1700022H16Rik (RIKEN cDNA 1700022H16 gene) - Rat Genome Database

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Gene: 1700022H16Rik (RIKEN cDNA 1700022H16 gene) Mus musculus
Analyze
Symbol: 1700022H16Rik
Name: RIKEN cDNA 1700022H16 gene
RGD ID: 1611427
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: PREDICTED
Previously known as: hypothetical protein LOC69420; uncharacterized protein LOC69420
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39129,615,236 - 9,620,585 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl129,615,236 - 9,620,585 (-)EnsemblGRCm39 Ensembl
GRCm38129,565,236 - 9,570,585 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl129,565,236 - 9,570,585 (-)EnsemblGRCm38mm10GRCm38
Celera129,946,944 - 9,952,339 (-)NCBICelera
Cytogenetic Map12A1.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073   PMID:24316575  


Genomics

Variants

.
Variants in 1700022H16Rik
105 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11039525Tbbr2_mTrypanosoma brucei brucei response 2 (mouse)12122418579Mouse
1301393Dyscalc3_mdystrophic cardiac calcinosis 3 (mouse)Not determined12122418579Mouse
10402496Lmr22_mleishmaniasis resistance 22 (mouse)Not determined12122418579Mouse
1301143Skull17_mskull morphology 17 (mouse)Not determined12122418579Mouse
1357519Vtbt12_mvertebral trabecular bone trait 12 (mouse)Not determined12124662697Mouse
1301655Bmd12_mbone mineral density 12 (mouse)Not determined12124662697Mouse
4141296Femwf9_mfemur work to failure 9 (mouse)Not determined127920733Mouse
4141436Chldq7_mcholesterol and HDL QTL 7 (mouse)Not determined12127920733Mouse
12910983Pifs1_mpeptide-induced fatal syndrome 1 (mouse)12130433078Mouse
1301925Ath6_matherosclerosis 6 (mouse)Not determined12132758756Mouse
1301207Circp1_mcircadian photosensitivity 1 (mouse)Not determined12133430339Mouse
4141660Nbwa1_mNZB and NZW autoimmunity 1 (mouse)Not determined1234013434340302Mouse
26884410Bzwq15_mbi-zygomatic width QTL 15, 16 week (mouse)12365000029749999Mouse
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12541844077031203Mouse
1301163Eae16_msusceptibility to experimental allergic encephalomyelitis 16 (mouse)Not determined12772315841723301Mouse
13208568Bmiq11_mbody mass index QTL 11 (mouse)12805000040049999Mouse
25394547Skmw75_mskeletal muscle weight 75, gastroc (mouse)12821257610451853Mouse
1301037Cd4ts5_mCD4 T cell subset 5 (mouse)Not determined12835244442352581Mouse
1301723Fcsa7_mfemoral cross-sectional area 7 (mouse)Not determined12949100443491112Mouse
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12955000084146774Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000188935
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl129,615,236 - 9,620,585 (-)Ensembl
GRCm38.p6 Ensembl129,565,236 - 9,570,585 (-)Ensembl
RefSeq Acc Id: NR_045488
RefSeq Status: PREDICTED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39129,615,236 - 9,620,585 (-)NCBI
GRCm38129,565,236 - 9,570,585 (-)ENTREZGENE
Celera129,946,944 - 9,952,339 (-)ENTREZGENE
cM Map12 ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000099360 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000188935 ENTREZGENE
MGD MGI:1916670 ENTREZGENE
NCBI Gene 69420 ENTREZGENE
PhenoGen 1700022H16Rik PhenoGen
RNAcentral URS000075C847 RNACentral