Snhg17 (small nucleolar RNA host gene 17) - Rat Genome Database

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Gene: Snhg17 (small nucleolar RNA host gene 17) Mus musculus
Analyze
Symbol: Snhg17
Name: small nucleolar RNA host gene 17
RGD ID: 1620029
MGI Page MGI
Description: Involved in gene expression. Acts upstream of or within response to wounding. Is active in nucleus.
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: 9430008C03Rik
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392158,195,620 - 158,203,442 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2158,195,620 - 158,203,501 (-)EnsemblGRCm39 Ensembl
GRCm382158,353,700 - 158,361,522 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2158,353,700 - 158,361,580 (-)EnsemblGRCm38mm10GRCm38
MGSCv372158,179,436 - 158,187,258 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362158,046,164 - 158,052,417 (-)NCBIMGSCv36mm8
Celera2164,289,995 - 164,297,813 (-)NCBICelera
Cytogenetic Map2H1NCBI
cM Map278.72NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IDA)

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:10834841   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15741177   PMID:16141072   PMID:16141073  
PMID:18799693   PMID:21267068   PMID:24917243   PMID:27783602   PMID:32627655  


Genomics

Variants

.
Variants in Snhg17
358 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1068
Count of miRNA genes:445
Interacting mature miRNAs:504
Transcripts:ENSMUST00000133449, ENSMUST00000138592, ENSMUST00000141809, ENSMUST00000149667, ENSMUST00000151331, ENSMUST00000152125, ENSMUST00000154030, ENSMUST00000154242
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
27226788Feml13_mfemur length 13, 10 week (mouse)2102630345159941920Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2117942930174324863Mouse
12910795Pwbwq5_mpost-weaning body weight QTL 5 (mouse)2118589253160611165Mouse
12910799Pwgrq2_mpre-weaning growth rate QTL 2 (mouse)2118589253160611165Mouse
12910812Pwgrq1_mpre-weaning growth rate QTL 1 (mouse)2118589253160611165Mouse
12910814Pwbwq1_mpre-weaning body weight QTL 1 (mouse)2118589253160611165Mouse
27226749Femd10_mfemur midshaft diameter 10, 16 week (mouse)2124441920168241920Mouse
1302143Bwq5_mbody weight (mouse)Not determined2127664019161664118Mouse
1301031Bdln3_mbody length 3 (mouse)Not determined2127664019161664118Mouse
12880427V25Dq3_mvitamin D inactive form serum level QTL 3 (mouse)2129341920163341920Mouse
1301961Bts1_mbladder tumor susceptibility 1 (mouse)Not determined2132024159166024330Mouse
11049567Lmr28f_mleishmaniasis resistance 28f (mouse)2133144911167145058Mouse
11049566Lmr28e_mleishmaniasis resistance 28e (mouse)2133144911167145058Mouse
11341717Rvfs1_mRift Valley fever susceptibility 1 (mouse)2135432544173449616Mouse
4141703Chlq13_mcirculating hormone level QTL 13 (mouse)Not determined2135699221169699361Mouse
1301907Rends_mrenal disease susceptibility (mouse)Not determined2135699221169699361Mouse
10043956Gnf5_mgrowth and fatness 5 (mouse)Not determined2135699221169699361Mouse
10054066Bwq9_mbody weight QTL 9 (mouse)Not determined2135699221169699361Mouse
1300846Pbwg11_mpostnatal body weight growth 11 (mouse)Not determined2138966600172966729Mouse
11353826Bdln10_mbody length 10 (mouse)2140441482174441482Mouse
12801461Intim1_mintima modifier 1 (mouse)2142428347176428450Mouse
12801456Intmrm1_mintima/media ratio modifier 1 (mouse)2142428347176428450Mouse
1301783Bhr1_mbronchial hyperresponsiveness 1 (mouse)Not determined2142593476178442452Mouse
4141033Wg2d_mweight gain in high growth mice 2d (mouse)Not determined143773445160303008Mouse
1357484Bsbob_mBSB obesity (mouse)Not determined2143773445165665019Mouse
1558939Gnf1_mgrowth and fatness 1 (mouse)Not determined2143773445169117924Mouse
1300867Lore2_mloss of righting induced by ethanol 2 (mouse)Not determined2144515861180896594Mouse
1302013Tbbmd3_mtotal body bone mineral density 3 (mouse)Not determined2145196949179197085Mouse
1300806Aod4_mautoimmune ovarian dysgenesis 4 (mouse)Not determined2145228719179228841Mouse
1301865Hdlq19_mHDL QTL 19 (mouse)Not determined2145518775179518926Mouse
13504830Bacsq1_mbaculum shape QTL 1 (mouse)2145716184161016184Mouse
12790983Bwq12_mbody weight QTL 12 (mouse)2148238204181755017Mouse
4142211Nilac3_mnicotine induced locomotor activity 3 (mouse)Not determined2148664893181755017Mouse
1558917Gct8_mgranulosa cell tumorigenesis 8 (mouse)Not determined2149236907181755017Mouse
1300751Bdt1_mbone density traits 1 (mouse)Not determined2149988902181755017Mouse
1301085Lrnx10_mlearning-contextual 10 (mouse)Not determined2150212221181755017Mouse
11038701Ltpr2e_mLeishmania tropica response 2e (mouse)2150212221181755017Mouse
4142450Lmr16_mleishmaniasis resistance 16 (mouse)Not determined2150212221181755017Mouse
1357862Epfq1_mepididymal fat pad weight QTL 1 (mouse)Not determined2151640941162737074Mouse
1357772Scfq1_msubcutaneous fat pad weight QTL 1 (mouse)Not determined2151640941162737074Mouse
1558842Tailq2_mtail length QTL 2 (mouse)Not determined2151640941162737074Mouse
10412080Hylaq2_mHyperlocomotor activity related QTL 2 (mouse)Not determined2151640941164119146Mouse
12910520Scgq3_mspontaneous crescentic glomerulonephritis QTL 3 (mouse)2151709273174389124Mouse
1301019Bmd6_mbone mineral density 6 (mouse)Not determined2151778297181755017Mouse
13825247Agoc2_magouti coat color QTL 2 (mouse)2151841920159841920Mouse
14747002Mancz3_mmandible centroid size 3 (mouse)2152329820181755017Mouse
1558852Gnf2_mgrowth and fatness 2 (mouse)Not determined2152699221162197085Mouse
1558867Gnf3_mgrowth and fatness 3 (mouse)Not determined2152699221169117924Mouse
1301588Hrec_mhemotopoietic response to early cytokines (mouse)Not determined2154553217159428450Mouse
1300622Cfld1_mcystic fibrosis lung disease 1 (mouse)Not determined2155823920181755017Mouse
1357537Lith12_mlithogenic gene 12 (mouse)Not determined2156196464181755017Mouse
1300688Nidd2k_mNidd2 on KK-A (mouse)Not determined2158078337178442452Mouse


Expression


Sequence


RefSeq Acc Id: ENSMUST00000133449
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,195,620 - 158,203,501 (-)Ensembl
GRCm38.p6 Ensembl2158,355,765 - 158,361,580 (-)Ensembl
RefSeq Acc Id: ENSMUST00000138592
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,462 (-)Ensembl
GRCm38.p6 Ensembl2158,360,867 - 158,361,542 (-)Ensembl
RefSeq Acc Id: ENSMUST00000141809
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,227 - 158,203,492 (-)Ensembl
GRCm38.p6 Ensembl2158,355,307 - 158,361,510 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149667
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,705 - 158,203,433 (-)Ensembl
GRCm38.p6 Ensembl2158,355,785 - 158,361,513 (-)Ensembl
RefSeq Acc Id: ENSMUST00000151331
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,195,620 - 158,203,501 (-)Ensembl
GRCm38.p6 Ensembl2158,359,239 - 158,361,475 (-)Ensembl
RefSeq Acc Id: ENSMUST00000152125
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,439 (-)Ensembl
GRCm38.p6 Ensembl2158,355,765 - 158,361,519 (-)Ensembl
RefSeq Acc Id: ENSMUST00000154030
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,442 (-)Ensembl
GRCm38.p6 Ensembl2158,355,765 - 158,361,522 (-)Ensembl
RefSeq Acc Id: ENSMUST00000154242
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,195,624 - 158,203,470 (-)Ensembl
GRCm38.p6 Ensembl2158,356,022 - 158,358,464 (-)Ensembl
RefSeq Acc Id: ENSMUST00000186993
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,195,620 - 158,198,763 (-)Ensembl
GRCm38.p6 Ensembl2158,353,700 - 158,356,843 (-)Ensembl
RefSeq Acc Id: ENSMUST00000240884
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,698 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000240906
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000240979
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000241034
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,195,624 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000241120
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,703 - 158,203,399 (-)Ensembl
RefSeq Acc Id: ENSMUST00000241141
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,431 (-)Ensembl
RefSeq Acc Id: ENSMUST00000241156
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,195,620 - 158,203,470 (-)Ensembl
RefSeq Acc Id: ENSMUST00000241272
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,431 (-)Ensembl
RefSeq Acc Id: ENSMUST00000241328
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,692 - 158,203,465 (-)Ensembl
RefSeq Acc Id: ENSMUST00000241390
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,442 (-)Ensembl
RefSeq Acc Id: ENSMUST00000241430
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,442 (-)Ensembl
RefSeq Acc Id: ENSMUST00000241685
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,698 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000241768
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,440 (-)Ensembl
RefSeq Acc Id: ENSMUST00000241993
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,702 - 158,203,381 (-)Ensembl
RefSeq Acc Id: ENSMUST00000242018
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,470 (-)Ensembl
RefSeq Acc Id: ENSMUST00000242141
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,452 (-)Ensembl
RefSeq Acc Id: ENSMUST00000242263
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,703 - 158,203,440 (-)Ensembl
RefSeq Acc Id: ENSMUST00000242338
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,470 (-)Ensembl
RefSeq Acc Id: ENSMUST00000242413
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,698 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000242470
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,698 - 158,203,453 (-)Ensembl
RefSeq Acc Id: ENSMUST00000242590
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,470 (-)Ensembl
RefSeq Acc Id: ENSMUST00000242651
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,700 - 158,203,442 (-)Ensembl
RefSeq Acc Id: ENSMUST00000242779
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000242851
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,195,620 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000243123
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,703 - 158,203,440 (-)Ensembl
RefSeq Acc Id: ENSMUST00000243141
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,202,532 (-)Ensembl
RefSeq Acc Id: ENSMUST00000243182
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,702 - 158,203,442 (-)Ensembl
RefSeq Acc Id: ENSMUST00000243247
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,434 (-)Ensembl
RefSeq Acc Id: ENSMUST00000243444
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,418 (-)Ensembl
RefSeq Acc Id: ENSMUST00000243611
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,415 (-)Ensembl
RefSeq Acc Id: ENSMUST00000243663
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000243690
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,445 (-)Ensembl
RefSeq Acc Id: ENSMUST00000243770
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000244056
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,698 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000244110
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,442 (-)Ensembl
RefSeq Acc Id: ENSMUST00000244199
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,445 (-)Ensembl
RefSeq Acc Id: ENSMUST00000244303
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,698 - 158,203,470 (-)Ensembl
RefSeq Acc Id: ENSMUST00000244399
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,431 (-)Ensembl
RefSeq Acc Id: ENSMUST00000244620
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,442 (-)Ensembl
RefSeq Acc Id: ENSMUST00000244641
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,445 (-)Ensembl
RefSeq Acc Id: ENSMUST00000244675
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,706 - 158,203,412 (-)Ensembl
RefSeq Acc Id: ENSMUST00000244782
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000244891
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000245234
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,703 - 158,203,475 (-)Ensembl
RefSeq Acc Id: ENSMUST00000245424
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,437 (-)Ensembl
RefSeq Acc Id: ENSMUST00000245468
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,470 (-)Ensembl
RefSeq Acc Id: ENSMUST00000245670
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,703 - 158,203,403 (-)Ensembl
RefSeq Acc Id: ENSMUST00000245711
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,440 (-)Ensembl
RefSeq Acc Id: ENSMUST00000245772
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000245796
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,702 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000245905
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,702 - 158,203,442 (-)Ensembl
RefSeq Acc Id: ENSMUST00000245937
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246135
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,442 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246155
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,412 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246207
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,202,529 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246264
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246319
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,700 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246392
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,445 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246445
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,697 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246484
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,442 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246527
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,466 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246547
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246588
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,703 - 158,203,399 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246673
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,452 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246719
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,702 - 158,203,470 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246829
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,410 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246894
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,460 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246925
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246988
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,703 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000247134
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,412 (-)Ensembl
RefSeq Acc Id: ENSMUST00000247185
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000247252
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000247255
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,699 - 158,203,403 (-)Ensembl
RefSeq Acc Id: ENSMUST00000247266
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,703 - 158,203,442 (-)Ensembl
RefSeq Acc Id: ENSMUST00000247293
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,702 - 158,203,431 (-)Ensembl
RefSeq Acc Id: ENSMUST00000247299
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,685 - 158,203,442 (-)Ensembl
RefSeq Acc Id: ENSMUST00000247345
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2158,197,702 - 158,203,410 (-)Ensembl
RefSeq Acc Id: NR_015463
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392158,195,620 - 158,203,429 (-)NCBI
GRCm382158,353,700 - 158,361,509 (-)NCBI
MGSCv372158,179,436 - 158,187,258 (-)RGD
Celera2164,289,995 - 164,297,813 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_027887
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392158,195,620 - 158,203,442 (-)NCBI
GRCm382158,353,700 - 158,361,522 (-)ENTREZGENE
MGSCv372158,179,436 - 158,187,258 (-)RGD
Celera2164,289,995 - 164,297,813 (-)RGD
cM Map2 ENTREZGENE
Sequence:
Promoters
RGD ID:6830741
Promoter ID:MM_KWN:32731
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000037837,   OTTMUST00000037838,   OTTMUST00000037839,   OTTMUST00000037841,   OTTMUST00000037842,   OTTMUST00000037844,   UC008NQC.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362158,186,931 - 158,187,607 (-)MPROMDB
RGD ID:15092450
Promoter ID:EPDNEWNC_M360
Type:initiation region
Name:Snhg17_1
Description:small nucleolar RNA host gene 17 [Source:MGISymbol;Acc:MGI:1915358]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382158,361,513 - 158,361,573EPDNEWNC
RGD ID:6879494
Promoter ID:EPDNEW_M3198
Type:initiation region
Name:Snhg17_1
Description:Mus musculus small nucleolar RNA host gene 17 , transcript variant1, long non-coding RNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382158,361,522 - 158,361,582EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000085385 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000133449 ENTREZGENE
  ENSMUST00000242851 ENTREZGENE
MGD MGI:1915358 ENTREZGENE
NCBI Gene 68108 ENTREZGENE
PhenoGen Snhg17 PhenoGen
RNAcentral URS000075D622 RNACentral
  URS000075EFB3 RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-05-26 Snhg17  small nucleolar RNA host gene 17  9430008C03Rik  RIKEN cDNA 9430008C03 gene  Symbol and/or name change 5135510 APPROVED