1810007C17Rik (RIKEN cDNA 1810007C17 gene) - Rat Genome Database

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Gene: 1810007C17Rik (RIKEN cDNA 1810007C17 gene) Mus musculus
Analyze
Symbol: 1810007C17Rik
Name: RIKEN cDNA 1810007C17 gene
RGD ID: 1613168
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: hypothetical protein LOC69054; uncharacterized protein LOC69054
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391249,523,776 - 49,527,645 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1249,523,774 - 49,527,645 (-)EnsemblGRCm39 Ensembl
GRCm381249,476,993 - 49,480,862 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1249,476,991 - 49,480,862 (-)EnsemblGRCm38mm10GRCm38
Celera1250,796,697 - 50,800,566 (-)NCBICelera
Cytogenetic Map12B3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073   PMID:24316575  


Genomics

Variants

.
Variants in 1810007C17Rik
17 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12541844077031203Mouse
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12955000084146774Mouse
13524843Ppiq8_mprepulse inhibition QTL 8 (mouse)121104319450945796Mouse
13207568Tcq14_mtotal cholesterol QTL 14 (mouse)121166000197176774Mouse
13524839Ppiq10_mprepulse inhibition QTL 10 (mouse)121304319554945798Mouse
1558978Cplaq10_mcircadian period of locomotor activity 10 (mouse)Not determined121534102679040364Mouse
1301574Lmblgq5_mlimb length QTL 5 (mouse)Not determined121759644780956883Mouse
15039339Nmrs29_mNAFLD-associated magnetic resonance shift 29 (mouse)121782585251825852Mouse
10043848Hdlq90_mHDL QTL 90 (mouse)Not determined121783993951840081Mouse
1300870Ath18_matherosclerosis 18 (mouse)Not determined121825996652260067Mouse
12904956Edlmmq10_mextensor digitorum longus muscle mass QTL 10 (mouse)121973983353739833Mouse
1302172Skts5_mskin tumor susceptibility 5 (mouse)Not determined122214886656149016Mouse
1301989Hdlq18_mHDL QTL 18 (mouse)Not determined122916068563160884Mouse
1300636Gct2_mgranulosa cell tumorigenesis 2 (mouse)Not determined122916068563160884Mouse
4141843Moen3_mmodifier of engrailed QTL 3 (mouse)Not determined122980158463801733Mouse
14747008Mancz10_mmandible centroid size 10 (mouse)122986352263863522Mouse
10402492Dipa8_mdrug induced psychomotor activation 8 (mouse)Not determined123493387268934019Mouse
1300818Bbaa10_mB.burgdorferi-associated arthritis 10 (mouse)Not determined123509100465511019Mouse
4142002Tbqt3_mtibia bone quality traits 3 (mouse)Not determined1235285496109936243Mouse
1357479Splwt1_mspleen weight 1 (mouse)Not determined124169317590887526Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000187665
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1249,523,774 - 49,527,645 (-)Ensembl
GRCm38.p6 Ensembl1249,476,991 - 49,480,862 (-)Ensembl
RefSeq Acc Id: NR_045472
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391249,523,776 - 49,527,645 (-)NCBI
GRCm381249,476,993 - 49,480,862 (-)ENTREZGENE
Celera1250,796,697 - 50,800,566 (-)ENTREZGENE
cM Map12 ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000100844 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000187665 ENTREZGENE
MGD MGI:1916304 ENTREZGENE
NCBI Gene 69054 ENTREZGENE
PhenoGen 1810007C17Rik PhenoGen
RNAcentral URS000075CF81 RNACentral