Grhl1 (grainyhead like transcription factor 1)

Gene: Grhl1 (grainyhead like transcription factor 1) Mus musculus

Analyze

Symbol:

Grhl1

Name:

grainyhead like transcription factor 1

RGD ID:

1618199

MGI Page

MGI

Description:

Enables transcription cis-regulatory region binding activity. Involved in epidermis development. Acts upstream of or within desmosome organization; establishment of skin barrier; and regulation of keratinocyte differentiation. Located in nucleus. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; heart; and sensory organ. Orthologous to human GRHL1 (grainyhead like transcription factor 1).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

grainyhead like 1; grainyhead-like 1; grainyhead-like 1 (Drosophila); grainyhead-like protein 1 homolog; LBP protein 32-like; LBP-; LBP-32; mammalian grainyhead; MGR; p61 MGR; p70 MGR; Tcfcp2; Tcfcp2l2; transcription factor CP2-like 2; transcription factor LBP-32

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GRHL1 (grainyhead like transcription factor 1)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Grhl1 (grainyhead-like transcription factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Grhl1 (grainyhead like transcription factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	GRHL1 (grainyhead like transcription factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	GRHL1 (grainyhead like transcription factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Grhl1 (grainyhead like transcription factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GRHL1 (grainyhead like transcription factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	GRHL1 (grainyhead like transcription factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Grhl1 (grainyhead like transcription factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	GRHL2 (grainyhead like transcription factor 2)	HGNC	OrthoMCL
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Grhl1 (grainyhead-like transcription factor 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	GRHL1 (grainyhead like transcription factor 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	grhl1 (grainyhead-like transcription factor 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	grh-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	grh	Alliance	DIOPT (Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	grhl1	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	24,622,234 - 24,667,390 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	24,622,282 - 24,667,390 (+)	Ensembl		GRCm39 Ensembl
GRCm38	12	24,572,232 - 24,617,391 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	24,572,283 - 24,617,391 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	25,257,152 - 25,302,256 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	25,169,798 - 25,206,467 (+)	NCBI		MGSCv36	mm8
Celera	12	26,034,221 - 26,079,315 (+)	NCBI		Celera
Cytogenetic Map	12	A1.3	NCBI
cM Map	12	8.49	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (ISO)

1,2-dichloroethane (EXP)

17beta-estradiol (ISO)

2,3',4,4',5-Pentachlorobiphenyl (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (EXP)

6-propyl-2-thiouracil (ISO)

acrylamide (ISO)

all-trans-retinoic acid (ISO)

amitrole (ISO)

antimonite (ISO)

antirheumatic drug (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

Benzo[k]fluoranthene (EXP)

bisphenol A (ISO)

bisphenol F (EXP)

buta-1,3-diene (EXP)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

calcitriol (ISO)

carbon nanotube (EXP)

CGP 52608 (ISO)

chloroprene (EXP)

choline (EXP)

ciguatoxin CTX1B (EXP)

cisplatin (ISO)

clofibrate (EXP)

copper atom (ISO)

copper(0) (ISO)

cyclosporin A (ISO)

diallyl disulfide (ISO)

dioxygen (ISO)

dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate (ISO)

disodium selenite (ISO)

dorsomorphin (ISO)

ethanol (EXP)

fenvalerate (ISO)

folic acid (EXP)

furan (EXP)

hydroquinone (ISO)

inulin (EXP)

L-methionine (EXP)

mercury dibromide (ISO)

methimazole (ISO)

methyl methanesulfonate (ISO)

methylisothiazolinone (ISO)

methylmercury chloride (ISO)

N-nitrosodiethylamine (EXP)

ozone (ISO)

panobinostat (ISO)

paracetamol (EXP,ISO)

pentanal (ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (EXP,ISO)

perfluorooctanoic acid (EXP)

phenobarbital (EXP)

pirinixic acid (EXP,ISO)

progesterone (ISO)

propanal (ISO)

raloxifene (ISO)

SB 431542 (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

sodium dodecyl sulfate (ISO)

sodium fluoride (EXP)

sulfadimethoxine (ISO)

tetrachloromethane (EXP,ISO)

thioacetamide (ISO)

titanium dioxide (EXP,ISO)

trichostatin A (ISO)

triclosan (ISO)

Triptolide (EXP)

trovafloxacin (EXP)

urethane (ISO)

valproic acid (EXP,ISO)

vinclozolin (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

desmosome organization (IMP)

epidermis development (IDA,IMP)

establishment of skin barrier (IMP)

positive regulation of transcription by RNA polymerase II (ISO)

regulation of DNA-templated transcription (ISA)

regulation of keratinocyte differentiation (IMP)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

intracellular membrane-bounded organelle (ISO)

nucleoplasm (ISO)

nucleus (IBA,IDA,ISO)

Molecular Function

chromatin DNA binding (ISO)

DNA binding (ISA)

DNA-binding transcription activator activity, RNA polymerase II-specific (IBA,ISO)

DNA-binding transcription factor activity (ISA)

DNA-binding transcription factor binding (ISO)

identical protein binding (ISO)

protein binding (ISO)

protein homodimerization activity (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA,ISO)

sequence-specific DNA binding (IDA,ISO)

sequence-specific double-stranded DNA binding (ISO)

transcription cis-regulatory region binding (IDA,ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal corneocyte envelope morphology (IAGP)

abnormal epidermal layer morphology (IAGP)

abnormal hair follicle morphology (IAGP)

alopecia (IAGP)

decreased body size (IEA)

delayed hair appearance (IAGP)

focal hair loss (IEA)

hyperkeratosis (IAGP)

impaired skin barrier function (IAGP)

postnatal growth retardation (IAGP)

postnatal lethality, complete penetrance (IAGP)

sparse hair (IAGP)

thick epidermis (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12175488	PMID:12466851	PMID:12477932	PMID:12666198	PMID:14697507	PMID:14744882
PMID:15489334	PMID:15618518	PMID:16141072	PMID:16141073	PMID:16602821	PMID:16831572	PMID:18287559	PMID:18288204	PMID:18832392	PMID:19334288	PMID:19501082	PMID:20059953
PMID:20412781	PMID:20978075	PMID:21081122	PMID:21267068	PMID:21873635	PMID:22988430	PMID:24586629	PMID:24952961	PMID:25901299	PMID:26371508	PMID:26975724	PMID:27782736
PMID:27907249	PMID:30193734	PMID:30194919	PMID:35013237	PMID:37660780

Genomics

Comparative Map Data

Grhl1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	24,622,234 - 24,667,390 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	24,622,282 - 24,667,390 (+)	Ensembl		GRCm39 Ensembl
GRCm38	12	24,572,232 - 24,617,391 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	24,572,283 - 24,617,391 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	25,257,152 - 25,302,256 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	25,169,798 - 25,206,467 (+)	NCBI		MGSCv36	mm8
Celera	12	26,034,221 - 26,079,315 (+)	NCBI		Celera
Cytogenetic Map	12	A1.3	NCBI
cM Map	12	8.49	NCBI

GRHL1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	9,951,693 - 10,002,277 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	9,951,693 - 10,002,277 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	10,091,822 - 10,142,405 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	10,009,273 - 10,059,856 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	2	10,007,717 - 10,058,329 (+)	NCBI		Celera
Cytogenetic Map	2	p25.1	NCBI
HuRef	2	9,942,567 - 9,993,653 (+)	NCBI		HuRef
CHM1_1	2	10,021,441 - 10,071,878 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	9,979,623 - 10,030,385 (+)	NCBI		T2T-CHM13v2.0

Grhl1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	46,935,947 - 46,986,126 (+)	NCBI		GRCr8
mRatBN7.2	6	41,207,325 - 41,257,516 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	41,207,348 - 41,254,301 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	6	43,734,837 - 43,795,757 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	43,743,702 - 43,794,342 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	60,602,932 - 60,668,616 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	42,217,279 - 42,260,621 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	42,132,033 - 42,263,747 (+)	NCBI
Celera	6	40,494,932 - 40,542,079 (+)	NCBI		Celera
Cytogenetic Map	6	q16	NCBI

Grhl1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955487	5,407,128 - 5,433,113 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955487	5,407,187 - 5,432,828 (+)	NCBI	ChiLan1.0	ChiLan1.0

GRHL1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	116,522,037 - 116,572,161 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	116,526,008 - 116,576,125 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	9,944,385 - 9,994,510 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	10,108,150 - 10,155,177 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	10,105,486 - 10,155,177 (+)	Ensembl	panpan1.1		panPan2

GRHL1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	6,953,945 - 7,007,175 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	6,953,836 - 7,006,134 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	6,882,122 - 6,934,414 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	7,053,267 - 7,105,654 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	7,052,104 - 7,105,639 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	6,945,283 - 6,997,603 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	6,947,411 - 6,999,812 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	6,961,516 - 7,013,871 (+)	NCBI		UU_Cfam_GSD_1.0

Grhl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	51,444,414 - 51,492,247 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936532	6,199,453 - 6,247,295 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936532	6,199,525 - 6,247,282 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GRHL1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	126,463,387 - 126,511,321 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	126,462,946 - 126,511,185 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	135,019,617 - 135,028,744 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GRHL1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	97,632,494 - 97,686,257 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666045	14,630,186 - 14,681,247 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Grhl1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624865	5,046,147 - 5,078,492 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624865	5,046,030 - 5,078,545 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Grhl1
1425 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	834
Count of miRNA genes:	350
Interacting mature miRNAs:	378
Transcripts:	ENSMUST00000020985, ENSMUST00000085553
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357519	Vtbt12_m	vertebral trabecular bone trait 12 (mouse)			Not determined		12	1	24662697	Mouse
1301655	Bmd12_m	bone mineral density 12 (mouse)			Not determined		12	1	24662697	Mouse
4141296	Femwf9_m	femur work to failure 9 (mouse)			Not determined			1	27920733	Mouse
4141436	Chldq7_m	cholesterol and HDL QTL 7 (mouse)			Not determined		12	1	27920733	Mouse
12910983	Pifs1_m	peptide-induced fatal syndrome 1 (mouse)					12	1	30433078	Mouse
1301925	Ath6_m	atherosclerosis 6 (mouse)			Not determined		12	1	32758756	Mouse
1301207	Circp1_m	circadian photosensitivity 1 (mouse)			Not determined		12	1	33430339	Mouse
4141660	Nbwa1_m	NZB and NZW autoimmunity 1 (mouse)			Not determined		12	340134	34340302	Mouse
26884410	Bzwq15_m	bi-zygomatic width QTL 15, 16 week (mouse)					12	3650000	29749999	Mouse
4142234	Tmc1m3_m	Tmc1 modifier 3 (mouse)			Not determined		12	5418440	77031203	Mouse
1301163	Eae16_m	susceptibility to experimental allergic encephalomyelitis 16 (mouse)			Not determined		12	7723158	41723301	Mouse
13208568	Bmiq11_m	body mass index QTL 11 (mouse)					12	8050000	40049999	Mouse
1301037	Cd4ts5_m	CD4 T cell subset 5 (mouse)			Not determined		12	8352444	42352581	Mouse
1301723	Fcsa7_m	femoral cross-sectional area 7 (mouse)			Not determined		12	9491004	43491112	Mouse
27226753	Femd7_m	femur midshaft diameter 7, 10 week (mouse)					12	9550000	84146774	Mouse
14746972	Manh72_m	mandible shape 72 (mouse)					12	10615281	44615281	Mouse
10401249	Bglu15_m	blood glucose level 15 (mouse)			Not determined		12	10620642	44620809	Mouse
13524843	Ppiq8_m	prepulse inhibition QTL 8 (mouse)					12	11043194	50945796	Mouse
13207568	Tcq14_m	total cholesterol QTL 14 (mouse)					12	11660001	97176774	Mouse
4141516	slwr_m	slowlearner (mouse)			Not determined			12392475	46392614	Mouse
13524839	Ppiq10_m	prepulse inhibition QTL 10 (mouse)					12	13043195	54945798	Mouse
10043977	Obq34_m	obesity QTL 34 (mouse)			Not determined		12	15147331	49147331	Mouse
1558978	Cplaq10_m	circadian period of locomotor activity 10 (mouse)			Not determined		12	15341026	79040364	Mouse
26884413	Bzwq9_m	bi-zygomatic width QTL 9, 10 week (mouse)					12	16150001	47746783	Mouse
1301574	Lmblgq5_m	limb length QTL 5 (mouse)			Not determined		12	17596447	80956883	Mouse
15039339	Nmrs29_m	NAFLD-associated magnetic resonance shift 29 (mouse)					12	17825852	51825852	Mouse
10043848	Hdlq90_m	HDL QTL 90 (mouse)			Not determined		12	17839939	51840081	Mouse
1300870	Ath18_m	atherosclerosis 18 (mouse)			Not determined		12	18259966	52260067	Mouse
12904956	Edlmmq10_m	extensor digitorum longus muscle mass QTL 10 (mouse)					12	19739833	53739833	Mouse
1302172	Skts5_m	skin tumor susceptibility 5 (mouse)			Not determined		12	22148866	56149016	Mouse

Markers in Region

MARC_15737-15738:1017933538:1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	12	24,584,871 - 24,586,097	UniSTS	GRCm38
MGSCv37	12	25,269,736 - 25,270,962	UniSTS	GRCm37
Celera	12	26,046,741 - 26,047,966	UniSTS
Cytogenetic Map	12	A1.3	UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001161406	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_145890	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006515016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006515017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_030246622	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_030246623	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC125067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF390547	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF411211	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF411212	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK076307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK161048	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK167035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC013080	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC037233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DV553123	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000020985 ⟹ ENSMUSP00000020985

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	24,630,748 - 24,667,390 (+)	Ensembl
GRCm38.p6 Ensembl	12	24,580,749 - 24,617,391 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000085553 ⟹ ENSMUSP00000082689

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	24,622,282 - 24,667,387 (+)	Ensembl
GRCm38.p6 Ensembl	12	24,572,283 - 24,617,388 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000221426

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	24,622,286 - 24,646,896 (+)	Ensembl
GRCm38.p6 Ensembl	12	24,572,287 - 24,596,897 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000223442

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	24,630,718 - 24,667,390 (+)	Ensembl
GRCm38.p6 Ensembl	12	24,580,719 - 24,617,391 (+)	Ensembl

RefSeq Acc Id:

NM_001161406 ⟹ NP_001154878

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	24,622,286 - 24,667,390 (+)	NCBI
GRCm38	12	24,572,287 - 24,617,391 (+)	NCBI
MGSCv37	12	25,257,152 - 25,302,256 (+)	RGD
Celera	12	26,034,221 - 26,079,315 (+)	RGD
cM Map	12		ENTREZGENE

Sequence:

show sequence

CGAGAAAAGCGAACCCAACCCGTCGGGGCCGCCGCTCCGGACCCACCGCCTGCCGCCGCGCGCC
GCCCGCCGCCGCCTCCTCCCCCCGGATCGGGTGTACTGTCCCAACCCGAAAGTCCAGTTCTGCG
GCCCGGCAGCGGCGAGCGAGCGCGATGACACAGGAGTACGACAACAAAAGGCCCGTGCTGGTAC
TTCAGAATGAAGCCCTCTACCCACAGCGGCGCTCCTATACCAGTGAGGATGAAGCCTGGAAGTC
GTTCCTGGAAAACCCTCTCACTGCGGCAACCAAAGCGATGATGAGCATCAACGGAGACGAAGAC
AGCGCGGCTGCGCTGGGCCTGCTCTATGACTACTACAAGGTCCCCAGAGAGCGCCGGTCATCAG
CCGTAAAGCCCGAGGGAGAGCACCCAGAGCCAGAGCACAGCAAAAGAAACAGCATACCAAATGT
GACGGAGCAGCCCCTCATTTCTGCTGGAGAAAACAGGGTGCAAGTGCTGAAAAACGTGCCCTTC
AACATCGTCCTCCCCCATAGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCCCG
ATACAACAGTCACTGTCTCCATAGCAACCATGCCTACCCACTCCATCAAGACAGAAATCCAGCC
GCACGGCTTTGCTGTGGGAATCCCACCAGCCGTGTACCACTCTGAGCCCACCGAACGTGTGGTG
GTTTTTGACCGGAGCCTCAGCACTGATCAGTTCAGCTCTGGCACTCAGCCCCCCAATGCTCAGC
GGAGGACTCCAGACTCCACCTTCTCCGAGACCTTCAAGGAGGGCGTTCAGGAGGTTTTCTTCCC
CTCGGAACTCAGCCTTCGGATGCCGGGCATGAATTCAGAGGACTATGTCTTTGACAATGTTTCT
GGGAACAACTTTGAGTATACCCTGGAAGCCTCCAAGTCACTGCGGCAGAAGCAAGGGGACAGCA
CTATGACATACCTGAATAAAGGCCAGTTCTATCCTGTCACCTTAAAGGAAGGAAGCAGCAATGA
AGGGATTCACCACCCTATCAGCAAAGTTCGAAGTGTGATCATGGTGGTTTTTGCTGAAGACAAA
AGCAGAGAAGACCAGCTGAGACACTGGAAGTACTGGCACTCCCGTCAGCACACGGCCAAACAGA
GGTGCATTGACATTGCTGACTACAAAGAAAGCTTCAACACTATCAGCAACATTGAGGAGATAGC
TTATAACGCCATTTCCTTCACGTGGGACATCAATGATGAGGCAAAGGTCTTCATCTCTGTGAAC
TGCTTGAGCACAGATTTCTCTTCTCAGAAGGGTGTGAAGGGCTTGCCACTCAACATTCAAATCG
ACACATACAGCTATAACAACCGCAGCAACAAGCCGGTTCACCGGGCCTACTGCCAGATAAAGGT
CTTCTGCGACAAGGGAGCTGAAAGGAAAATTCGGGATGAAGAACGAAAACAGAGCAAGAGAAAA
GTGTCTGACGTTAAAGTGCAGCTGCTTCCCTCGCACAAACGGACAGACATCACAGTGTTCAAGC
CCTTCCTGGACCTCGACACTCAGCCTGTCCTCTTCATTCCGGACGTGCATTTTACCAACCTGCA
GCGGGGCAGTCATGTTCTTTCCCTCCCCTCTGAAGAACTGGAAGGTGAAGGCTCTGTCTTGAAA
AGAGGGCCATTCGGAACCGAAGATGACTTTGGAGTTCCTCCTCCTGCTAAGCTGACTCGGACAG
AAGAACCCAAGAGAGTGCTGCTCTATGTCCGAAAGGAATCAGAAGAAGTCTTCGACGCCCTGAT
GCTCAAGACGCCGTCTTTGAAGGGCCTGATGGAGGCAATTTCAGACAAGTATGATGTCCCCCAT
GACAAGATTGGGAAAATATTTAAGAAGTGCAAAAAAGGGATCCTCGTGAACATGGACGACAACA
TTGTGAAGCACTACTCCAATGAGGACACCTTCCAGCTGCAGATAGAGGAAGCCGGCGGCTCGTA
CAAGCTCACCCTGACAGAGATTTAAAGGGGCAGGGGTGGGGGGCGCTCGGCTCCCAGGCGTGGG
AATTCAGTGAAAGTGTTCCAGCTGAGAAGCCCAGGCACCTACCCTGCAGAACCTTAAATATCAG
GGAAGGAACCTTTCACGTAGGAAATGGCGCTGTGTATACCGTGCTGTGTTGATGTTTTCTTTTG
GATAGAAATCCATGTGTTGTTTTGTTGTTGTTGTTTGAATTTCTGATGTGCTTAGAAAGCGAAG
CATGAGAACTTTGTACCGGATCTAAGAGACCATGGGACCGTTTGGGTTACCTGCTCCACTACCT
GTCAAAGTCTGCCTGTGTCCATAAGAGTGGTGGGCTACTGGCTGGCGAGAGAGGGGAAGGCAGT
AGCTTGTCTTTGAGGCTTTTGTGTTCTCGCCTGACCTCAGTCTAACTCTGACTGCCTTGAGGAG
TGGGCCCAGCCCTCAGCAATAAAGGGCTAAGCCTTCTCCCTCCACCTCTCCTCCAGTGTTTACT
AAATAGGGTGCATTACTGGAACCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGA
TGAAGAACTTGCGTGAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGC
AATATCTTTTTGAAGGTCTGCCTGTAAATGTGTACATATATGTCTGATATAAATATATAATATA
TAAATGCGGTATCTGTGTACAGATAGTGAAGGTGAGCAGGAAGATCTACCTTGAAATCCCTCTT
AGAGAAGAGGTTAAGTTATTATTGATAATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAA
ACAAGCAAGTGTTCCCTAGCATAGCAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTGCG
AATGTTGTCACCGTGTGGGTTTCTGCACCCTGAGTGGAGCTAATGGAAGACTGGACTGCAGCTA
CTATATGAGGTGTGTGTGCAGGTGTCAGCCAGCTGTGCCCATGCAGAGACTCAGCCGTTGTCAT
GAGCCAGCGATACAAACCAAAATGGGCCGATTCTACAAGGCCATGTTTCAGAGCTTCCAAGCAT
CAGCTACCGTGTGTTTGAACTGGAAGGCATTCATGAATTTACATAACTGTGGCAGGGGAATGTT
TTGTGCACACTTAAATATTTAAGAACAAAACGAAACTTTACAATGTAATTTTATAATGAATCCT
GTAACAGAAATACAATTGCGGGTTTCTTTAGGTTCAGGGAACTAGAATAGGTCATTTGTATGAG
TAGGATTGTTAGCGGTATACGTAGGTTAAAAAGTACTCTAATGAAGTATGTGAACAAAATAGCT
GGTTTTCTAAGATACGGGATACGGGTCATATAACAATATTTTCTATTTTGTTTTATGAAATCAG
CTTTACTTGTTTTAATTGTATCATTGAACATGTGTTTTAAACCAAAGGGATTGAATTTTATATG
TCTATTTCACAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_145890 ⟹ NP_665897

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	24,630,718 - 24,667,390 (+)	NCBI
GRCm38	12	24,580,719 - 24,617,391 (+)	NCBI
MGSCv37	12	25,257,152 - 25,302,256 (+)	RGD
Celera	12	26,034,221 - 26,079,315 (+)	RGD
cM Map	12		ENTREZGENE

Sequence:

show sequence

GTTCCTCCATGGGTTCCTTGAGTTCCTGACATGGTTCTCCTTGATGATGAACTGTGTGACCTAA
ACAGCATACCAAATGTGACGGAGCAGCCCCTCATTTCTGCTGGAGAAAACAGGGTGCAAGTGCT
GAAAAACGTGCCCTTCAACATCGTCCTCCCCCATAGCAACCAGCTGGGCATTGATAAGAGAGGC
CATCTGACAGCTCCCGATACAACAGTCACTGTCTCCATAGCAACCATGCCTACCCACTCCATCA
AGACAGAAATCCAGCCGCACGGCTTTGCTGTGGGAATCCCACCAGCCGTGTACCACTCTGAGCC
CACCGAACGTGTGGTGGTTTTTGACCGGAGCCTCAGCACTGATCAGTTCAGCTCTGGCACTCAG
CCCCCCAATGCTCAGCGGAGGACTCCAGACTCCACCTTCTCCGAGACCTTCAAGGAGGGCGTTC
AGGAGGTTTTCTTCCCCTCGGAACTCAGCCTTCGGATGCCGGGCATGAATTCAGAGGACTATGT
CTTTGACAATGTTTCTGGGAACAACTTTGAGTATACCCTGGAAGCCTCCAAGTCACTGCGGCAG
AAGCAAGGGGACAGCACTATGACATACCTGAATAAAGGCCAGTTCTATCCTGTCACCTTAAAGG
AAGGAAGCAGCAATGAAGGGATTCACCACCCTATCAGCAAAGTTCGAAGTGTGATCATGGTGGT
TTTTGCTGAAGACAAAAGCAGAGAAGACCAGCTGAGACACTGGAAGTACTGGCACTCCCGTCAG
CACACGGCCAAACAGAGGTGCATTGACATTGCTGACTACAAAGAAAGCTTCAACACTATCAGCA
ACATTGAGGAGATAGCTTATAACGCCATTTCCTTCACGTGGGACATCAATGATGAGGCAAAGGT
CTTCATCTCTGTGAACTGCTTGAGCACAGATTTCTCTTCTCAGAAGGGTGTGAAGGGCTTGCCA
CTCAACATTCAAATCGACACATACAGCTATAACAACCGCAGCAACAAGCCGGTTCACCGGGCCT
ACTGCCAGATAAAGGTCTTCTGCGACAAGGGAGCTGAAAGGAAAATTCGGGATGAAGAACGAAA
ACAGAGCAAGAGAAAAGTGTCTGACGTTAAAGTGCAGCTGCTTCCCTCGCACAAACGGACAGAC
ATCACAGTGTTCAAGCCCTTCCTGGACCTCGACACTCAGCCTGTCCTCTTCATTCCGGACGTGC
ATTTTACCAACCTGCAGCGGGGCAGTCATGTTCTTTCCCTCCCCTCTGAAGAACTGGAAGGTGA
AGGCTCTGTCTTGAAAAGAGGGCCATTCGGAACCGAAGATGACTTTGGAGTTCCTCCTCCTGCT
AAGCTGACTCGGACAGAAGAACCCAAGAGAGTGCTGCTCTATGTCCGAAAGGAATCAGAAGAAG
TCTTCGACGCCCTGATGCTCAAGACGCCGTCTTTGAAGGGCCTGATGGAGGCAATTTCAGACAA
GTATGATGTCCCCCATGACAAGATTGGGAAAATATTTAAGAAGTGCAAAAAAGGGATCCTCGTG
AACATGGACGACAACATTGTGAAGCACTACTCCAATGAGGACACCTTCCAGCTGCAGATAGAGG
AAGCCGGCGGCTCGTACAAGCTCACCCTGACAGAGATTTAAAGGGGCAGGGGTGGGGGGCGCTC
GGCTCCCAGGCGTGGGAATTCAGTGAAAGTGTTCCAGCTGAGAAGCCCAGGCACCTACCCTGCA
GAACCTTAAATATCAGGGAAGGAACCTTTCACGTAGGAAATGGCGCTGTGTATACCGTGCTGTG
TTGATGTTTTCTTTTGGATAGAAATCCATGTGTTGTTTTGTTGTTGTTGTTTGAATTTCTGATG
TGCTTAGAAAGCGAAGCATGAGAACTTTGTACCGGATCTAAGAGACCATGGGACCGTTTGGGTT
ACCTGCTCCACTACCTGTCAAAGTCTGCCTGTGTCCATAAGAGTGGTGGGCTACTGGCTGGCGA
GAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTTCTCGCCTGACCTCAGTCTAACTC
TGACTGCCTTGAGGAGTGGGCCCAGCCCTCAGCAATAAAGGGCTAAGCCTTCTCCCTCCACCTC
TCCTCCAGTGTTTACTAAATAGGGTGCATTACTGGAACCTTCCCGTGCAACTTCCTTGGACATG
TGGACTGCCTTTCTGATGAAGAACTTGCGTGAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTG
CGTTGTATATAAGTGCAATATCTTTTTGAAGGTCTGCCTGTAAATGTGTACATATATGTCTGAT
ATAAATATATAATATATAAATGCGGTATCTGTGTACAGATAGTGAAGGTGAGCAGGAAGATCTA
CCTTGAAATCCCTCTTAGAGAAGAGGTTAAGTTATTATTGATAATGTGGACCAAGCAGGTAGAA
CGCTGTTTTCCCAAAAACAAGCAAGTGTTCCCTAGCATAGCAAAAAGCCATCTCGTGTGGCAGA
GCCATCTGCTCTTGCGAATGTTGTCACCGTGTGGGTTTCTGCACCCTGAGTGGAGCTAATGGAA
GACTGGACTGCAGCTACTATATGAGGTGTGTGTGCAGGTGTCAGCCAGCTGTGCCCATGCAGAG
ACTCAGCCGTTGTCATGAGCCAGCGATACAAACCAAAATGGGCCGATTCTACAAGGCCATGTTT
CAGAGCTTCCAAGCATCAGCTACCGTGTGTTTGAACTGGAAGGCATTCATGAATTTACATAACT
GTGGCAGGGGAATGTTTTGTGCACACTTAAATATTTAAGAACAAAACGAAACTTTACAATGTAA
TTTTATAATGAATCCTGTAACAGAAATACAATTGCGGGTTTCTTTAGGTTCAGGGAACTAGAAT
AGGTCATTTGTATGAGTAGGATTGTTAGCGGTATACGTAGGTTAAAAAGTACTCTAATGAAGTA
TGTGAACAAAATAGCTGGTTTTCTAAGATACGGGATACGGGTCATATAACAATATTTTCTATTT
TGTTTTATGAAATCAGCTTTACTTGTTTTAATTGTATCATTGAACATGTGTTTTAAACCAAAGG
GATTGAATTTTATATGTCTATTTCACAA

hide sequence

RefSeq Acc Id:

XM_006515016 ⟹ XP_006515079

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	24,622,234 - 24,667,390 (+)	NCBI
GRCm38	12	24,572,232 - 24,617,391 (+)	NCBI

Sequence:

show sequence

GAGGCCGAGCCCAGCGCCCAGTGCGCGCAGCCCGCGCCGAGCCGGCTCAGAGCGAGAAAAGCGA
ACCCAACCCGTCGGGGCCGCCGCTCCGGACCCACCGCCTGCCGCCGCGCGCCGCCCGCCGCCGC
CTCCTCCCCCCGGATCGGGTGTACTGTCCCAACCCGAAAGTCCAGTTCTGCGGCCCGGCAGCGG
CGAGCGAGCGCGATGACACAGGAGTACGACAACAAAAGGCCCGTGCTGGTACTTCAGAATGAAG
CCCTCTACCCACAGCGGCGCTCCTATACCAGTGAGGATGAAGCCTGGAAGTCGTTCCTGGAAAA
CCCTCTCACTGCGGCAACCAAAGCGATGATGAGCATCAACGGAGACGAAGACAGCGCGGCTGCG
CTGGGCCTGCTCTATGACTACTACAAGGTCCCCAGAGAGCGCCGGTCATCAGCCGTAAAGCCCG
AGGGAGAGCACCCAGAGCCAGAGCACAGCAAAAGCATACCAAATGTGACGGAGCAGCCCCTCAT
TTCTGCTGGAGAAAACAGGGTGCAAGTGCTGAAAAACGTGCCCTTCAACATCGTCCTCCCCCAT
AGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCCCGATACAACAGTCACTGTCT
CCATAGCAACCATGCCTACCCACTCCATCAAGACAGAAATCCAGCCGCACGGCTTTGCTGTGGG
AATCCCACCAGCCGTGTACCACTCTGAGCCCACCGAACGTGTGGTGGTTTTTGACCGGAGCCTC
AGCACTGATCAGTTCAGCTCTGGCACTCAGCCCCCCAATGCTCAGCGGAGGACTCCAGACTCCA
CCTTCTCCGAGACCTTCAAGGAGGGCGTTCAGGAGGTTTTCTTCCCCTCGGAACTCAGCCTTCG
GATGCCGGGCATGAATTCAGAGGACTATGTCTTTGACAATGTTTCTGGGAACAACTTTGAGTAT
ACCCTGGAAGCCTCCAAGTCACTGCGGCAGAAGCAAGGGGACAGCACTATGACATACCTGAATA
AAGGCCAGTTCTATCCTGTCACCTTAAAGGAAGGAAGCAGCAATGAAGGGATTCACCACCCTAT
CAGCAAAGTTCGAAGTGTGATCATGGTGGTTTTTGCTGAAGACAAAAGCAGAGAAGACCAGCTG
AGACACTGGAAGTACTGGCACTCCCGTCAGCACACGGCCAAACAGAGGTGCATTGACATTGCTG
ACTACAAAGAAAGCTTCAACACTATCAGCAACATTGAGGAGATAGCTTATAACGCCATTTCCTT
CACGTGGGACATCAATGATGAGGCAAAGGTCTTCATCTCTGTGAACTGCTTGAGCACAGATTTC
TCTTCTCAGAAGGGTGTGAAGGGCTTGCCACTCAACATTCAAATCGACACATACAGCTATAACA
ACCGCAGCAACAAGCCGGTTCACCGGGCCTACTGCCAGATAAAGGTCTTCTGCGACAAGGGAGC
TGAAAGGAAAATTCGGGATGAAGAACGAAAACAGAGCAAGAGAAAAGTGTCTGACGTTAAAGTG
CAGCTGCTTCCCTCGCACAAACGGACAGACATCACAGTGTTCAAGCCCTTCCTGGACCTCGACA
CTCAGCCTGTCCTCTTCATTCCGGACGTGCATTTTACCAACCTGCAGCGGGGCAGTCATGTTCT
TTCCCTCCCCTCTGAAGAACTGGAAGGTGAAGGCTCTGTCTTGAAAAGAGGGCCATTCGGAACC
GAAGATGACTTTGGAGTTCCTCCTCCTGCTAAGCTGACTCGGACAGAAGAACCCAAGAGAGTGC
TGCTCTATGTCCGAAAGGAATCAGAAGAAGTCTTCGACGCCCTGATGCTCAAGACGCCGTCTTT
GAAGGGCCTGATGGAGGCAATTTCAGACAAGTATGATGTCCCCCATGACAAGATTGGGAAAATA
TTTAAGAAGTGCAAAAAAGGGATCCTCGTGAACATGGACGACAACATTGTGAAGCACTACTCCA
ATGAGGACACCTTCCAGCTGCAGATAGAGGAAGCCGGCGGCTCGTACAAGCTCACCCTGACAGA
GATTTAAAGGGGCAGGGGTGGGGGGCGCTCGGCTCCCAGGCGTGGGAATTCAGTGAAAGTGTTC
CAGCTGAGAAGCCCAGGCACCTACCCTGCAGAACCTTAAATATCAGGGAAGGAACCTTTCACGT
AGGAAATGGCGCTGTGTATACCGTGCTGTGTTGATGTTTTCTTTTGGATAGAAATCCATGTGTT
GTTTTGTTGTTGTTGTTTGAATTTCTGATGTGCTTAGAAAGCGAAGCATGAGAACTTTGTACCG
GATCTAAGAGACCATGGGACCGTTTGGGTTACCTGCTCCACTACCTGTCAAAGTCTGCCTGTGT
CCATAAGAGTGGTGGGCTACTGGCTGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTT
TTGTGTTCTCGCCTGACCTCAGTCTAACTCTGACTGCCTTGAGGAGTGGGCCCAGCCCTCAGCA
ATAAAGGGCTAAGCCTTCTCCCTCCACCTCTCCTCCAGTGTTTACTAAATAGGGTGCATTACTG
GAACCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTGCGTGAGT
GACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCAATATCTTTTTGAAGGTC
TGCCTGTAAATGTGTACATATATGTCTGATATAAATATATAATATATAAATGCGGTATCTGTGT
ACAGATAGTGAAGGTGAGCAGGAAGATCTACCTTGAAATCCCTCTTAGAGAAGAGGTTAAGTTA
TTATTGATAATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGTGTTCCCTA
GCATAGCAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTGCGAATGTTGTCACCGTGTGG
GTTTCTGCACCCTGAGTGGAGCTAATGGAAGACTGGACTGCAGCTACTATATGAGGTGTGTGTG
CAGGTGTCAGCCAGCTGTGCCCATGCAGAGACTCAGCCGTTGTCATGAGCCAGCGATACAAACC
AAAATGGGCCGATTCTACAAGGCCATGTTTCAGAGCTTCCAAGCATCAGCTACCGTGTGTTTGA
ACTGGAAGGCATTCATGAATTTACATAACTGTGGCAGGGGAATGTTTTGTGCACACTTAAATAT
TTAAGAACAAAACGAAACTTTACAATGTAATTTTATAATGAATCCTGTAACAGAAATACAATTG
CGGGTTTCTTTAGGTTCAGGGAACTAGAATAGGTCATTTGTATGAGTAGGATTGTTAGCGGTAT
ACGTAGGTTAAAAAGTACTCTAATGAAGTATGTGAACAAAATAGCTGGTTTTCTAAGATACGGG
ATACGGGTCATATAACAATATTTTCTATTTTGTTTTATGAAATCAGCTTTACTTGTTTTAATTG
TATCATTGAACATGTGTTTTAAACCAAAGGGATTGAATTTTATATGTCTATTTCACAA

hide sequence

RefSeq Acc Id:

XM_006515017 ⟹ XP_006515080

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	24,622,578 - 24,667,390 (+)	NCBI
GRCm38	12	24,572,582 - 24,617,391 (+)	NCBI

Sequence:

show sequence

GGGGGACACTCGGCCTGTCGTCTAAGGGCTCCCGGGCTCCCGGGCCCCGCGCTCATGGACCGGT
GGGGACGGGTGGACCCTGGGCAGCCTCCTGTCACCTGCGGAGCTGCCGGAGCGAGAGATCTAGG
GGAAGGTTGAAGTGTCCGCTGCCCGCGCGTTTTCTTCACTCCGGCTGCTGTGTGAGAAATCTGC
TGTGGGTGTTCTTGGGCCCTTGCATCACCGATGCAAAAGGCCCGTGCTGGTACTTCAGAATGAA
GCCCTCTACCCACAGCGGCGCTCCTATACCAGTGAGGATGAAGCCTGGAAGTCGTTCCTGGAAA
ACCCTCTCACTGCGGCAACCAAAGCGATGATGAGCATCAACGGAGACGAAGACAGCGCGGCTGC
GCTGGGCCTGCTCTATGACTACTACAAGGTCCCCAGAGAGCGCCGGTCATCAGCCGTAAAGCCC
GAGGGAGAGCACCCAGAGCCAGAGCACAGCAAAAGAAACAGCATACCAAATGTGACGGAGCAGC
CCCTCATTTCTGCTGGAGAAAACAGGGTGCAAGTGCTGAAAAACGTGCCCTTCAACATCGTCCT
CCCCCATAGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCCCGATACAACAGTC
ACTGTCTCCATAGCAACCATGCCTACCCACTCCATCAAGACAGAAATCCAGCCGCACGGCTTTG
CTGTGGGAATCCCACCAGCCGTGTACCACTCTGAGCCCACCGAACGTGTGGTGGTTTTTGACCG
GAGCCTCAGCACTGATCAGTTCAGCTCTGGCACTCAGCCCCCCAATGCTCAGCGGAGGACTCCA
GACTCCACCTTCTCCGAGACCTTCAAGGAGGGCGTTCAGGAGGTTTTCTTCCCCTCGGAACTCA
GCCTTCGGATGCCGGGCATGAATTCAGAGGACTATGTCTTTGACAATGTTTCTGGGAACAACTT
TGAGTATACCCTGGAAGCCTCCAAGTCACTGCGGCAGAAGCAAGGGGACAGCACTATGACATAC
CTGAATAAAGGCCAGTTCTATCCTGTCACCTTAAAGGAAGGAAGCAGCAATGAAGGGATTCACC
ACCCTATCAGCAAAGTTCGAAGTGTGATCATGGTGGTTTTTGCTGAAGACAAAAGCAGAGAAGA
CCAGCTGAGACACTGGAAGTACTGGCACTCCCGTCAGCACACGGCCAAACAGAGGTGCATTGAC
ATTGCTGACTACAAAGAAAGCTTCAACACTATCAGCAACATTGAGGAGATAGCTTATAACGCCA
TTTCCTTCACGTGGGACATCAATGATGAGGCAAAGGTCTTCATCTCTGTGAACTGCTTGAGCAC
AGATTTCTCTTCTCAGAAGGGTGTGAAGGGCTTGCCACTCAACATTCAAATCGACACATACAGC
TATAACAACCGCAGCAACAAGCCGGTTCACCGGGCCTACTGCCAGATAAAGGTCTTCTGCGACA
AGGGAGCTGAAAGGAAAATTCGGGATGAAGAACGAAAACAGAGCAAGAGAAAAGTGTCTGACGT
TAAAGTGCAGCTGCTTCCCTCGCACAAACGGACAGACATCACAGTGTTCAAGCCCTTCCTGGAC
CTCGACACTCAGCCTGTCCTCTTCATTCCGGACGTGCATTTTACCAACCTGCAGCGGGGCAGTC
ATGTTCTTTCCCTCCCCTCTGAAGAACTGGAAGGTGAAGGCTCTGTCTTGAAAAGAGGGCCATT
CGGAACCGAAGATGACTTTGGAGTTCCTCCTCCTGCTAAGCTGACTCGGACAGAAGAACCCAAG
AGAGTGCTGCTCTATGTCCGAAAGGAATCAGAAGAAGTCTTCGACGCCCTGATGCTCAAGACGC
CGTCTTTGAAGGGCCTGATGGAGGCAATTTCAGACAAGTATGATGTCCCCCATGACAAGATTGG
GAAAATATTTAAGAAGTGCAAAAAAGGGATCCTCGTGAACATGGACGACAACATTGTGAAGCAC
TACTCCAATGAGGACACCTTCCAGCTGCAGATAGAGGAAGCCGGCGGCTCGTACAAGCTCACCC
TGACAGAGATTTAAAGGGGCAGGGGTGGGGGGCGCTCGGCTCCCAGGCGTGGGAATTCAGTGAA
AGTGTTCCAGCTGAGAAGCCCAGGCACCTACCCTGCAGAACCTTAAATATCAGGGAAGGAACCT
TTCACGTAGGAAATGGCGCTGTGTATACCGTGCTGTGTTGATGTTTTCTTTTGGATAGAAATCC
ATGTGTTGTTTTGTTGTTGTTGTTTGAATTTCTGATGTGCTTAGAAAGCGAAGCATGAGAACTT
TGTACCGGATCTAAGAGACCATGGGACCGTTTGGGTTACCTGCTCCACTACCTGTCAAAGTCTG
CCTGTGTCCATAAGAGTGGTGGGCTACTGGCTGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTT
GAGGCTTTTGTGTTCTCGCCTGACCTCAGTCTAACTCTGACTGCCTTGAGGAGTGGGCCCAGCC
CTCAGCAATAAAGGGCTAAGCCTTCTCCCTCCACCTCTCCTCCAGTGTTTACTAAATAGGGTGC
ATTACTGGAACCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTG
CGTGAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCAATATCTTTTT
GAAGGTCTGCCTGTAAATGTGTACATATATGTCTGATATAAATATATAATATATAAATGCGGTA
TCTGTGTACAGATAGTGAAGGTGAGCAGGAAGATCTACCTTGAAATCCCTCTTAGAGAAGAGGT
TAAGTTATTATTGATAATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGTG
TTCCCTAGCATAGCAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTGCGAATGTTGTCAC
CGTGTGGGTTTCTGCACCCTGAGTGGAGCTAATGGAAGACTGGACTGCAGCTACTATATGAGGT
GTGTGTGCAGGTGTCAGCCAGCTGTGCCCATGCAGAGACTCAGCCGTTGTCATGAGCCAGCGAT
ACAAACCAAAATGGGCCGATTCTACAAGGCCATGTTTCAGAGCTTCCAAGCATCAGCTACCGTG
TGTTTGAACTGGAAGGCATTCATGAATTTACATAACTGTGGCAGGGGAATGTTTTGTGCACACT
TAAATATTTAAGAACAAAACGAAACTTTACAATGTAATTTTATAATGAATCCTGTAACAGAAAT
ACAATTGCGGGTTTCTTTAGGTTCAGGGAACTAGAATAGGTCATTTGTATGAGTAGGATTGTTA
GCGGTATACGTAGGTTAAAAAGTACTCTAATGAAGTATGTGAACAAAATAGCTGGTTTTCTAAG
ATACGGGATACGGGTCATATAACAATATTTTCTATTTTGTTTTATGAAATCAGCTTTACTTGTT
TTAATTGTATCATTGAACATGTGTTTTAAACCAAAGGGATTGAATTTTATATGTCTATTTCACA
A

hide sequence

RefSeq Acc Id:

XM_030246622 ⟹ XP_030102482

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	24,622,235 - 24,667,390 (+)	NCBI
GRCm38	12	24,572,232 - 24,617,391 (+)	NCBI

Sequence:

show sequence

AGGCCGAGCCCAGCGCCCAGTGCGCGCAGCCCGCGCCGAGCCGGCTCAGAGCGAGAAAAGCGAA
CCCAACCCGTCGGGGCCGCCGCTCCGGACCCACCGCCTGCCGCCGCGCGCCGCCCGCCGCCGCC
TCCTCCCCCCGGATCGGGTGTACTGTCCCAACCCGAAAGTCCAGTTCTGCGGCCCGGCAGCGGC
GAGCGAGCGCGATGACACAGGAGTACGACAACAAAAGGCCCGTGCTGGTACTTCAGAATGAAGC
CCTCTACCCACAGCGGCGCTCCTATACCAGTGAGGATGAAGCCTGGAAGTCGTTCCTGGAAAAC
CCTCTCACTGCGGCAACCAAAGCGATGATGAGCATCAACGGAGACGAAGACAGCGCGGCTGCGC
TGGGCCTGCTCTATGACTACTACAAGGTCCCCAGAGAGCGCCGGTCATCAGCCGTAAAGCCCGA
GGGAGAGCACCCAGAGCCAGAGCACAGCAAAAGAAACAGCATACCAAATGTGACGGAGCAGCCC
CTCATTTCTGCTGGAGAAAACAGGGTGCAAGTGCTGAAAAACGTGCCCTTCAACATCGTCCTCC
CCCATAGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCCCGATACAACAGTCAC
TGTCTCCATAGCAACCATGCCTACCCACTCCATCAAGACAGAAATCCAGCCGCACGGCTTTGCT
GTGGGAATCCCACCAGCCGTGTACCACTCTGAGCCCACCGAACGTGTGGTGGTTTTTGACCGGA
GCCTCAGCACTGATCAGTTCAGCTCTGGCACTCAGCCCCCCAATGCTCAGCGGAGGACTCCAGA
CTCCACCTTCTCCGAGACCTTCAAGGAGGGCGTTCAGGAGGAACAACTTTGAGTATACCCTGGA
AGCCTCCAAGTCACTGCGGCAGAAGCAAGGGGACAGCACTATGACATACCTGAATAAAGGCCAG
TTCTATCCTGTCACCTTAAAGGAAGGAAGCAGCAATGAAGGGATTCACCACCCTATCAGCAAAG
TTCGAAGTGTGATCATGGTGGTTTTTGCTGAAGACAAAAGCAGAGAAGACCAGCTGAGACACTG
GAAGTACTGGCACTCCCGTCAGCACACGGCCAAACAGAGGTGCATTGACATTGCTGACTACAAA
GAAAGCTTCAACACTATCAGCAACATTGAGGAGATAGCTTATAACGCCATTTCCTTCACGTGGG
ACATCAATGATGAGGCAAAGGTCTTCATCTCTGTGAACTGCTTGAGCACAGATTTCTCTTCTCA
GAAGGGTGTGAAGGGCTTGCCACTCAACATTCAAATCGACACATACAGCTATAACAACCGCAGC
AACAAGCCGGTTCACCGGGCCTACTGCCAGATAAAGGTCTTCTGCGACAAGGGAGCTGAAAGGA
AAATTCGGGATGAAGAACGAAAACAGAGCAAGAGAAAAGTGTCTGACGTTAAAGTGCAGCTGCT
TCCCTCGCACAAACGGACAGACATCACAGTGTTCAAGCCCTTCCTGGACCTCGACACTCAGCCT
GTCCTCTTCATTCCGGACGTGCATTTTACCAACCTGCAGCGGGGCAGTCATGTTCTTTCCCTCC
CCTCTGAAGAACTGGAAGGTGAAGGCTCTGTCTTGAAAAGAGGGCCATTCGGAACCGAAGATGA
CTTTGGAGTTCCTCCTCCTGCTAAGCTGACTCGGACAGAAGAACCCAAGAGAGTGCTGCTCTAT
GTCCGAAAGGAATCAGAAGAAGTCTTCGACGCCCTGATGCTCAAGACGCCGTCTTTGAAGGGCC
TGATGGAGGCAATTTCAGACAAGTATGATGTCCCCCATGACAAGATTGGGAAAATATTTAAGAA
GTGCAAAAAAGGGATCCTCGTGAACATGGACGACAACATTGTGAAGCACTACTCCAATGAGGAC
ACCTTCCAGCTGCAGATAGAGGAAGCCGGCGGCTCGTACAAGCTCACCCTGACAGAGATTTAAA
GGGGCAGGGGTGGGGGGCGCTCGGCTCCCAGGCGTGGGAATTCAGTGAAAGTGTTCCAGCTGAG
AAGCCCAGGCACCTACCCTGCAGAACCTTAAATATCAGGGAAGGAACCTTTCACGTAGGAAATG
GCGCTGTGTATACCGTGCTGTGTTGATGTTTTCTTTTGGATAGAAATCCATGTGTTGTTTTGTT
GTTGTTGTTTGAATTTCTGATGTGCTTAGAAAGCGAAGCATGAGAACTTTGTACCGGATCTAAG
AGACCATGGGACCGTTTGGGTTACCTGCTCCACTACCTGTCAAAGTCTGCCTGTGTCCATAAGA
GTGGTGGGCTACTGGCTGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTTC
TCGCCTGACCTCAGTCTAACTCTGACTGCCTTGAGGAGTGGGCCCAGCCCTCAGCAATAAAGGG
CTAAGCCTTCTCCCTCCACCTCTCCTCCAGTGTTTACTAAATAGGGTGCATTACTGGAACCTTC
CCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTGCGTGAGTGACAGTGT
GAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCAATATCTTTTTGAAGGTCTGCCTGTA
AATGTGTACATATATGTCTGATATAAATATATAATATATAAATGCGGTATCTGTGTACAGATAG
TGAAGGTGAGCAGGAAGATCTACCTTGAAATCCCTCTTAGAGAAGAGGTTAAGTTATTATTGAT
AATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGTGTTCCCTAGCATAGCA
AAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTGCGAATGTTGTCACCGTGTGGGTTTCTGC
ACCCTGAGTGGAGCTAATGGAAGACTGGACTGCAGCTACTATATGAGGTGTGTGTGCAGGTGTC
AGCCAGCTGTGCCCATGCAGAGACTCAGCCGTTGTCATGAGCCAGCGATACAAACCAAAATGGG
CCGATTCTACAAGGCCATGTTTCAGAGCTTCCAAGCATCAGCTACCGTGTGTTTGAACTGGAAG
GCATTCATGAATTTACATAACTGTGGCAGGGGAATGTTTTGTGCACACTTAAATATTTAAGAAC
AAAACGAAACTTTACAATGTAATTTTATAATGAATCCTGTAACAGAAATACAATTGCGGGTTTC
TTTAGGTTCAGGGAACTAGAATAGGTCATTTGTATGAGTAGGATTGTTAGCGGTATACGTAGGT
TAAAAAGTACTCTAATGAAGTATGTGAACAAAATAGCTGGTTTTCTAAGATACGGGATACGGGT
CATATAACAATATTTTCTATTTTGTTTTATGAAATCAGCTTTACTTGTTTTAATTGTATCATTG
AACATGTGTTTTAAACCAAAGGGATTGAATTTTATATGTCTATTTCACAA

hide sequence

RefSeq Acc Id:

XM_030246623 ⟹ XP_030102483

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	24,622,235 - 24,667,390 (+)	NCBI
GRCm38	12	24,572,232 - 24,617,391 (+)	NCBI

Sequence:

show sequence

AGGCCGAGCCCAGCGCCCAGTGCGCGCAGCCCGCGCCGAGCCGGCTCAGAGCGAGAAAAGCGAA
CCCAACCCGTCGGGGCCGCCGCTCCGGACCCACCGCCTGCCGCCGCGCGCCGCCCGCCGCCGCC
TCCTCCCCCCGGATCGGGTGTACTGTCCCAACCCGAAAGTCCAGTTCTGCGGCCCGGCAGCGGC
GAGCGAGCGCGATGACACAGGAGTACGACAACAAAAGGCCCGTGCTGGTACTTCAGAATGAAGC
CCTCTACCCACAGCGGCGCTCCTATACCAGTGAGGATGAAGCCTGGAAGTCGTTCCTGGAAAAC
CCTCTCACTGCGGCAACCAAAGCGATGATGAGCATCAACGGAGACGAAGACAGCGCGGCTGCGC
TGGGCCTGCTCTATGACTACTACAAGGTCCCCAGAGAGCGCCGGTCATCAGCCGTAAAGCCCGA
GGGAGAGCACCCAGAGCCAGAGCACAGCAAAAGCATACCAAATGTGACGGAGCAGCCCCTCATT
TCTGCTGGAGAAAACAGGGTGCAAGTGCTGAAAAACGTGCCCTTCAACATCGTCCTCCCCCATA
GCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCCCGATACAACAGTCACTGTCTC
CATAGCAACCATGCCTACCCACTCCATCAAGACAGAAATCCAGCCGCACGGCTTTGCTGTGGGA
ATCCCACCAGCCGTGTACCACTCTGAGCCCACCGAACGTGTGGTGGTTTTTGACCGGAGCCTCA
GCACTGATCAGTTCAGCTCTGGCACTCAGCCCCCCAATGCTCAGCGGAGGACTCCAGACTCCAC
CTTCTCCGAGACCTTCAAGGAGGGCGTTCAGGAGGAACAACTTTGAGTATACCCTGGAAGCCTC
CAAGTCACTGCGGCAGAAGCAAGGGGACAGCACTATGACATACCTGAATAAAGGCCAGTTCTAT
CCTGTCACCTTAAAGGAAGGAAGCAGCAATGAAGGGATTCACCACCCTATCAGCAAAGTTCGAA
GTGTGATCATGGTGGTTTTTGCTGAAGACAAAAGCAGAGAAGACCAGCTGAGACACTGGAAGTA
CTGGCACTCCCGTCAGCACACGGCCAAACAGAGGTGCATTGACATTGCTGACTACAAAGAAAGC
TTCAACACTATCAGCAACATTGAGGAGATAGCTTATAACGCCATTTCCTTCACGTGGGACATCA
ATGATGAGGCAAAGGTCTTCATCTCTGTGAACTGCTTGAGCACAGATTTCTCTTCTCAGAAGGG
TGTGAAGGGCTTGCCACTCAACATTCAAATCGACACATACAGCTATAACAACCGCAGCAACAAG
CCGGTTCACCGGGCCTACTGCCAGATAAAGGTCTTCTGCGACAAGGGAGCTGAAAGGAAAATTC
GGGATGAAGAACGAAAACAGAGCAAGAGAAAAGTGTCTGACGTTAAAGTGCAGCTGCTTCCCTC
GCACAAACGGACAGACATCACAGTGTTCAAGCCCTTCCTGGACCTCGACACTCAGCCTGTCCTC
TTCATTCCGGACGTGCATTTTACCAACCTGCAGCGGGGCAGTCATGTTCTTTCCCTCCCCTCTG
AAGAACTGGAAGGTGAAGGCTCTGTCTTGAAAAGAGGGCCATTCGGAACCGAAGATGACTTTGG
AGTTCCTCCTCCTGCTAAGCTGACTCGGACAGAAGAACCCAAGAGAGTGCTGCTCTATGTCCGA
AAGGAATCAGAAGAAGTCTTCGACGCCCTGATGCTCAAGACGCCGTCTTTGAAGGGCCTGATGG
AGGCAATTTCAGACAAGTATGATGTCCCCCATGACAAGATTGGGAAAATATTTAAGAAGTGCAA
AAAAGGGATCCTCGTGAACATGGACGACAACATTGTGAAGCACTACTCCAATGAGGACACCTTC
CAGCTGCAGATAGAGGAAGCCGGCGGCTCGTACAAGCTCACCCTGACAGAGATTTAAAGGGGCA
GGGGTGGGGGGCGCTCGGCTCCCAGGCGTGGGAATTCAGTGAAAGTGTTCCAGCTGAGAAGCCC
AGGCACCTACCCTGCAGAACCTTAAATATCAGGGAAGGAACCTTTCACGTAGGAAATGGCGCTG
TGTATACCGTGCTGTGTTGATGTTTTCTTTTGGATAGAAATCCATGTGTTGTTTTGTTGTTGTT
GTTTGAATTTCTGATGTGCTTAGAAAGCGAAGCATGAGAACTTTGTACCGGATCTAAGAGACCA
TGGGACCGTTTGGGTTACCTGCTCCACTACCTGTCAAAGTCTGCCTGTGTCCATAAGAGTGGTG
GGCTACTGGCTGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTTCTCGCCT
GACCTCAGTCTAACTCTGACTGCCTTGAGGAGTGGGCCCAGCCCTCAGCAATAAAGGGCTAAGC
CTTCTCCCTCCACCTCTCCTCCAGTGTTTACTAAATAGGGTGCATTACTGGAACCTTCCCGTGC
AACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTGCGTGAGTGACAGTGTGAAGTT
AGCTCTGTTAAAGCTGCGTTGTATATAAGTGCAATATCTTTTTGAAGGTCTGCCTGTAAATGTG
TACATATATGTCTGATATAAATATATAATATATAAATGCGGTATCTGTGTACAGATAGTGAAGG
TGAGCAGGAAGATCTACCTTGAAATCCCTCTTAGAGAAGAGGTTAAGTTATTATTGATAATGTG
GACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGTGTTCCCTAGCATAGCAAAAAGC
CATCTCGTGTGGCAGAGCCATCTGCTCTTGCGAATGTTGTCACCGTGTGGGTTTCTGCACCCTG
AGTGGAGCTAATGGAAGACTGGACTGCAGCTACTATATGAGGTGTGTGTGCAGGTGTCAGCCAG
CTGTGCCCATGCAGAGACTCAGCCGTTGTCATGAGCCAGCGATACAAACCAAAATGGGCCGATT
CTACAAGGCCATGTTTCAGAGCTTCCAAGCATCAGCTACCGTGTGTTTGAACTGGAAGGCATTC
ATGAATTTACATAACTGTGGCAGGGGAATGTTTTGTGCACACTTAAATATTTAAGAACAAAACG
AAACTTTACAATGTAATTTTATAATGAATCCTGTAACAGAAATACAATTGCGGGTTTCTTTAGG
TTCAGGGAACTAGAATAGGTCATTTGTATGAGTAGGATTGTTAGCGGTATACGTAGGTTAAAAA
GTACTCTAATGAAGTATGTGAACAAAATAGCTGGTTTTCTAAGATACGGGATACGGGTCATATA
ACAATATTTTCTATTTTGTTTTATGAAATCAGCTTTACTTGTTTTAATTGTATCATTGAACATG
TGTTTTAAACCAAAGGGATTGAATTTTATATGTCTATTTCACAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001154878	(Get FASTA)	NCBI Sequence Viewer
	NP_665897	(Get FASTA)	NCBI Sequence Viewer
	XP_006515079	(Get FASTA)	NCBI Sequence Viewer
	XP_006515080	(Get FASTA)	NCBI Sequence Viewer
	XP_030102482	(Get FASTA)	NCBI Sequence Viewer
	XP_030102483	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH13080	(Get FASTA)	NCBI Sequence Viewer
	AAH37233	(Get FASTA)	NCBI Sequence Viewer
	AAM22617	(Get FASTA)	NCBI Sequence Viewer
	AAM22618	(Get FASTA)	NCBI Sequence Viewer
	BAE36170	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000020985
	ENSMUSP00000020985.9
	ENSMUSP00000082689
	ENSMUSP00000082689.6
GenBank Protein	Q921D9	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_665897 ⟸ NM_145890
- Peptide Label:	isoform 2
- UniProtKB:	E9QMF0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVLLDDELCDLNSIPNVTEQPLISAGENRVQVLKNVPFNIVLPHSNQLGIDKRGHLTAPDTTVT VSIATMPTHSIKTEIQPHGFAVGIPPAVYHSEPTERVVVFDRSLSTDQFSSGTQPPNAQRRTPD STFSETFKEGVQEVFFPSELSLRMPGMNSEDYVFDNVSGNNFEYTLEASKSLRQKQGDSTMTYL NKGQFYPVTLKEGSSNEGIHHPISKVRSVIMVVFAEDKSREDQLRHWKYWHSRQHTAKQRCIDI ADYKESFNTISNIEEIAYNAISFTWDINDEAKVFISVNCLSTDFSSQKGVKGLPLNIQIDTYSY NNRSNKPVHRAYCQIKVFCDKGAERKIRDEERKQSKRKVSDVKVQLLPSHKRTDITVFKPFLDL DTQPVLFIPDVHFTNLQRGSHVLSLPSEELEGEGSVLKRGPFGTEDDFGVPPPAKLTRTEEPKR VLLYVRKESEEVFDALMLKTPSLKGLMEAISDKYDVPHDKIGKIFKKCKKGILVNMDDNIVKHY SNEDTFQLQIEEAGGSYKLTLTEI hide sequence

RefSeq Acc Id:	NP_001154878 ⟸ NM_001161406
- Peptide Label:	isoform 1
- UniProtKB:	Q8K5C1 (UniProtKB/Swiss-Prot), Q921D9 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MTQEYDNKRPVLVLQNEALYPQRRSYTSEDEAWKSFLENPLTAATKAMMSINGDEDSAAALGLL YDYYKVPRERRSSAVKPEGEHPEPEHSKRNSIPNVTEQPLISAGENRVQVLKNVPFNIVLPHSN QLGIDKRGHLTAPDTTVTVSIATMPTHSIKTEIQPHGFAVGIPPAVYHSEPTERVVVFDRSLST DQFSSGTQPPNAQRRTPDSTFSETFKEGVQEVFFPSELSLRMPGMNSEDYVFDNVSGNNFEYTL EASKSLRQKQGDSTMTYLNKGQFYPVTLKEGSSNEGIHHPISKVRSVIMVVFAEDKSREDQLRH WKYWHSRQHTAKQRCIDIADYKESFNTISNIEEIAYNAISFTWDINDEAKVFISVNCLSTDFSS QKGVKGLPLNIQIDTYSYNNRSNKPVHRAYCQIKVFCDKGAERKIRDEERKQSKRKVSDVKVQL LPSHKRTDITVFKPFLDLDTQPVLFIPDVHFTNLQRGSHVLSLPSEELEGEGSVLKRGPFGTED DFGVPPPAKLTRTEEPKRVLLYVRKESEEVFDALMLKTPSLKGLMEAISDKYDVPHDKIGKIFK KCKKGILVNMDDNIVKHYSNEDTFQLQIEEAGGSYKLTLTEI hide sequence

RefSeq Acc Id:

XP_006515079 ⟸ XM_006515016

- Peptide Label:

isoform X1

- Sequence:

show sequence

MTQEYDNKRPVLVLQNEALYPQRRSYTSEDEAWKSFLENPLTAATKAMMSINGDEDSAAALGLL
YDYYKVPRERRSSAVKPEGEHPEPEHSKSIPNVTEQPLISAGENRVQVLKNVPFNIVLPHSNQL
GIDKRGHLTAPDTTVTVSIATMPTHSIKTEIQPHGFAVGIPPAVYHSEPTERVVVFDRSLSTDQ
FSSGTQPPNAQRRTPDSTFSETFKEGVQEVFFPSELSLRMPGMNSEDYVFDNVSGNNFEYTLEA
SKSLRQKQGDSTMTYLNKGQFYPVTLKEGSSNEGIHHPISKVRSVIMVVFAEDKSREDQLRHWK
YWHSRQHTAKQRCIDIADYKESFNTISNIEEIAYNAISFTWDINDEAKVFISVNCLSTDFSSQK
GVKGLPLNIQIDTYSYNNRSNKPVHRAYCQIKVFCDKGAERKIRDEERKQSKRKVSDVKVQLLP
SHKRTDITVFKPFLDLDTQPVLFIPDVHFTNLQRGSHVLSLPSEELEGEGSVLKRGPFGTEDDF
GVPPPAKLTRTEEPKRVLLYVRKESEEVFDALMLKTPSLKGLMEAISDKYDVPHDKIGKIFKKC
KKGILVNMDDNIVKHYSNEDTFQLQIEEAGGSYKLTLTEI

hide sequence

RefSeq Acc Id:

XP_006515080 ⟸ XM_006515017

- Peptide Label:

isoform X2

- Sequence:

show sequence

MMSINGDEDSAAALGLLYDYYKVPRERRSSAVKPEGEHPEPEHSKRNSIPNVTEQPLISAGENR
VQVLKNVPFNIVLPHSNQLGIDKRGHLTAPDTTVTVSIATMPTHSIKTEIQPHGFAVGIPPAVY
HSEPTERVVVFDRSLSTDQFSSGTQPPNAQRRTPDSTFSETFKEGVQEVFFPSELSLRMPGMNS
EDYVFDNVSGNNFEYTLEASKSLRQKQGDSTMTYLNKGQFYPVTLKEGSSNEGIHHPISKVRSV
IMVVFAEDKSREDQLRHWKYWHSRQHTAKQRCIDIADYKESFNTISNIEEIAYNAISFTWDIND
EAKVFISVNCLSTDFSSQKGVKGLPLNIQIDTYSYNNRSNKPVHRAYCQIKVFCDKGAERKIRD
EERKQSKRKVSDVKVQLLPSHKRTDITVFKPFLDLDTQPVLFIPDVHFTNLQRGSHVLSLPSEE
LEGEGSVLKRGPFGTEDDFGVPPPAKLTRTEEPKRVLLYVRKESEEVFDALMLKTPSLKGLMEA
ISDKYDVPHDKIGKIFKKCKKGILVNMDDNIVKHYSNEDTFQLQIEEAGGSYKLTLTEI

hide sequence

RefSeq Acc Id:	XP_030102482 ⟸ XM_030246622
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_030102483 ⟸ XM_030246623
- Peptide Label:	isoform X3

RefSeq Acc Id:

ENSMUSP00000082689 ⟸ ENSMUST00000085553

RefSeq Acc Id:

ENSMUSP00000020985 ⟸ ENSMUST00000020985

Protein Domains

Grh/CP2 DB

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q921D9-F1-model_v2	AlphaFold	Q921D9	1-618	view protein structure

Promoters

RGD ID:

8678010

Promoter ID:

EPDNEW_M17036

Type:

initiation region

Name:

Grhl1_1

Description:

Mus musculus grainyhead like transcription factor 1 , transcriptvariant 2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	12	24,572,283 - 24,572,343	EPDNEW

RGD ID:

6823042

Promoter ID:

MM_KWN:11349

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung

Transcripts:

NM_001161406

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	12	25,256,896 - 25,257,396 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:2182540	AgrOrtholog
Ensembl Genes	ENSMUSG00000020656	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000020985	ENTREZGENE
	ENSMUST00000020985.9	UniProtKB/TrEMBL
	ENSMUST00000085553	ENTREZGENE
	ENSMUST00000085553.13	UniProtKB/Swiss-Prot
InterPro	CP2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TF_CP2-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:195733	UniProtKB/Swiss-Prot
MGD	MGI:2182540	ENTREZGENE
NCBI Gene	195733	ENTREZGENE
PANTHER	GRAINYHEAD-LIKE PROTEIN 1 HOMOLOG	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TRANSCRIPTION FACTOR CP2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	CP2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Grhl1	PhenoGen
PROSITE	GRH_CP2_DB	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	E9QMF0	ENTREZGENE, UniProtKB/TrEMBL
	GRHL1_MOUSE	UniProtKB/Swiss-Prot
	Q8K5C1	ENTREZGENE
	Q921D9	ENTREZGENE
UniProt Secondary	Q8K5C1	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-10-31	Grhl1	grainyhead like transcription factor 1		grainyhead-like 1 (Drosophila)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Mammalian Phenotype