Rnf169 (ring finger protein 169) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Rnf169 (ring finger protein 169) Mus musculus
Analyze
Symbol: Rnf169
Name: ring finger protein 169
RGD ID: 1608452
MGI Page MGI
Description: Predicted to enable modification-dependent protein binding activity; nucleosome binding activity; and ubiquitin-protein transferase activity. Predicted to be involved in double-strand break repair via homologous recombination and negative regulation of double-strand break repair. Predicted to act upstream of or within DNA repair. Predicted to be located in cytosol; nuclear body; and nucleolus. Predicted to be active in nucleus and site of double-strand break. Is expressed in nervous system and retina. Orthologous to human RNF169 (ring finger protein 169).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 2900057K09Rik; E3 ubiquitin-protein ligase RNF169; RING-type E3 ubiquitin transferase RNF169
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39799,569,461 - 99,630,537 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl799,569,461 - 99,629,655 (-)EnsemblGRCm39 Ensembl
GRCm38799,920,254 - 99,981,330 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl799,920,254 - 99,980,448 (-)EnsemblGRCm38mm10GRCm38
MGSCv377107,068,764 - 107,128,968 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Celera7100,247,022 - 100,312,258 (-)NCBICelera
Cytogenetic Map7E2NCBI
cM Map754.22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15226823   PMID:15368895  
PMID:15741177   PMID:16141072   PMID:16141073   PMID:18799693   PMID:21873635   PMID:32325033  


Genomics

Comparative Map Data
Rnf169
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39799,569,461 - 99,630,537 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl799,569,461 - 99,629,655 (-)EnsemblGRCm39 Ensembl
GRCm38799,920,254 - 99,981,330 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl799,920,254 - 99,980,448 (-)EnsemblGRCm38mm10GRCm38
MGSCv377107,068,764 - 107,128,968 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Celera7100,247,022 - 100,312,258 (-)NCBICelera
Cytogenetic Map7E2NCBI
cM Map754.22NCBI
RNF169
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381174,748,849 - 74,842,413 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1174,748,849 - 74,842,413 (+)EnsemblGRCh38hg38GRCh38
GRCh371174,459,894 - 74,553,458 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361174,137,561 - 74,231,106 (+)NCBINCBI36Build 36hg18NCBI36
Celera1171,766,783 - 71,860,010 (+)NCBICelera
Cytogenetic Map11q13.4NCBI
HuRef1170,756,304 - 70,849,805 (+)NCBIHuRef
CHM1_11174,343,601 - 74,436,856 (+)NCBICHM1_1
T2T-CHM13v2.01174,678,364 - 74,771,928 (+)NCBIT2T-CHM13v2.0
Rnf169
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81163,662,582 - 163,724,154 (-)NCBIGRCr8
mRatBN7.21154,250,462 - 154,311,867 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1154,254,473 - 154,311,653 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01164,917,069 - 164,978,061 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1164,922,080 - 164,977,633 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01171,119,356 - 171,180,334 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41157,289,186 - 157,313,978 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1152,335,857 - 152,397,398 (-)NCBICelera
Cytogenetic Map1q32NCBI
Rnf169
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541416,899,155 - 16,962,381 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541416,899,101 - 16,962,690 (-)NCBIChiLan1.0ChiLan1.0
RNF169
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2975,690,690 - 75,778,131 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11176,735,121 - 76,820,238 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01169,821,842 - 69,909,297 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11173,126,127 - 73,213,002 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1173,126,127 - 73,207,340 (+)Ensemblpanpan1.1panPan2
RNF169
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12123,574,478 - 23,655,305 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2123,579,370 - 23,655,290 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2123,339,276 - 23,420,502 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02123,776,256 - 23,857,912 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2123,779,418 - 23,857,897 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12123,574,383 - 23,655,483 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02123,771,964 - 23,852,369 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02123,688,567 - 23,769,927 (-)NCBIUU_Cfam_GSD_1.0
Rnf169
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494762,075,472 - 62,185,051 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364983,685,572 - 3,776,466 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364983,675,075 - 3,783,514 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RNF169
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl99,069,617 - 9,173,915 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.199,069,776 - 9,177,367 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2910,202,464 - 10,228,853 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RNF169
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1165,990,538 - 66,080,163 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604359,731,765 - 59,825,611 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rnf169
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248172,277,222 - 2,371,105 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248172,272,874 - 2,371,168 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rnf169
2156 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2443
Count of miRNA genes:853
Interacting mature miRNAs:1148
Transcripts:ENSMUST00000080817, ENSMUST00000174264
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined739673887103510010Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
13208555Lgth10_mbody length 10 (mouse)751649748125599172Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
25823170Hrsq7_mhost response to SARS QTL 7, log titer (mouse)754819589116822815Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)761749748121399223Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)761749748123699223Mouse
25314305Vmm6_mvariable multisystem mineralization 6, eye (mouse)761849748102749207Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765249748126499172Mouse
11553865Stmm1c_mskin tumor modifier of MSM 1c (mouse)76578898699788986Mouse
11553866Stmm1d_mskin tumor modifier of MSM 1d (mouse)76578898699788986Mouse
1301826Pgia3_mproteoglycan induced arthritis 3 (mouse)Not determined767290094101290240Mouse
1301784Ses2_msalmonella enteritidis susceptibility 2 (mouse)Not determined767290094101290240Mouse
1300620Pgia21_mproteoglycan induced arthritis 21 (mouse)Not determined767290094101290240Mouse
26884418Bzwq7_mbi-zygomatic width QTL 7, 10 week (mouse)767849748105449207Mouse
27226715Metcl3_mmetatarsal-calcaneal length 3, 5 week (mouse)767849748119499223Mouse
26884444Sklq8_mskull length QTL 8, 10 week (mouse)767849748124199223Mouse
26884451Sklq14_mskull length QTL 14, 16 week (mouse)767849748124999172Mouse
1300654Bomd1_mbone mineral density 1 (mouse)Not determined768365595102365702Mouse
27095907Scvln4_msacral vertebrae length 2, 5 week (mouse)769949748120499223Mouse
1301155Bpq7_mblood pressure QTL 7 (mouse)Not determined770143137104143379Mouse
10043973Obq29_mobesity QTL 29 (mouse)Not determined772263372106263372Mouse
27095910Pglq13_mpelvic girdle length QTL 13, 16 week (mouse)773049748125699172Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
11553869Stmm2b_mskin tumor modifier of MSM 2a (mouse)773725965107725965Mouse
27226745Metcl9_mmetatarsal-calcaneal length 9, 10 week (mouse)774849748122199223Mouse
27226781Tibl3_mtibia length 3, 5 week (mouse)774849748122199223Mouse
1301566Adip3_madiposity 3 (mouse)Not determined775394215109394346Mouse
14746989Manh62_mmandible shape 62 (mouse)775742528109742528Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse
10412110Cctq1_mcentral corneal thickness QTL 1 (mouse)Not determined780551681114551791Mouse
4142500Morq1_mmodifier of Rs1 QTL 1 (mouse)Not determined80551681114551791Mouse
27095930Ulnl10_mulna length 10, 16 week (mouse)780849748126699172Mouse
27095923Pglq3_mpelvic girdle length QTL 3, 5 week (mouse)781249748124199223Mouse
27095903Scvln10_msacral vertebrae length 2, 10 week (mouse)781449748126499172Mouse
27226765Tibl18_mtibia length 18, 16 week (mouse)781849748126499172Mouse
27226763Feml20_mfemur length 20, 16 week (mouse)785049208124199223Mouse
1301997Cia7_mcollagen induced arthritis QTL 7 (mouse)Not determined785365595112533819Mouse
1301647Elpt_melevated leptin (mouse)Not determined786500186120500329Mouse
1301188Heal6_mwound healing/regeneration 6 (mouse)Not determined787043932121044066Mouse
1302062Stheal6_msoft tissue heal 6 (mouse)Not determined787043932121044066Mouse
13463473Hbbcq4_mhemoglobin concentration QTL 4 (mouse)787043932121044066Mouse
1301781Capsq3_mcapsaicin sensitivity related QTL 3 (mouse)Not determined787143137119485380Mouse
27226769Tibl12_mtibia length 12, 10 week (mouse)787249208126499172Mouse
27226790Feml15_mfemur length 15, 10 week (mouse)787249208126499172Mouse
27095929Pglq8_mpelvic girdle length QTL 8, 10 week (mouse)787849208108099207Mouse
1357664Nba3_mNew Zealand Black autoimmunity 3 (mouse)Not determined791482996125483156Mouse
1301937Skull10_mskull morphology 10 (mouse)Not determined791482996125483156Mouse
13464255Ifvrq2_minfluenza virus resistance QTL 2 (mouse)792500698106455693Mouse
1300528Ssial3_msusceptibility to sialadenitis 3 (mouse)Not determined793391848127392041Mouse
1301478Eae26_msusceptibility to experimental allergic encephalomyelitis 26 (mouse)Not determined798164922132165010Mouse
13524850Asrq7_macoustic startle response 7 (mouse)798394974132394974Mouse

Markers in Region
RH124875  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38799,965,867 - 99,966,094UniSTSGRCm38
MGSCv377107,114,377 - 107,114,604UniSTSGRCm37
Celera7100,293,016 - 100,293,243UniSTS
Cytogenetic Map7E1UniSTS
RH124899  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38799,936,605 - 99,936,737UniSTSGRCm38
MGSCv377107,085,115 - 107,085,247UniSTSGRCm37
Celera7100,263,393 - 100,263,525UniSTS
Cytogenetic Map7E1UniSTS
RH135181  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38799,920,574 - 99,920,778UniSTSGRCm38
MGSCv377107,069,084 - 107,069,288UniSTSGRCm37
Celera7100,247,342 - 100,247,546UniSTS
Cytogenetic Map7E1UniSTS
RH80644  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38799,945,676 - 99,945,839UniSTSGRCm38
MGSCv377107,094,186 - 107,094,349UniSTSGRCm37
Celera7100,272,487 - 100,272,650UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7E1UniSTS
RH125893  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38799,936,426 - 99,936,675UniSTSGRCm38
MGSCv377107,084,936 - 107,085,185UniSTSGRCm37
Celera7100,263,214 - 100,263,463UniSTS
Cytogenetic Map7E1UniSTS
cM Map749.3UniSTS
Whitehead/MRC_RH71012.45UniSTS
UniSTS:493126  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38173,043,906 - 3,044,753UniSTSGRCm38
GRCm38799,945,042 - 99,945,837UniSTSGRCm38
MGSCv37173,043,906 - 3,044,753UniSTSGRCm37
MGSCv377107,093,552 - 107,094,347UniSTSGRCm37
Celera7100,271,853 - 100,272,648UniSTS
Celera173,583,198 - 3,584,046UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7E1UniSTS
UniSTS:494397  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38799,931,128 - 99,932,444UniSTSGRCm38
MGSCv377107,079,638 - 107,080,954UniSTSGRCm37
Celera7100,257,877 - 100,259,193UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map7E2UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000080817   ⟹   ENSMUSP00000079631
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl799,569,461 - 99,629,655 (-)Ensembl
GRCm38.p6 Ensembl799,920,254 - 99,980,448 (-)Ensembl
RefSeq Acc Id: ENSMUST00000174264
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl799,584,485 - 99,614,941 (-)Ensembl
GRCm38.p6 Ensembl799,935,278 - 99,965,734 (-)Ensembl
RefSeq Acc Id: NM_175388   ⟹   NP_780597
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39799,569,461 - 99,629,665 (-)NCBI
GRCm38799,920,254 - 99,980,458 (-)NCBI
MGSCv377107,068,764 - 107,128,968 (-)RGD
Celera7100,247,022 - 100,312,258 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006507185   ⟹   XP_006507248
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39799,569,461 - 99,630,537 (-)NCBI
GRCm38799,920,254 - 99,981,330 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006507187   ⟹   XP_006507250
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39799,569,461 - 99,630,537 (-)NCBI
GRCm38799,920,254 - 99,980,003 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006507188   ⟹   XP_006507251
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39799,584,545 - 99,630,537 (-)NCBI
GRCm38799,940,439 - 99,981,330 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030241982   ⟹   XP_030097842
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39799,569,461 - 99,630,537 (-)NCBI
GRCm38799,920,254 - 99,980,003 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_780597   ⟸   NM_175388
- UniProtKB: Q69Z47 (UniProtKB/Swiss-Prot),   E9Q7F2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006507248   ⟸   XM_006507185
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006507250   ⟸   XM_006507187
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006507251   ⟸   XM_006507188
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_030097842   ⟸   XM_030241982
- Peptide Label: isoform X2
RefSeq Acc Id: ENSMUSP00000079631   ⟸   ENSMUST00000080817

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-E9Q7F2-F1-model_v2 AlphaFold E9Q7F2 1-694 view protein structure

Promoters
RGD ID:8664899
Promoter ID:EPDNEW_M10481
Type:multiple initiation site
Name:Rnf169_1
Description:Mus musculus ring finger protein 169 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38799,980,448 - 99,980,508EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1920257 AgrOrtholog
Ensembl Genes ENSMUSG00000058761 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000080817 ENTREZGENE
  ENSMUST00000080817.6 UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.40.10 UniProtKB/Swiss-Prot
InterPro Znf_RING UniProtKB/Swiss-Prot
  Znf_RING/FYVE/PHD UniProtKB/Swiss-Prot
KEGG Report mmu:108937 UniProtKB/Swiss-Prot
MGD MGI:1920257 ENTREZGENE
NCBI Gene 108937 ENTREZGENE
PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF169 UniProtKB/Swiss-Prot
  UNCHARACTERIZED UniProtKB/Swiss-Prot
PhenoGen Rnf169 PhenoGen
PROSITE ZF_RING_2 UniProtKB/Swiss-Prot
Superfamily-SCOP RING/U-box UniProtKB/Swiss-Prot
UniProt E9Q7F2 ENTREZGENE
  Q69Z47 ENTREZGENE
  Q8C6B8_MOUSE UniProtKB/TrEMBL
  RN169_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q69Z47 UniProtKB/Swiss-Prot