Vmn2r77 (vomeronasal 2, receptor 77) - Rat Genome Database

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Gene: Vmn2r77 (vomeronasal 2, receptor 77) Mus musculus
Analyze
No known orthologs.
Symbol: Vmn2r77
Name: vomeronasal 2, receptor 77
RGD ID: 1616328
MGI Page MGI
Description: Predicted to enable G protein-coupled receptor activity.
Type: protein-coding
RefSeq Status: INFERRED
Previously known as: EG546983; vomeronasal receptor Vmn2r77
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39786,444,349 - 86,461,240 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl786,444,235 - 86,464,348 (+)EnsemblGRCm39 Ensembl
GRCm38786,795,141 - 86,812,032 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl786,795,027 - 86,815,140 (+)EnsemblGRCm38mm10GRCm38
MGSCv37793,943,651 - 93,960,542 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36786,670,902 - 86,687,793 (+)NCBIMGSCv36mm8
Celera784,170,537 - 84,187,407 (+)NCBICelera
Cytogenetic Map7D3NCBI
cM Map748.51NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:17382427   PMID:21873635  


Genomics

Variants

.
Variants in Vmn2r77
1010 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:65
Count of miRNA genes:65
Interacting mature miRNAs:65
Transcripts:ENSMUST00000164996
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1301514Rigs1_mradiation induced gastroschisis 1 (mouse)Not determined73628001592394346Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
25314303Vmm4_mvariable multisystem mineralization 4, kidney (mouse)73729942587049208Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined739673887103510010Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
13208555Lgth10_mbody length 10 (mouse)751649748125599172Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
25823170Hrsq7_mhost response to SARS QTL 7, log titer (mouse)754819589116822815Mouse
11565101Tsve1_mvariable short tail (Tsv) enhancer 1 (mouse)75588950887142720Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
1300952Hcs1_mhepatocarcinogenesis susceptibility 1 (mouse)Not determined75732612191326352Mouse
1301465Egrm3_mearly growth rate (mouse)Not determined75732612191326352Mouse
1301663Skull9_mskull morphology 9 (mouse)Not determined75732612191326352Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)761749748121399223Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)761749748123699223Mouse
25314305Vmm6_mvariable multisystem mineralization 6, eye (mouse)761849748102749207Mouse
1301383Aem2_manti-erythrocyte autoantibody modifier 2 (mouse)Not determined76413542498135653Mouse
26884381Bzwq2_mbi-zygomatic width QTL 2, 5 week (mouse)76524974896949207Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765249748126499172Mouse
11553865Stmm1c_mskin tumor modifier of MSM 1c (mouse)76578898699788986Mouse
11553866Stmm1d_mskin tumor modifier of MSM 1d (mouse)76578898699788986Mouse
27095937Ulnl7_mulna length 7, 10 week (mouse)76644974898349207Mouse
12801463Rta1_mretinal aging 1 (mouse)76716802789089989Mouse
1301826Pgia3_mproteoglycan induced arthritis 3 (mouse)Not determined767290094101290240Mouse
1301784Ses2_msalmonella enteritidis susceptibility 2 (mouse)Not determined767290094101290240Mouse
1300620Pgia21_mproteoglycan induced arthritis 21 (mouse)Not determined767290094101290240Mouse
26884418Bzwq7_mbi-zygomatic width QTL 7, 10 week (mouse)767849748105449207Mouse
27226715Metcl3_mmetatarsal-calcaneal length 3, 5 week (mouse)767849748119499223Mouse
26884444Sklq8_mskull length QTL 8, 10 week (mouse)767849748124199223Mouse
26884451Sklq14_mskull length QTL 14, 16 week (mouse)767849748124999172Mouse
1300654Bomd1_mbone mineral density 1 (mouse)Not determined768365595102365702Mouse
27095907Scvln4_msacral vertebrae length 2, 5 week (mouse)769949748120499223Mouse
1301155Bpq7_mblood pressure QTL 7 (mouse)Not determined770143137104143379Mouse
10043973Obq29_mobesity QTL 29 (mouse)Not determined772263372106263372Mouse
4142319Powg_mpost-ovarectomy weight gain (mouse)Not determined7285710592582163Mouse
27095910Pglq13_mpelvic girdle length QTL 13, 16 week (mouse)773049748125699172Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
11553869Stmm2b_mskin tumor modifier of MSM 2a (mouse)773725965107725965Mouse
4142212Png1_mPostnatal growth 1 (mouse)Not determined7432612192394346Mouse
27226745Metcl9_mmetatarsal-calcaneal length 9, 10 week (mouse)774849748122199223Mouse
27226781Tibl3_mtibia length 3, 5 week (mouse)774849748122199223Mouse
1301566Adip3_madiposity 3 (mouse)Not determined775394215109394346Mouse
14746989Manh62_mmandible shape 62 (mouse)775742528109742528Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse
10412110Cctq1_mcentral corneal thickness QTL 1 (mouse)Not determined780551681114551791Mouse
4142500Morq1_mmodifier of Rs1 QTL 1 (mouse)Not determined80551681114551791Mouse
27095930Ulnl10_mulna length 10, 16 week (mouse)780849748126699172Mouse
27095923Pglq3_mpelvic girdle length QTL 3, 5 week (mouse)781249748124199223Mouse
27095903Scvln10_msacral vertebrae length 2, 10 week (mouse)781449748126499172Mouse
27226765Tibl18_mtibia length 18, 16 week (mouse)781849748126499172Mouse
27226763Feml20_mfemur length 20, 16 week (mouse)785049208124199223Mouse
1301997Cia7_mcollagen induced arthritis QTL 7 (mouse)Not determined785365595112533819Mouse
27226792Feml7_mfemur length 7, 5 week (mouse)78614920898949207Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001105188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC138674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000164996   ⟹   ENSMUSP00000129540
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl786,444,349 - 86,461,240 (+)Ensembl
GRCm38.p6 Ensembl786,795,141 - 86,812,032 (+)Ensembl
RefSeq Acc Id: ENSMUST00000232688   ⟹   ENSMUSP00000156969
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl786,444,235 - 86,464,348 (+)Ensembl
GRCm38.p6 Ensembl786,795,027 - 86,815,140 (+)Ensembl
RefSeq Acc Id: ENSMUST00000233099   ⟹   ENSMUSP00000156630
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl786,444,235 - 86,464,348 (+)Ensembl
GRCm38.p6 Ensembl786,795,027 - 86,815,140 (+)Ensembl
RefSeq Acc Id: ENSMUST00000233167   ⟹   ENSMUSP00000156425
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl786,444,235 - 86,464,348 (+)Ensembl
GRCm38.p6 Ensembl786,795,027 - 86,815,140 (+)Ensembl
RefSeq Acc Id: NM_001105188   ⟹   NP_001098658
RefSeq Status: INFERRED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39786,444,349 - 86,461,240 (+)NCBI
GRCm38786,795,141 - 86,812,032 (+)ENTREZGENE
MGSCv37793,943,651 - 93,960,542 (+)RGD
Celera784,170,537 - 84,187,407 (+)RGD
cM Map7 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001098658 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000129540
  ENSMUSP00000129540.2
  ENSMUSP00000156425.2
  ENSMUSP00000156630.2
  ENSMUSP00000156969.2
Reference Protein Sequences
RefSeq Acc Id: NP_001098658   ⟸   NM_001105188
- Peptide Label: precursor
- UniProtKB: L7N2B7 (UniProtKB/TrEMBL),   A0A3B2WB15 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000129540   ⟸   ENSMUST00000164996
RefSeq Acc Id: ENSMUSP00000156630   ⟸   ENSMUST00000233099
RefSeq Acc Id: ENSMUSP00000156425   ⟸   ENSMUST00000233167
RefSeq Acc Id: ENSMUSP00000156969   ⟸   ENSMUST00000232688
Protein Domains
G-protein coupled receptors family 3 profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-L7N2B7-F1-model_v2 AlphaFold L7N2B7 1-854 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3643879 AgrOrtholog
Ensembl Genes ENSMUSG00000090949 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000164996 ENTREZGENE
  ENSMUST00000164996.2 UniProtKB/TrEMBL
  ENSMUST00000232688.2 UniProtKB/TrEMBL
  ENSMUST00000233099.2 UniProtKB/TrEMBL
  ENSMUST00000233167.2 UniProtKB/TrEMBL
Gene3D-CATH 2.10.50.30 UniProtKB/TrEMBL
  3.40.50.2300 UniProtKB/TrEMBL
InterPro ANF_lig-bd_rcpt UniProtKB/TrEMBL
  GPCR_3 UniProtKB/TrEMBL
  GPCR_3_9-Cys_dom UniProtKB/TrEMBL
  GPCR_3_9-Cys_sf UniProtKB/TrEMBL
  GPCR_3_C UniProtKB/TrEMBL
  GPCR_3_Ca_sens_rcpt-rel UniProtKB/TrEMBL
  GPCR_3_vmron_rcpt_2 UniProtKB/TrEMBL
  Peripla_BP_I UniProtKB/TrEMBL
KEGG Report mmu:546983 UniProtKB/TrEMBL
MGD MGI:3643879 ENTREZGENE
NCBI Gene 546983 ENTREZGENE
PANTHER PTHR24061 UniProtKB/TrEMBL
  VOMERONASAL 2, RECEPTOR 66-RELATED UniProtKB/TrEMBL
Pfam 7tm_3 UniProtKB/TrEMBL
  ANF_receptor UniProtKB/TrEMBL
  NCD3G UniProtKB/TrEMBL
PhenoGen Vmn2r77 PhenoGen
PRINTS GPCRMGR UniProtKB/TrEMBL
  VOMERONASL2R UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F3_4 UniProtKB/TrEMBL
Superfamily-SCOP SSF53822 UniProtKB/TrEMBL
UniProt A0A3B2WAN2_MOUSE UniProtKB/TrEMBL
  A0A3B2WB15 ENTREZGENE, UniProtKB/TrEMBL
  A0A3B2WBM5_MOUSE UniProtKB/TrEMBL
  L7N2B7 ENTREZGENE, UniProtKB/TrEMBL