecoxib  (ISO)
valproic acid  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12040188   PMID:12466851   PMID:12477932   PMID:14610273   PMID:16141072   PMID:16141073   PMID:18070910  
PMID:18614015   PMID:21267068   PMID:21873635   PMID:23375831  


Genomics

Comparative Map Data
Rmdn2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391779,886,025 - 80,000,630 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1779,919,292 - 80,000,621 (+)EnsemblGRCm39 Ensembl
GRCm381779,578,596 - 79,684,976 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1779,611,863 - 79,693,192 (+)EnsemblGRCm38mm10GRCm38
MGSCv371780,014,240 - 80,081,492 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361779,523,226 - 79,590,478 (+)NCBIMGSCv36mm8
Celera1783,926,320 - 83,993,610 (+)NCBICelera
Cytogenetic Map17E3NCBI
cM Map1750.3NCBI
RMDN2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38237,920,901 - 38,067,138 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl237,923,187 - 38,067,142 (+)EnsemblGRCh38hg38GRCh38
GRCh37238,152,430 - 38,294,281 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36238,031,110 - 38,147,784 (+)NCBINCBI36Build 36hg18NCBI36
Celera237,993,344 - 38,135,162 (+)NCBICelera
Cytogenetic Map2p22.2NCBI
HuRef237,892,352 - 38,034,219 (+)NCBIHuRef
CHM1_1238,081,826 - 38,223,645 (+)NCBICHM1_1
T2T-CHM13v2.0237,924,033 - 38,074,024 (+)NCBIT2T-CHM13v2.0
Rmdn2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8621,101,383 - 21,195,221 (-)NCBIGRCr8
mRatBN7.2615,372,569 - 15,443,000 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl615,375,496 - 15,441,480 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx615,677,381 - 15,739,885 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0615,999,568 - 16,062,072 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0615,495,833 - 15,558,337 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.062,215,062 - 2,292,288 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl62,216,623 - 2,280,777 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.062,199,087 - 2,268,193 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.462,440,492 - 2,514,419 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera615,046,727 - 15,107,613 (-)NCBICelera
Cytogenetic Map6q12NCBI
Rmdn2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554415,716,934 - 5,774,668 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554415,710,487 - 5,776,351 (+)NCBIChiLan1.0ChiLan1.0
RMDN2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21288,469,045 - 88,558,921 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A88,472,817 - 88,562,878 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A37,948,081 - 38,087,498 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A38,711,957 - 38,801,058 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A38,716,147 - 38,800,755 (+)Ensemblpanpan1.1panPan2
RMDN2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11730,173,479 - 30,240,478 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1730,179,071 - 30,269,373 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1729,986,856 - 30,053,792 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01730,823,188 - 30,890,203 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1730,828,447 - 30,918,797 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11730,049,548 - 30,115,512 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01730,116,501 - 30,183,633 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01730,331,758 - 30,398,722 (+)NCBIUU_Cfam_GSD_1.0
Rmdn2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629241,721,111 - 41,805,599 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936663385,288 - 471,284 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936663387,358 - 471,199 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RMDN2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3102,215,140 - 102,424,775 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13102,210,367 - 102,307,355 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23108,468,326 - 108,559,987 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103220469
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11469,374,850 - 69,461,107 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1469,374,674 - 69,461,703 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604542,497,485 - 42,588,574 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rmdn2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473819,533,915 - 19,624,796 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rmdn2
4665 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:96
Count of miRNA genes:86
Interacting mature miRNAs:92
Transcripts:ENSMUST00000040368
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
26884428Cvht3_mcranial vault height 3, 5 week (mouse)174651092682407429Mouse
1357754Ahl3_mage related hearing loss 3 (mouse)Not determined175020395784204103Mouse
4141879Chlq9_mcirculating hormone level QTL 9 (mouse)Not determined175175842585758612Mouse
1357532Bmch7_mbone mechanical trait 7 (mouse)Not determined175175842585758612Mouse
1357447Heal13_mwound healing/regeneration 13 (mouse)Not determined175710765191107803Mouse
4141758Pstc5_mperiosteal circumference 5 (mouse)Not determined175710765191107803Mouse
4141011Bmd26_mbone mineral density 26 (mouse)Not determined175710765191107803Mouse
1300735Pgia20_mproteoglycan induced arthritis 20 (mouse)Not determined175710765191107803Mouse
12910536Nrq8a_mnoise-induced hearing loss resistant QTL 8a (mouse)175710765191107803Mouse
12910537Nrq8_mnoise-induced hearing loss resistant QTL 8 (mouse)175710765191107803Mouse
4142201Obrq15_mobesity resistance QTL 15 (mouse)Not determined5753444780885776Mouse
4142414Pregq4_mpregnancy QTL 4 (mouse)Not determined175753444793507179Mouse
4141040Hmtb9_mhemostasis and thrombosis rebleeding time 9 (mouse)Not determined5758908991589197Mouse
1301107Scc4_mcolon tumor susceptibility 4 (mouse)Not determined176230101095294699Mouse
11528551Sluc32_msusceptibility to lung cancer 32 (mouse)176230101095294699Mouse
1302017Aliq3_macute lung injury QTL 3 (mouse)Not determined176388554895294699Mouse
1301728Ffal1_mfree fatty acid level 1 (mouse)Not determined176521493895294699Mouse
14928308Manh82_mmandible shape 82 (mouse)176631524395294699Mouse
13464254Ifvrq3_minfluenza virus resistance QTL 3 (mouse)176795765583908089Mouse
4142256Nilac12_mnicotine induced locomotor activity 12 (mouse)Not determined176894131995294699Mouse
11039500Ltpr7c_mLeishmania tropica response 7c (mouse)177070119895294699Mouse
11039498Ltpr7b_mLeishmania tropica response 7b (mouse)177070119895294699Mouse
11039499Ltpr7a_mLeishmania tropica response 7a (mouse)177070119895294699Mouse
11039514Ltpr7_mLeishmania tropica response 7 (mouse)177070119895294699Mouse
1357528Nhdlq3_mnon-HDL QTL 3 (mouse)Not determined177339513295294699Mouse
4141195Nilac11_mnicotine induced locomotor activity 11 (mouse)Not determined177339513295294699Mouse
4141697Hbnr3_mHeligmosomoides bakeri nematode resistance 3 (mouse)Not determined7410765193507179Mouse
1357646Axtq3_manxiety QTL 3 (mouse)Not determined177458908990395270Mouse
1357552Aaj4_manxiety in A/J 4 (mouse)Not determined177458908990395270Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001368309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001368310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001368311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001368312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001368313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001368314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001414401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001414402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001414403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001414404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001414405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001414406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001414407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001414408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_201361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC132612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK034617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK084970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK085058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK138794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC024059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BR000694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT486008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000040368   ⟹   ENSMUSP00000044543
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1779,922,329 - 79,989,581 (+)Ensembl
GRCm38.p6 Ensembl1779,614,900 - 79,682,152 (+)Ensembl
RefSeq Acc Id: ENSMUST00000086570   ⟹   ENSMUSP00000083761
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1779,929,199 - 79,957,734 (+)Ensembl
GRCm38.p6 Ensembl1779,621,770 - 79,650,305 (+)Ensembl
RefSeq Acc Id: ENSMUST00000223555
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1779,934,080 - 79,936,110 (+)Ensembl
GRCm38.p6 Ensembl1779,626,651 - 79,628,681 (+)Ensembl
RefSeq Acc Id: ENSMUST00000223924   ⟹   ENSMUSP00000153264
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1779,919,292 - 79,929,045 (+)Ensembl
GRCm38.p6 Ensembl1779,611,863 - 79,621,616 (+)Ensembl
RefSeq Acc Id: ENSMUST00000224014   ⟹   ENSMUSP00000153400
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1779,921,410 - 79,929,115 (+)Ensembl
GRCm38.p6 Ensembl1779,613,981 - 79,621,686 (+)Ensembl
RefSeq Acc Id: ENSMUST00000224097   ⟹   ENSMUSP00000153145
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1779,989,062 - 79,992,405 (+)Ensembl
GRCm38.p6 Ensembl1779,681,633 - 79,684,976 (+)Ensembl
RefSeq Acc Id: ENSMUST00000224618   ⟹   ENSMUSP00000153203
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1779,934,098 - 79,959,230 (+)Ensembl
GRCm38.p6 Ensembl1779,626,669 - 79,651,801 (+)Ensembl
RefSeq Acc Id: ENSMUST00000225357   ⟹   ENSMUSP00000153443
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1779,922,491 - 79,989,678 (+)Ensembl
GRCm38.p6 Ensembl1779,615,062 - 79,682,249 (+)Ensembl
RefSeq Acc Id: ENSMUST00000226004   ⟹   ENSMUSP00000152929
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1779,979,829 - 80,000,621 (+)Ensembl
GRCm38.p6 Ensembl1779,672,400 - 79,693,192 (+)Ensembl
RefSeq Acc Id: NM_001368309   ⟹   NP_001355238
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,646 - 79,990,242 (+)NCBI
GRCm381779,615,217 - 79,682,812 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001368310   ⟹   NP_001355239
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,934,104 - 79,992,405 (+)NCBI
GRCm381779,626,675 - 79,684,976 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001368311   ⟹   NP_001355240
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,934,104 - 79,992,405 (+)NCBI
GRCm381779,626,675 - 79,684,976 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001368312   ⟹   NP_001355241
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,646 - 79,992,405 (+)NCBI
GRCm381779,615,217 - 79,684,976 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001368313   ⟹   NP_001355242
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,646 - 79,990,242 (+)NCBI
GRCm381779,615,217 - 79,682,812 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001368314   ⟹   NP_001355243
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,646 - 79,990,242 (+)NCBI
GRCm381779,615,217 - 79,682,812 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001414401   ⟹   NP_001401330
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,954 - 79,990,242 (+)NCBI
RefSeq Acc Id: NM_001414402   ⟹   NP_001401331
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,954 - 79,990,242 (+)NCBI
RefSeq Acc Id: NM_001414403   ⟹   NP_001401332
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,646 - 79,990,242 (+)NCBI
RefSeq Acc Id: NM_001414404   ⟹   NP_001401333
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,646 - 79,992,405 (+)NCBI
RefSeq Acc Id: NM_001414405   ⟹   NP_001401334
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,646 - 79,992,405 (+)NCBI
RefSeq Acc Id: NM_001414406   ⟹   NP_001401335
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,646 - 80,000,630 (+)NCBI
RefSeq Acc Id: NM_001414407   ⟹   NP_001401336
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,646 - 79,992,405 (+)NCBI
RefSeq Acc Id: NM_001414408   ⟹   NP_001401337
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,954 - 79,992,405 (+)NCBI
RefSeq Acc Id: NM_201361   ⟹   NP_958749
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,329 - 79,990,242 (+)NCBI
GRCm381779,614,900 - 79,682,152 (+)NCBI
MGSCv371780,014,240 - 80,081,492 (+)RGD
Celera1783,926,320 - 83,993,610 (+)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006524496   ⟹   XP_006524559
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,923,083 - 79,992,405 (+)NCBI
GRCm381779,615,643 - 79,684,976 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524497   ⟹   XP_006524560
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,328 - 79,992,405 (+)NCBI
GRCm381779,614,899 - 79,684,976 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524498   ⟹   XP_006524561
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,886,025 - 79,992,405 (+)NCBI
GRCm381779,578,596 - 79,684,976 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524499   ⟹   XP_006524562
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,249 - 79,992,405 (+)NCBI
GRCm381779,614,817 - 79,684,976 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524501   ⟹   XP_006524564
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,548 - 79,990,242 (+)NCBI
GRCm381779,615,119 - 79,682,813 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524502   ⟹   XP_006524565
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,548 - 79,992,405 (+)NCBI
GRCm381779,615,119 - 79,684,976 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524503   ⟹   XP_006524566
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,548 - 79,975,373 (+)NCBI
GRCm381779,615,119 - 79,667,710 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524507   ⟹   XP_006524570
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,922,328 - 79,992,405 (+)NCBI
GRCm381779,614,899 - 79,684,976 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030249874   ⟹   XP_030105734
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,929,116 - 79,990,242 (+)NCBI
GRCm381779,621,687 - 79,682,813 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036160671   ⟹   XP_036016564
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,925,759 - 79,992,405 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036160673   ⟹   XP_036016566
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,926,092 - 79,992,405 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001355238 (Get FASTA)   NCBI Sequence Viewer  
  NP_001355239 (Get FASTA)   NCBI Sequence Viewer  
  NP_001355240 (Get FASTA)   NCBI Sequence Viewer  
  NP_001355241 (Get FASTA)   NCBI Sequence Viewer  
  NP_001355242 (Get FASTA)   NCBI Sequence Viewer  
  NP_001355243 (Get FASTA)   NCBI Sequence Viewer  
  NP_001401330 (Get FASTA)   NCBI Sequence Viewer  
  NP_001401331 (Get FASTA)   NCBI Sequence Viewer  
  NP_001401332 (Get FASTA)   NCBI Sequence Viewer  
  NP_001401333 (Get FASTA)   NCBI Sequence Viewer  
  NP_001401334 (Get FASTA)   NCBI Sequence Viewer  
  NP_001401335 (Get FASTA)   NCBI Sequence Viewer  
  NP_001401336 (Get FASTA)   NCBI Sequence Viewer  
  NP_001401337 (Get FASTA)   NCBI Sequence Viewer  
  NP_958749 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524559 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524560 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524561 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524562 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524564 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524565 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524566 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524570 (Get FASTA)   NCBI Sequence Viewer  
  XP_030105734 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016564 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016566 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH24059 (Get FASTA)   NCBI Sequence Viewer  
  BAB29598 (Get FASTA)   NCBI Sequence Viewer  
  BAC28771 (Get FASTA)   NCBI Sequence Viewer  
  BAE23985 (Get FASTA)   NCBI Sequence Viewer  
  EDL38486 (Get FASTA)   NCBI Sequence Viewer  
  EDL38487 (Get FASTA)   NCBI Sequence Viewer  
  EDL38488 (Get FASTA)   NCBI Sequence Viewer  
  EDL38489 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000044543
  ENSMUSP00000044543.3
  ENSMUSP00000083761.3
  ENSMUSP00000152929.2
  ENSMUSP00000153145.2
  ENSMUSP00000153203.2
  ENSMUSP00000153264.2
  ENSMUSP00000153400.2
  ENSMUSP00000153443
  ENSMUSP00000153443.2
GenBank Protein FAA00419 (Get FASTA)   NCBI Sequence Viewer  
  Q8BSE0 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_958749   ⟸   NM_201361
- Peptide Label: isoform 1
- UniProtKB: A9UN02 (UniProtKB/Swiss-Prot),   Q8CIF1 (UniProtKB/Swiss-Prot),   Q8BSE0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006524561   ⟸   XM_006524498
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006524562   ⟸   XM_006524499
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006524560   ⟸   XM_006524497
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006524570   ⟸   XM_006524507
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006524565   ⟸   XM_006524502
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006524564   ⟸   XM_006524501
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006524566   ⟸   XM_006524503
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006524559   ⟸   XM_006524496
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001355241   ⟸   NM_001368312
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001355238   ⟸   NM_001368309
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001355243   ⟸   NM_001368314
- Peptide Label: isoform 1
- UniProtKB: Q8BSE0 (UniProtKB/Swiss-Prot),   A9UN02 (UniProtKB/Swiss-Prot),   Q8CIF1 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001355242   ⟸   NM_001368313
- Peptide Label: isoform 6
RefSeq Acc Id: XP_030105734   ⟸   XM_030249874
- Peptide Label: isoform X6
RefSeq Acc Id: NP_001355239   ⟸   NM_001368310
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001355240   ⟸   NM_001368311
- Peptide Label: isoform 4
RefSeq Acc Id: ENSMUSP00000153264   ⟸   ENSMUST00000223924
RefSeq Acc Id: ENSMUSP00000083761   ⟸   ENSMUST00000086570
RefSeq Acc Id: ENSMUSP00000044543   ⟸   ENSMUST00000040368
RefSeq Acc Id: ENSMUSP00000153443   ⟸   ENSMUST00000225357
RefSeq Acc Id: ENSMUSP00000153203   ⟸   ENSMUST00000224618
RefSeq Acc Id: ENSMUSP00000153400   ⟸   ENSMUST00000224014
RefSeq Acc Id: ENSMUSP00000153145   ⟸   ENSMUST00000224097
RefSeq Acc Id: ENSMUSP00000152929   ⟸   ENSMUST00000226004
RefSeq Acc Id: XP_036016564   ⟸   XM_036160671
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036016566   ⟸   XM_036160673
- Peptide Label: isoform X4
RefSeq Acc Id: NP_001401335   ⟸   NM_001414406
- Peptide Label: isoform 8
RefSeq Acc Id: NP_001401336   ⟸   NM_001414407
- Peptide Label: isoform 7
RefSeq Acc Id: NP_001401333   ⟸   NM_001414404
- Peptide Label: isoform 10
RefSeq Acc Id: NP_001401334   ⟸   NM_001414405
- Peptide Label: isoform 9
RefSeq Acc Id: NP_001401332   ⟸   NM_001414403
- Peptide Label: isoform 10
RefSeq Acc Id: NP_001401337   ⟸   NM_001414408
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001401330   ⟸   NM_001414401
- Peptide Label: isoform 1
- UniProtKB: Q8BSE0 (UniProtKB/Swiss-Prot),   A9UN02 (UniProtKB/Swiss-Prot),   Q8CIF1 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001401331   ⟸   NM_001414402
- Peptide Label: isoform 6

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BSE0-F1-model_v2 AlphaFold Q8BSE0 1-410 view protein structure

Promoters
RGD ID:13676826
Promoter ID:EPDNEW_M22562
Type:multiple initiation site
Name:Rmdn2_2
Description:Mus musculus regulator of microtubule dynamics 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22563  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381779,615,065 - 79,615,125EPDNEW
RGD ID:13676828
Promoter ID:EPDNEW_M22563
Type:initiation region
Name:Rmdn2_1
Description:Mus musculus regulator of microtubule dynamics 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22562  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381779,615,244 - 79,615,304EPDNEW
RGD ID:13676830
Promoter ID:EPDNEW_M22564
Type:initiation region
Name:4921513D11Rik_1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381779,626,675 - 79,626,735EPDNEW
RGD ID:6828084
Promoter ID:MM_KWN:24256
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day4,   Brain,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000112443,   NM_201361
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361780,013,936 - 80,014,717 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2147043 AgrOrtholog
Ensembl Genes ENSMUSG00000036368 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000040368 ENTREZGENE
  ENSMUST00000040368.3 UniProtKB/Swiss-Prot
  ENSMUST00000086570.3 UniProtKB/TrEMBL
  ENSMUST00000223924.2 UniProtKB/TrEMBL
  ENSMUST00000224014.2 UniProtKB/TrEMBL
  ENSMUST00000224097.2 UniProtKB/TrEMBL
  ENSMUST00000224618.2 UniProtKB/TrEMBL
  ENSMUST00000225357 ENTREZGENE
  ENSMUST00000225357.2 UniProtKB/Swiss-Prot
  ENSMUST00000226004.2 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.10 UniProtKB/Swiss-Prot
InterPro RMD1-3_a_helical_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/Swiss-Prot
KEGG Report mmu:381110 UniProtKB/Swiss-Prot
MGD MGI:2147043 ENTREZGENE
NCBI Gene 381110 ENTREZGENE
PANTHER REGULATOR OF MICROTUBULE DYNAMICS PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  REGULATOR OF MICROTUBULE DYNAMICS PROTEIN 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam RMD1-3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rmdn2 PhenoGen
Superfamily-SCOP SSF48452 UniProtKB/Swiss-Prot
UniProt A0A286YCD4_MOUSE UniProtKB/TrEMBL
  A0A286YCV4_MOUSE UniProtKB/TrEMBL
  A0A286YCZ2_MOUSE UniProtKB/TrEMBL
  A0A286YD39_MOUSE UniProtKB/TrEMBL
  A0A286YDW5_MOUSE UniProtKB/TrEMBL
  A9UN02 ENTREZGENE
  G3X9J2_MOUSE UniProtKB/TrEMBL
  Q8BSE0 ENTREZGENE
  Q8CIF1 ENTREZGENE
  Q9D5W3_MOUSE UniProtKB/TrEMBL
  RMD2_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary A9UN02 UniProtKB/Swiss-Prot
  Q8CIF1 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-05-18 Rmdn2  regulator of microtubule dynamics 2  4921513D11Rik  RIKEN cDNA 4921513D11 gene  Data merged from RGD:1610377 737654 PROVISIONAL
2013-02-20 Rmdn2  regulator of microtubule dynamics 2  Fam82a1  family with sequence similarity 82, member A1  Symbol and/or name change 5135510 APPROVED