Ric3 (RIC3 acetylcholine receptor chaperone) - Rat Genome Database

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Gene: Ric3 (RIC3 acetylcholine receptor chaperone) Mus musculus
Analyze
Symbol: Ric3
Name: RIC3 acetylcholine receptor chaperone
RGD ID: 1619704
MGI Page MGI
Description: Enables protein folding chaperone. Acts upstream of or within protein-containing complex assembly. Located in endoplasmic reticulum and membrane. Orthologous to human RIC3 (RIC3 acetylcholine receptor chaperone).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: E130307J04Rik; protein RIC-3; resistance to inhibitors of cholinesterase 3 homolog; resistant to inhibitor of cholinesterase 3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397108,633,475 - 108,682,538 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7108,633,519 - 108,682,538 (-)EnsemblGRCm39 Ensembl
GRCm387109,034,268 - 109,083,432 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7109,034,312 - 109,083,331 (-)EnsemblGRCm38mm10GRCm38
MGSCv377116,177,833 - 116,226,838 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367108,825,496 - 108,874,501 (-)NCBIMGSCv36mm8
Celera7109,010,763 - 109,059,709 (-)NCBICelera
Cytogenetic Map7E3NCBI
cM Map757.21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:16141072   PMID:16141073   PMID:18420419   PMID:19812337   PMID:20562862  
PMID:20668195   PMID:21267068   PMID:21873635   PMID:27129882   PMID:32179243   PMID:32204458  


Genomics

Comparative Map Data
Ric3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397108,633,475 - 108,682,538 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7108,633,519 - 108,682,538 (-)EnsemblGRCm39 Ensembl
GRCm387109,034,268 - 109,083,432 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7109,034,312 - 109,083,331 (-)EnsemblGRCm38mm10GRCm38
MGSCv377116,177,833 - 116,226,838 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367108,825,496 - 108,874,501 (-)NCBIMGSCv36mm8
Celera7109,010,763 - 109,059,709 (-)NCBICelera
Cytogenetic Map7E3NCBI
cM Map757.21NCBI
RIC3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38118,092,965 - 8,169,025 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl118,106,056 - 8,169,055 (-)EnsemblGRCh38hg38GRCh38
GRCh37118,114,512 - 8,190,572 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36118,087,071 - 8,147,148 (-)NCBINCBI36Build 36hg18NCBI36
Celera118,243,232 - 8,308,762 (-)NCBICelera
Cytogenetic Map11p15.4NCBI
HuRef117,794,046 - 7,858,750 (-)NCBIHuRef
CHM1_1118,126,558 - 8,189,548 (-)NCBICHM1_1
T2T-CHM13v2.0118,172,123 - 8,249,969 (-)NCBIT2T-CHM13v2.0
Ric3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81172,465,638 - 172,521,349 (-)NCBIGRCr8
mRatBN7.21163,030,621 - 163,086,583 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1163,032,158 - 163,086,519 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1171,373,799 - 171,428,176 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01178,559,862 - 178,614,239 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01171,232,872 - 171,287,209 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01173,629,218 - 173,682,226 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1173,630,761 - 173,682,226 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01180,618,408 - 180,672,685 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41166,608,198 - 166,660,309 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1160,938,515 - 160,992,562 (-)NCBICelera
Cytogenetic Map1q33NCBI
Ric3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541423,925,149 - 23,967,991 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541423,925,149 - 23,967,772 (-)NCBIChiLan1.0ChiLan1.0
RIC3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2910,516,444 - 10,593,608 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11110,478,592 - 10,556,755 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0118,210,061 - 8,287,211 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1117,956,110 - 8,032,890 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl117,969,236 - 8,032,884 (-)Ensemblpanpan1.1panPan2
RIC3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12131,629,824 - 31,681,832 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2131,633,657 - 31,681,807 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2131,198,081 - 31,251,160 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02132,502,903 - 32,555,812 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2132,504,041 - 32,555,712 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12131,772,811 - 31,825,688 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02131,938,738 - 31,991,604 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02132,232,526 - 32,285,497 (-)NCBIUU_Cfam_GSD_1.0
Ric3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494753,756,543 - 53,795,140 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365289,790,463 - 9,825,777 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365289,790,594 - 9,829,120 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RIC3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl91,134,923 - 1,181,273 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.191,134,915 - 1,183,873 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.291,444,687 - 1,493,787 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RIC3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1156,632,448 - 56,691,964 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl156,631,898 - 56,690,207 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038154,358,714 - 154,414,008 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ric3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624766296,627 - 338,975 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624766294,702 - 338,574 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ric3
1649 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3607
Count of miRNA genes:828
Interacting mature miRNAs:1139
Transcripts:ENSMUST00000055993, ENSMUST00000120876, ENSMUST00000129629, ENSMUST00000133876, ENSMUST00000137385, ENSMUST00000147580
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
13208555Lgth10_mbody length 10 (mouse)751649748125599172Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
25823170Hrsq7_mhost response to SARS QTL 7, log titer (mouse)754819589116822815Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)761749748121399223Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)761749748123699223Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765249748126499172Mouse
27226715Metcl3_mmetatarsal-calcaneal length 3, 5 week (mouse)767849748119499223Mouse
26884444Sklq8_mskull length QTL 8, 10 week (mouse)767849748124199223Mouse
26884451Sklq14_mskull length QTL 14, 16 week (mouse)767849748124999172Mouse
27095907Scvln4_msacral vertebrae length 2, 5 week (mouse)769949748120499223Mouse
27095910Pglq13_mpelvic girdle length QTL 13, 16 week (mouse)773049748125699172Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
27226745Metcl9_mmetatarsal-calcaneal length 9, 10 week (mouse)774849748122199223Mouse
27226781Tibl3_mtibia length 3, 5 week (mouse)774849748122199223Mouse
1301566Adip3_madiposity 3 (mouse)Not determined775394215109394346Mouse
14746989Manh62_mmandible shape 62 (mouse)775742528109742528Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse
10412110Cctq1_mcentral corneal thickness QTL 1 (mouse)Not determined780551681114551791Mouse
4142500Morq1_mmodifier of Rs1 QTL 1 (mouse)Not determined80551681114551791Mouse
27095930Ulnl10_mulna length 10, 16 week (mouse)780849748126699172Mouse
27095923Pglq3_mpelvic girdle length QTL 3, 5 week (mouse)781249748124199223Mouse
27095903Scvln10_msacral vertebrae length 2, 10 week (mouse)781449748126499172Mouse
27226765Tibl18_mtibia length 18, 16 week (mouse)781849748126499172Mouse
27226763Feml20_mfemur length 20, 16 week (mouse)785049208124199223Mouse
1301997Cia7_mcollagen induced arthritis QTL 7 (mouse)Not determined785365595112533819Mouse
1301647Elpt_melevated leptin (mouse)Not determined786500186120500329Mouse
1301188Heal6_mwound healing/regeneration 6 (mouse)Not determined787043932121044066Mouse
1302062Stheal6_msoft tissue heal 6 (mouse)Not determined787043932121044066Mouse
13463473Hbbcq4_mhemoglobin concentration QTL 4 (mouse)787043932121044066Mouse
1301781Capsq3_mcapsaicin sensitivity related QTL 3 (mouse)Not determined787143137119485380Mouse
27226769Tibl12_mtibia length 12, 10 week (mouse)787249208126499172Mouse
27226790Feml15_mfemur length 15, 10 week (mouse)787249208126499172Mouse
1357664Nba3_mNew Zealand Black autoimmunity 3 (mouse)Not determined791482996125483156Mouse
1301937Skull10_mskull morphology 10 (mouse)Not determined791482996125483156Mouse
1300528Ssial3_msusceptibility to sialadenitis 3 (mouse)Not determined793391848127392041Mouse
1301478Eae26_msusceptibility to experimental allergic encephalomyelitis 26 (mouse)Not determined798164922132165010Mouse
13524850Asrq7_macoustic startle response 7 (mouse)798394974132394974Mouse
10412104Tons2_mtongue size 2 (mouse)Not determined799837716133837716Mouse
11039524Tbbr3_mTrypanosoma brucei brucei response 3 (mouse)7100750722134750843Mouse
1301447Fembm3_mfemoral bone morphometry 3 (mouse)Not determined7100993261134993342Mouse
1357460Vtbt4_mvertebral trabecular bone trait 4 (mouse)Not determined7101693381135693530Mouse
1301105Cfld4_mcystic fibrosis lung disease 4 (mouse)Not determined7101693381135693530Mouse
1300721Cfbw3_mcystic fibrosis body weight 3 (mouse)Not determined7101693381135693530Mouse
4142312Nilac4_mnicotine induced locomotor activity 4 (mouse)Not determined7102485219136485380Mouse
5491192Mobq1_mmultigenic obesity QTL 1 (mouse)Not determined7105250663139250811Mouse
13524852Asrq7a_macoustic startle response 7a (mouse)7105350008139350008Mouse
25394573Skmw62_mskeletal muscle weight 62, gastroc (mouse)7106893715110612309Mouse
13524524Bodwtq6_mbody wweight QTL 6 (mouse)7107245693113055693Mouse
4141056Lskcn2_mLSK cell number 2 (mouse)Not determined108482996118693530Mouse

Markers in Region
11.MMHAP80FLD2.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387109,066,981 - 109,067,138UniSTSGRCm38
MGSCv377116,210,495 - 116,210,652UniSTSGRCm37
Celera7109,043,366 - 109,043,523UniSTS
Cytogenetic Map7E3UniSTS
Whitehead_YAC7 UniSTS
UniSTS:235740  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387109,034,542 - 109,034,820UniSTSGRCm38
MGSCv377116,178,056 - 116,178,334UniSTSGRCm37
Celera7109,010,986 - 109,011,264UniSTS
Cytogenetic Map7E3UniSTS
cM Map751.45UniSTS
D7Mill3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387109,076,458 - 109,076,585UniSTSGRCm38
MGSCv377116,219,972 - 116,220,099UniSTSGRCm37
Celera7109,052,843 - 109,052,970UniSTS
Cytogenetic Map7E3UniSTS
cM Map751.46UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001038624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001311161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_178780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006507942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006507943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC121989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC167362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ296303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK043179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK138641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC059258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY241896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY279630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000055993   ⟹   ENSMUSP00000056990
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7108,633,519 - 108,682,538 (-)Ensembl
GRCm38.p6 Ensembl7109,034,312 - 109,083,331 (-)Ensembl
RefSeq Acc Id: ENSMUST00000120876   ⟹   ENSMUSP00000112788
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7108,637,155 - 108,682,529 (-)Ensembl
GRCm38.p6 Ensembl7109,037,948 - 109,083,322 (-)Ensembl
RefSeq Acc Id: ENSMUST00000129629
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7108,679,951 - 108,682,512 (-)Ensembl
GRCm38.p6 Ensembl7109,080,744 - 109,083,305 (-)Ensembl
RefSeq Acc Id: ENSMUST00000133876
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7108,644,589 - 108,682,518 (-)Ensembl
GRCm38.p6 Ensembl7109,045,382 - 109,083,311 (-)Ensembl
RefSeq Acc Id: ENSMUST00000137385
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7108,656,694 - 108,682,529 (-)Ensembl
GRCm38.p6 Ensembl7109,057,487 - 109,083,322 (-)Ensembl
RefSeq Acc Id: ENSMUST00000147580   ⟹   ENSMUSP00000116669
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7108,633,519 - 108,657,031 (-)Ensembl
GRCm38.p6 Ensembl7109,034,312 - 109,057,824 (-)Ensembl
RefSeq Acc Id: NM_001038624   ⟹   NP_001033713
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397108,633,526 - 108,682,531 (-)NCBI
GRCm387109,034,319 - 109,083,324 (-)NCBI
MGSCv377116,177,833 - 116,226,838 (-)RGD
Celera7109,010,763 - 109,059,709 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001311161   ⟹   NP_001298090
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397108,633,526 - 108,682,538 (-)NCBI
GRCm387109,034,319 - 109,083,331 (-)NCBI
Sequence:
RefSeq Acc Id: NM_178780   ⟹   NP_848895
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397108,645,940 - 108,682,531 (-)NCBI
GRCm387109,046,733 - 109,083,324 (-)NCBI
MGSCv377116,177,833 - 116,226,838 (-)RGD
Celera7109,010,763 - 109,059,709 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006507942   ⟹   XP_006508005
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397108,633,475 - 108,682,529 (-)NCBI
GRCm387109,034,268 - 109,057,871 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006507943   ⟹   XP_006508006
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397108,633,475 - 108,682,523 (-)NCBI
GRCm387109,034,268 - 109,083,322 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_001033713   ⟸   NM_001038624
- Peptide Label: isoform a precursor
- UniProtKB: Q6PCM7 (UniProtKB/Swiss-Prot),   Q8C4G2 (UniProtKB/Swiss-Prot),   Q8BPM6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_848895   ⟸   NM_178780
- Peptide Label: isoform b precursor
- UniProtKB: Q8BPM6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006508005   ⟸   XM_006507942
- Peptide Label: isoform X1
- UniProtKB: Q8BPM6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006508006   ⟸   XM_006507943
- Peptide Label: isoform X1
- UniProtKB: Q8BPM6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001298090   ⟸   NM_001311161
- Peptide Label: isoform c precursor
- UniProtKB: D3YTZ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000116669   ⟸   ENSMUST00000147580
RefSeq Acc Id: ENSMUSP00000112788   ⟸   ENSMUST00000120876
RefSeq Acc Id: ENSMUSP00000056990   ⟸   ENSMUST00000055993
Protein Domains
Resistance to inhibitors of cholinesterase protein

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BPM6-F1-model_v2 AlphaFold Q8BPM6 1-367 view protein structure

Promoters
RGD ID:8665177
Promoter ID:EPDNEW_M10620
Type:multiple initiation site
Name:Ric3_1
Description:Mus musculus RIC3 acetylcholine receptor chaperone , transcriptvariant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm387109,083,314 - 109,083,374EPDNEW
RGD ID:6841924
Promoter ID:MM_KWN:52236
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   ES_Cell
Transcripts:OTTMUST00000074981,   OTTMUST00000074983,   OTTMUST00000074986,   UC009JDH.1,   UC009JDJ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367116,226,564 - 116,227,064 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2443887 AgrOrtholog
Ensembl Genes ENSMUSG00000048330 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000055993 ENTREZGENE
  ENSMUST00000055993.13 UniProtKB/Swiss-Prot
  ENSMUST00000120876 ENTREZGENE
  ENSMUST00000120876.2 UniProtKB/TrEMBL
  ENSMUST00000147580.8 UniProtKB/TrEMBL
InterPro Ric3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RIC3_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:320360 UniProtKB/Swiss-Prot
MGD MGI:2443887 ENTREZGENE
NCBI Gene 320360 ENTREZGENE
PANTHER PROTEIN RIC-3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR21723 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam RIC3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ric3 PhenoGen
UniProt D3YTZ9 ENTREZGENE, UniProtKB/TrEMBL
  F7CE80_MOUSE UniProtKB/TrEMBL
  Q6PCM7 ENTREZGENE
  Q8BPM6 ENTREZGENE
  Q8C4G2 ENTREZGENE
  RIC3_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q6PCM7 UniProtKB/Swiss-Prot
  Q8C4G2 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-29 Ric3  RIC3 acetylcholine receptor chaperone    resistance to inhibitors of cholinesterase 3 homolog (C. elegans)  Symbol and/or name change 5135510 APPROVED