Obi1 (ORC ubiquitin ligase 1) - Rat Genome Database

Name: Obi1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Obi1 (ORC ubiquitin ligase 1) Mus musculus

Analyze

Symbol:

Obi1

Name:

ORC ubiquitin ligase 1

RGD ID:

1616736

MGI Page

MGI

Description:

Predicted to enable chromatin binding activity and ubiquitin-protein transferase activity. Acts upstream of or within positive regulation of mRNA splicing, via spliceosome. Predicted to be located in chromosome. Predicted to be part of chromatin. Orthologous to human OBI1 (ORC ubiquitin ligase 1).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

2610206B13Rik; 2810449K13Rik; AI451544; MGC35679; Obl1; riken cdna 2610206b13 gene; ring finger protein 219; Rnf2; Rnf219

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	OBI1 (ORC ubiquitin ligase 1)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Rattus norvegicus (Norway rat):	Obi1 (ORC ubiquitin ligase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Obi1 (ORC ubiquitin ligase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	OBI1 (ORC ubiquitin ligase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	OBI1 (ORC ubiquitin ligase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Obi1 (ORC ubiquitin ligase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	OBI1 (ORC ubiquitin ligase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	OBI1 (ORC ubiquitin ligase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Obi1 (ORC ubiquitin ligase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	OBI1 (ORC ubiquitin ligase 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Rattus norvegicus (Norway rat):	Obi1 (ORC ubiquitin ligase 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rnf219 (ring finger protein 219)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Xenopus tropicalis (tropical clawed frog):	obi1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	104,714,970 - 104,760,148 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	104,714,972 - 104,760,081 (-)	Ensembl		GRCm39 Ensembl
GRCm38	14	104,477,534 - 104,522,712 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	104,477,536 - 104,522,645 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	104,876,751 - 104,921,883 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	103,363,213 - 103,408,345 (-)	NCBI		MGSCv36	mm8
Celera	14	103,091,780 - 103,136,907 (-)	NCBI		Celera
Cytogenetic Map	14	E2.3	NCBI
cM Map	14	54.24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

chromosome 13q14 deletion syndrome (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,2',4,4',5,5'-hexachlorobiphenyl (EXP)

2,2',5,5'-tetrachlorobiphenyl (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,3,7,8-Tetrachlorodibenzofuran (ISO)

2-methylcholine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

acrylamide (EXP)

aflatoxin B1 (ISO)

aflatoxin M1 (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (EXP,ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (ISO)

caffeine (ISO)

chlorpyrifos (EXP)

cisplatin (ISO)

copper(II) sulfate (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

disodium selenite (ISO)

doxorubicin (ISO)

formaldehyde (ISO)

FR900359 (ISO)

fulvestrant (ISO)

gold atom (ISO)

gold(0) (ISO)

hexadecanoic acid (ISO)

hydrogen peroxide (ISO)

indometacin (ISO)

PCB138 (EXP)

pirinixic acid (ISO)

resveratrol (ISO)

temozolomide (ISO)

testosterone (ISO)

thimerosal (ISO)

thioacetamide (ISO)

topotecan (ISO)

triphenyl phosphate (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of mRNA splicing, via spliceosome (IMP)

protein autoubiquitination (ISO)

protein monoubiquitination (ISO)

regulation of DNA replication (ISO)

Cellular Component

chromatin (ISO)

chromosome (IEA)

Molecular Function

chromatin binding (ISO)

metal ion binding (IEA)

protein binding (ISO)

transferase activity (IEA)

ubiquitin-protein transferase activity (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851	PMID:11812828	PMID:12160731	PMID:12466851	PMID:12477932	PMID:12520002	PMID:14610273	PMID:14691545
PMID:15033168	PMID:15489334	PMID:15952741	PMID:16141072	PMID:16141073	PMID:16919269	PMID:21677750	PMID:23636947	PMID:32220064	PMID:32554809	PMID:33104214

Genomics

Comparative Map Data

Obi1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	104,714,970 - 104,760,148 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	104,714,972 - 104,760,081 (-)	Ensembl		GRCm39 Ensembl
GRCm38	14	104,477,534 - 104,522,712 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	104,477,536 - 104,522,645 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	104,876,751 - 104,921,883 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	103,363,213 - 103,408,345 (-)	NCBI		MGSCv36	mm8
Celera	14	103,091,780 - 103,136,907 (-)	NCBI		Celera
Cytogenetic Map	14	E2.3	NCBI
cM Map	14	54.24	NCBI

OBI1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	13	78,614,289 - 78,659,155 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	13	78,614,289 - 78,659,155 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	13	79,188,424 - 79,233,290 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	13	78,086,422 - 78,131,315 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	13	78,086,430 - 78,131,315	NCBI
Celera	13	60,086,863 - 60,131,755 (-)	NCBI		Celera
Cytogenetic Map	13	q31.1	NCBI
HuRef	13	59,888,745 - 59,933,635 (-)	NCBI		HuRef
CHM1_1	13	79,156,278 - 79,201,134 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	13	77,840,023 - 77,884,889 (-)	NCBI		T2T-CHM13v2.0

Obi1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	87,684,022 - 87,723,342 (-)	NCBI		GRCr8
mRatBN7.2	15	81,269,413 - 81,308,734 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	81,269,416 - 81,308,734 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	15	85,260,403 - 85,299,151 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	86,383,456 - 86,422,210 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	83,311,067 - 83,349,817 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	88,632,089 - 88,670,325 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	88,631,794 - 88,670,349 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	15	92,127,751 - 92,165,948 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	15	88,548,933 - 88,588,816 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	15	80,396,575 - 80,435,845 (-)	NCBI		Celera
Cytogenetic Map	15	q22	NCBI

Obi1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955404	28,758,918 - 28,804,972 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955404	28,759,640 - 28,803,257 (+)	NCBI	ChiLan1.0	ChiLan1.0

OBI1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	14	80,191,945 - 80,239,208 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	13	78,783,266 - 78,830,538 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	13	59,840,406 - 59,884,765 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	13	78,874,466 - 78,918,298 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	13	78,874,466 - 78,918,446 (-)	Ensembl	panpan1.1		panPan2

OBI1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	22	32,006,441 - 32,047,609 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	22	32,007,210 - 32,047,527 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	22	31,803,937 - 31,845,113 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	22	32,327,448 - 32,368,633 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	22	32,327,801 - 32,368,556 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	22	31,989,037 - 32,030,201 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	22	32,026,080 - 32,067,023 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	22	32,098,203 - 32,139,378 (-)	NCBI		UU_Cfam_GSD_1.0

Obi1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	127,383,335 - 127,430,516 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936511	2,800,425 - 2,848,628 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936511	2,800,466 - 2,847,896 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

OBI1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	11	50,740,916 - 50,786,774 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	11	50,741,893 - 50,786,824 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	11	55,430,773 - 55,475,967 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

OBI1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	3	57,683,989 - 57,726,851 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	3	57,683,746 - 57,726,750 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666046	13,913,551 - 13,956,671 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Obi1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624751	21,752,270 - 21,803,930 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624751	21,752,339 - 21,803,387 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Obi1
1801 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	347
Count of miRNA genes:	260
Interacting mature miRNAs:	296
Transcripts:	ENSMUST00000022716
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357589	Kdnw2_m	kidney weight 2 (mouse)			Not determined		14	20887473	121269804	Mouse
10054475	Ossc3_m	osteosarcoma susceptibility 3 (mouse)			Not determined		14	70863768	104863926	Mouse
1300551	Lprm3_m	lymphoproliferation modifier 3 (mouse)			Not determined		14	71221224	105221344	Mouse
1301844	Pgia29_m	proteoglycan induced arthritis 29 (mouse)			Not determined		14	74352296	108352384	Mouse
1558819	Ossc2_m	osteosarcoma susceptibility 2 (mouse)			Not determined		14	74394976	108395093	Mouse
14928314	Manh77_m	mandible shape 77 (mouse)					14	76767790	110767790	Mouse
1558823	Tbbmd6_m	total body bone mineral density 6 (mouse)			Not determined		14	77073696	111073787	Mouse
4142508	Tgq25_m	triglyceride QTL 25 (mouse)			Not determined			85134068	119134068	Mouse
12792981	Fbmd5_m	femoral bone mineral density 5, females only (mouse)					14	99838217	125033054	Mouse

Markers in Region

AI451544

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	14	104,477,799 - 104,477,884	UniSTS	GRCm38
MGSCv37	14	104,877,016 - 104,877,101	UniSTS	GRCm37
Celera	14	103,092,045 - 103,092,130	UniSTS
Cytogenetic Map	14	E2.2	UniSTS
Whitehead/MRC_RH	14	1104.54	UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_026047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011245206	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036158857	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC121997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AH008194	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK011896	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK013314	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK018834	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK020974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC029231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BI986775	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466544	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CN697474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000022716 ⟹ ENSMUSP00000022716

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	104,714,972 - 104,760,068 (-)	Ensembl
GRCm38.p6 Ensembl	14	104,477,536 - 104,522,632 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000227640 ⟹ ENSMUSP00000154694

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	104,739,822 - 104,760,081 (-)	Ensembl
GRCm38.p6 Ensembl	14	104,502,386 - 104,522,645 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000228210 ⟹ ENSMUSP00000153932

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	104,743,719 - 104,760,058 (-)	Ensembl
GRCm38.p6 Ensembl	14	104,506,283 - 104,522,622 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000228448 ⟹ ENSMUSP00000154655

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	104,740,054 - 104,760,069 (-)	Ensembl
GRCm38.p6 Ensembl	14	104,502,618 - 104,522,633 (-)	Ensembl

RefSeq Acc Id:

NM_026047 ⟹ NP_080323

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	104,714,970 - 104,760,102 (-)	NCBI
GRCm38	14	104,477,534 - 104,522,666 (-)	NCBI
MGSCv37	14	104,876,751 - 104,921,883 (-)	RGD
Celera	14	103,091,780 - 103,136,907 (-)	RGD
cM Map	14		ENTREZGENE

Sequence:

show sequence

GCGAGGAGCTGCTGTCGGCGGGACTTCCGTGTTGGCGGGATTCTGAACGCTGCCATGGCTCAGA
CCGTGCAGAACGTTACATTGTCCCTCACTCTGCCCATCACGTGCCACATTTGCTTGGGGAAGGT
ACGTCAGCCTGTCGTATGCACCAACAACCATGTGTTTTGTTCCATTTGCATCGACTTGTGGTTG
AAGAATAATAGCCAGTGTCCAGCCTGCAGAGTCCCGATCACTCCTGAAAACCCTTGCAAAGAGA
TTATTGGAGGAACGAGTGAGAGTGAGCCCATGCTGAGCCATACGGTCAGGAAGCACCTGCGGAA
AACCAGACTGGAGCTACTGCACAGAGAGTATGAGGATGAAATAGATTGCTTGCAGAAAGAGGTA
GAAGAACTTAAAAGTAAAAATCTCAGCTTGGAGTCACAGATCAAGACCATTCTGGATCCTTTAG
CGTTGATGCAGGGCAGTCAAAATGAAGACAAACATCCACTGGCCGATAATCCAAGTAAAATGGA
CCCAGACTCAGTAGTAGAGTGGAAGAAAAAGCTGAGAACAGCTAATGAAATATATGAAAAAGTA
AAAGATGATGTGGATAAGTTAAAAGAGGCAAATAAAAAATTGAAGTTGGAAAACGGTGGCCTGC
TGAGGGAGAATTTACGGCTGAAGGCTGAAGTTGACAACAGATCTCCTCAAAAGTTTGGAAGGTT
TACAGTTGCTGCTCTTCAGTCCAAAGTAGAACAGTATGAACGTGAAACCAATCGCCTCAAGAAA
GCTCTAGAACGAAGTGATAAATATATAGAGGAACTAGAGTCTCAAGTAGCACACCTGAAACACT
CAGAGGAGGCCAAGGAAGACGTGGATGCTCTGTGCCAGAGGGCACCCTCTGCAGATAGCAAGGG
GCCCAACGGCAGCGATGAGCTTGGACCACCAAAGAATCAGAGTGACAGTGCCAGAAAGCAGGCT
GGCTCGGCCAGTGCTTCTCACCTGGCCTCACCTTCTAGCAGCAGACTAGCTGACTCCGGTTCTG
TCAGACAGGAGAGCACCAGCAGGACTGAACCAAACTGTCCCCAAAACAAAGACAGATACCCCAA
GCCCACAGAACCTCGGCTGGGTGCAAGAGAGACTCCGATGGACACTTACTTGGAAAGAGAGTGG
GGCAGCAAGCCAAGCGACTGTGCACCTTACAAAGAGGATGAGCTTTATGGTATCCCAGCTTCCT
GCACTCCCTTGTCACTTAGCTGCCTTCAGCTGAACACTCCAGAAAACAGAGAGAACCCTGTGAT
CAAAGCAGGGAGCTCCAAAAAGCATGCAAACCATCTCAGAAAACTGGTCTTTGATGATTTCTGT
GATTCTCCAAATGCCTGTAATAACAATTCTTCAGAGGATGATAGAAGGGAAAATGAAAAGAAAT
CAGACTGCTTTGCTTCCTCAAAGACAGGATTTTGGGATTGTTGCTCCACAAGCTATGCCCAGAG
CTTGGAGTTTGACGGTTCAGAGGGAAACGCAATAGCAAACTCTGTTGGGGAGATACCTTCAAAA
TTGAGTGAGAAGTCAGGATCGTGCTTGTCCAAGAGACTCAGCTGTATCCGCTCCCTCGAAATGA
ATCGAACAAGAACATCCAGTGAGGCGTCCATGGATGCTGCTTATCTCGACAAAATCTCTGAGCT
GGACTCCATGATGTCAGAGTCTGACAACAGCAAGAGCCCTTGTAATAACGGTTTTAAATCGGTG
GAGGTGGAGGGGCCCTCAAAGTCACCTCAAGGCAGGGAGTTTCTCGAGGAACCTGACAAGTTAC
AAGAAGGAAGTAAACTGAACCTTTCCAAACCTGCTCTCACAGCTGACGGGTTAGAGAGTGGGGG
GGAGTGGAAACCCAGCTCTTTCTTTCTCCTTTCTCCAGCTGACCACGAGATGAGTGAAGATTTT
TCTCTCCACTCCACTTCTCATTCAGGAACTAGTGAGGTCAAACCTCCAAACTGTTTGTTTCAGA
CAGAGTTTTCCCAGGGTGCTCTGTTAAGCAGTTCCCAGGGATTATTTGAGGATCAGAGGTTTGG
ATCGTCCTTATTTAAGATGTCCTCAGAGATGCAGAGCCTTCACAGCCCTCTTCAGTCTCCGTGG
TCTGCTGCCTTTGTGCCTGAAAAGAGGAGTAAGAATGGGAACCAGTCAACCAAGAGAAAGATAC
AGAGCAGCCTTGCCAACGCCAGCCCGTCCAAAGCCACCAAAAGCTGACTCACCAGGGGATAGCC
TTGCAAGGGGTGGGGGTGTTTTCAATGTTACTGTAGTCACTTCATGAAGGTTCTATACAATCCT
GAACTGATAATCTTCAGTCAAGTGTCAACTCAGAATGGTGGGTCACCTATCTCCAGGGTACTGC
ATCTTGAAGAAACTGGTCTGTCTCTCTCGTTTGGTCATCTTTTTAACCAGAGAGCTTAGAGAGA
TGATCGGATTTGTCTCTGTGTTGTTTGTTCTCTTTGTAAGGAATGTTGTGTGTATCTGGATTGG
CTCCATATTGTTCTCTCAGATCTGGCTTGTTAGGTATGGTGGCCTGTTAAGGCTCAACTGCCTT
CAGAACCTGTGTTTCTTAGAACATTTAATTTTGTCTGTTCTGTTCTTTAAAGCTTTTCCTAGAA
TGGAAATGTGTATTCCTCATTTTATTTGTGTTTAATGCTGGCCTAACTATTACCAAGGCCATGC
TGGAGAAATGGCACTCCGATCTTAGAGGATTCACTGACGTTTTCTTAGGTTTTATATAGATGTT
TACAATTTGTTATATTGTATTCTGTCCATTTTGTGTGCCTGTGCGTGTGTGTGTTTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTAGTATGAAAGA
GCACATTGTTTGTATGAAAAGACTTTCAAGTCATTTATATTTGCATATTTTTGAACATGTGTAT
GGGTGTAAAGTTAGAATCATTATGTGTTGGAAGGCAGGCACATCAGCTGGGTTTGGAGGAACTT
AAACATCCTAGCTCCCCCCCCCCCAAATGTGTAGGTAGACAGGCCATCTGTGTCGCAGGGAGCC
TTTTTGTGTAGTGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGC
CTTTTCGCTTGCTCCATTCTCCAACCAGAGGGAAAAACCCTCTTACTGGCTGGTGAATGTCTTA
TTATGTAGAACATTTTTTTAAAATGAGAAGTAACAGGTGTGAATGGGGCAATGTGAGCGCGAAG
CACAACTGTTAGTGTAGGATTTAAAAGTACGTTATTCTAAACATGTTCGGTATGCCAACATAGG
CTATAAAAATGTCTGTATGCTAATAACTTGCTTATCTAATGTGCGCTGAACATTTTACATGTAT
TGTTTTACCTTGACACTGCATGCTTTTTTATGTGAATTAAATAAAGGATGTCATATACACTACA

hide sequence

RefSeq Acc Id:

XM_011245206 ⟹ XP_011243508

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	104,739,264 - 104,760,148 (-)	NCBI
GRCm38	14	104,501,828 - 104,522,712 (-)	NCBI

Sequence:

show sequence

TGGCCCTGCCAGGCCGCCGTAGCCGGCCTCGCGCATTCCCAGCGTGGCGAGGAGCTGCTGTCGG
CGGGACTTCCGTGTTGGCGGGATTCTGAACGCTGCCATGGCTCAGACCGTGCAGAACGTTACAT
TGTCCCTCACTCTGCCCATCACGTGCCACATTTGCTTGGGGAAGGTACGTCAGCCTGTCGTATG
CACCAACAACCATGTGTTTTGTTCCATTTGCATCGACTTGTGGTTGAAGAATAATAGCCAGTGT
CCAGCCTGCAGAGTCCCGATCACTCCTGAAAACCCTTGCAAAGAGATTATTGGAGGAACGAGTG
AGAGTGAGCCCATGCTGAGCCATACGGTCAGGAAGCACCTGCGGAAAACCAGACTGGAGCTACT
GCACAGAGAGTATGAGGATGAAATAGATTGCTTGCAGAAAGAGGTAGAAGAACTTAAAAGTAAA
AATCTCAGCTTGGAGTCACAGATCAAGACCATTCTGGATCCTTTAGCGTTGATGCAGGGCAGTC
AAAATGAAGACAAACATCCACTGGCCGATAATCCAAGTAAAATGGACCCAGACTCAGTAGTAGA
GTGGAAGAAAAAGCTGAGAACAGCTAATGAAATATATGAAAAAGTAAAAGATGATGTGGATAAG
TTAAAAGAGGCAAATAAAAAATTGAAGTTGGAAAACGGTGGCCTGCTGAGGGAGAATTTACGGC
TGAAGGCTGAAGTTGACAACAGATCTCCTCAAAACCTGTAAGGTGATCTGTCAGATGATGTCTC
TGGGAATATCTCAAGGGCCTCTCAGCAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGGTGACAGAACAATAGAGCCATCTAGGT
CAAAAGGCTCCACCCCAGTTGGTCTCCTTCTCAGTGGCAGCAAGGTCAAAGCCAGCCTACTCAA
GGCTGGAGGAAGCTACAAGAAAGGATCTCATTCCTTACTTTTTCTTTTTCTGCCTTTGATGTAT
AAAAATACTGTTTTATGTTACCTAAGACAAATGAGCCCTCACTTGGTTTTCCATATAACTATTT
AATAGTACTAATGAGATAAACCTGCCCCTGAGCTGTTTTATGACATCATCTTGGTCATGTGATG
TGTTCTCTGCCTGGTACCGTAGGATGGATGTAACAGGTTACTCCTGAGAAGTGAGGGGATGGAG
GCACAGAGAGGTAGGCTCTCTTATCCTAGTCTGCCCAGGAGTAAGTAAGTGGAGCAAGCAGCGC
TTGAACTCAGGGTACTGCCCCAGACTGAGCACTAAGCAACTATAGGAAAAGCCTTGCCCGAAAT
AAAATGAGCCTTTGTCATCCAAATCTTGAGCTGATTATTTGAAACTGCAGTGAATTAATTCTTC
TTTTATGATGGTAGAGTCTTTACTCTGTGTTAGAAGATACAAAGTTGTAAGAAGTTAAGGGGTG
ACGACAGACATATAAAAAAGAGAATATCTTGGAGTCCTCAACCCTACTCCACCATCCAGAGGAA
ACAGGCAAAGGAGGAGACAGTATGGCCACAGGGTGTGCAGTCTCTGAAGGCTGTGCACCAGAAT
ATTATCATTTTTCCATTGCTGGCTGTAGACGTCATTTTTCTATTGGAAGAAGACAAAAATAGGA
CTAAGTAAATGAGGGAAGTTTAGTCTACCAGAAAAGGACAGCCATGGGGAAAGTTGTATGGTTT
AGGGAATGATGAAGGTAAATCCTACTGACACACGGGGAGATTAAAAACCAGGGGTTAAAAAAAA
GCTATAACTTCTACCCTTAAGTGTTCCCTTCTCCCATCTCTCCACCCCTGTTTTGTTTTTGTTT
TTTTTTTCCTGCCAGATAATGTCCTACTTTGACAAATTAGTGAAATAAACTGAGAAATTGTTGT
TTTGA

hide sequence

RefSeq Acc Id:

XM_036158857 ⟹ XP_036014750

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	104,714,970 - 104,740,431 (-)	NCBI

Sequence:

show sequence

GATGATGTCTCTGGGAATATCTCAAGGGCCTCTCAGCAGGTAGCAGTGTCTTGGAGAAGAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGGTGACAGAACAATAGA
GCCATCTAGGTCAAAAGGCTCCACCCCAGTTGGTCTCCTTCTCAGTGGCAGCAAGGTCAAAGCC
AGCCTACTCAAGGCTGGAGGAAGCTACAAGAAAGGATCTCATTCCTTACTTTTTCTTTTTCTGC
CTTTGATGTATAAAAATACTGTTTTATGTTACCTAAGACAAATGAGCCCTCACTTGGTTTTCCA
TATAACTATTTAATAGTACTAATGAGATAAACCTGCCCCTGAGCTGTTTTATGACATCATCTTG
GTCATGTGATGTGTTCTCTGCCTGGTACCGTAGGATGGATGTAACAGGTTACTCCTGAGAAGTG
AGGGGATGGAGGCACAGAGAGGTAGGCTCTCTTATCCTAGTCTGCCCAGGAGTAAGTAAGTGGA
GCAAGCAGCGCTTGAACTCAGGGTACTGCCCCAGACTGAGCACTAAGCAACTATAGGAAAAGCC
TTGCCCGAAATAAAATGAGCCTTTGTCATCCAAATCTTGAGCTGATTATTTGAAACTGCAGTGA
ATTAATTCTTCTTTTATGATGGTAGAGTCTTTACTCTGTGTTAGAAGATACAAAGTTGTAAGAA
GTTAAGGGGTGACGACAGACATATAAAAAAGAGAATATCTTGGAGTCCTCAACCCTACTCCACC
ATCCAGAGGAAACAGGCAAAGGAGGAGACAGTATGGCCACAGGGTGTGCAGTCTCTGAAGGCTG
TGCACCAGAATATTATCATTTTTCCATTGCTGGCTGTAGACGTCATTTTTCTATTGGAAGAAGA
CAAAAATAGGACTAAGTAAATGAGGGAAGTTTAGTCTACCAGAAAAGGACAGCCATGGGGAAAG
TTGTATGGTTTAGGGAATGATGAAGGTAAATCCTACTGACACACGGGGAGATTAAAAACCAGGG
GTTAAAAAAAAGCTATAACTTCTACCCTTAAGTGTTCCCTTCTCCCATCTCTCCACCCCTGTTT
TGTTTTTGTTTTTTTTTTCCTGCCAGATAATGTCCTACTTTGACAAATTAGTGAAATAAACTGA
GAAATTGTTGTTTTGATGTGGGCTTGAATCCTTGTCACTGGCAGCTCGCCCTGCCAGTCACAGT
AATGTTTATCCATTAGCCCTTTCCCACAGCGCGCTGAATGGAATGAAAGCTATTTTGTTTGTAG
CTTTTATTTCTTGAAAAGTTGCCCACCAGATTTCAAAATCCGTGCCAGCCACAAAGATGTCTGC
TTTTAAATATCCATGACTTCTACCAAATAAATAACTGGAGGCTCTCACCTGAGGAACTCTGACC
TCCCATCTACTTGCCAACAAGCAGCCACACATCCGAGTCCTGTGTCACTGCAGCACTCACAGCT
CTAACTTGTGTTCCTTTTCCTCTTCATAGGAAGCGGACATTTTCACTTGAACAAGGATTTGAGT
TGACCCCTATTCCAGATCAATTTGCAAAGCATTGAGGTATTAAATGCATTGCATTTGATTTATA
CCTTTGTTTACTCTGCACCAGTAAATCCTGGTGGAATTCAGAGAGAAGCTGATGACAGCTGAAA
ATACCCAAATCTGGTTCACTTGCAGAGTACTTCTGTTTGTGTAAAAACAAATAACGAAATTTTA
AGAATTTAAAGGTAAATGCAGACATACAGAAATGAGCCATTAATTTCCTTCCCTGCCTAGGAAG
TGCCTTGAGCAATTACTTCTTTCCTATTTAGTTGGTGAAGTGTAAAGGAATACTTCCTACTCTG
TGCACAAGCTGGTGTTCTCTGTTACACCCACAGCCTGAGCAGGCTCCTAAGACTGCACTTTAAA
TTTACACACTAAAGTCAAAAAGAATTAGAAGATGTTTAGTCATCTCAGGCTTCCATAACAAAAT
AGATTTACAGTTTGACTTAAATCTTAAAGAATAGGTTTATTTTTTCACAAGTGCTGAAGGCTGA
GAACAGGGCTTGGCATGTTCATTTCTGAGACATGCTCTTTGTGACTTCCAACAGCAACGTTCTT
ATTATACCTTCAAAGAGTAAAGGGAGAAGAGTGAAAGGGTTTTTATCTCTCTTCTTCTAAAATC
ACGATTCAGGATTCTGTAGGGTTAGGTCTCACCACTGTGACCTAATTTAACTTTAATTACCCCT
TGAATACCTTGTTTCCAGATATAAGTATACTGAGATAGAGGGCTTCACATAATAGTCTGTGGCT
GCATCCCCCTATTGAAAACATGGGGAACTGGAGCATTTATATTGGTTTCAAGTGACATGGTTTT
ATCTTTTCTTTTCTTTTGTTTTTGTTTTTGGTTTTGGTTTTGCTTTCAAGACAGGGTTTCTCTG
TGTAGCCCTGGCTGTCCTAGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAAGCCAC
CTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGTGCCTGGTGTAGTTTTATCTTTTATAA
TGGAAGTGTAAGTTATCATTTATCTCCAGTTGTAGGCATATATCATGTTAGTGCTCAAGAATGA
AGGCTTCCTTCTCAAAATCATTTATTTAATTTTATACCACTACATTATAATCTTCAAAGCCATA
CTTCCTGGCAAGCAAAACTTCACTACATCTGCTTCTCCAAATTCAGAGTTGGGTTGTTGTTGTT
GTTCTTCAGAAATTTTGCTTTAATTTTTGTTTTGTTTTTCGAGACAAGATTTCTCTGTGTTAGC
TGTAGCTGTCCTCAGACTCACTCTGTAGATCACCCTGGCTTTGAACTTAGATCTACCTCCAAGG
TGCTGGGGATAAAGTGGTACAGCAGTACTGCCCAGCTGGAAGACTTGTTCTTAGTCTAAGTATA
TGAGAAATATCAAGAGGATCACACCCATACATAGTGGTATAGAATGGGAACTTGCCAAAGGGGA
AGAATTCAATACTGAAGTTTTCATATTTCTAAATGTCCTTGATTCCAAATACTATTACTAAGCT
GTGTCATATCACCAAGTACGATTACATTTGTACTTGCTGGAATTGGGAACTCCTTAGTGACCTT
TGAACTCAAAGAAATGTGACATTTCTACTTATGACACACTTGAAAGTTCCTTAGTTTATCACAC
AGGTACTTCCCTTATTTGTATCTTCTCTGCCCACACCTCCAAGAACTTATGTTAGTTACCTTTC
CATCACTGTGACCAAAAATACATGGCAGAAACAATTTAAGGGTAAAAAGATTTATTTTGCTTTA
CAGTTTTGGAGGTTTCAGCCCATCAGTCAGAGTTTGAGAGGCTGCATCCGTGTCAGTGGAAACA
GAGTAGCTCACCATTCACTTGACAGGGAACAGGAAGCGGAGCGCTAGACTAGAAGGAACCAGGG
TGGGTGTAGCCTTCAAAGGCTCCCTCTAGGAACTTCCTGTCTCAGCCAGGTCCACCTTTTAAGG
GCTCTATAGTCTTATGAGCCTCTGGGGACATCCATATCCAAGCTGTGACATTCTGACTAATGGC
ACTTTAACAGCTGCTGCTTGTGCTATAATACAAAATGTGTTGAGTTCAATTCAAAAGTCCCTAC
AGACTAAACAGTCTCAACTCTTAAGATTCAGAGCTCTGAAACAAGCTCTCTTAGTTGTGAGCTC
TTATAAAATCAAAATAAAGTTCCATATTCCAACATGAAATGAAATAAACATTCCTTTCCAAATG
GAAGGAACTGTAGAATACCAAAGAAAGATTAGATCAACAGTACAAACATTTGACCCAGTAGCTC
CATGCTTGGCACCAAGATATATGGTGTTATCATCAGAACCCCACTGGGCTGTGGCTCTGCCACT
TATGACCTGTCCTCACTAACACTTTCTCATACCCATTTCACCAGTTTTAAAATCCTGGGGTCTC
CATGGCAACTTGGACTTCATCTTAAAGCTTGGCTCACAGCATGCTCAAGAGTTTCCTGTACAGA
ATCCAGCCATATATATGACCACGCCTCAAGTATGGCTTTTATGAAATCTGGGTACAAACCTTCA
GCTCTGTAACTCTTGTATTCTATATGGCTGTAAAACAGTGCCATATGAACAACACCAAGCTATT
GCCAACTCAAGAAGTAGGGTGGCCCTTTGCATATGCAGCATTCTCTGCCTGCATGGTTAAATCT
AGAAAAGTATTTTACTAGGTGGCCTTAATCTACAAGAAGGCCCTTCAGCTTGCTGGTTTTAAAT
GAATTCTGAATGTTTTTCCAGTTTTACACCCTGGGACTTTCAAAAGGAAGGGTAATACCTTTAA
TTATCTGTCCTATTGTCCCAGTGCAAAGTGTGCCACTAATCTCAACACCTGTCTACAGCATTAA
TTCAGATCTTGTATCTTTCTTTGCCGAACAGCATGGTTTTAAAACCCTTCATTCTTTAGTCTTG
GTTCTCACTATAAATCTGGCCAAAAGTAGTGAGCAATAGCAATTTCATTTTATAAAACGTTTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATCTGTACTTGTAAGTGCAAGTGCTCAC
AGAGTCCAGAAGAGGGAATTAGATCCCTGGAAGTAGTTAGAGGCGGTTGTAAGATACCCAGTAT
AGATGTTAAGAACCGAACACCAGTACTCTCCAAGAGCAATACATGCTCTTAACCACTGAGCCAT
CTCTCCAGCATATGCAGCAGCCATTTCACAGCTCGAATGCTGTGCTATTTAGAAAATTTCTCTG
GCAAATAAATTAGACTAGTAAGTTTCACTAAGTTTCAGTACATAGACAAAATGTAGACAAATTC
TTTGTCAGAACATTATATGAGTGGCCACTGGTTTAATTGCCTCTAATGTTTGTTCCCATCTGAG
GCTTCACATGCAGTCTTTACTATCAGTACTTCTATCAGCATTCTGGTCTTTAGAATCCCCTGAA
GTCGCCCATTAAGTCCACTTAGAGACTTTGAAGACTCCTTAGTCTACATCTCCCTCCAAACTGT
TCTACTTTCCCCACAAACCATTCCAAAGGCTAAGAACCAAATGATCTGGTTTATGTGATTGTAG
CCATGGCTCCGATCTTGGTAATGATTTTCCATATTCTTTCCATATGCTGTGCTCACAGTAACCA
ACAGAAATAATTAAAAGAAGAAAGGCTTATTTTTTTACCTTACTGTTTCAGAAAACTTTCATCC
ATTCAAATCTGGAAGACATGGGAGAAAGTTATCTGTGGCATCAAAACCTTGAAGCAGCCACTGT
TCAGGTGGCATGGCCCAGGAAACAGCTAGACCAGACCAGAATCAGTGACAGATGTAACCTTCAG
AGCCCTAACATAGTAACCTCTTCCAGCCAGATGCTCTTTGACCTTCTACGAGTACTCACTGAAA
GTGTGAGCTAATGGGACAGTCACAGTCAAACCACAACGGGCAGAGATGTTACCTGTCATCAGTT
TTGGCGAGGCAGCTGCTCTCATCTTCAGCTGTTGAGTCACCTCAAATGTTTAGAATATGAAGAC
AGATGTATAACGTTTTGGAAGTTGAGGCACAAAGCATGATGGTTAAGGGCTTAACTGCAAAGAC
AGACTGCCTGATTTCAGATTTCTGTGCTACTATTCTGTCCCTGTGTTCTCTGCATAATTCATTT
TCTGCTACACTCAGAATCGAGTTGCTTAAGCTCTTGCCTTAAACTTCCCAGTATTTTCCAAAAA
AGTAAATGCAGAGCCTTCATAGCCTCTTCTGTACCTGACTCTTCCCTCTCCTTGCTCTCTAGCT
CACGCTTTGCACTCTCCTGACCTGTTTTTAAGACATGCATGGCAGGCATCATCTATGTAGAGTG
CTCCTTTCTGATGTTTATGGAGTTGCCTCTGTCCAGCATCAGAGTCACTTTTCTGATTGTATTG
TTGAAAGCAGCCCCTGCCTTCATTGCTTCCCATTTCCTTACCGTTTCTGGAGTGGTCAAAGGAA
AGGCTGGAATAAGAAAATCATACAGGGAAGTGTTTGGGTATGGTAACTATGAACATGGGCTCTA
GTACTCGACTCCTTAGGACTGAACACTGACTGTTCTTACAACCTCTGGGGGTTTTCTCCATTTC
AGTTTTGGGCCTCTGTGAAATGGGGCCAGTGGGACTTACCTACCATAAAGGTTATACTTGGGGT
TAAGCAAATTAAACTTTTAAATGTACTTAGCACAGAGTCCATAGTTAATATTCAGCCAGTCTTA
CAGTATGGTCACTATAGTCTTCTCAGTCCCCGAACTTCCTGTGTCATTAAGTTGTTTATGTCTT
TGTTGTCTGTCTGCTTGATTCTGAACTCTGAATTCAACAGTAAGACCCTTGCAGCCTGTCTCTC
AGTCTCTCACACCTGGAAAGCACCTGGTTTGGAAGGTTTACAGTTGCTGCTCTTCAGTCCAAAG
TAGAACAGTATGAACGTGAAACCAATCGCCTCAAGAAAGCTCTAGAACGAAGTGATAAATATAT
AGAGGAACTAGAGTCTCAAGTAGCACACCTGAAACACTCAGAGGAGGCCAAGGAAGACGTGGAT
GCTCTGTGCCAGAGGGCACCCTCTGCAGATAGCAAGGGGCCCAACGGCAGCGATGAGCTTGGAC
CACCAAAGAATCAGAGTGACAGTGCCAGAAAGCAGGCTGGCTCGGCCAGTGCTTCTCACCTGGC
CTCACCTTCTAGCAGCAGACTAGCTGACTCCGGTTCTGTCAGACAGGAGAGCACCAGCAGGACT
GAACCAAACTGTCCCCAAAACAAAGACAGATACCCCAAGCCCACAGAACCTCGGCTGGGTGCAA
GAGAGACTCCGATGGACACTTACTTGGAAAGAGAGTGGGGCAGCAAGCCAAGCGACTGTGCACC
TTACAAAGAGGATGAGCTTTATGGTATCCCAGCTTCCTGCACTCCCTTGTCACTTAGCTGCCTT
CAGCTGAACACTCCAGAAAACAGAGAGAACCCTGTGATCAAAGCAGGGAGCTCCAAAAAGCATG
CAAACCATCTCAGAAAACTGGTCTTTGATGATTTCTGTGATTCTCCAAATGCCTGTAATAACAA
TTCTTCAGAGGATGATAGAAGGGAAAATGAAAAGAAATCAGACTGCTTTGCTTCCTCAAAGACA
GGATTTTGGGATTGTTGCTCCACAAGCTATGCCCAGAGCTTGGAGTTTGACGGTTCAGAGGGAA
ACGCAATAGCAAACTCTGTTGGGGAGATACCTTCAAAATTGAGTGAGAAGTCAGGATCGTGCTT
GTCCAAGAGACTCAGCTGTATCCGCTCCCTCGAAATGAATCGAACAAGAACATCCAGTGAGGCG
TCCATGGATGCTGCTTATCTCGACAAAATCTCTGAGCTGGACTCCATGATGTCAGAGTCTGACA
ACAGCAAGAGCCCTTGTAATAACGGTTTTAAATCGGTGGAGGTGGAGGGGCCCTCAAAGTCACC
TCAAGGCAGGGAGTTTCTCGAGGAACCTGACAAGTTACAAGAAGGAAGTAAACTGAACCTTTCC
AAACCTGCTCTCACAGCTGACGGGTTAGAGAGTGGGGGGGAGTGGAAACCCAGCTCTTTCTTTC
TCCTTTCTCCAGCTGACCACGAGATGAGTGAAGATTTTTCTCTCCACTCCACTTCTCATTCAGG
AACTAGTGAGGTCAAACCTCCAAACTGTTTGTTTCAGACAGAGTTTTCCCAGGGTGCTCTGTTA
AGCAGTTCCCAGGGATTATTTGAGGATCAGAGGTTTGGATCGTCCTTATTTAAGATGTCCTCAG
AGATGCAGAGCCTTCACAGCCCTCTTCAGTCTCCGTGGTCTGCTGCCTTTGTGCCTGAAAAGAG
GAGTAAGAATGGGAACCAGTCAACCAAGAGAAAGATACAGAGCAGCCTTGCCAACGCCAGCCCG
TCCAAAGCCACCAAAAGCTGACTCACCAGGGGATAGCCTTGCAAGGGGTGGGGGTGTTTTCAAT
GTTACTGTAGTCACTTCATGAAGGTTCTATACAATCCTGAACTGATAATCTTCAGTCAAGTGTC
AACTCAGAATGGTGGGTCACCTATCTCCAGGGTACTGCATCTTGAAGAAACTGGTCTGTCTCTC
TCGTTTGGTCATCTTTTTAACCAGAGAGCTTAGAGAGATGATCGGATTTGTCTCTGTGTTGTTT
GTTCTCTTTGTAAGGAATGTTGTGTGTATCTGGATTGGCTCCATATTGTTCTCTCAGATCTGGC
TTGTTAGGTATGGTGGCCTGTTAAGGCTCAACTGCCTTCAGAACCTGTGTTTCTTAGAACATTT
AATTTTGTCTGTTCTGTTCTTTAAAGCTTTTCCTAGAATGGAAATGTGTATTCCTCATTTTATT
TGTGTTTAATGCTGGCCTAACTATTACCAAGGCCATGCTGGAGAAATGGCACTCCGATCTTAGA
GGATTCACTGACGTTTTCTTAGGTTTTATATAGATGTTTACAATTTGTTATATTGTATTCTGTC
CATTTTGTGTGCCTGTGCGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGAACTAGTATGAAAGAGCACATTGTTTGTATGAAAAGACTTT
CAAGTCATTTATATTTGCATATTTTTGAACATGTGTATGGGTGTAAAGTTAGAATCATTATGTG
TTGGAAGGCAGGCACATCAGCTGGGTTTGGAGGAACTTAAACATCCTAGCTCCCCCCCCCCCAA
ATGTGTAGGTAGACAGGCCATCTGTGTCGCAGGGAGCCTTTTTGTGTAGTGAAGTTCTTGTTTG
CATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGCCTTTTCGCTTGCTCCATTCTCCAACC
AGAGGGAAAAACCCTCTTACTGGCTGGTGAATGTCTTATTATGTAGAACATTTTTTTAAAATGA
GAAGTAACAGGTGTGAATGGGGCAATGTGAGCGCGAAGCACAACTGTTAGTGTAGGATTTAAAA
GTACGTTATTCTAAACATGTTCGGTATGCCAACATAGGCTATAAAAATGTCTGTATGCTAATAA
CTTGCTTATCTAATGTGCGCTGAACATTTTACATGTATTGTTTTACCTTGACACTGCATGCTTT
TTTATGTGAATTAAATAAAGGATGTCATATACACTACA

hide sequence

Protein Sequences


Protein RefSeqs	NP_080323	(Get FASTA)	NCBI Sequence Viewer
	XP_011243508	(Get FASTA)	NCBI Sequence Viewer
	XP_036014750	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH29231	(Get FASTA)	NCBI Sequence Viewer
	BAB27902	(Get FASTA)	NCBI Sequence Viewer
	BAB28786	(Get FASTA)	NCBI Sequence Viewer
	BAB32265	(Get FASTA)	NCBI Sequence Viewer
	EDL00511	(Get FASTA)	NCBI Sequence Viewer
	EDL00512	(Get FASTA)	NCBI Sequence Viewer
	EDL00513	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000022716
	ENSMUSP00000022716.3
	ENSMUSP00000153932.2
	ENSMUSP00000154655
	ENSMUSP00000154655.2
	ENSMUSP00000154694.2
GenBank Protein	Q8K2Y0	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_080323 ⟸ NM_026047

- UniProtKB:

Q9D1Y0 (UniProtKB/Swiss-Prot), Q9CYU1 (UniProtKB/Swiss-Prot), Q8K2Y0 (UniProtKB/Swiss-Prot), G3X8V5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAQTVQNVTLSLTLPITCHICLGKVRQPVVCTNNHVFCSICIDLWLKNNSQCPACRVPITPENP
CKEIIGGTSESEPMLSHTVRKHLRKTRLELLHREYEDEIDCLQKEVEELKSKNLSLESQIKTIL
DPLALMQGSQNEDKHPLADNPSKMDPDSVVEWKKKLRTANEIYEKVKDDVDKLKEANKKLKLEN
GGLLRENLRLKAEVDNRSPQKFGRFTVAALQSKVEQYERETNRLKKALERSDKYIEELESQVAH
LKHSEEAKEDVDALCQRAPSADSKGPNGSDELGPPKNQSDSARKQAGSASASHLASPSSSRLAD
SGSVRQESTSRTEPNCPQNKDRYPKPTEPRLGARETPMDTYLEREWGSKPSDCAPYKEDELYGI
PASCTPLSLSCLQLNTPENRENPVIKAGSSKKHANHLRKLVFDDFCDSPNACNNNSSEDDRREN
EKKSDCFASSKTGFWDCCSTSYAQSLEFDGSEGNAIANSVGEIPSKLSEKSGSCLSKRLSCIRS
LEMNRTRTSSEASMDAAYLDKISELDSMMSESDNSKSPCNNGFKSVEVEGPSKSPQGREFLEEP
DKLQEGSKLNLSKPALTADGLESGGEWKPSSFFLLSPADHEMSEDFSLHSTSHSGTSEVKPPNC
LFQTEFSQGALLSSSQGLFEDQRFGSSLFKMSSEMQSLHSPLQSPWSAAFVPEKRSKNGNQSTK
RKIQSSLANASPSKATKS

hide sequence

RefSeq Acc Id:	XP_011243508 ⟸ XM_011245206
- Peptide Label:	isoform X2
- UniProtKB:	A0A2I3BRT6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQTVQNVTLSLTLPITCHICLGKVRQPVVCTNNHVFCSICIDLWLKNNSQCPACRVPITPENP CKEIIGGTSESEPMLSHTVRKHLRKTRLELLHREYEDEIDCLQKEVEELKSKNLSLESQIKTIL DPLALMQGSQNEDKHPLADNPSKMDPDSVVEWKKKLRTANEIYEKVKDDVDKLKEANKKLKLEN GGLLRENLRLKAEVDNRSPQNL hide sequence

RefSeq Acc Id:

ENSMUSP00000153932 ⟸ ENSMUST00000228210

RefSeq Acc Id:

ENSMUSP00000154694 ⟸ ENSMUST00000227640

RefSeq Acc Id:

ENSMUSP00000022716 ⟸ ENSMUST00000022716

RefSeq Acc Id:

ENSMUSP00000154655 ⟸ ENSMUST00000228448

RefSeq Acc Id:	XP_036014750 ⟸ XM_036158857
- Peptide Label:	isoform X1

Protein Domains

RING-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8K2Y0-F1-model_v2	AlphaFold	Q8K2Y0	1-722	view protein structure

Promoters

RGD ID:

8683158

Promoter ID:

EPDNEW_M19609

Type:

initiation region

Name:

Rnf219_1

Description:

Mus musculus ring finger protein 219 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	14	104,522,627 - 104,522,687	EPDNEW

RGD ID:

6824566

Promoter ID:

MM_KWN:17693

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day1, 3T3L1_Day3, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

NM_026047, UC007UXD.1, UC007UXE.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	14	104,921,596 - 104,922,096 (-)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1919736	AgrOrtholog
Ensembl Genes	ENSMUSG00000022120	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000022716	ENTREZGENE
	ENSMUST00000022716.4	UniProtKB/TrEMBL
	ENSMUST00000227640.2	UniProtKB/TrEMBL
	ENSMUST00000228210.2	UniProtKB/TrEMBL
	ENSMUST00000228448	ENTREZGENE
	ENSMUST00000228448.2	UniProtKB/Swiss-Prot
Gene3D-CATH	3.30.40.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	OBI1	UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
	RNF219_RING-HC	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Znf_RING	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:72486	UniProtKB/TrEMBL
MGD	MGI:1919736	ENTREZGENE
NCBI Gene	72486	ENTREZGENE
PANTHER	ORC UBIQUITIN LIGASE 1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR14609	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	zf-C3HC4_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Obi1	PhenoGen
PROSITE	ZF_RING_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	RING	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	RING/U-box	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A2I3BPV5_MOUSE	UniProtKB/TrEMBL
	A0A2I3BRT6	ENTREZGENE, UniProtKB/TrEMBL
	G3X8V5	ENTREZGENE, UniProtKB/TrEMBL
	Q8K2Y0	ENTREZGENE
	Q9CYU1	ENTREZGENE
	Q9D019_MOUSE	UniProtKB/TrEMBL
	Q9D1Y0	ENTREZGENE
	RN219_MOUSE	UniProtKB/Swiss-Prot
UniProt Secondary	Q9CYU1	UniProtKB/Swiss-Prot
	Q9D1Y0	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-04-14	Obi1	ORC ubiquitin ligase 1	Obl1	ORC ubiquitin ligase 1	Symbol and/or name change	5135510	APPROVED
2020-04-07	Obl1	ORC ubiquitin ligase 1	Rnf219	ring finger protein 219	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar