S100a14 (S100 calcium binding protein A14) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: S100a14 (S100 calcium binding protein A14) Mus musculus
Analyze
Symbol: S100a14
Name: S100 calcium binding protein A14
RGD ID: 1615126
MGI Page MGI
Description: Predicted to enable calcium ion binding activity; calcium-dependent protein binding activity; and chemokine receptor binding activity. Predicted to be involved in positive regulation of leukocyte chemotaxis; response to lipopolysaccharide; and toll-like receptor 4 signaling pathway. Predicted to act upstream of or within apoptotic process. Predicted to be located in cytoplasm. Predicted to be active in extracellular space and perinuclear region of cytoplasm. Is expressed in alimentary system; lower urinary tract; nasal cavity respiratory epithelium; and skin. Orthologous to human S100A14 (S100 calcium binding protein A14).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1110013O05Rik; protein S100-A14; S100 calcium binding protein A15; S100 calcium-binding protein A14; S100a; S100a15; S114
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39390,434,156 - 90,436,144 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl390,434,163 - 90,436,144 (+)EnsemblGRCm39 Ensembl
GRCm38390,526,849 - 90,528,837 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl390,526,856 - 90,528,837 (+)EnsemblGRCm38mm10GRCm38
MGSCv37390,330,771 - 90,332,759 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36390,612,797 - 90,614,760 (+)NCBIMGSCv36mm8
Celera390,565,393 - 90,567,381 (+)NCBICelera
Cytogenetic Map3F1NCBI
cM Map339.25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(S)-nicotine  (ISO)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
17beta-estradiol 3-benzoate  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2-acetamidofluorene  (EXP)
4,4'-sulfonyldiphenol  (EXP)
5-azacytidine  (ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (EXP)
all-trans-retinoic acid  (ISO)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bucladesine  (ISO)
butanal  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
carbon nanotube  (EXP)
chlordecone  (EXP)
chlorpyrifos  (EXP)
choline  (EXP)
chromium(6+)  (EXP)
chrysene  (EXP)
cobalt atom  (EXP)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
D-glucose  (EXP)
diarsenic trioxide  (ISO)
dibenz[a,h]anthracene  (EXP)
dicrotophos  (ISO)
dioxygen  (EXP)
dorsomorphin  (ISO)
ethanol  (ISO)
folic acid  (EXP)
fructose  (EXP)
glucose  (EXP)
herbicide  (EXP)
hydrogen peroxide  (ISO)
isobutanol  (ISO)
L-methionine  (EXP)
medroxyprogesterone acetate  (ISO)
mercury dibromide  (ISO)
N-Nitrosopyrrolidine  (ISO)
naphthalene  (EXP)
nickel atom  (ISO)
nicotine  (ISO)
O-methyleugenol  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
p-chloromercuribenzoic acid  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
phosgene  (EXP)
progesterone  (EXP)
resveratrol  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
tamoxifen  (EXP)
testosterone  (ISO)
tetraphene  (EXP)
thapsigargin  (ISO)
titanium dioxide  (EXP,ISO)
tris(2-butoxyethyl) phosphate  (ISO)
tunicamycin  (ISO)
valproic acid  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11944983   PMID:12466851   PMID:12477932   PMID:15203200   PMID:15336958   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:16602821   PMID:16938360   PMID:21267068   PMID:21873635   PMID:27626380   PMID:31263990   PMID:32098917   PMID:32483412   PMID:33579599   PMID:35917972  


Genomics

Comparative Map Data
S100a14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39390,434,156 - 90,436,144 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl390,434,163 - 90,436,144 (+)EnsemblGRCm39 Ensembl
GRCm38390,526,849 - 90,528,837 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl390,526,856 - 90,528,837 (+)EnsemblGRCm38mm10GRCm38
MGSCv37390,330,771 - 90,332,759 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36390,612,797 - 90,614,760 (+)NCBIMGSCv36mm8
Celera390,565,393 - 90,567,381 (+)NCBICelera
Cytogenetic Map3F1NCBI
cM Map339.25NCBI
S100A14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381153,614,255 - 153,616,325 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1153,614,255 - 153,616,986 (-)EnsemblGRCh38hg38GRCh38
GRCh371153,586,731 - 153,588,801 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361151,853,355 - 151,855,414 (-)NCBINCBI36Build 36hg18NCBI36
Build 341150,399,806 - 150,401,863NCBI
Cytogenetic Map1q21.3NCBI
HuRef1124,950,177 - 124,952,316 (-)NCBIHuRef
CHM1_11154,982,704 - 154,984,781 (-)NCBICHM1_1
T2T-CHM13v2.01152,751,515 - 152,754,472 (-)NCBIT2T-CHM13v2.0
S100a14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82178,305,976 - 178,308,004 (+)NCBIGRCr8
mRatBN7.22176,008,395 - 176,010,423 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2176,008,395 - 176,010,423 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2183,148,439 - 183,150,466 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02181,170,702 - 181,172,729 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02175,771,055 - 175,773,081 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02189,913,433 - 189,919,947 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02209,343,348 - 209,347,503 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42182,800,173 - 182,809,448 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2169,941,896 - 169,945,463 (+)NCBICelera
Cytogenetic Map2q34NCBI
S100a14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955545261,323 - 264,374 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955545261,483 - 263,689 (-)NCBIChiLan1.0ChiLan1.0
S100A14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2196,215,314 - 96,219,745 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1195,951,822 - 95,954,936 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01128,969,353 - 128,972,484 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11132,597,623 - 132,600,360 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1132,597,623 - 132,600,360 (-)Ensemblpanpan1.1panPan2
S100A14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1743,443,073 - 43,446,416 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl743,444,396 - 43,446,287 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha742,937,287 - 42,939,400 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0743,394,001 - 43,396,114 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl743,394,002 - 43,396,126 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1743,096,303 - 43,098,416 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0743,149,971 - 43,152,083 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0743,433,817 - 43,435,929 (+)NCBIUU_Cfam_GSD_1.0
S100a14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505824,383,931 - 24,386,005 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365803,414,296 - 3,416,393 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365803,414,315 - 3,416,335 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
S100A14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl496,027,639 - 96,029,869 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1496,027,746 - 96,029,878 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24104,969,371 - 104,971,503 (-)NCBISscrofa10.2Sscrofa10.2susScr3
S100A14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12010,188,016 - 10,190,973 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2010,188,866 - 10,190,979 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660389,564,102 - 9,568,184 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
S100a14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248853,529,026 - 3,532,182 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248853,529,813 - 3,531,314 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in S100a14
66 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:556
Count of miRNA genes:235
Interacting mature miRNAs:251
Transcripts:ENSMUST00000164481, ENSMUST00000167598
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33265060142405761Mouse
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7586174102690034Mouse
26884427Cvht4_mcranial vault height 4, 10 week (mouse)316054164109707316Mouse
13207570Tcq12_mtotal cholesterol QTL 12 (mouse)316504164130163649Mouse
26884422Cvht7_mcranial vault height 7, 16 week (mouse)328954149118893649Mouse
1302056Orgwq4_morgan weight QTL 4 (mouse)Not determined330067588147304689Mouse
1301705Sles3_msystemic lupus erythmatosus suppressor 3 (mouse)Not determined337174862143353183Mouse
13208566Bmiq5_mbody mass index QTL 5 (mouse)340954435115793649Mouse
26884380Skwq1_mskull length QTL 1, 5 week (mouse)343954435101607316Mouse
26884378Skwq6_mskull length QTL 6, 10 week (mouse)351907421102307316Mouse
26884382Bzwq1_mbi-zygomatic width QTL 1, 5 week (mouse)352207421137205761Mouse
11039519Ltpr3_mLeishmania tropica response 3 (mouse)356704102100464137Mouse
12880419V125Dq4_mvitamin D active form serum level QTL 4 (mouse)35890730792907307Mouse
4141294Bmd24_mbone mineral density 24 (mouse)Not determined36174006195740241Mouse
1301971Cia5_mcollagen induced arthritis QTL 5 (mouse)Not determined366046658100046795Mouse
25314313Syncl1_msynaptonemal complex length 1 (mouse)367907333128393649Mouse
11251721Ewc3_methanol withdrawal and consumption 3 (mouse)369568554103568554Mouse
1301791Char4_mP. chabaudi malaria resistance QTL 4 (mouse)Not determined369625509100655290Mouse
1301422Sle11_msystematic lupus erythematosus susceptibility 11 (mouse)Not determined370208904104209042Mouse
11049572Lmr11c_mleishmaniasis resistance 11c (mouse)372139967106140094Mouse
1300982Lmr11_mleishmaniasis resistance 11 (mouse)Not determined372139967106140094Mouse
1300595Tmevd2_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 2 (mouse)Not determined375463302109463549Mouse
1301392Eae3_msusceptibility to experimental allergic encephalomyelitis 3 (mouse)Not determined379548730113548837Mouse
1301947Pcfm3_mperiosteal circumference and femur length 3 (mouse)Not determined381084652115084797Mouse
1301904Iba2_minduction of brown adipocytes 2 (mouse)Not determined382147043116147184Mouse
11041900Lmr11a_mleishmaniasis resistance 11a (mouse)383463991117464137Mouse
11039510Ltpr3d_mLeishmania tropica response 3d (mouse)383463991117464137Mouse
11039511Ltpr3c_mLeishmania tropica response 3c (mouse)383463991117464137Mouse
11039507Ltpr3g_mLeishmania tropica response 3g (mouse)383463991117464137Mouse
11039508Ltpr3f_mLeishmania tropica response 3f (mouse)383463991117464137Mouse
11039509Ltpr3e_mLeishmania tropica response 3e (mouse)383463991117464137Mouse
11039512Ltpr3b_mLeishmania tropica response 3b (mouse)383463991117464137Mouse
1301272Cfsw1_mcystic fibrosis survival to weaning 1 (mouse)Not determined383882912117883044Mouse
4142099Cq3_mcholesterol QTL 3 (mouse)Not determined384888918118889067Mouse
14746984Manh54_mmandible shape 54 (mouse)385289152119289152Mouse
1357583Sle18_msystematic lupus erythematosus susceptibility 18 (mouse)Not determined387208904125316236Mouse
12738440Twq3_mtestis weight QTL 3 (mouse)387228015121228015Mouse
4142178Ctrq2_mC. trachomatis resistance QTL 2 (mouse)Not determined389139967137453008Mouse
10766455Sle22_msystematic lupus erythematosus susceptibility 22 (mouse)390376936124377072Mouse
14747001Mancz4_mmandible centroid size 4 (mouse)390378017124378017Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000164481   ⟹   ENSMUSP00000129862
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl390,434,174 - 90,436,144 (+)Ensembl
GRCm38.p6 Ensembl390,526,867 - 90,528,837 (+)Ensembl
RefSeq Acc Id: ENSMUST00000167598   ⟹   ENSMUSP00000126821
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl390,434,177 - 90,436,144 (+)Ensembl
GRCm38.p6 Ensembl390,526,870 - 90,528,837 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199538   ⟹   ENSMUSP00000142428
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl390,434,163 - 90,435,537 (+)Ensembl
GRCm38.p6 Ensembl390,526,856 - 90,528,230 (+)Ensembl
RefSeq Acc Id: ENSMUST00000200565
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl390,434,179 - 90,436,133 (+)Ensembl
GRCm38.p6 Ensembl390,526,872 - 90,528,826 (+)Ensembl
RefSeq Acc Id: NM_001163525   ⟹   NP_001156997
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39390,434,156 - 90,436,144 (+)NCBI
GRCm38390,526,849 - 90,528,837 (+)ENTREZGENE
MGSCv37390,330,771 - 90,332,759 (+)RGD
Celera390,565,393 - 90,567,381 (+)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001163526   ⟹   NP_001156998
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39390,434,156 - 90,436,144 (+)NCBI
GRCm38390,526,849 - 90,528,837 (+)ENTREZGENE
MGSCv37390,330,771 - 90,332,759 (+)RGD
Celera390,565,393 - 90,567,381 (+)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_025393   ⟹   NP_079669
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39390,434,156 - 90,436,144 (+)NCBI
GRCm38390,526,849 - 90,528,837 (+)ENTREZGENE
MGSCv37390,330,771 - 90,332,759 (+)RGD
Celera390,565,393 - 90,567,381 (+)RGD
cM Map3 ENTREZGENE
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_079669   ⟸   NM_025393
- Peptide Label: isoform a
- UniProtKB: Q9D1D8 (UniProtKB/Swiss-Prot),   Q9D2Q8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001156997   ⟸   NM_001163525
- Peptide Label: isoform a
- UniProtKB: Q9D1D8 (UniProtKB/Swiss-Prot),   Q9D2Q8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001156998   ⟸   NM_001163526
- Peptide Label: isoform b
- UniProtKB: E9Q2K8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000129862   ⟸   ENSMUST00000164481
RefSeq Acc Id: ENSMUSP00000142428   ⟸   ENSMUST00000199538
RefSeq Acc Id: ENSMUSP00000126821   ⟸   ENSMUST00000167598
Protein Domains
EF-hand

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9D2Q8-F1-model_v2 AlphaFold Q9D2Q8 1-104 view protein structure

Promoters
RGD ID:6881354
Promoter ID:EPDNEW_M4128
Type:initiation region
Name:S100a14_1
Description:Mus musculus S100 calcium binding protein A14 , transcript variant3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M4129  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38390,526,872 - 90,526,932EPDNEW
RGD ID:6881356
Promoter ID:EPDNEW_M4129
Type:multiple initiation site
Name:S100a14_2
Description:Mus musculus S100 calcium binding protein A14 , transcript variant3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M4128  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38390,527,147 - 90,527,207EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1913416 AgrOrtholog
Ensembl Genes ENSMUSG00000042306 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000164481 ENTREZGENE
  ENSMUST00000164481.7 UniProtKB/TrEMBL
  ENSMUST00000167598 ENTREZGENE
  ENSMUST00000167598.6 UniProtKB/Swiss-Prot
  ENSMUST00000199538 ENTREZGENE
  ENSMUST00000199538.5 UniProtKB/Swiss-Prot
Gene3D-CATH EF-hand UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro EF-hand-dom_pair UniProtKB/Swiss-Prot
  S100_Ca-bd_sub UniProtKB/Swiss-Prot
KEGG Report mmu:66166 UniProtKB/Swiss-Prot
MGD MGI:1913416 ENTREZGENE
NCBI Gene 66166 ENTREZGENE
PANTHER PTHR11639:SF4 UniProtKB/Swiss-Prot
  S100 CALCIUM-BINDING PROTEIN UniProtKB/Swiss-Prot
Pfam S_100 UniProtKB/Swiss-Prot
PhenoGen S100a14 PhenoGen
SMART S_100 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF47473 UniProtKB/Swiss-Prot
UniProt E9Q2K8 ENTREZGENE, UniProtKB/TrEMBL
  Q9D1D8 ENTREZGENE
  Q9D2Q8 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q9D1D8 UniProtKB/Swiss-Prot