Catspere1 (cation channel sperm associated auxiliary subunit epsilon 1) - Rat Genome Database

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Gene: Catspere1 (cation channel sperm associated auxiliary subunit epsilon 1) Mus musculus
Analyze
No known orthologs.
Symbol: Catspere1
Name: cation channel sperm associated auxiliary subunit epsilon 1
RGD ID: 1615368
MGI Page MGI
Description: Predicted to be involved in flagellated sperm motility and sperm capacitation. Located in sperm principal piece. Part of CatSper complex. Orthologous to human CATSPERE (catsper channel auxiliary subunit epsilon).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: cation channel sperm associated auxiliary subunit epsilon; cation channel sperm-associated auxiliary subunit epsilon; cation channel sperm-associated protein subunit epsilon; Cats; catSper-epsilon; Catspere; catSperepsilon; EG631584; Gm7068; predicted gene 7068; uncharacterized protein C1orf101 homolog
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391177,635,985 - 177,789,819 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1177,635,997 - 177,790,244 (+)EnsemblGRCm39 Ensembl
GRCm381177,808,419 - 177,962,253 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1177,808,431 - 177,962,678 (+)EnsemblGRCm38mm10GRCm38
MGSCv371179,738,606 - 179,892,364 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361179,694,923 - 179,798,908 (+)NCBIMGSCv36mm8
Celera1184,860,388 - 185,047,523 (+)NCBICelera
Cytogenetic Map1H4NCBI
cM Map182.82NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
CatSper complex  (IBA,IDA)
sperm principal piece  (IBA,IDA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
Additional References at PubMed
PMID:14610273   PMID:21873635   PMID:28226241   PMID:34225353  


Genomics

Variants

.
Variants in Catspere1
4423 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300777Chol10_mcholesterol 10 (mouse)Not determined9147875502181875616Mouse
10054490Opefa_mopen field activity (mouse)Not determined1153712853187712853Mouse
12880426V25Dq2_mvitamin D inactive form serum level QTL 2 (mouse)1172532197195154279Mouse
4142159Nba2_mNew Zealand Black autoimmunity 2 (mouse)Not determined151835111185835280Mouse
4141245Cq2_mcholesterol QTL 2 (mouse)Not determined1157456299191456436Mouse
1301339Hdlq15_mHDL QTL 15 (mouse)Not determined1165873675195154279Mouse
10766456Sle21_msystematic lupus erythematosus susceptibility 21 (mouse)1155831765189831892Mouse
1301189Lmr8_mleishmaniasis resistance 8 (mouse)Not determined1156602037189303617Mouse
1300934Cfbw1_mcystic fibrosis body weight 1 (mouse)Not determined1145145207179145325Mouse
11059557Lmr20a_mleishmaniasis resistance 20a (mouse)1158468817192468938Mouse
13207571Tcq11_mtotal cholesterol QTL 11 (mouse)1169137569179647565Mouse
1558802Skmw6_mskeletal muscle weight 6 (mouse)Not determined1167954584195154279Mouse
10054270Nba10_mNew Zealand Black autoimmunity 10 (mouse)Not determined1152794822186438620Mouse
27095935Ulnl5_mulna length 5, 10 week (mouse)1128727737181327565Mouse
1300745Gvhd1_mgraft-versus-host disease 1 (mouse)Not determined1157456299191456436Mouse
1301132Mors1_mmodifier of obesity related sterility 1 (mouse)Not determined1170379500195154279Mouse
1300960Hpic2_mhaloperidol induced catalepsy 2 (mouse)Not determined1175468817181400659Mouse
1302158Fembrs5_mfemur breaking strength 5 (mouse)Not determined1167462514195154279Mouse
1301251Scc3_mcolon tumor susceptibility 3 (mouse)Not determined1168213823195154279Mouse
1300727Mptp1_mMPTP sensitivity 1 (mouse)Not determined1171632048192681050Mouse
1301602Bslm4_mbasal locomotor activity 4 (mouse)Not determined1157456299191456436Mouse
1301202Yaa4_mY-linked autoimmune acceleration 4 (mouse)Not determined1158468817192468938Mouse
11059558Lmr20c_mleishmaniasis resistance 20c (mouse)1158468817192468938Mouse
1300823Ath9_matherosclerosis 9 (mouse)Not determined1160112768194112883Mouse
10043963Obq25_mobesity QTL 25 (mouse)Not determined1154410512188410512Mouse
1302132Pbw1_mpentobarbital withdrawal QTL 1 (mouse)Not determined1155831765189831892Mouse
1301596Elnt_mescape latencies during navigation task (mouse)Not determined1162145207194111528Mouse
1302023Orch4_mautoimmune orchitis resistance 4 (mouse)Not determined1175211318195154279Mouse
1357889Lprq3_mlipoprotein QTL 3 (mouse)Not determined1152038741186038913Mouse
13464138Hdlq107_mHDL QTL 107 (mouse)1152132744186132744Mouse
1300571Opfa_mopen field activity (mouse)Not determined1144531347178531592Mouse
4141149Hbnr4_mHeligmosomoides bakeri nematode resistance 4 (mouse)Not determined147125258188983224Mouse
10043899Hdlq99_mHDL QTL 99 (mouse)Not determined1147875502181875616Mouse
12904957Gmmq1_mgastrocnemius muscle mass QTL 1 (mouse)1155002940189002940Mouse
1301619Cafq1_mcaffeine metabolism QTL 1 (mouse)Not determined1155716221189716369Mouse
4142182Shali5_msurvival time to hyperoxic acute lung injury 5 (mouse)Not determined155582237185994196Mouse
11049575Lmr8b_mleishmaniasis resistance 8b (mouse)1172303451195154279Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)175976637181327565Mouse
12880429V25Dq1_mvitamin D inactive form serum level QTL 1 (mouse)1172632197195154279Mouse
11537365Cnes4_mC. neoformans susceptibility locus 4 (mouse)1144449142178449142Mouse
1301301Sle1_msystemic lupus erythmatosus susceptibility 1 (mouse)Not determined1152038741186038913Mouse
11251722Ewc1_methanol withdrawal and consumption 1 (mouse)1152132744186132744Mouse
1301122Cd8mts1_mCD8 T memory cell subset 1 (mouse)Not determined1155831765189831892Mouse
1301652Cpfd2_mcerebellum pattern fissures (mouse)Not determined1172303451195154279Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
1357493Lgaq3_mlate growth adjusted QTL 3 (mouse)Not determined1150193673188359312Mouse
1559024Zit1_mzinc induced tolerance 1 (mouse)Not determined1167462514195154279Mouse
4141554Cfmq1_mcystic fibrosis modifier QTL 1 (mouse)Not determined1152038741186038913Mouse
10412074Nhdlt1_mnon-HDL cholesterol and triglyceride levels 1 (mouse)Not determined1153675990187676105Mouse
1301932Ssta2_msusceptibility to Salmonella typhimurium antigens 2 (mouse)Not determined1155716221189716369Mouse
1301134Bmd1_mbone mineral density 1 (mouse)Not determined1156602037189303617Mouse
4142389Scfr1_mstem cell frequency regulator 1 (mouse)Not determined171632048189303617Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
12791001Aath6_maortic arch atherosclerosis 6 (mouse)1147219390181219390Mouse
1357618Splq5_mspleen weight QTL 5 (mouse)Not determined1150193673188359312Mouse
4141346Skmw12_mskeletal muscle weight 12 (mouse)Not determined150756737184756922Mouse
1300948Fglu2_mfasting glucose 2 (mouse)Not determined1157456299191456436Mouse
1357485Lgq4_mlate growth QTL 4 (mouse)Not determined1150193673188359312Mouse
1301025Lbw7_mlupus NZB x NZW 7 (mouse)Not determined1152038741186038913Mouse
1301431Pcho1_mplasma cholesterol 1 (mouse)Not determined1159262573193262693Mouse
4141483Femwf7_mfemur work to failure 7 (mouse)Not determined167462514195154279Mouse
1301333Mop3_mmorphine preference 3 (mouse)Not determined1167756737189303617Mouse
10043863Swrl5_mSWR lupus locus 5 (mouse)Not determined1172303451195154279Mouse
10412162Nobq3_mNew Zealand obese QTL 3 (mouse)Not determined1103933405191225397Mouse
12904944Tammq1_mtibialis anterior muscle mass QTL 1 (mouse)1155002940189002940Mouse
12790988Phdlc5_mplasma HDL cholesterol 5 (mouse)9160097157194097157Mouse
12792983Liq1_mlimb inflammation QTL 1 (mouse)1167586086191225397Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
1301385Radpf2_mradiation pulmonary fibrosis 2 (mouse)Not determined1147125258182873798Mouse
12790984Pcho7_mplasma cholesterol 7 (mouse)1147219390181219390Mouse
10045887Cplaq13_mcircadian period of locomotor activity 13 (mouse)Not determined1172831765181400659Mouse
12904936Edlmmq1_mextensor digitorum longus muscle mass QTL 1 (mouse)1155002940189002940Mouse
12790996Aath2_maortic arch atherosclerosis 2 (mouse)1145077630179077630Mouse
10402498Lmr20_mleishmaniasis resistance 20 (mouse)Not determined1158468817192468938Mouse
1301614Cgnz1_mchronic glomerulonephritis in NZM 1 (mouse)Not determined1152038741186038913Mouse
1300842Sle9_msystematic lupus erythematosus susceptibility 9 (mouse)Not determined1158468817192468938Mouse
4141165Bglu3_mblood glucose level 3 (mouse)Not determined155831765189831892Mouse
1300888Berr1_mberghei resistance locus 1 (mouse)Not determined1164143227190534272Mouse
4141244Bmd5c_mbone mineral density 5c (mouse)Not determined155526796189526897Mouse
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
11081167Tir8_mtrypanosome infection response 8 (mouse)1155716221189716369Mouse
1301866Cplaq3_mcircadian period of locomotor activity 3 (mouse)Not determined1155721528189722608Mouse
1301309Emo1_memotionality 1 (mouse)Not determined1162977097185994196Mouse
1301632Bw8q1_mbody weight at 8 weeks QTL 1 (mouse)Not determined1161201261195154279Mouse
1300969Sluc5_msusceptibility to lung cancer 5 (mouse)Not determined1151186243185186402Mouse
10054271Nba9_mNew Zealand Black autoimmunity 9 (mouse)Not determined1155525623189527533Mouse
1301216Cbm1_mcerebellum weight 1 (mouse)Not determined1157456299191456436Mouse
11059556Lmr20b_mleishmaniasis resistance 20b (mouse)1158468817192468938Mouse
12790987Tgl5_mtriglyceride 5 (mouse)1160097157194097157Mouse
11532690Sluc37_msusceptibility to lung cancer 37 (mouse)1175468817194111528Mouse
27095915Scvln13_msacral vertebrae length 2, 16 week (mouse)1117527730179827565Mouse
1300732Melm2_mmelanoma modifier 2 (mouse)Not determined1157456299191456436Mouse
1301565Mnotch_mmodifier of Notch (mouse)Not determined1157456299191456436Mouse
1357732Tbbmd1_mtotal body bone mineral density 1 (mouse)Not determined1171983110195154279Mouse

Markers in Region
BB116930  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381177,990,203 - 177,990,330UniSTSGRCm38
GRCm381177,807,194 - 177,807,321UniSTSGRCm38
MGSCv371179,737,325 - 179,737,452UniSTSGRCm37
MGSCv371179,920,334 - 179,920,461UniSTSGRCm37
Celera1185,053,683 - 185,053,810UniSTS
Celera1184,859,107 - 184,859,234UniSTS
Cytogenetic Map1H4UniSTS
Whitehead/MRC_RH12226.73UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000194528   ⟹   ENSMUSP00000159061
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1177,635,997 - 177,790,244 (+)Ensembl
GRCm38.p6 Ensembl1177,808,431 - 177,962,678 (+)Ensembl
RefSeq Acc Id: NM_001368823   ⟹   NP_001355752
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,635,985 - 177,789,819 (+)NCBI
GRCm381177,808,419 - 177,962,253 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006497084   ⟹   XP_006497147
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,635,985 - 177,783,949 (+)NCBI
GRCm381177,808,419 - 177,953,719 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006497085   ⟹   XP_006497148
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,678,022 - 177,789,819 (+)NCBI
GRCm381177,850,456 - 177,962,253 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006497087   ⟹   XP_006497150
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,635,985 - 177,714,198 (+)NCBI
GRCm381177,808,419 - 177,886,632 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017314031   ⟹   XP_017169520
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,635,985 - 177,789,819 (+)NCBI
GRCm381177,808,419 - 177,962,253 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017314033   ⟹   XP_017169522
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,677,810 - 177,789,819 (+)NCBI
GRCm381177,850,244 - 177,962,253 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030241928   ⟹   XP_030097788
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,635,985 - 177,687,505 (+)NCBI
GRCm381177,808,419 - 177,859,939 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030241929   ⟹   XP_030097789
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,635,985 - 177,678,166 (+)NCBI
GRCm381177,808,419 - 177,850,600 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001779559
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,635,985 - 177,779,389 (+)NCBI
GRCm381177,808,419 - 177,951,823 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001779564
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,635,985 - 177,735,317 (+)NCBI
GRCm381177,808,419 - 177,907,751 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_006497147   ⟸   XM_006497084
- Peptide Label: isoform X1
- UniProtKB: P0DP43 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006497150   ⟸   XM_006497087
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006497148   ⟸   XM_006497085
- Peptide Label: isoform X3
- UniProtKB: P0DP43 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017169520   ⟸   XM_017314031
- Peptide Label: isoform X2
- UniProtKB: P0DP43 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017169522   ⟸   XM_017314033
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: NP_001355752   ⟸   NM_001368823
- Peptide Label: precursor
- UniProtKB: P0DP43 (UniProtKB/Swiss-Prot),   A0A5F8MPP5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030097788   ⟸   XM_030241928
- Peptide Label: isoform X6
RefSeq Acc Id: XP_030097789   ⟸   XM_030241929
- Peptide Label: isoform X7
- UniProtKB: A0A5F8MPD0 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000159061   ⟸   ENSMUST00000194528

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P0DP43-F1-model_v2 AlphaFold P0DP43 1-985 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3647531 AgrOrtholog
Ensembl Genes ENSMUSG00000102483 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000194528 ENTREZGENE
  ENSMUST00000194528.3 UniProtKB/TrEMBL
InterPro CATSPERD/E UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:3647531 ENTREZGENE
NCBI Gene 631584 ENTREZGENE
PANTHER CATION CHANNEL SPERM-ASSOCIATED PROTEIN SUBUNIT EPSILON UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR33722 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CATSPERD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Catspere1 PhenoGen
PROSITE PROKAR_LIPOPROTEIN UniProtKB/TrEMBL
UniProt A0A5F8MPD0 ENTREZGENE
  A0A5F8MPP5 ENTREZGENE, UniProtKB/TrEMBL
  CTSRE_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-05-02 Catspere1  cation channel sperm associated auxiliary subunit epsilon 1  Catspere  cation channel sperm associated auxiliary subunit epsilon  Symbol and/or name change 5135510 APPROVED
2017-03-21 Catspere  cation channel sperm associated auxiliary subunit epsilon  Gm7068  predicted gene 7068  Symbol and/or name change 5135510 APPROVED