Try10 (trypsin 10) - Rat Genome Database

Name: Try10
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Try10 (trypsin 10) Mus musculus

Analyze

Symbol:

Try10

Name:

trypsin 10

RGD ID:

1615456

MGI Page

MGI

Description:

Predicted to enable calcium ion binding activity and serine-type endopeptidase activity. Predicted to be involved in collagen catabolic process and proteolysis. Located in collagen-containing extracellular matrix. Human ortholog(s) of this gene implicated in pancreatitis. Orthologous to several human genes including PRSS1 (serine protease 1).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

trypsinogen 10

RGD Orthologs

Human

Rat

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PRSS1 (serine protease 1)	HGNC	Ensembl, HomoloGene, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Prss1 (serine protease 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	PRSS3 (serine protease 3)	HGNC	Ensembl, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Homo sapiens (human):	PRSS2 (serine protease 2)	HGNC	Ensembl, OMA, OrthoDB, Panther
Alliance orthologs ³
Homo sapiens (human):	PRSS1 (serine protease 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Rattus norvegicus (Norway rat):	Prss3 (serine protease 3)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Homo sapiens (human):	PRSS2 (serine protease 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Rattus norvegicus (Norway rat):	Try5 (trypsin 5)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Homo sapiens (human):	PRSS3P2 (PRSS3 pseudogene 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	prss1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Try29F	Alliance	DIOPT (Hieranoid\|InParanoid\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG31954	Alliance	DIOPT (Hieranoid\|InParanoid\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	sdhaf4	Alliance	DIOPT (InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	prss1	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	akt1	Alliance	DIOPT (InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	try10	Alliance	DIOPT (InParanoid\|OMA\|PANTHER)

Related Pseudogenes:

Gm5409

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	41,331,039 - 41,334,878 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	41,331,039 - 41,334,848 (+)	Ensembl		GRCm39 Ensembl
GRCm38	6	41,354,105 - 41,357,944 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	41,354,105 - 41,357,914 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	41,304,104 - 41,307,943 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	41,283,799 - 41,287,489 (+)	NCBI		MGSCv36	mm8
Celera	6	41,308,711 - 41,312,550 (+)	NCBI		Celera
Cytogenetic Map	6	B1	NCBI
cM Map	6	19.48	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Chronic Pancreatitis (ISO)

cystic fibrosis (ISO)

Diabetic Nephropathies (ISO)

Familial Hypophosphatemic Rickets (ISO)

genetic disease (ISO)

Hereditary Neoplastic Syndromes (ISO)

Hereditary Pancreatitis (ISO)

Hypophosphatemic Rickets (ISO)

myoepithelioma (ISO)

pancreatitis (ISO)

Reperfusion Injury (ISO)

Trypsinogen Deficiency (ISO)

type 1 diabetes mellitus (ISO)

vitamin D-dependent rickets type 2A (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-alpha-phellandrene (ISO)

(S)-nicotine (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (EXP)

2,4,6-trinitrobenzenesulfonic acid (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-phellandrene (ISO)

ammonium chloride (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

Benzo[ghi]perylene (EXP)

bis(2-ethylhexyl) phthalate (EXP,ISO)

bisphenol A (ISO)

Bisphenol B (ISO)

chlorpyrifos (EXP)

copper atom (ISO)

copper(0) (ISO)

dexamethasone (EXP)

diarsenic trioxide (ISO)

genistein (ISO)

glyphosate (EXP)

ivermectin (ISO)

N-ethyl-N-nitrosourea (EXP)

N-nitrosodiethylamine (EXP,ISO)

nicotine (ISO)

oxidopamine (ISO)

potassium dichromate (ISO)

reserpine (ISO)

resveratrol (ISO)

SCH-351591 (ISO)

sodium arsenite (ISO)

sodium dichromate (ISO)

streptozocin (EXP)

testosterone (ISO)

tetrathiomolybdate(2-) (ISO)

trichloroethene (ISO)

wogonin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

collagen catabolic process (ISO)

proteolysis (IBA,ISO)

response to acetaldehyde (ISO)

response to caffeine (ISO)

response to nicotine (ISO)

response to nutrient (ISO)

Cellular Component

collagen-containing extracellular matrix (HDA)

extracellular region (ISO)

extracellular space (IBA,ISO)

Molecular Function

calcium ion binding (ISO)

serine-type endopeptidase activity (IBA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

influenza A pathway (IEA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

decreased heart rate (IEA)

decreased leukocyte cell number (IEA)

decreased thigmotaxis (IEA)

increased circulating creatinine level (IEA)

prolonged RR interval (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
2.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10349636	PMID:11042159	PMID:11076861	PMID:11160223	PMID:11217851	PMID:12466851	PMID:12477932	PMID:16141072	PMID:16141073	PMID:21565611	PMID:21873635	PMID:28071719
PMID:28378742	PMID:29459677	PMID:30550785	PMID:36114006

Genomics

Comparative Map Data

Try10
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	41,331,039 - 41,334,878 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	41,331,039 - 41,334,848 (+)	Ensembl		GRCm39 Ensembl
GRCm38	6	41,354,105 - 41,357,944 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	41,354,105 - 41,357,914 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	41,304,104 - 41,307,943 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	41,283,799 - 41,287,489 (+)	NCBI		MGSCv36	mm8
Celera	6	41,308,711 - 41,312,550 (+)	NCBI		Celera
Cytogenetic Map	6	B1	NCBI
cM Map	6	19.48	NCBI

PRSS1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	142,749,472 - 142,753,072 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	142,749,468 - 142,753,072 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	142,457,323 - 142,460,923 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	142,136,904 - 142,140,495 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	141,943,618 - 141,947,210	NCBI
Celera	7	137,264,071 - 137,267,679 (+)	NCBI		Celera
Cytogenetic Map	7	q34	ENTREZGENE
HuRef	7	136,785,804 - 136,789,412 (+)	NCBI		HuRef
CHM1_1	7	142,383,440 - 142,387,048 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	144,105,191 - 144,108,791 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	141,828,623 - 141,832,231 (+)	NCBI

Prss1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	71,331,249 - 71,334,452 (+)	NCBI		GRCr8
mRatBN7.2	4	70,364,589 - 70,367,792 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	70,364,586 - 70,367,792 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	75,273,683 - 75,276,886 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	71,187,904 - 71,191,107 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	69,603,651 - 69,606,854 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	70,776,046 - 70,779,249 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	70,776,046 - 70,779,249 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	135,566,023 - 135,569,226 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	69,185,877 - 69,189,080 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	69,462,006 - 69,465,210 (+)	NCBI
Celera	4	65,329,764 - 65,332,967 (+)	NCBI		Celera
Cytogenetic Map	4	q23	NCBI

Variants

Variants in Try10
154 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	43
Count of miRNA genes:	42
Interacting mature miRNAs:	43
Transcripts:	ENSMUST00000072103
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
25440480	Moaq2_m	modifier of alien QTL 2 (mouse)					6	3050001	117476961	Mouse
26884414	Bzwq12_m	bi-zygomatic width QTL 12, 16 week (mouse)					6	3400000	139076998	Mouse
1300556	Cia6_m	collagen induced arthritis QTL 6 (mouse)			Not determined		6	4464884	87403016	Mouse
11353840	Bmiq2_m	body mass index QTL 2 (mouse)					6	4503823	45291115	Mouse
1357520	Axtq2_m	anxiety QTL 2 (mouse)			Not determined		6	4503823	48703611	Mouse
1357481	Aaj2_m	anxiety in A/J 2 (mouse)			Not determined		6	4503823	48703611	Mouse
11353841	Bmiq3_m	body mass index QTL 3 (mouse)					6	4503823	48703611	Mouse
4142271	Egq8_m	early growth QTL 8 (mouse)			Not determined			4503823	96633110	Mouse
4142232	W6q4_m	weight 6 weeks QTL 4 (mouse)			Not determined			4503823	96633110	Mouse
4142126	W3q3_m	weight 3 weeks QTL 3 (mouse)			Not determined			4503823	96633110	Mouse
4142361	W10q11_m	weight 10 weeks QTL 11 (mouse)			Not determined			4503823	96633110	Mouse
26884441	Sklq3_m	skull length QTL 3, 5 week (mouse)					6	7600000	80576983	Mouse
1302051	Sluc7_m	susceptibility to lung cancer 7 (mouse)			Not determined		6	9297074	43297168	Mouse
10043869	Cia6a_m	collagen induced arthritis QTL 6a (mouse)			Not determined		6	12117971	46118069	Mouse
4141749	Obrq2_m	obesity resistance QTL 2 (mouse)			Not determined			12751221	46751333	Mouse
1301998	Bts2_m	bladder tumor susceptibility 2 (mouse)			Not determined		6	12751221	46751333	Mouse
27226726	Tibmd7_m	tibia midshaft diameter 7, 16 week (mouse)					6	17699999	53476985	Mouse
1301850	Fglu_m	fasting glucose (mouse)			Not determined		6	17711598	51711719	Mouse
1301724	Pcd4ts1_m	p-glycoprotein positive CD4 T cell subset 1 (mouse)			Not determined		6	17711598	51711719	Mouse
4140989	Spqq2_m	sperm quality QTL 2 (mouse)			Not determined			17711598	51711719	Mouse
1357442	Dbts1_m	diabetes 1 (mouse)			Not determined		6	18234147	73364675	Mouse
12904940	Edlmmq5_m	extensor digitorum longus muscle mass QTL 5 (mouse)					6	19616346	53616346	Mouse
12904943	Tammq4_m	tibialis anterior muscle mass QTL 4 (mouse)					6	19616346	53616346	Mouse
12904952	Gmmq4_m	gastrocnemius muscle mass QTL 4 (mouse)					6	19616346	53616346	Mouse
10412213	Sxbq2_m	SGC/Knj cross B6 QTL 2 (mouse)			Not determined		6	19912685	71299759	Mouse
10412107	Desp4_m	despair 4 (mouse)			Not determined		6	20049830	54049830	Mouse
14700690	Ccs6_m	colon cancer susceptibility 6 (mouse)					6	23776934	57776934	Mouse
13208564	Bmiq7_m	body mass index QTL 7 (mouse)					6	24999999	79976983	Mouse
4141988	Obrq3_m	obesity resistance QTL 3 (mouse)			Not determined			28290993	62291115	Mouse
4141454	Obrq4_m	obesity resistance QTL 4 (mouse)			Not determined			31703499	65703611	Mouse
12880425	V25Dq5_m	vitamin D inactive form serum level QTL 5 (mouse)					6	32676980	66676980	Mouse
4141782	Mrdq5_m	modifier of retinal degeneration QTL 5 (mouse)			Not determined			32827585	78215957	Mouse
1300959	Lxw2_m	lupus BXSB x NZW 2 (mouse)			Not determined		6	33872261	67872400	Mouse
11252142	Mom12_m	Modifier of Min 12 (mouse)					6	33872261	67872400	Mouse
1300767	Aliq4_m	acute lung injury QTL 4 (mouse)			Not determined		6	36273332	70273435	Mouse
1357539	Bsbob3_m	BSB obesity 3 (mouse)			Not determined		6	36448456	70448576	Mouse
4141094	Hrtr1_m	heart rate 1 (mouse)			Not determined			36741463	70741463	Mouse
14746995	Manh60_m	mandible shape 60 (mouse)					6	37202662	71202662	Mouse
1558984	Cplaq9_m	circadian period of locomotor activity 9 (mouse)			Not determined		6	38646560	92584431	Mouse
1301326	Trbv4c2_m	T cell receptor beta variable 4 (mouse)			Not determined		6	40868230	71356155	Mouse

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NG_006980	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001038996	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC158659	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AE000664	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK133516	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC138698	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC146017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466533	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000072103 ⟹ ENSMUSP00000071976

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	6	41,331,039 - 41,334,848 (+)	Ensembl
GRCm38.p6 Ensembl	6	41,354,105 - 41,357,914 (+)	Ensembl

RefSeq Acc Id:

NM_001038996 ⟹ NP_001034085

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	41,331,039 - 41,334,878 (+)	NCBI
GRCm38	6	41,354,105 - 41,357,944 (+)	ENTREZGENE
MGSCv37	6	41,304,104 - 41,307,943 (+)	RGD
Celera	6	41,308,711 - 41,312,550 (+)	RGD
cM Map	6		ENTREZGENE

Sequence:

show sequence

GACGGAGCCCTCCCCTTAGTATCTCCTTCTCCCTGCACTGGGGTATAAAGGCAAGCTTTCCCAC
AGTGTTCACTGCCTGCTGTCACAATGAGTACACTCCTGTTCCTGGCCCTTGTGGGAGCAGCTGT
TGCTTTCCCTGTGGATGATGATGACAAGATAGTTGGAGGATACACCTGCCGAGAGAATTCTGTT
CCCTACCAGGTGTCCCTGAACTCTGGCTACCACTTCTGTGGAGGTTCCCTCATCAATGACCAGT
GGGTGGTGTCTGCAGCTCACTGCTACAAGTCCCGCATCCAAGTGAGACTGGGAGAGCACAACAT
CAACGTCCTGGAGGGCAATGAGCAGTTTATCGATGCTGCCAACATCATCAAGCATCCTAAATTC
AAAAAGAAGACTCTGGACAATGACATCATGCTGATCAAGCTGTCTTCTCCTGTGACCCTCAATG
CCAGAGTGGCCACTGTGGCTCTGCCCAGCTCCTGTGCAGCTGCTGGCACTCAGTGCCTCATCTC
TGGCTGGGGCAACACCTTGAGCTCTGGCGTGAACAACCCAGACCTGCTCCAGTGCCTGGATGCT
CCACTGCTGCCTCAGGCTGACTGTGAGGCCTCCTATCCTGGAAAGATCACCAAGAACATGATCT
GTGTTGGCTTCCTGGAGGGAGGCAAAGATTCCTGCCAGGGTGACTCTGGTGGCCCTGTGGTCTG
CAATGGACAGCTCCAGGGCATTGTTTCTTGGGGCTATGGCTGTGCCCAGAAGGACAACCCTGGT
GTGTACACCAAGGTCTGCAACTATGTGGACTGGATTCAAAACACCATTGCTGCAAACTAAGCAT
CCTAATCCCTATGAAGTCACTATGCCAATAAACTGAATTTTTTCTTACTTTCTGAGTC

hide sequence

Protein Sequences


Protein RefSeqs	NP_001034085	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAB69058	(Get FASTA)	NCBI Sequence Viewer
	AAI38699	(Get FASTA)	NCBI Sequence Viewer
	AAI46018	(Get FASTA)	NCBI Sequence Viewer
	BAE21698	(Get FASTA)	NCBI Sequence Viewer
	EDL13535	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000071976
	ENSMUSP00000071976.6

RefSeq Acc Id:	NP_001034085 ⟸ NM_001038996
- Peptide Label:	precursor
- UniProtKB:	Q792Z1 (UniProtKB/TrEMBL), B9EJ35 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSTLLFLALVGAAVAFPVDDDDKIVGGYTCRENSVPYQVSLNSGYHFCGGSLINDQWVVSAAHC YKSRIQVRLGEHNINVLEGNEQFIDAANIIKHPKFKKKTLDNDIMLIKLSSPVTLNARVATVAL PSSCAAAGTQCLISGWGNTLSSGVNNPDLLQCLDAPLLPQADCEASYPGKITKNMICVGFLEGG KDSCQGDSGGPVVCNGQLQGIVSWGYGCAQKDNPGVYTKVCNYVDWIQNTIAAN hide sequence

RefSeq Acc Id:

ENSMUSP00000071976 ⟸ ENSMUST00000072103

Protein Domains

Peptidase S1

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q792Z1-F1-model_v2	AlphaFold	Q792Z1	1-246	view protein structure

Promoters

RGD ID:

6889470

Promoter ID:

EPDNEW_M8186

Type:

multiple initiation site

Name:

Try10_1

Description:

Mus musculus trypsin 10 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	6	41,354,179 - 41,354,239	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:3687012	AgrOrtholog
Ensembl Genes	ENSMUSG00000071521	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000072103	ENTREZGENE
	ENSMUST00000072103.7	UniProtKB/TrEMBL
Gene3D-CATH	2.40.10.10	UniProtKB/TrEMBL
InterPro	Pept_cys/ser_Trypsin-like	UniProtKB/TrEMBL
	Peptidase_S1/S6_AS	UniProtKB/TrEMBL
	Peptidase_S1_PA_chymotrypsin	UniProtKB/TrEMBL
	Peptidase_S1_S6	UniProtKB/TrEMBL
	Peptidase_S1A	UniProtKB/TrEMBL
	TRYPSIN_SER	UniProtKB/TrEMBL
KEGG Report	mmu:436522	UniProtKB/TrEMBL
MGD	MGI:3687012	ENTREZGENE
NCBI Gene	436522	ENTREZGENE
PANTHER	TRYPSIN-1	UniProtKB/TrEMBL
	TRYPSIN-RELATED	UniProtKB/TrEMBL
Pfam	Trypsin	UniProtKB/TrEMBL
PhenoGen	Try10	PhenoGen
PRINTS	CHYMOTRYPSIN	UniProtKB/TrEMBL
PROSITE	TRYPSIN_DOM	UniProtKB/TrEMBL
	TRYPSIN_HIS	UniProtKB/TrEMBL
	TRYPSIN_SER	UniProtKB/TrEMBL
SMART	Tryp_SPc	UniProtKB/TrEMBL
Superfamily-SCOP	Pept_Ser_Cys	UniProtKB/TrEMBL
UniProt	B9EJ35	ENTREZGENE
	Q792Z1	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)

Mammalian Phenotype

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)

Mammalian Phenotype