Vmn2r61 (vomeronasal 2, receptor 61) - Rat Genome Database

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Gene: Vmn2r61 (vomeronasal 2, receptor 61) Mus musculus
Analyze
No known orthologs.
Symbol: Vmn2r61
Name: vomeronasal 2, receptor 61
RGD ID: 1617033
MGI Page MGI
Description: Predicted to enable G protein-coupled receptor activity.
Type: protein-coding
RefSeq Status: INFERRED
Previously known as: calcium sensing receptor, related sequence 2; Cas; Casr-rs2; EG637873; G protein-coupled receptor, family C, group 2, member A, related sequence 2; Gprc2; Gprc2a-rs2; vomeronasal receptor Vmn2r61
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39741,909,477 - 41,950,179 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl741,909,477 - 41,950,179 (+)EnsemblGRCm39 Ensembl
GRCm38742,260,053 - 42,300,755 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl742,260,053 - 42,300,755 (+)EnsemblGRCm38mm10GRCm38
MGSCv37749,515,423 - 49,556,125 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36742,037,570 - 42,073,908 (+)NCBIMGSCv36mm8
Celera737,354,290 - 37,394,238 (-)NCBICelera
Cytogenetic Map7B3NCBI
cM Map728.25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:7493018   PMID:9344650   PMID:17382427   PMID:21873635  


Genomics

Variants

.
Variants in Vmn2r61
1382 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:33
Count of miRNA genes:33
Interacting mature miRNAs:33
Transcripts:ENSMUST00000166131
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
1357699Nhdlq6_mnon-HDL QTL 6 (mouse)Not determined7998886743988984Mouse
1558893Spir1_mStreptococcus pneumoniae infection resistance 1 (mouse)Not determined71030579844305936Mouse
10449139Eosn1_meosinophil differential 1 (mouse)71248087746480877Mouse
10449158Eosn3_meosinophil differential 3 (mouse)71248087746480877Mouse
4141566Femwf8_mfemur work to failure 8 (mouse)Not determined1303248547032621Mouse
11522751Cocia17_mcocaine-induced activity, QTL 17 (mouse)71313520447135204Mouse
25314314Sccor1_msynaptonemal complex length to mean MLH1 count ratio 1 (mouse)71333392547349748Mouse
1559016Drsi_mDCC-related Spp1 induction (mouse)Not determined71663729349159331Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
1301622Eae12_msusceptibility to experimental allergic encephalomyelitis 12 (mouse)Not determined71928001553280104Mouse
1301052Bhr6_mbronchial hyperresponsiveness 6 (mouse)Not determined71984225053842367Mouse
12904742Litsq2_mlitter size QTL 2 (mouse)72267388756674033Mouse
1301709Bdt4_mbone density traits 4 (mouse)Not determined72288857256888716Mouse
11354952Pdcc1_mplasmacytoid dentritic cell compartment 1 (mouse)72306653157066531Mouse
1301969Lbw5_mlupus NZB x NZW 5 (mouse)Not determined72684761560851775Mouse
12790989Tgl6_mtriglyceride 6 (mouse)72754054961540549Mouse
4141805Sle19_msystematic lupus erythematosus susceptibility 19 (mouse)Not determined3003248581135653Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1301175Ap7q_malcohol preference 7 QTL (mouse)Not determined73171484565715077Mouse
1300996Aorls2_maortic lesion size 2 (mouse)Not determined73239453266394681Mouse
4142003W3q10_mweight 3 weeks QTL 10 (mouse)Not determined3349772758148965Mouse
4142102Tailq5_mtail length QTL 5 (mouse)Not determined3349772758148965Mouse
4142218W6q17_mweight 6 weeks QTL 17 (mouse)Not determined3349772758148965Mouse
4141909W10q18_mweight 10 weeks QTL 18 (mouse)Not determined3349772758148965Mouse
1357883Epfq5_mepididymal fat pad weight QTL 5 (mouse)Not determined73349772758148965Mouse
1357634Splq7_mspleen weight QTL 7 (mouse)Not determined73349772758148965Mouse
39128210Lwq19_mliver weight QTL 19 (mouse)73349772758148965Mouse
1357469Kidq5_mkidney weight QTL 5 (mouse)Not determined73349772758148965Mouse
1559000Ossc1_mosteosarcoma susceptibility 1 (mouse)Not determined73405302568053223Mouse
38501071Stsl6_mSalmonella typhimurium susceptibility locus 6 (mouse)73419942551149748Mouse
10045622Heal20_mwound healing/regeneration 20 (mouse)Not determined73431688768317043Mouse
1357586Mdmsc3_mmodifier of muscularity 3 (mouse)Not determined73444786968448018Mouse
1301514Rigs1_mradiation induced gastroschisis 1 (mouse)Not determined73628001592394346Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
25314301Vmm3_mvariable multisystem mineralization 3, lung (mouse)73729942572049748Mouse
25314303Vmm4_mvariable multisystem mineralization 4, kidney (mouse)73729942587049208Mouse
1300878Skts1_mskin tumor susceptibility 1 (mouse)Not determined73789138671891582Mouse
10402488Dipa2_mdrug induced psychomotor activation 2 (mouse)Not determined73842154872421684Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined739673887103510010Mouse
11252140Fdr1_mfat response to dietary restriction 1 (mouse)74114882075148965Mouse
4141929Chlq18_mcirculating hormone level QTL 18 (mouse)Not determined74114882075148965Mouse

Markers in Region
Gprc2a-rs1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7B3UniSTS
Cytogenetic Map7B4UniSTS
cM Map7 UniSTS
cM Map720.0UniSTS
cM Map4 UniSTS
Gprc2a-rs4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17A3.2UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map7B3UniSTS
cM Map720.0UniSTS
cM MapUN UniSTS
cM Map7 UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000166131   ⟹   ENSMUSP00000129576
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl741,909,477 - 41,950,179 (+)Ensembl
GRCm38.p6 Ensembl742,260,053 - 42,300,755 (+)Ensembl
RefSeq Acc Id: NM_001105058   ⟹   NP_001098528
RefSeq Status: INFERRED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39741,909,477 - 41,950,179 (+)NCBI
GRCm38742,260,053 - 42,300,755 (+)ENTREZGENE
MGSCv37749,515,423 - 49,556,125 (+)RGD
Celera737,354,290 - 37,394,238 (-)RGD
cM Map7 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001098528 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB83975 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000129576
  ENSMUSP00000129576.2
Reference Protein Sequences
RefSeq Acc Id: NP_001098528   ⟸   NM_001105058
- Peptide Label: precursor
- UniProtKB: L7N2B8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000129576   ⟸   ENSMUST00000166131
Protein Domains
G-protein coupled receptors family 3 profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-L7N2B8-F1-model_v2 AlphaFold L7N2B8 1-865 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1351347 AgrOrtholog
Ensembl Genes ENSMUSG00000090967 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000166131 ENTREZGENE
  ENSMUST00000166131.2 UniProtKB/TrEMBL
Gene3D-CATH 2.10.50.30 UniProtKB/TrEMBL
  3.40.50.2300 UniProtKB/TrEMBL
InterPro ANF_lig-bd_rcpt UniProtKB/TrEMBL
  GPCR_3 UniProtKB/TrEMBL
  GPCR_3_9-Cys_dom UniProtKB/TrEMBL
  GPCR_3_9-Cys_sf UniProtKB/TrEMBL
  GPCR_3_C UniProtKB/TrEMBL
  GPCR_3_Ca_sens_rcpt-rel UniProtKB/TrEMBL
  GPCR_3_vmron_rcpt_2 UniProtKB/TrEMBL
  Peripla_BP_I UniProtKB/TrEMBL
KEGG Report mmu:637873 UniProtKB/TrEMBL
MGD MGI:1351347 ENTREZGENE
NCBI Gene 637873 ENTREZGENE
PANTHER PTHR24061 UniProtKB/TrEMBL
  VOMERONASAL 2, RECEPTOR 57-RELATED UniProtKB/TrEMBL
Pfam 7tm_3 UniProtKB/TrEMBL
  ANF_receptor UniProtKB/TrEMBL
  NCD3G UniProtKB/TrEMBL
PhenoGen Vmn2r61 PhenoGen
PRINTS GPCRMGR UniProtKB/TrEMBL
  VOMERONASL2R UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F3_4 UniProtKB/TrEMBL
Superfamily-SCOP SSF53822 UniProtKB/TrEMBL
UniProt L7N2B8 ENTREZGENE, UniProtKB/TrEMBL