Rundc3b (RUN domain containing 3B)

Gene: Rundc3b (RUN domain containing 3B) Mus musculus

Analyze

Symbol:

Rundc3b

Name:

RUN domain containing 3B

RGD ID:

1615644

MGI Page

MGI

Description:

Orthologous to human RUNDC3B (RUN domain containing 3B).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Gm440; MGC68340; RUN domain-containing protein 3B

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RUNDC3B (RUN domain containing 3B)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Rundc3b (RUN domain containing 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rundc3b (RUN domain containing 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RUNDC3B (RUN domain containing 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RUNDC3B (RUN domain containing 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rundc3b (RUN domain containing 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RUNDC3B (RUN domain containing 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RUNDC3B (RUN domain containing 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rundc3b (RUN domain containing 3B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Rundc3b (RUN domain containing 3B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	RUNDC3B (RUN domain containing 3B)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rundc3b (RUN domain containing 3b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rundc3b	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	8,540,336 - 8,673,079 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	8,540,334 - 8,672,952 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	8,490,336 - 8,623,084 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	8,490,334 - 8,622,952 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	8,490,336 - 8,622,952 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	8,496,342 - 8,628,958 (-)	NCBI		MGSCv36	mm8
Celera	5	8,410,690 - 8,543,386 (-)	NCBI		Celera
Cytogenetic Map	5	A1	NCBI
cM Map	5	3.43	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

pleomorphic xanthoastrocytoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (EXP)

1,2-dimethylhydrazine (EXP)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

4-hydroxyphenyl retinamide (EXP)

acetamide (ISO)

aflatoxin B1 (EXP,ISO)

all-trans-retinoic acid (ISO)

benzo[a]pyrene (EXP,ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

CGP 52608 (ISO)

chromium(6+) (EXP)

copper(II) sulfate (ISO)

coumarin (ISO)

coumestrol (ISO)

cyclosporin A (ISO)

dioxygen (EXP)

dorsomorphin (ISO)

Enterolactone (ISO)

ethanol (EXP)

folic acid (EXP)

fonofos (ISO)

formaldehyde (ISO)

lead diacetate (EXP)

mercury dibromide (ISO)

methylmercury chloride (ISO)

N-nitrosodiethylamine (EXP)

nickel atom (ISO)

O-methyleugenol (ISO)

p-chloromercuribenzoic acid (ISO)

paracetamol (ISO)

paraquat (EXP)

parathion (ISO)

perfluorooctane-1-sulfonic acid (EXP)

potassium chromate (ISO)

progesterone (EXP)

quercetin (ISO)

SB 431542 (ISO)

sunitinib (ISO)

temozolomide (ISO)

terbufos (ISO)

tetrachloromethane (ISO)

trichostatin A (ISO)

trimellitic anhydride (EXP)

valproic acid (ISO)

vitamin E (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

Cellular Component

cellular_component (ND)

Molecular Function

molecular_function (ND)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal eye anterior chamber depth (IEA)

decreased total retina thickness (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:16141072	PMID:16141073	PMID:21677750	PMID:32560809

Genomics

Comparative Map Data

Rundc3b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	8,540,336 - 8,673,079 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	8,540,334 - 8,672,952 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	8,490,336 - 8,623,084 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	8,490,334 - 8,622,952 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	8,490,336 - 8,622,952 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	8,496,342 - 8,628,958 (-)	NCBI		MGSCv36	mm8
Celera	5	8,410,690 - 8,543,386 (-)	NCBI		Celera
Cytogenetic Map	5	A1	NCBI
cM Map	5	3.43	NCBI

RUNDC3B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	87,628,398 - 87,832,296 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	87,627,548 - 87,832,296 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	87,257,714 - 87,461,611 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	87,095,665 - 87,297,691 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	7	81,962,343 - 82,166,173 (+)	NCBI		Celera
Cytogenetic Map	7	q21.12	NCBI
HuRef	7	81,867,579 - 82,071,542 (+)	NCBI		HuRef
CHM1_1	7	87,187,835 - 87,391,791 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	88,878,278 - 89,082,221 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	86,589,043 - 86,792,931 (+)	NCBI

Rundc3b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	26,417,501 - 26,554,404 (+)	NCBI		GRCr8
mRatBN7.2	4	25,462,543 - 25,599,477 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	25,462,752 - 25,599,471 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	30,458,137 - 30,587,351 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	26,384,375 - 26,513,583 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	24,758,304 - 24,887,472 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	22,443,727 - 22,589,526 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	22,445,414 - 22,586,689 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	22,380,390 - 22,518,353 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	21,546,162 - 21,689,813 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	4	20,954,615 - 21,085,289 (+)	NCBI		Celera
Cytogenetic Map	4	q12	NCBI

Rundc3b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955432	5,032,468 - 5,186,820 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955432	5,032,468 - 5,186,402 (+)	NCBI	ChiLan1.0	ChiLan1.0

RUNDC3B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	105,505,965 - 105,713,961 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	153,770,603 - 153,978,599 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	79,621,222 - 79,829,021 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	93,270,709 - 93,477,463 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	93,270,747 - 93,477,463 (+)	Ensembl	panpan1.1		panPan2

RUNDC3B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	13,764,583 - 13,932,978 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	13,803,576 - 14,019,704 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	13,356,985 - 13,504,772 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	13,549,867 - 13,697,960 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	14	13,549,867 - 13,697,578 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	14	13,733,175 - 13,901,620 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	13,458,776 - 13,627,233 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	13,742,371 - 13,911,298 (+)	NCBI		UU_Cfam_GSD_1.0

Rundc3b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	26,887,399 - 26,939,764 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936763	1,052,778 - 1,193,629 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936763	1,052,229 - 1,193,908 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RUNDC3B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	92,528,662 - 92,823,561 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	92,525,589 - 92,823,574 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	101,967,854 - 102,119,244 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RUNDC3B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	61,119,131 - 61,296,687 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	61,121,388 - 61,296,800 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666042	42,773,392 - 42,956,392 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rundc3b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624809	5,560,661 - 5,741,546 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624809	5,565,197 - 5,741,425 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Rundc3b
3298 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	589
Count of miRNA genes:	412
Interacting mature miRNAs:	463
Transcripts:	ENSMUST00000047485, ENSMUST00000115378
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4141234	Pbwg14_m	postnatal body weight growth 14 (mouse)			Not determined		5	1	21273552	Mouse
1301468	Eye1_m	eye weight 1 (mouse)			Not determined		5	1	21929650	Mouse
10412081	Bwq13_m	body weight QTL 13 (mouse)			Not determined		5	1	23606323	Mouse
12904958	Gmmq8_m	gastrocnemius muscle mass QTL 8 (mouse)					5	1	29421124	Mouse
10401122	Pgia41_m	proteoglycan induced arthritis 41 (mouse)			Not determined		5	823144	34823280	Mouse
12738412	Lfibq4_m	liver fibrosis QTL 4 (mouse)					5	3150000	20799180	Mouse
15039371	Nmrs21_m	NAFLD-associated magnetic resonance shift 21 (mouse)					5	3504823	37504823	Mouse
13442491	Mecth1_m	mechanosensation threshold 1 (mouse)					5	4518000	19834998	Mouse
1301806	Actd2_m	activity-distance traveled 2 (mouse)			Not determined		5	5384520	39384652	Mouse
4141207	Imrfq1_m	immune response to Factor IX QTL 1 (mouse)			Not determined		5	8124117	42124239	Mouse

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001347311	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001359961	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_198620	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006503578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC107733	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC121955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC152165	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK031895	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC056181	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC057375	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC058808	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000047485 ⟹ ENSMUSP00000040108

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	8,540,334 - 8,672,952 (-)	Ensembl
GRCm38.p6 Ensembl	5	8,490,334 - 8,622,952 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000115378 ⟹ ENSMUSP00000111036

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	8,542,267 - 8,672,952 (-)	Ensembl
GRCm38.p6 Ensembl	5	8,492,267 - 8,622,952 (-)	Ensembl

RefSeq Acc Id:

NM_001347311 ⟹ NP_001334240

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	8,540,336 - 8,672,952 (-)	NCBI
GRCm38	5	8,490,336 - 8,622,952 (-)	NCBI

Sequence:

show sequence

CGGAGCCCGCCCTCCCGCCCGCCCGCCCGCGCGCGCTTCTCTCGTGGACGGCGGCGGCGGCGCG
CGCGCGCGCGAGCGAGGGTGGAGGTGGCTCGTGCGTGCGTGTGAGTGAGCGCGTGTGTATGTGT
GAGAGAGCGTGTGTGAGTGTGTGTGCACGCGCGCGTGGAGCCTGGGTACCGGTGCCCGACTGAC
TGCCTTCCACACCCTGCCTACTCCGCGCCTCCTTCCTCGCCTCTCTCCCGCCCGGCGGGCTGCC
ATCGTTGAGAGAAGGCCGGGGGACACAGGTGTGCGAGGCTTGCGGGACCGCTGGAGACAAAGGG
GGCGCGGAGGTGAGCCCGCCATGGCCTCCCGGAGCCTGGGGGGCCTGAGCGGGAGCCGCGGCGG
CGGCGGCGGCGGCGGCGGCAAGAAGAGCCTGAGCGCCCGCAACGCTGCGGTGGAGAGGAGGAAC
CTGATCACCGTGTGCAGATTTTCTGTGAAGACCCTGATTGATCGGTCTTGCTTTGAAACAATTG
ATGATTCATCTCCTGAATTTAATAACTTTGCAGCTGTTCTGGAACAAATTCTAAGTCACCGGCT
AAAAGGTCAAGTAACATGGTTTGGCTATGAAAGCCCACGTAGCTTCTGGGACTATATCAGAGTG
GCTTGCCGGAAAGTTTCACAAAACTGTATCTGTAGTATTGAAAATATGGAAAATGTCAGCTCCT
CCAGAGCTAAGGGTAGAGCCTGGATCAGAGTAGCACTCATGGAAAAACATTTGTCTGAATACAT
CTCTACAGCTTTGAGAGACTTCAAAACAACCAGGAGGTTTTATGAAGATGGAGCCATTGTCTTG
GGTGAAGAAGCAAATATGCTTGCTGGCATGCTGCTTGGACTCAATGCTATTGACTTCAGCTTCT
GCCTAAAGGGAGAAGGATTAGATGGCACCTTCCCTGCTGTGATAGACTATACACCATATTTGAA
GTTTGAACAAAGTTCTGACAGCATCAGCAGTGACGAGGAGGAACTCAGGACGTTTGGGAGCAGT
GACAGTGAGAGCAGCACCCCAGAGAATGTGGGACCGCCTCTCATCCTAGACGAGAACACCTGGT
TCAACAAGTGCAAGAGAGTAAGGCAGAAATACCAGCTTACCCTGGAGCAGAAGGGTTATCTTGA
AGAACTCTTGCGGCTTCGTGAGAACCAACTTTCTGAATCTGTCTCTCAGAATAAAATCCTACTT
CAGAGGATCGAAGATTCTGATCTGGCCCACAAATTGGAGAAAGAACAGTTAGAATATATCATTG
TGGAGCTTCAAGATCAGCTGACTGTACTAAAGAATAATGATTTAAGATCAAGACAAGAGTTAAC
TGCCCACCTCACCAAGCAGTGGCCCTCCCCAGGAGCTCTGGATGTCAATGCTGTTGCCTTGGAT
ACCTTGCTTTACCGAAAACACAATAAACAGTGGTATGATAAAAGTTACCAAAGCCTTGACCAGT
TATCAGCAGAAGTTAGCCTTTCTCAGGCCTCATTGGATCCCAGCCACTCACAAGAAGGAGATGG
AAAGCAAGACTCATTGAATTTCATTGGTGAAGGTAAAGAAGATACCCCCTCACTTCTTGGCCTC
TGTGGGTCCCTGACATCAGTGGCAAGTTACAAGTCCCTAACAAGCCTAAAATCCAACGACTGCC
TTGCAAGCCCCACCACGGAGCTAACCAGCCCAGGCCTGACTCCATCCTGAAAGACTACGTAAAA
ACCCAAAGTTTCTGCATTGTAAATATCCTGTTTACATAAGTTTGGCTGCTGGGAGATTTTGAAA
TTTTATATTCTGGTACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAAT
TTCTGAGGGAAAAGCATAGTAGTCCCCTATTTTTCTTTTTAAAATATTACATTTGTCACTGAGG
ATGTTTAAAGTTGATTAGGCTTTAAAAATCTTTCAAAGAGTGTCTGAATTCATTATAAATTGTA
CATAGTTGTTATTCAGCTGAATTTTTATATTTGTTTAAATGCGTCTTGGTGTCCAGAGACCAGG
TCCAGGTTTTACTCCAGAGACTTAAGCTTAGCAGTTTCTTTCGCTCCTTTATTTGGTGGTTAAA
TTTGCACAAAAGGCAACTAATTCCATGAAGTACTTCCTGCACTCTGATGTCTGTGTACCATGCT
GTAAGGGGAAGTCTCCAGCCACAACTACACAGTGGCTCGTTAAGCTTTCCTTTTACCAGTTGGT
ACCAACTTTTAGCATTTCATAAAGTTTGTAGAATTGTGCCTTTTTAGGCGGTTGCTGACTTAAT
TTGTCAGGTATGGAGGAAAAGCATCTTTTCCCAGGTATGCCTAAGACATTGGAAACATTTCAAA
CTTCAGAACTAATGTTGGCAAGGGGTTACTAACCTCAGAAGTTTCCAGTTTAATGAATGACTTG
ATAATGATTTTTAAAGAGCTGCAGAGTAACCAGGATGTCTGACTGTGGATATACATTGGAGCTA
CAATGCTATTTTCCCTGTGTGCAACAATGACTTACATACTGGGTGTTTCATAGCCATTACCACT
ATGCCATGATTTCTCATTTTTCAAATTGATCTTAGTGTTTAAAAAAAAACAAAACTATACTTCT
GTAGGAAAACAGGTTTTTTAAAAAGAGCTGTGTTTCAATTTTTTTTTTTACAATTTTTAAAACA
GCTACATGTGTCCCTAAAAATTCCACCCTATTGAAAATAAACACGTATGAAGTGTGTATTCTAT
AGTGAGTCCTAGGAGGAAAACAAGTGTGCCAAAGACATTTCCTATACTGTTTCATGAAGGGGCC
ACAGTGCTCACTCTTGTCTGTTGATTTTTATATTTAAACTTAGCAGCTGTGACAAGTAGGAAGT
GCATCCCTCCTAAAGCTTCCTGGGGAGTGCTGAACTCACAGGTTCACTCCTTCTATCCAAAGTG
TAGGGGTGGGAGGTTCTGGGAAGTGCTTGGAGCGCAGTCTCATGGTGTGGAATCAATCAATAGT
AACATGACCAGTGTCACATGTGAGGCAGTGCAGACACTAATCTCTGGGGCAAAGGAGGCCTGCA
AGCTCATGACAGACATTGCATCGGGTGACTCAGAACAAACTGAGCAATTTCTTCCTGAGGCTGA
TGCATTAAAACAGAGCACCTCCATCTTCTCTGATCTGTGTGCACCATATTAAGTGTACAGTGGC
CAAAGCCACGTTTAAGTAGTGTCAGGAATAGCAAATAAAGACAGCAGGCCTGCAGCAGGCTGCA
TGAGGACTTAGATGGTCATGAGAACATTGGGAATTTAGGCTGGCCGTGGGCGCACCTCTACTTT
CCTAAGAAAGTCAAAGTGTTTACTGCTTTATCACCACGGCCTGCTCTCACCTGTCATTTATGAT
TTTTCAGATATAAAACCTTGGTAAGATCTTTTCATACATTTTTATAAAGTAGAAGGGAATACAA
GATTCCCCAGTTGGTACACTTTTTCAGATCTGTCCGATAGAAGCACTAGTTTGTGACATATCCC
TGCTGCGAACTGCGGACTGAGACATGACACCTGAGGATCATGGCTTTCCCTCCATTATTGGAGC
TCTTGATATAAAGTTCATCTGCTACTGTGGAACCCAAGTTTCTGCAGTTGGTTTCGAGCTACAG
GCAGTTTGTAACGCTTGCATGAGTGAACAGTGTCTCAGTCTTTAATTTTCAGTGGTACTGTTTA
TTTTTCAGAACTCCACAAAGAATGCTGGCTATGTCTATCTTTCCATCTGTATTTTGTTGCCTCG
ATGTACTATATTTGTTGCATGTATATTAAAGATTTTTTTAACCATA

hide sequence

RefSeq Acc Id:

NM_001359961 ⟹ NP_001346890

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	8,540,336 - 8,672,952 (-)	NCBI
GRCm38	5	8,490,336 - 8,622,952 (-)	NCBI

Sequence:

show sequence

CGGAGCCCGCCCTCCCGCCCGCCCGCCCGCGCGCGCTTCTCTCGTGGACGGCGGCGGCGGCGCG
CGCGCGCGCGAGCGAGGGTGGAGGTGGCTCGTGCGTGCGTGTGAGTGAGCGCGTGTGTATGTGT
GAGAGAGCGTGTGTGAGTGTGTGTGCACGCGCGCGTGGAGCCTGGGTACCGGTGCCCGACTGAC
TGCCTTCCACACCCTGCCTACTCCGCGCCTCCTTCCTCGCCTCTCTCCCGCCCGGCGGGCTGCC
ATCGTTGAGAGAAGGCCGGGGGACACAGGTGTGCGAGGCTTGCGGGACCGCTGGAGACAAAGGG
GGCGCGGAGGTGAGCCCGCCATGGCCTCCCGGAGCCTGGGGGGCCTGAGCGGGAGCCGCGGCGG
CGGCGGCGGCGGCGGCGGCAAGAAGAGCCTGAGCGCCCGCAACGCTGCGGTGGAGAGGAGGAAC
CTGATCACCGTGTGCAGATTTTCTGTGAAGACCCTGATTGATCGGTCTTGCTTTGAAACAATTG
ATGATTCATCTCCTGAATTTAATAACTTTGCAGCTGTTCTGGAACAAATTCTAAGTCACCGGCT
AAAAGGTCAAGTAACATGGTTTGGCTATGAAAGCCCACGTAGCTTCTGGGACTATATCAGAGTG
GCTTGCCGGAAAGTTTCACAAAACTGTATCTGTAGTATTGAAAATATGGAAAATGTCAGCTCCT
CCAGAGCTAAGGGTAGAGCCTGGATCAGAGTAGCACTCATGGAAAAACATTTGTCTGAATACAT
CTCTACAGCTTTGAGAGACTTCAAAACAACCAGGAGGTTTTATGAAGATGGAGCCATTGTCTTG
GGTGAAGAAGCAAATATGCTTGCTGGCATGCTGCTTGGACTCAATGCTATTGACTTCAGCTTCT
GCCTAAAGGGAGAAGGATTAGATGGCACCTTCCCTGCTGTGATAGACTATACACCATATTTGAA
GTTTGAACAAAGTTCTGACAGCATCAGCAGTGACGAGGAGGAACTCAGGACGTTTGGGAGCAGT
GACAGTGAGAGCAGCACCCCAGAGAATGTGGGACCGCCTCTCATCCTAGACGAGAACACCTGGT
TCAACAAGTGCAAGAGAGTAAGGCAGAAATACCAGCTTACCCTGGAGCAGAAGGGTTATCTTGA
AGAACTCTTGCGGCTTCGTGAGAACCAACTTTCTGAATCTGTCTCTCAGAATAAAATCCTACTT
CAGAGGATCGAAGATTCTGATCTGGCCCACAAATTGGAGAAAGAACAGTTAGAATATATCATTG
TGGAGCTTCAAGATCAGCTGTAAAGAAGATACCCCCTCACTTCTTGGCCTCTGTGGGTCCCTGA
CATCAGTGGCAAGTTACAAGTCCCTAACAAGCCTAAAATCCAACGACTGCCTTGCAAGCCCCAC
CACGGAGCTAACCAGCCCAGGCCTGACTCCATCCTGAAAGACTACGTAAAAACCCAAAGTTTCT
GCATTGTAAATATCCTGTTTACATAAGTTTGGCTGCTGGGAGATTTTGAAATTTTATATTCTGG
TACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAAAA
GCATAGTAGTCCCCTATTTTTCTTTTTAAAATATTACATTTGTCACTGAGGATGTTTAAAGTTG
ATTAGGCTTTAAAAATCTTTCAAAGAGTGTCTGAATTCATTATAAATTGTACATAGTTGTTATT
CAGCTGAATTTTTATATTTGTTTAAATGCGTCTTGGTGTCCAGAGACCAGGTCCAGGTTTTACT
CCAGAGACTTAAGCTTAGCAGTTTCTTTCGCTCCTTTATTTGGTGGTTAAATTTGCACAAAAGG
CAACTAATTCCATGAAGTACTTCCTGCACTCTGATGTCTGTGTACCATGCTGTAAGGGGAAGTC
TCCAGCCACAACTACACAGTGGCTCGTTAAGCTTTCCTTTTACCAGTTGGTACCAACTTTTAGC
ATTTCATAAAGTTTGTAGAATTGTGCCTTTTTAGGCGGTTGCTGACTTAATTTGTCAGGTATGG
AGGAAAAGCATCTTTTCCCAGGTATGCCTAAGACATTGGAAACATTTCAAACTTCAGAACTAAT
GTTGGCAAGGGGTTACTAACCTCAGAAGTTTCCAGTTTAATGAATGACTTGATAATGATTTTTA
AAGAGCTGCAGAGTAACCAGGATGTCTGACTGTGGATATACATTGGAGCTACAATGCTATTTTC
CCTGTGTGCAACAATGACTTACATACTGGGTGTTTCATAGCCATTACCACTATGCCATGATTTC
TCATTTTTCAAATTGATCTTAGTGTTTAAAAAAAAACAAAACTATACTTCTGTAGGAAAACAGG
TTTTTTAAAAAGAGCTGTGTTTCAATTTTTTTTTTTACAATTTTTAAAACAGCTACATGTGTCC
CTAAAAATTCCACCCTATTGAAAATAAACACGTATGAAGTGTGTATTCTATAGTGAGTCCTAGG
AGGAAAACAAGTGTGCCAAAGACATTTCCTATACTGTTTCATGAAGGGGCCACAGTGCTCACTC
TTGTCTGTTGATTTTTATATTTAAACTTAGCAGCTGTGACAAGTAGGAAGTGCATCCCTCCTAA
AGCTTCCTGGGGAGTGCTGAACTCACAGGTTCACTCCTTCTATCCAAAGTGTAGGGGTGGGAGG
TTCTGGGAAGTGCTTGGAGCGCAGTCTCATGGTGTGGAATCAATCAATAGTAACATGACCAGTG
TCACATGTGAGGCAGTGCAGACACTAATCTCTGGGGCAAAGGAGGCCTGCAAGCTCATGACAGA
CATTGCATCGGGTGACTCAGAACAAACTGAGCAATTTCTTCCTGAGGCTGATGCATTAAAACAG
AGCACCTCCATCTTCTCTGATCTGTGTGCACCATATTAAGTGTACAGTGGCCAAAGCCACGTTT
AAGTAGTGTCAGGAATAGCAAATAAAGACAGCAGGCCTGCAGCAGGCTGCATGAGGACTTAGAT
GGTCATGAGAACATTGGGAATTTAGGCTGGCCGTGGGCGCACCTCTACTTTCCTAAGAAAGTCA
AAGTGTTTACTGCTTTATCACCACGGCCTGCTCTCACCTGTCATTTATGATTTTTCAGATATAA
AACCTTGGTAAGATCTTTTCATACATTTTTATAAAGTAGAAGGGAATACAAGATTCCCCAGTTG
GTACACTTTTTCAGATCTGTCCGATAGAAGCACTAGTTTGTGACATATCCCTGCTGCGAACTGC
GGACTGAGACATGACACCTGAGGATCATGGCTTTCCCTCCATTATTGGAGCTCTTGATATAAAG
TTCATCTGCTACTGTGGAACCCAAGTTTCTGCAGTTGGTTTCGAGCTACAGGCAGTTTGTAACG
CTTGCATGAGTGAACAGTGTCTCAGTCTTTAATTTTCAGTGGTACTGTTTATTTTTCAGAACTC
CACAAAGAATGCTGGCTATGTCTATCTTTCCATCTGTATTTTGTTGCCTCGATGTACTATATTT
GTTGCATGTATATTAAAGATTTTTTTAACCATA

hide sequence

RefSeq Acc Id:

NM_198620 ⟹ NP_941022

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	8,540,336 - 8,672,952 (-)	NCBI
GRCm38	5	8,490,336 - 8,622,952 (-)	NCBI
MGSCv37	5	8,490,336 - 8,622,952 (-)	RGD
Celera	5	8,410,690 - 8,543,386 (-)	RGD
cM Map	5		ENTREZGENE

Sequence:

show sequence

CGGAGCCCGCCCTCCCGCCCGCCCGCCCGCGCGCGCTTCTCTCGTGGACGGCGGCGGCGGCGCG
CGCGCGCGCGAGCGAGGGTGGAGGTGGCTCGTGCGTGCGTGTGAGTGAGCGCGTGTGTATGTGT
GAGAGAGCGTGTGTGAGTGTGTGTGCACGCGCGCGTGGAGCCTGGGTACCGGTGCCCGACTGAC
TGCCTTCCACACCCTGCCTACTCCGCGCCTCCTTCCTCGCCTCTCTCCCGCCCGGCGGGCTGCC
ATCGTTGAGAGAAGGCCGGGGGACACAGGTGTGCGAGGCTTGCGGGACCGCTGGAGACAAAGGG
GGCGCGGAGGTGAGCCCGCCATGGCCTCCCGGAGCCTGGGGGGCCTGAGCGGGAGCCGCGGCGG
CGGCGGCGGCGGCGGCGGCAAGAAGAGCCTGAGCGCCCGCAACGCTGCGGTGGAGAGGAGGAAC
CTGATCACCGTGTGCAGATTTTCTGTGAAGACCCTGATTGATCGGTCTTGCTTTGAAACAATTG
ATGATTCATCTCCTGAATTTAATAACTTTGCAGCTGTTCTGGAACAAATTCTAAGTCACCGGCT
AAAAGGTCAAGTAACATGGTTTGGCTATGAAAGCCCACGTAGCTTCTGGGACTATATCAGAGTG
GCTTGCCGGAAAGTTTCACAAAACTGTATCTGTAGTATTGAAAATATGGAAAATGTCAGCTCCT
CCAGAGCTAAGGGTAGAGCCTGGATCAGAGTAGCACTCATGGAAAAACATTTGTCTGAATACAT
CTCTACAGCTTTGAGAGACTTCAAAACAACCAGGAGGTTTTATGAAGATGGAGCCATTGTCTTG
GGTGAAGAAGCAAATATGCTTGCTGGCATGCTGCTTGGACTCAATGCTATTGACTTCAGCTTCT
GCCTAAAGGGAGAAGGATTAGATGGCACCTTCCCTGCTGTGATAGACTATACACCATATTTGAA
GTTTGAACAAAGTTCTGACAGCATCAGCAGTGACGAGGAGGAACTCAGGACGTTTGGGAGCAGT
GACAGTGAGAGCAGCACCCCAGAGAATGTGGGACCGCCTCTCATCCTAGACGAGAACACCTGGT
TCAACAAGTGCAAGAGAGTAAGGCAGAAATACCAGCTTACCCTGGAGCAGAAGGGTTATCTTGA
AGAACTCTTGCGGCTTCGTGAGAACCAACTTTCTGAATCTGTCTCTCAGAATAAAATCCTACTT
CAGAGGATCGAAGATTCTGATCTGGCCCACAAATTGGAGAAAGAACAGTTAGAATATATCATTG
TGGAGCTTCAAGATCAGCTTAAAAGTTACCAAAGCCTTGACCAGTTATCAGCAGAAGTTAGCCT
TTCTCAGGCCTCATTGGATCCCAGCCACTCACAAGAAGGAGATGGAAAGCAAGACTCATTGAAT
TTCATTGGTGAAGGTAAAGAAGATACCCCCTCACTTCTTGGCCTCTGTGGGTCCCTGACATCAG
TGGCAAGTTACAAGTCCCTAACAAGCCTAAAATCCAACGACTGCCTTGCAAGCCCCACCACGGA
GCTAACCAGCCCAGGCCTGACTCCATCCTGAAAGACTACGTAAAAACCCAAAGTTTCTGCATTG
TAAATATCCTGTTTACATAAGTTTGGCTGCTGGGAGATTTTGAAATTTTATATTCTGGTACATG
CGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAAAAGCATAG
TAGTCCCCTATTTTTCTTTTTAAAATATTACATTTGTCACTGAGGATGTTTAAAGTTGATTAGG
CTTTAAAAATCTTTCAAAGAGTGTCTGAATTCATTATAAATTGTACATAGTTGTTATTCAGCTG
AATTTTTATATTTGTTTAAATGCGTCTTGGTGTCCAGAGACCAGGTCCAGGTTTTACTCCAGAG
ACTTAAGCTTAGCAGTTTCTTTCGCTCCTTTATTTGGTGGTTAAATTTGCACAAAAGGCAACTA
ATTCCATGAAGTACTTCCTGCACTCTGATGTCTGTGTACCATGCTGTAAGGGGAAGTCTCCAGC
CACAACTACACAGTGGCTCGTTAAGCTTTCCTTTTACCAGTTGGTACCAACTTTTAGCATTTCA
TAAAGTTTGTAGAATTGTGCCTTTTTAGGCGGTTGCTGACTTAATTTGTCAGGTATGGAGGAAA
AGCATCTTTTCCCAGGTATGCCTAAGACATTGGAAACATTTCAAACTTCAGAACTAATGTTGGC
AAGGGGTTACTAACCTCAGAAGTTTCCAGTTTAATGAATGACTTGATAATGATTTTTAAAGAGC
TGCAGAGTAACCAGGATGTCTGACTGTGGATATACATTGGAGCTACAATGCTATTTTCCCTGTG
TGCAACAATGACTTACATACTGGGTGTTTCATAGCCATTACCACTATGCCATGATTTCTCATTT
TTCAAATTGATCTTAGTGTTTAAAAAAAAACAAAACTATACTTCTGTAGGAAAACAGGTTTTTT
AAAAAGAGCTGTGTTTCAATTTTTTTTTTTACAATTTTTAAAACAGCTACATGTGTCCCTAAAA
ATTCCACCCTATTGAAAATAAACACGTATGAAGTGTGTATTCTATAGTGAGTCCTAGGAGGAAA
ACAAGTGTGCCAAAGACATTTCCTATACTGTTTCATGAAGGGGCCACAGTGCTCACTCTTGTCT
GTTGATTTTTATATTTAAACTTAGCAGCTGTGACAAGTAGGAAGTGCATCCCTCCTAAAGCTTC
CTGGGGAGTGCTGAACTCACAGGTTCACTCCTTCTATCCAAAGTGTAGGGGTGGGAGGTTCTGG
GAAGTGCTTGGAGCGCAGTCTCATGGTGTGGAATCAATCAATAGTAACATGACCAGTGTCACAT
GTGAGGCAGTGCAGACACTAATCTCTGGGGCAAAGGAGGCCTGCAAGCTCATGACAGACATTGC
ATCGGGTGACTCAGAACAAACTGAGCAATTTCTTCCTGAGGCTGATGCATTAAAACAGAGCACC
TCCATCTTCTCTGATCTGTGTGCACCATATTAAGTGTACAGTGGCCAAAGCCACGTTTAAGTAG
TGTCAGGAATAGCAAATAAAGACAGCAGGCCTGCAGCAGGCTGCATGAGGACTTAGATGGTCAT
GAGAACATTGGGAATTTAGGCTGGCCGTGGGCGCACCTCTACTTTCCTAAGAAAGTCAAAGTGT
TTACTGCTTTATCACCACGGCCTGCTCTCACCTGTCATTTATGATTTTTCAGATATAAAACCTT
GGTAAGATCTTTTCATACATTTTTATAAAGTAGAAGGGAATACAAGATTCCCCAGTTGGTACAC
TTTTTCAGATCTGTCCGATAGAAGCACTAGTTTGTGACATATCCCTGCTGCGAACTGCGGACTG
AGACATGACACCTGAGGATCATGGCTTTCCCTCCATTATTGGAGCTCTTGATATAAAGTTCATC
TGCTACTGTGGAACCCAAGTTTCTGCAGTTGGTTTCGAGCTACAGGCAGTTTGTAACGCTTGCA
TGAGTGAACAGTGTCTCAGTCTTTAATTTTCAGTGGTACTGTTTATTTTTCAGAACTCCACAAA
GAATGCTGGCTATGTCTATCTTTCCATCTGTATTTTGTTGCCTCGATGTACTATATTTGTTGCA
TGTATATTAAAGATTTTTTTAACCATAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006503578 ⟹ XP_006503641

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	8,540,336 - 8,673,079 (-)	NCBI
GRCm38	5	8,490,336 - 8,623,084 (-)	NCBI

Sequence:

show sequence

CTGAGTGAGACAGGCGTGGGGAGGGGGGCTTCACCTCAGCGGCTCCGCCCTGCTGGAAGAATGA
CGTGCGGTTAGGCCTGCGGGGTGACAGGCTCGCCCGGGCGCTGGTGCGGCGTCCCTGGAGACTC
GGAGCCCGCCCTCCCGCCCGCCCGCCCGCGCGCGCTTCTCTCGTGGACGGCGGCGGCGGCGCGC
GCGCGCGCGAGCGAGGGTGGAGGTGGCTCGTGCGTGCGTGTGAGTGAGCGCGTGTGTATGTGTG
AGAGAGCGTGTGTGAGTGTGTGTGCACGCGCGCGTGGAGCCTGGGTACCGGTGCCCGACTGACT
GCCTTCCACACCCTGCCTACTCCGCGCCTCCTTCCTCGCCTCTCTCCCGCCCGGCGGGCTGCCA
TCGTTGAGAGAAGGCCGGGGGACACAGGTGTGCGAGGCTTGCGGGACCGCTGGAGACAAAGGGG
GCGCGGAGGTGAGCCCGCCATGGCCTCCCGGAGCCTGGGGGGCCTGAGCGGGAGCCGCGGCGGC
GGCGGCGGCGGCGGCGGCAAGAAGAGCCTGAGCGCCCGCAACGCTGCGGTGGAGAGGAGGAACC
TGATCACCGTGTGCAGATTTTCTGTGAAGACCCTGATTGATCGGTCTTGCTTTGAAACAATTGA
TGATTCATCTCCTGAATTTAATAACTTTGCAGCTGTTCTGGAACAAATTCTAAGTCACCGGCTA
AAAGGTCAAGTAACATGGTTTGGCTATGAAAGCCCACGTAGCTTCTGGGACTATATCAGAGTGG
CTTGCCGGAAAGTTTCACAAAACTGTATCTGTAGTATTGAAAATATGGAAAATGTCAGCTCCTC
CAGAGCTAAGGGTAGAGCCTGGATCAGAGTAGCACTCATGGAAAAACATTTGTCTGAATACATC
TCTACAGCTTTGAGAGACTTCAAAACAACCAGGAGGTTTTATGAAGATGGAGCCATTGTCTTGG
GTGAAGAAGCAAATATGCTTGCTGGCATGCTGCTTGGACTCAATGCTATTGACTTCAGCTTCTG
CCTAAAGGGAGAAGGATTAGATGGCACCTTCCCTGCTGTGATAGACTATACACCATATTTGAAG
TTTGAACAAAGTTCTGACAGCATCAGCAGTGACGAGGAGGAACTCAGGACGTTTGGGAGCAGTG
ACAGTGAGAGCAGCACCCCAGAGAATGTGGGACCGCCTCTCATCCTAGACGAGAACACCTGGTT
CAACAAGTGCAAGAGAGTAAGGCAGAAATACCAGCTTACCCTGGAGCAGAAGGGTTATCTTGAA
GAACTCTTGCGGCTTCGTGAGAACCAACTTTCTGAATCTGTCTCTCAGAATAAAATCCTACTTC
AGAGGATCGAAGATTCTGATCTGGCCCACAAATTGGAGAAAGAACAGTTAGAATATATCATTGT
GGAGCTTCAAGATCAGCTGACTGTACTAAAGAATAATGATTTAAGATCAAGACAAGAGTTAACT
GCCCACCTCACCAAGCAGTGGCCCTCCCCAGGAGCTCTGGATGTCAATGCTGTTGCCTTGGATA
CCTTGCTTTACCGAAAACACAATAAACAGTGTAAAAGTTACCAAAGCCTTGACCAGTTATCAGC
AGAAGTTAGCCTTTCTCAGGCCTCATTGGATCCCAGCCACTCACAAGAAGGAGATGGAAAGCAA
GACTCATTGAATTTCATTGGTGAAGGTAAAGAAGATACCCCCTCACTTCTTGGCCTCTGTGGGT
CCCTGACATCAGTGGCAAGTTACAAGTCCCTAACAAGCCTAAAATCCAACGACTGCCTTGCAAG
CCCCACCACGGAGCTAACCAGCCCAGGCCTGACTCCATCCTGAAAGACTACGTAAAAACCCAAA
GTTTCTGCATTGTAAATATCCTGTTTACATAAGTTTGGCTGCTGGGAGATTTTGAAATTTTATA
TTCTGGTACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAG
GGAAAAGCATAGTAGTCCCCTATTTTTCTTTTTAAAATATTACATTTGTCACTGAGGATGTTTA
AAGTTGATTAGGCTTTAAAAATCTTTCAAAGAGTGTCTGAATTCATTATAAATTGTACATAGTT
GTTATTCAGCTGAATTTTTATATTTGTTTAAATGCGTCTTGGTGTCCAGAGACCAGGTCCAGGT
TTTACTCCAGAGACTTAAGCTTAGCAGTTTCTTTCGCTCCTTTATTTGGTGGTTAAATTTGCAC
AAAAGGCAACTAATTCCATGAAGTACTTCCTGCACTCTGATGTCTGTGTACCATGCTGTAAGGG
GAAGTCTCCAGCCACAACTACACAGTGGCTCGTTAAGCTTTCCTTTTACCAGTTGGTACCAACT
TTTAGCATTTCATAAAGTTTGTAGAATTGTGCCTTTTTAGGCGGTTGCTGACTTAATTTGTCAG
GTATGGAGGAAAAGCATCTTTTCCCAGGTATGCCTAAGACATTGGAAACATTTCAAACTTCAGA
ACTAATGTTGGCAAGGGGTTACTAACCTCAGAAGTTTCCAGTTTAATGAATGACTTGATAATGA
TTTTTAAAGAGCTGCAGAGTAACCAGGATGTCTGACTGTGGATATACATTGGAGCTACAATGCT
ATTTTCCCTGTGTGCAACAATGACTTACATACTGGGTGTTTCATAGCCATTACCACTATGCCAT
GATTTCTCATTTTTCAAATTGATCTTAGTGTTTAAAAAAAAACAAAACTATACTTCTGTAGGAA
AACAGGTTTTTTAAAAAGAGCTGTGTTTCAATTTTTTTTTTTACAATTTTTAAAACAGCTACAT
GTGTCCCTAAAAATTCCACCCTATTGAAAATAAACACGTATGAAGTGTGTATTCTATAGTGAGT
CCTAGGAGGAAAACAAGTGTGCCAAAGACATTTCCTATACTGTTTCATGAAGGGGCCACAGTGC
TCACTCTTGTCTGTTGATTTTTATATTTAAACTTAGCAGCTGTGACAAGTAGGAAGTGCATCCC
TCCTAAAGCTTCCTGGGGAGTGCTGAACTCACAGGTTCACTCCTTCTATCCAAAGTGTAGGGGT
GGGAGGTTCTGGGAAGTGCTTGGAGCGCAGTCTCATGGTGTGGAATCAATCAATAGTAACATGA
CCAGTGTCACATGTGAGGCAGTGCAGACACTAATCTCTGGGGCAAAGGAGGCCTGCAAGCTCAT
GACAGACATTGCATCGGGTGACTCAGAACAAACTGAGCAATTTCTTCCTGAGGCTGATGCATTA
AAACAGAGCACCTCCATCTTCTCTGATCTGTGTGCACCATATTAAGTGTACAGTGGCCAAAGCC
ACGTTTAAGTAGTGTCAGGAATAGCAAATAAAGACAGCAGGCCTGCAGCAGGCTGCATGAGGAC
TTAGATGGTCATGAGAACATTGGGAATTTAGGCTGGCCGTGGGCGCACCTCTACTTTCCTAAGA
AAGTCAAAGTGTTTACTGCTTTATCACCACGGCCTGCTCTCACCTGTCATTTATGATTTTTCAG
ATATAAAACCTTGGTAAGATCTTTTCATACATTTTTATAAAGTAGAAGGGAATACAAGATTCCC
CAGTTGGTACACTTTTTCAGATCTGTCCGATAGAAGCACTAGTTTGTGACATATCCCTGCTGCG
AACTGCGGACTGAGACATGACACCTGAGGATCATGGCTTTCCCTCCATTATTGGAGCTCTTGAT
ATAAAGTTCATCTGCTACTGTGGAACCCAAGTTTCTGCAGTTGGTTTCGAGCTACAGGCAGTTT
GTAACGCTTGCATGAGTGAACAGTGTCTCAGTCTTTAATTTTCAGTGGTACTGTTTATTTTTCA
GAACTCCACAAAGAATGCTGGCTATGTCTATCTTTCCATCTGTATTTTGTTGCCTCGATGTACT
ATATTTGTTGCATGTATATTAAAGATTTTTTTAACCATA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001334240	(Get FASTA)	NCBI Sequence Viewer
	NP_001346890	(Get FASTA)	NCBI Sequence Viewer
	NP_941022	(Get FASTA)	NCBI Sequence Viewer
	XP_006503641	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH57375	(Get FASTA)	NCBI Sequence Viewer
	AAH58808	(Get FASTA)	NCBI Sequence Viewer
	EDL14676	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000040108
	ENSMUSP00000040108.9
	ENSMUSP00000111036
	ENSMUSP00000111036.2
GenBank Protein	Q6PDC0	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_941022 ⟸ NM_198620
- Peptide Label:	isoform 2
- UniProtKB:	Q6PFX5 (UniProtKB/Swiss-Prot), Q6PDC0 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MASRSLGGLSGSRGGGGGGGGKKSLSARNAAVERRNLITVCRFSVKTLIDRSCFETIDDSSPEF NNFAAVLEQILSHRLKGQVTWFGYESPRSFWDYIRVACRKVSQNCICSIENMENVSSSRAKGRA WIRVALMEKHLSEYISTALRDFKTTRRFYEDGAIVLGEEANMLAGMLLGLNAIDFSFCLKGEGL DGTFPAVIDYTPYLKFEQSSDSISSDEEELRTFGSSDSESSTPENVGPPLILDENTWFNKCKRV RQKYQLTLEQKGYLEELLRLRENQLSESVSQNKILLQRIEDSDLAHKLEKEQLEYIIVELQDQL KSYQSLDQLSAEVSLSQASLDPSHSQEGDGKQDSLNFIGEGKEDTPSLLGLCGSLTSVASYKSL TSLKSNDCLASPTTELTSPGLTPS hide sequence

RefSeq Acc Id:

XP_006503641 ⟸ XM_006503578

- Peptide Label:

isoform X1

- Sequence:

show sequence

MASRSLGGLSGSRGGGGGGGGKKSLSARNAAVERRNLITVCRFSVKTLIDRSCFETIDDSSPEF
NNFAAVLEQILSHRLKGQVTWFGYESPRSFWDYIRVACRKVSQNCICSIENMENVSSSRAKGRA
WIRVALMEKHLSEYISTALRDFKTTRRFYEDGAIVLGEEANMLAGMLLGLNAIDFSFCLKGEGL
DGTFPAVIDYTPYLKFEQSSDSISSDEEELRTFGSSDSESSTPENVGPPLILDENTWFNKCKRV
RQKYQLTLEQKGYLEELLRLRENQLSESVSQNKILLQRIEDSDLAHKLEKEQLEYIIVELQDQL
TVLKNNDLRSRQELTAHLTKQWPSPGALDVNAVALDTLLYRKHNKQCKSYQSLDQLSAEVSLSQ
ASLDPSHSQEGDGKQDSLNFIGEGKEDTPSLLGLCGSLTSVASYKSLTSLKSNDCLASPTTELT
SPGLTPS

hide sequence

RefSeq Acc Id:	NP_001346890 ⟸ NM_001359961
- Peptide Label:	isoform 3

RefSeq Acc Id:	NP_001334240 ⟸ NM_001347311
- Peptide Label:	isoform 1
- UniProtKB:	D3YUQ5 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSMUSP00000040108 ⟸ ENSMUST00000047485

RefSeq Acc Id:

ENSMUSP00000111036 ⟸ ENSMUST00000115378

Protein Domains

RUN

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6PDC0-F1-model_v2	AlphaFold	Q6PDC0	1-408	view protein structure

Promoters

RGD ID:

6838276

Promoter ID:

MM_KWN:41333

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Lung

Transcripts:

ENSMUST00000115378, OTTMUST00000055842

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	5	8,622,361 - 8,622,861 (-)	MPROMDB

RGD ID:

6885960

Promoter ID:

EPDNEW_M6431

Type:

initiation region

Name:

Rundc3b_1

Description:

Mus musculus RUN domain containing 3B , transcript variant 1,mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	5	8,623,017 - 8,623,077	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:2685286	AgrOrtholog
Ensembl Genes	ENSMUSG00000040570	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000047485	ENTREZGENE
	ENSMUST00000047485.15	UniProtKB/Swiss-Prot
	ENSMUST00000115378	ENTREZGENE
	ENSMUST00000115378.2	UniProtKB/TrEMBL
Gene3D-CATH	1.20.58.900	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Run_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Run_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RUN_RUNDC3B	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RUNDC3A_B	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:242819	UniProtKB/Swiss-Prot
MGD	MGI:2685286	ENTREZGENE
NCBI Gene	242819	ENTREZGENE
PANTHER	RUN DOMAIN-CONTAINING 3 PROTEIN RUNDC3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RUN DOMAIN-CONTAINING PROTEIN 3B	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	RUN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Rundc3b	PhenoGen
PROSITE	RUN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	RUN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF140741	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	D3YUQ5	ENTREZGENE, UniProtKB/TrEMBL
	Q6PDC0	ENTREZGENE
	Q6PFX5	ENTREZGENE
	RUN3B_MOUSE	UniProtKB/Swiss-Prot
UniProt Secondary	Q6PFX5	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Mammalian Phenotype