Gm21944 (predicted gene, 21944) - Rat Genome Database

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Gene: Gm21944 (predicted gene, 21944) Mus musculus
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Symbol: Gm21944
Name: predicted gene, 21944
RGD ID: 1619477
MGI Page MGI
Description:
Type: pseudo
RefSeq Status: PROVISIONAL
Previously known as: Defb48-ps
Related Functional Gene: Defb48  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39821,366,515 - 21,379,129 (+)NCBIGRCm39GRCm39mm39
GRCm38820,876,499 - 20,889,113 (+)NCBIGRCm38GRCm38mm10GRCm38
MGSCv36820,143,417 - 20,156,031 (-)NCBIMGSCv36mm8
Celera822,097,825 - 22,110,441 (+)NCBICelera
Cytogenetic Map8A2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:16033865   PMID:20003482  


Genomics

Variants

.
Variants in Gm21944
9 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13432571Scvg1_msubcutaneous vessel growth QTL 1 (mouse)8124751082Mouse
11533914Mts5_mmammary tumor susceptibility 5 (mouse)8130447432Mouse
4140978Nilac5_mnicotine induced locomotor activity 5 (mouse)Not determined8131773288Mouse
27226756Femd2_mfemur midshaft diameter 2, 5 week (mouse)8495000035067154Mouse
1357525Pnhdlc3_mplasma non-HDL cholesterol 3 (mouse)Not determined8721249923753815Mouse
1301532Scc8_mcolon tumor susceptibility 8 (mouse)Not determined8721249935110107Mouse
1300906Ap8q_malcohol preference 8 QTL (mouse)Not determined8798418941984342Mouse
10412209Cypr7_mcytokine production 7 (mouse)Not determined8810320142103372Mouse
1301929Eae24_msusceptibility to experimental allergic encephalomyelitis 24 (mouse)Not determined8810320142103372Mouse
1301128Sluc20_msusceptibility to lung cancer 20 (mouse)Not determined8810320142103372Mouse
11532713Sluc42_msusceptibility to lung cancer 42 (mouse)81344721035321225Mouse
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81477316071498244Mouse
1301088Alcw6_malcohol withdrawal 6 (mouse)Not determined81550657249506729Mouse
1300912Daq19_mdirectional asymmetry QTL 19 (mouse)Not determined81550657249506729Mouse
1301298Pgia4_mproteoglycan induced arthritis 4 (mouse)Not determined81656937350569697Mouse
4142199Poats1_mpost-ovarectomy adrenal tumor susceptibility 1 (mouse)Not determined1708262628849467Mouse
1301550Fembrs2_mfemur breaking strength 2 (mouse)Not determined81832109752321225Mouse
1301160Eae14_msusceptibility to experimental allergic encephalomyelitis 14 (mouse)Not determined81945501853455150Mouse
1300603Cd8ts2_mCD8 T cell subset 2 (mouse)Not determined81945501853455150Mouse


Expression


Sequence


RefSeq Acc Id: NR_002880
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39821,366,515 - 21,379,129 (+)NCBI
GRCm38820,876,499 - 20,889,113 (+)ENTREZGENE
Celera822,097,825 - 22,110,441 (+)RGD
cM Map8 ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
MGD MGI:5439395 ENTREZGENE
NCBI Gene 654455 ENTREZGENE
PhenoGen Gm21944 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-12-12 Gm21944  predicted gene, 21944  Defb48-ps  defensin beta 48 pseudogene  Symbol and/or name change 5135510 APPROVED