Mir182 (microRNA 182) - Rat Genome Database

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Gene: Mir182 (microRNA 182) Mus musculus
Analyze
Symbol: Mir182
Name: microRNA 182
RGD ID: 1608314
MGI Page MGI
Description: Acts upstream of or within with a negative effect on gene expression. Acts upstream of or within several processes, including cellular response to leukemia inhibitory factor; cellular response to lipopolysaccharide; and retinal cone cell development. Is expressed in several structures, including epithelium; eye; inner ear; lung; and nervous system. Orthologous to human MIR182 (microRNA 182).
Type: ncrna (Ensembl: miRNA)
RefSeq Status: PROVISIONAL
Previously known as: mir-182; Mirn; Mirn182; mmu-mir-1; mmu-mir-182
RGD Orthologs
Human
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39630,165,917 - 30,165,991 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl630,165,917 - 30,165,991 (-)EnsemblGRCm39 Ensembl
GRCm38630,165,918 - 30,165,992 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl630,165,918 - 30,165,992 (-)EnsemblGRCm38mm10GRCm38
MGSCv37630,115,918 - 30,115,992 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Celera630,172,634 - 30,172,708 (-)NCBICelera
Cytogenetic Map6A3.3NCBI
cM Map612.52NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12554859   PMID:15538371   PMID:16369549   PMID:16381832   PMID:16682203   PMID:17251443   PMID:17369397   PMID:17597072   PMID:17604727   PMID:18452032   PMID:19279690   PMID:19416898  
PMID:19559694   PMID:19602392   PMID:19933188   PMID:20215419   PMID:20413612   PMID:20439489   PMID:20467336   PMID:20478254   PMID:20668074   PMID:21037258   PMID:21247879   PMID:21267068  
PMID:21360794   PMID:21518438   PMID:21768104   PMID:21822254   PMID:22300508   PMID:22381690   PMID:22431396   PMID:22889583   PMID:23341629   PMID:23646144   PMID:23823476   PMID:23825948  
PMID:23946534   PMID:24871856   PMID:24886554   PMID:25002228   PMID:25180607   PMID:25672759   PMID:25978641   PMID:26041499   PMID:26234681   PMID:26314219   PMID:26387953   PMID:26681446  
PMID:26849109   PMID:26888314   PMID:27035623   PMID:27183593   PMID:27207535   PMID:27242323   PMID:27396327   PMID:27556515   PMID:27607577   PMID:27664932   PMID:27893611   PMID:27923913  
PMID:28013219   PMID:28248712   PMID:28484004   PMID:28663557   PMID:28819115   PMID:28855441   PMID:28941704   PMID:29074972   PMID:29226948   PMID:29476110   PMID:30126905   PMID:30291236  
PMID:30308195   PMID:30575790   PMID:30578296   PMID:30625496   PMID:30924851   PMID:31318050   PMID:31411745   PMID:31884830   PMID:31908034   PMID:31942002   PMID:32003008   PMID:32376213  
PMID:32510855   PMID:32593214   PMID:32736708   PMID:32808351   PMID:33208381   PMID:33221374   PMID:33318051   PMID:33443164   PMID:34264867   PMID:34623552   PMID:34919120   PMID:35105806  
PMID:35330559   PMID:35378241   PMID:35550871   PMID:35873462   PMID:35915318   PMID:35951202   PMID:36111980   PMID:36148947   PMID:36593968   PMID:37021573   PMID:37530910   PMID:37536656  
PMID:38266777   PMID:38528641  


Genomics

Comparative Map Data
Mir182
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39630,165,917 - 30,165,991 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl630,165,917 - 30,165,991 (-)EnsemblGRCm39 Ensembl
GRCm38630,165,918 - 30,165,992 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl630,165,918 - 30,165,992 (-)EnsemblGRCm38mm10GRCm38
MGSCv37630,115,918 - 30,115,992 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Celera630,172,634 - 30,172,708 (-)NCBICelera
Cytogenetic Map6A3.3NCBI
cM Map612.52NCBI
MIR182
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387129,770,383 - 129,770,492 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7129,770,383 - 129,770,492 (-)EnsemblGRCh38hg38GRCh38
GRCh377129,410,223 - 129,410,332 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367129,197,458 - 129,197,567 (-)NCBINCBI36Build 36hg18NCBI36
Celera7124,205,968 - 124,206,077 (-)NCBICelera
Cytogenetic Map7q32.2NCBI
HuRef7123,771,508 - 123,771,617 (-)NCBIHuRef
CHM1_17129,343,614 - 129,343,723 (-)NCBICHM1_1
T2T-CHM13v2.07131,083,517 - 131,083,626 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27128,794,499 - 128,794,608 (-)NCBI

miRNA Target Status

Predicted Targets
Summary Value
Count of predictions:22797
Count of gene targets:9226
Count of transcripts:15201
Interacting mature miRNAs:mmu-miR-182-3p, mmu-miR-182-5p
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396633110Mouse
10043869Cia6a_mcollagen induced arthritis QTL 6a (mouse)Not determined61211797146118069Mouse
12904943Tammq4_mtibialis anterior muscle mass QTL 4 (mouse)61961634653616346Mouse
1302024Skull7_mskull morphology 7 (mouse)Not determined6132144495Mouse
1302051Sluc7_msusceptibility to lung cancer 7 (mouse)Not determined6929707443297168Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396633110Mouse
26884441Sklq3_mskull length QTL 3, 5 week (mouse)6760000080576983Mouse
5491191Mobq2_mmultigenic obesity QTL 2 (mouse)Not determined6132144495Mouse
15039372Nmrs22_mNAFLD-associated magnetic resonance shift 22 (mouse)6147633435476334Mouse
4141749Obrq2_mobesity resistance QTL 2 (mouse)Not determined1275122146751333Mouse
1301131Chol2_mcholesterol 2 (mouse)Not determined6132144495Mouse
4140989Spqq2_msperm quality QTL 2 (mouse)Not determined1771159851711719Mouse
12904940Edlmmq5_mextensor digitorum longus muscle mass QTL 5 (mouse)61961634653616346Mouse
10412213Sxbq2_mSGC/Knj cross B6 QTL 2 (mouse)Not determined61991268571299759Mouse
11353841Bmiq3_mbody mass index QTL 3 (mouse)6450382348703611Mouse
13208564Bmiq7_mbody mass index QTL 7 (mouse)62499999979976983Mouse
11353840Bmiq2_mbody mass index QTL 2 (mouse)6450382345291115Mouse
1301724Pcd4ts1_mp-glycoprotein positive CD4 T cell subset 1 (mouse)Not determined61771159851711719Mouse
10412107Desp4_mdespair 4 (mouse)Not determined62004983054049830Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
27226726Tibmd7_mtibia midshaft diameter 7, 16 week (mouse)61769999953476985Mouse
1301998Bts2_mbladder tumor susceptibility 2 (mouse)Not determined61275122146751333Mouse
12904952Gmmq4_mgastrocnemius muscle mass QTL 4 (mouse)61961634653616346Mouse
1357520Axtq2_manxiety QTL 2 (mouse)Not determined6450382348703611Mouse
1300731Smdq3_msegregation of mitochondrial DNA QTL 3 (mouse)Not determined6424920638249325Mouse
1301850Fglu_mfasting glucose (mouse)Not determined61771159851711719Mouse
1357442Dbts1_mdiabetes 1 (mouse)Not determined61823414773364675Mouse
1357481Aaj2_manxiety in A/J 2 (mouse)Not determined6450382348703611Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396633110Mouse
14700690Ccs6_mcolon cancer susceptibility 6 (mouse)62377693457776934Mouse
4141988Obrq3_mobesity resistance QTL 3 (mouse)Not determined2829099362291115Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)63050001117476961Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487403016Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396633110Mouse

Markers in Region
Mir182  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38630,165,773 - 30,166,779UniSTSGRCm38
MGSCv37630,115,773 - 30,116,779UniSTSGRCm37
Celera630,172,489 - 30,173,608UniSTS
cM Map6 UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000102406
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl630,165,917 - 30,165,991 (-)Ensembl
GRCm38.p6 Ensembl630,165,918 - 30,165,992 (-)Ensembl
RefSeq Acc Id: NR_029569
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39630,165,917 - 30,165,991 (-)NCBI
GRCm38630,165,918 - 30,165,992 (-)ENTREZGENE
MGSCv37630,115,918 - 30,115,992 (-)RGD
Celera630,172,634 - 30,172,708 (-)RGD
cM Map6 ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2676846 AgrOrtholog
Ensembl Genes ENSMUSG00000076361 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000102406 ENTREZGENE
MGD MGI:2676846 ENTREZGENE
miRBase MI0000224 ENTREZGENE
NCBI Gene 387177 ENTREZGENE
PhenoGen Mir182 PhenoGen
RNAcentral URS00003D5044 RNACentral
  URS000059D941 RNACentral
  URS000075DA6B RNACentral