AASDH (aminoadipate-semialdehyde dehydrogenase) - Rat Genome Database

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Gene: AASDH (aminoadipate-semialdehyde dehydrogenase) Homo sapiens
Analyze
Symbol: AASDH
Name: aminoadipate-semialdehyde dehydrogenase
RGD ID: 1606160
HGNC Page HGNC:23993
Description: Predicted to enable acid-thiol ligase activity. Predicted to be involved in fatty acid metabolic process. Predicted to act upstream of or within amino acid activation for nonribosomal peptide biosynthetic process and beta-alanine metabolic process. Predicted to be located in membrane.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: 2-aminoadipic 6-semialdehyde dehydrogenase; ACSF4; acyl-CoA synthetase family member 4; beta-alanine-activating enzyme; LYS2; non-ribosomal peptide synthetase 1098; non-ribosomal peptide synthetase 998; NRPS1098; NRPS998
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38456,338,290 - 56,387,491 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl456,338,287 - 56,387,508 (-)EnsemblGRCh38hg38GRCh38
GRCh37457,204,456 - 57,253,657 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36456,899,213 - 56,948,395 (-)NCBINCBI36Build 36hg18NCBI36
Celera454,710,829 - 54,760,021 (-)NCBICelera
Cytogenetic Map4q12NCBI
HuRef453,158,378 - 53,207,773 (-)NCBIHuRef
CHM1_1457,239,570 - 57,288,751 (-)NCBICHM1_1
T2T-CHM13v2.0459,826,269 - 59,875,493 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11230166   PMID:12477932   PMID:12712191   PMID:15198809   PMID:15865210   PMID:17762044   PMID:21873635   PMID:24467666   PMID:26496610   PMID:28065597   PMID:28514442   PMID:30021884  
PMID:33961781   PMID:37689310  


Genomics

Comparative Map Data
AASDH
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38456,338,290 - 56,387,491 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl456,338,287 - 56,387,508 (-)EnsemblGRCh38hg38GRCh38
GRCh37457,204,456 - 57,253,657 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36456,899,213 - 56,948,395 (-)NCBINCBI36Build 36hg18NCBI36
Celera454,710,829 - 54,760,021 (-)NCBICelera
Cytogenetic Map4q12NCBI
HuRef453,158,378 - 53,207,773 (-)NCBIHuRef
CHM1_1457,239,570 - 57,288,751 (-)NCBICHM1_1
T2T-CHM13v2.0459,826,269 - 59,875,493 (-)NCBIT2T-CHM13v2.0
Aasdh
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39577,021,506 - 77,053,376 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl577,021,506 - 77,053,361 (-)EnsemblGRCm39 Ensembl
GRCm38576,873,659 - 76,905,529 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl576,873,659 - 76,905,514 (-)EnsemblGRCm38mm10GRCm38
MGSCv37577,304,960 - 77,334,539 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36577,950,713 - 77,993,728 (-)NCBIMGSCv36mm8
Celera574,152,121 - 74,182,004 (-)NCBICelera
Cytogenetic Map5C3.3NCBI
cM Map541.45NCBI
Aasdh
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81431,609,488 - 31,636,066 (+)NCBIGRCr8
mRatBN7.21431,255,019 - 31,281,802 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1431,255,310 - 31,281,796 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1431,632,462 - 31,659,180 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01432,940,802 - 32,967,520 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01431,425,469 - 31,452,187 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01433,619,990 - 33,647,268 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1433,624,390 - 33,647,180 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01433,410,917 - 33,438,181 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41433,553,214 - 33,575,421 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11433,553,200 - 33,575,421 (+)NCBI
Celera1430,569,108 - 30,595,707 (+)NCBICelera
Cytogenetic Map14p11NCBI
Aasdh
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544714,622,728 - 14,648,005 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544714,623,532 - 14,648,121 (+)NCBIChiLan1.0ChiLan1.0
AASDH
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2373,391,262 - 73,447,335 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1473,596,720 - 73,662,401 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0467,536,000 - 67,591,204 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1474,107,854 - 74,159,927 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl474,110,736 - 74,159,809 (+)Ensemblpanpan1.1panPan2
AASDH
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11348,574,839 - 48,611,770 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1348,572,220 - 48,611,775 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1348,465,553 - 48,502,540 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01349,189,413 - 49,226,415 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1349,186,794 - 49,226,403 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11348,861,363 - 48,898,350 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01348,390,337 - 48,427,317 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01349,336,285 - 49,373,201 (-)NCBIUU_Cfam_GSD_1.0
Aasdh
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528527,707,855 - 27,739,043 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648218,558,943 - 18,590,297 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648218,558,789 - 18,591,709 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AASDH
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl855,604,626 - 55,645,473 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1855,604,394 - 55,645,536 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2857,986,062 - 57,998,070 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AASDH
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1712,248,193 - 12,292,027 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl712,249,208 - 12,296,516 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606612,918,085 - 12,962,654 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aasdh
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476113,026,213 - 13,064,708 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476113,026,875 - 13,063,511 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in AASDH
41 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 4p13-q13.1(chr4:44356201-62245882)x3 copy number gain See cases [RCV000050683] Chr4:44356201..62245882 [GRCh38]
Chr4:44358218..63111600 [GRCh37]
Chr4:44052975..62794195 [NCBI36]
Chr4:4p13-q13.1
pathogenic
GRCh38/hg38 4q12(chr4:56301201-56829410)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051598]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051598]|See cases [RCV000051598] Chr4:56301201..56829410 [GRCh38]
Chr4:57167367..57695576 [GRCh37]
Chr4:56862124..57390333 [NCBI36]
Chr4:4q12
uncertain significance
GRCh38/hg38 4q12-13.1(chr4:51899860-59984479)x3 copy number gain See cases [RCV000051773] Chr4:51899860..59984479 [GRCh38]
Chr4:52766026..60850197 [GRCh37]
Chr4:52460783..60532792 [NCBI36]
Chr4:4q12-13.1
pathogenic
GRCh38/hg38 4q12-13.2(chr4:51831622-66991489)x3 copy number gain See cases [RCV000051771] Chr4:51831622..66991489 [GRCh38]
Chr4:52697788..67857207 [GRCh37]
Chr4:52392545..67539802 [NCBI36]
Chr4:4q12-13.2
pathogenic
GRCh38/hg38 4q12-22.3(chr4:51831622-97505618)x3 copy number gain See cases [RCV000051772] Chr4:51831622..97505618 [GRCh38]
Chr4:52697788..98426769 [GRCh37]
Chr4:52392545..98645792 [NCBI36]
Chr4:4q12-22.3
pathogenic
GRCh38/hg38 4q12-13.1(chr4:52639018-59984479)x1 copy number loss See cases [RCV000053265] Chr4:52639018..59984479 [GRCh38]
Chr4:53505185..60850197 [GRCh37]
Chr4:53199942..60532792 [NCBI36]
Chr4:4q12-13.1
pathogenic
GRCh38/hg38 4q12-13.1(chr4:54198601-62270115)x1 copy number loss See cases [RCV000053266] Chr4:54198601..62270115 [GRCh38]
Chr4:55064768..63135833 [GRCh37]
Chr4:54759525..62818428 [NCBI36]
Chr4:4q12-13.1
pathogenic
GRCh38/hg38 4q12(chr4:56248102-57218522)x4 copy number gain See cases [RCV000137649] Chr4:56248102..57218522 [GRCh38]
Chr4:57114268..58084688 [GRCh37]
Chr4:56809025..57779445 [NCBI36]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.2612T>C (p.Ile871Thr) single nucleotide variant Inborn genetic diseases [RCV003245652] Chr4:56345167 [GRCh38]
Chr4:57211333 [GRCh37]
Chr4:4q12
uncertain significance
GRCh37/hg19 4p16.3-q35.2(chr4:12440-190904441)x3 copy number gain See cases [RCV000446653] Chr4:12440..190904441 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4p16.3-q35.2(chr4:68346-190957473) copy number gain See cases [RCV000510453] Chr4:68346..190957473 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4p16.3-q13.1(chr4:68345-66440622)x3 copy number gain See cases [RCV000511193] Chr4:68345..66440622 [GRCh37]
Chr4:4p16.3-q13.1
pathogenic
NM_181806.4(AASDH):c.386A>G (p.Tyr129Cys) single nucleotide variant Inborn genetic diseases [RCV003263501] Chr4:56378430 [GRCh38]
Chr4:57244596 [GRCh37]
Chr4:4q12
uncertain significance
GRCh37/hg19 4p16.3-q35.2(chr4:68346-190957473)x3 copy number gain See cases [RCV000512241] Chr4:68346..190957473 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4q12(chr4:57036491-57206774)x1 copy number loss not provided [RCV000682405] Chr4:57036491..57206774 [GRCh37]
Chr4:4q12
uncertain significance
GRCh37/hg19 4p16.3-q35.2(chr4:49450-190915650)x3 copy number gain not provided [RCV000743155] Chr4:49450..190915650 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4q12(chr4:57204960-57390650)x3 copy number gain not provided [RCV000743590] Chr4:57204960..57390650 [GRCh37]
Chr4:4q12
benign
GRCh37/hg19 4p16.3-q35.2(chr4:49450-190963766)x3 copy number gain not provided [RCV000743156] Chr4:49450..190963766 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4p16.3-q35.2(chr4:11525-191028879)x3 copy number gain not provided [RCV000743147] Chr4:11525..191028879 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4q12(chr4:57067953-57957651)x3 copy number gain not provided [RCV001005548] Chr4:57067953..57957651 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.2939T>C (p.Phe980Ser) single nucleotide variant Inborn genetic diseases [RCV003290211] Chr4:56338760 [GRCh38]
Chr4:57204926 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.181A>G (p.Ile61Val) single nucleotide variant not provided [RCV001680191] Chr4:56384119 [GRCh38]
Chr4:57250285 [GRCh37]
Chr4:4q12
benign
GRCh38/hg38 4q12-21.1(chr4:51891814-76009719)x1 copy number loss Piebaldism [RCV001420508] Chr4:51891814..76009719 [GRCh38]
Chr4:4q12-21.1
pathogenic
GRCh37/hg19 4q12-31.21(chr4:52866944-143582507)x3 copy number gain not provided [RCV001827738] Chr4:52866944..143582507 [GRCh37]
Chr4:4q12-31.21
pathogenic
GRCh37/hg19 4q11-12(chr4:52685685-58104722)x1 copy number loss not provided [RCV001829079] Chr4:52685685..58104722 [GRCh37]
Chr4:4q11-12
pathogenic
NC_000004.11:g.(?_55124936)_(57798318_?)dup duplication TMEM165-congenital disorder of glycosylation [RCV003120758]|not provided [RCV001944395] Chr4:55124936..57798318 [GRCh37]
Chr4:4q12
uncertain significance|no classifications from unflagged records
NC_000004.11:g.(?_55124936)_(57368027_?)del deletion TMEM165-congenital disorder of glycosylation [RCV003119917]|not provided [RCV003119918] Chr4:55124936..57368027 [GRCh37]
Chr4:4q12
pathogenic|uncertain significance|no classifications from unflagged records
NM_181806.4(AASDH):c.3152A>C (p.Glu1051Ala) single nucleotide variant Inborn genetic diseases [RCV003304158] Chr4:56338547 [GRCh38]
Chr4:57204713 [GRCh37]
Chr4:4q12
uncertain significance
GRCh37/hg19 4q11-12(chr4:52685980-59272025)x3 copy number gain not provided [RCV002473779] Chr4:52685980..59272025 [GRCh37]
Chr4:4q11-12
uncertain significance
NM_181806.4(AASDH):c.2815C>G (p.Pro939Ala) single nucleotide variant Inborn genetic diseases [RCV002752436] Chr4:56342927 [GRCh38]
Chr4:57209093 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.50G>A (p.Arg17Lys) single nucleotide variant Inborn genetic diseases [RCV002685246] Chr4:56384250 [GRCh38]
Chr4:57250416 [GRCh37]
Chr4:4q12
likely benign
NM_181806.4(AASDH):c.2242A>T (p.Ile748Leu) single nucleotide variant Inborn genetic diseases [RCV002840274] Chr4:56349509 [GRCh38]
Chr4:57215675 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.3038A>G (p.Lys1013Arg) single nucleotide variant Inborn genetic diseases [RCV002860815] Chr4:56338661 [GRCh38]
Chr4:57204827 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.1489A>G (p.Ile497Val) single nucleotide variant Inborn genetic diseases [RCV002752671] Chr4:56353491 [GRCh38]
Chr4:57219657 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.1961A>C (p.Glu654Ala) single nucleotide variant Inborn genetic diseases [RCV002906826] Chr4:56349790 [GRCh38]
Chr4:57215956 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.1104A>T (p.Lys368Asn) single nucleotide variant Inborn genetic diseases [RCV002945712] Chr4:56354811 [GRCh38]
Chr4:57220977 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.3106A>G (p.Met1036Val) single nucleotide variant Inborn genetic diseases [RCV002925203] Chr4:56338593 [GRCh38]
Chr4:57204759 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.218C>A (p.Ser73Tyr) single nucleotide variant Inborn genetic diseases [RCV002845103] Chr4:56384082 [GRCh38]
Chr4:57250248 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.2827T>C (p.Ser943Pro) single nucleotide variant Inborn genetic diseases [RCV002888537] Chr4:56342915 [GRCh38]
Chr4:57209081 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.2201C>T (p.Pro734Leu) single nucleotide variant Inborn genetic diseases [RCV002950717] Chr4:56349550 [GRCh38]
Chr4:57215716 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.1174T>C (p.Phe392Leu) single nucleotide variant Inborn genetic diseases [RCV002955516] Chr4:56354741 [GRCh38]
Chr4:57220907 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.2209G>A (p.Val737Ile) single nucleotide variant Inborn genetic diseases [RCV002699014] Chr4:56349542 [GRCh38]
Chr4:57215708 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.1742T>G (p.Leu581Arg) single nucleotide variant Inborn genetic diseases [RCV002874497] Chr4:56350009 [GRCh38]
Chr4:57216175 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.568C>G (p.His190Asp) single nucleotide variant Inborn genetic diseases [RCV002697495] Chr4:56378248 [GRCh38]
Chr4:57244414 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.2259G>A (p.Met753Ile) single nucleotide variant Inborn genetic diseases [RCV002830286] Chr4:56349492 [GRCh38]
Chr4:57215658 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.2641T>G (p.Leu881Val) single nucleotide variant Inborn genetic diseases [RCV002699015] Chr4:56345138 [GRCh38]
Chr4:57211304 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.2632G>A (p.Ala878Thr) single nucleotide variant Inborn genetic diseases [RCV002767422] Chr4:56345147 [GRCh38]
Chr4:57211313 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.424T>C (p.Phe142Leu) single nucleotide variant Inborn genetic diseases [RCV002742426] Chr4:56378392 [GRCh38]
Chr4:57244558 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.1241A>G (p.Asp414Gly) single nucleotide variant Inborn genetic diseases [RCV002718758] Chr4:56354181 [GRCh38]
Chr4:57220347 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.1190G>A (p.Gly397Asp) single nucleotide variant Inborn genetic diseases [RCV002936229] Chr4:56354725 [GRCh38]
Chr4:57220891 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.280C>T (p.Pro94Ser) single nucleotide variant Inborn genetic diseases [RCV002988951] Chr4:56382548 [GRCh38]
Chr4:57248714 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.3223G>C (p.Glu1075Gln) single nucleotide variant Inborn genetic diseases [RCV002878757] Chr4:56338476 [GRCh38]
Chr4:57204642 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.835T>G (p.Ser279Ala) single nucleotide variant Inborn genetic diseases [RCV002668773] Chr4:56371477 [GRCh38]
Chr4:57237643 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.1636G>C (p.Glu546Gln) single nucleotide variant Inborn genetic diseases [RCV002835913] Chr4:56351398 [GRCh38]
Chr4:57217564 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.1096A>C (p.Thr366Pro) single nucleotide variant Inborn genetic diseases [RCV003278467] Chr4:56355189 [GRCh38]
Chr4:57221355 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.35C>G (p.Ser12Cys) single nucleotide variant Inborn genetic diseases [RCV003203020] Chr4:56384265 [GRCh38]
Chr4:57250431 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.368A>G (p.His123Arg) single nucleotide variant Inborn genetic diseases [RCV003204635] Chr4:56378448 [GRCh38]
Chr4:57244614 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.1018A>C (p.Ile340Leu) single nucleotide variant Inborn genetic diseases [RCV003219610] Chr4:56355267 [GRCh38]
Chr4:57221433 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.335A>G (p.Glu112Gly) single nucleotide variant Inborn genetic diseases [RCV003307051] Chr4:56382493 [GRCh38]
Chr4:57248659 [GRCh37]
Chr4:4q12
uncertain significance
GRCh38/hg38 4p16.3-q12(chr4:85624-57073230)x3 copy number gain Neurodevelopmental disorder [RCV003327613] Chr4:85624..57073230 [GRCh38]
Chr4:4p16.3-q12
pathogenic
NM_181806.4(AASDH):c.772T>A (p.Ser258Thr) single nucleotide variant Inborn genetic diseases [RCV003376541] Chr4:56371540 [GRCh38]
Chr4:57237706 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.459G>T (p.Leu153Phe) single nucleotide variant Inborn genetic diseases [RCV003373343] Chr4:56378357 [GRCh38]
Chr4:57244523 [GRCh37]
Chr4:4q12
uncertain significance
NM_181806.4(AASDH):c.3190C>T (p.Pro1064Ser) single nucleotide variant Inborn genetic diseases [RCV003354002] Chr4:56338509 [GRCh38]
Chr4:57204675 [GRCh37]
Chr4:4q12
uncertain significance
GRCh37/hg19 4q11-13.1(chr4:52685685-61903883)x1 copy number loss not provided [RCV003485416] Chr4:52685685..61903883 [GRCh37]
Chr4:4q11-13.1
pathogenic
NM_181806.4(AASDH):c.963G>A (p.Ala321=) single nucleotide variant not provided [RCV003439317] Chr4:56355322 [GRCh38]
Chr4:57221488 [GRCh37]
Chr4:4q12
likely benign
NM_181806.4(AASDH):c.668G>T (p.Arg223Leu) single nucleotide variant not provided [RCV003435020] Chr4:56378148 [GRCh38]
Chr4:57244314 [GRCh37]
Chr4:4q12
likely benign
NM_181806.4(AASDH):c.973T>C (p.Leu325=) single nucleotide variant not provided [RCV003439316] Chr4:56355312 [GRCh38]
Chr4:57221478 [GRCh37]
Chr4:4q12
likely benign
GRCh37/hg19 4p12-q35.2(chr4:45455621-191003541)x3 copy number gain not provided [RCV003885507] Chr4:45455621..191003541 [GRCh37]
Chr4:4p12-q35.2
pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2364
Count of miRNA genes:896
Interacting mature miRNAs:1049
Transcripts:ENST00000205214, ENST00000434343, ENST00000451613, ENST00000502617, ENST00000503808, ENST00000510012, ENST00000510762, ENST00000513376, ENST00000514745, ENST00000514796, ENST00000602986
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
D4S3000  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37457,247,778 - 57,247,930UniSTSGRCh37
Build 36456,942,535 - 56,942,687RGDNCBI36
Celera454,754,142 - 54,754,310RGD
Cytogenetic Map4q12UniSTS
HuRef453,201,890 - 53,202,058UniSTS
Marshfield Genetic Map468.94RGD
Marshfield Genetic Map468.94UniSTS
Genethon Genetic Map467.7UniSTS
deCODE Assembly Map471.58UniSTS
Whitehead-YAC Contig Map4 UniSTS
AB050266  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37457,204,824 - 57,204,930UniSTSGRCh37
Build 36456,899,581 - 56,899,687RGDNCBI36
Celera454,711,201 - 54,711,307RGD
HuRef453,158,750 - 53,158,856UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 141 49 682 26 679 19 1258 75 1091 74 635 674 14 1 85 747 4 1
Low 2298 2844 1044 598 1199 446 3099 2097 2643 345 825 939 161 1118 2041 2 1
Below cutoff 98 73 25 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_046885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001286668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001286669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001286670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001286671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001286672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001323890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001323892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001323893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001323899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_181806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA743758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC068620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF161436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF516672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK294332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK303733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK304309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK316296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY314787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY422212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC015096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC071815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC141824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC142709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX640635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX648853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC306784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000205214   ⟹   ENSP00000205214
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,338,290 - 56,387,491 (-)Ensembl
RefSeq Acc Id: ENST00000451613   ⟹   ENSP00000409656
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,338,287 - 56,387,508 (-)Ensembl
RefSeq Acc Id: ENST00000502617   ⟹   ENSP00000421171
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,348,928 - 56,387,500 (-)Ensembl
RefSeq Acc Id: ENST00000503808   ⟹   ENSP00000421658
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,338,605 - 56,387,459 (-)Ensembl
RefSeq Acc Id: ENST00000510012
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,381,759 - 56,387,472 (-)Ensembl
RefSeq Acc Id: ENST00000510762
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,355,300 - 56,387,458 (-)Ensembl
RefSeq Acc Id: ENST00000513376   ⟹   ENSP00000423760
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,338,290 - 56,387,423 (-)Ensembl
RefSeq Acc Id: ENST00000514745   ⟹   ENSP00000427298
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,338,293 - 56,387,469 (-)Ensembl
RefSeq Acc Id: ENST00000514796
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,382,424 - 56,384,299 (-)Ensembl
RefSeq Acc Id: ENST00000602986   ⟹   ENSP00000473564
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,338,287 - 56,387,508 (-)Ensembl
RefSeq Acc Id: NM_001286668   ⟹   NP_001273597
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,338,290 - 56,387,491 (-)NCBI
HuRef453,158,372 - 53,207,809 (-)NCBI
CHM1_1457,239,564 - 57,288,787 (-)NCBI
T2T-CHM13v2.0459,826,269 - 59,875,493 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001286669   ⟹   NP_001273598
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,338,290 - 56,387,491 (-)NCBI
HuRef453,158,372 - 53,207,809 (-)NCBI
CHM1_1457,239,564 - 57,288,787 (-)NCBI
T2T-CHM13v2.0459,826,269 - 59,875,493 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001286670   ⟹   NP_001273599
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,338,290 - 56,387,491 (-)NCBI
HuRef453,158,372 - 53,207,809 (-)NCBI
CHM1_1457,239,564 - 57,288,787 (-)NCBI
T2T-CHM13v2.0459,826,269 - 59,875,493 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001286671   ⟹   NP_001273600
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,338,290 - 56,387,491 (-)NCBI
HuRef453,158,372 - 53,207,809 (-)NCBI
CHM1_1457,239,564 - 57,288,787 (-)NCBI
T2T-CHM13v2.0459,826,269 - 59,875,493 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001286672   ⟹   NP_001273601
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,348,947 - 56,387,491 (-)NCBI
HuRef453,158,372 - 53,207,809 (-)NCBI
CHM1_1457,250,240 - 57,288,787 (-)NCBI
T2T-CHM13v2.0459,836,925 - 59,875,493 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001323890   ⟹   NP_001310819
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,338,290 - 56,387,491 (-)NCBI
CHM1_1457,239,564 - 57,288,787 (-)NCBI
T2T-CHM13v2.0459,826,269 - 59,875,493 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001323892   ⟹   NP_001310821
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,338,290 - 56,387,491 (-)NCBI
CHM1_1457,239,564 - 57,288,787 (-)NCBI
T2T-CHM13v2.0459,826,269 - 59,875,493 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001323893   ⟹   NP_001310822
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,338,290 - 56,387,491 (-)NCBI
CHM1_1457,239,564 - 57,288,787 (-)NCBI
T2T-CHM13v2.0459,826,269 - 59,875,493 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001323899   ⟹   NP_001310828
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,338,290 - 56,387,491 (-)NCBI
CHM1_1457,239,564 - 57,288,787 (-)NCBI
T2T-CHM13v2.0459,826,269 - 59,875,493 (-)NCBI
Sequence:
RefSeq Acc Id: NM_181806   ⟹   NP_861522
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,338,290 - 56,387,491 (-)NCBI
GRCh37457,204,450 - 57,254,265 (-)NCBI
Build 36456,899,213 - 56,948,395 (-)NCBI Archive
Celera454,710,829 - 54,760,021 (-)RGD
HuRef453,158,372 - 53,207,809 (-)NCBI
CHM1_1457,239,564 - 57,288,787 (-)NCBI
T2T-CHM13v2.0459,826,269 - 59,875,493 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017007740   ⟹   XP_016863229
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,338,290 - 56,387,491 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017007743   ⟹   XP_016863232
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,338,290 - 56,387,491 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047449614   ⟹   XP_047305570
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,338,290 - 56,387,491 (-)NCBI
RefSeq Acc Id: XM_047449615   ⟹   XP_047305571
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,338,290 - 56,378,228 (-)NCBI
RefSeq Acc Id: XM_054348939   ⟹   XP_054204914
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0459,826,269 - 59,875,493 (-)NCBI
RefSeq Acc Id: XM_054348940   ⟹   XP_054204915
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0459,826,269 - 59,875,493 (-)NCBI
RefSeq Acc Id: XM_054348941   ⟹   XP_054204916
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0459,826,269 - 59,875,493 (-)NCBI
RefSeq Acc Id: XM_054348942   ⟹   XP_054204917
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0459,826,269 - 59,866,207 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001273597 (Get FASTA)   NCBI Sequence Viewer  
  NP_001273598 (Get FASTA)   NCBI Sequence Viewer  
  NP_001273599 (Get FASTA)   NCBI Sequence Viewer  
  NP_001273600 (Get FASTA)   NCBI Sequence Viewer  
  NP_001273601 (Get FASTA)   NCBI Sequence Viewer  
  NP_001310819 (Get FASTA)   NCBI Sequence Viewer  
  NP_001310821 (Get FASTA)   NCBI Sequence Viewer  
  NP_001310822 (Get FASTA)   NCBI Sequence Viewer  
  NP_001310828 (Get FASTA)   NCBI Sequence Viewer  
  NP_861522 (Get FASTA)   NCBI Sequence Viewer  
  XP_016863229 (Get FASTA)   NCBI Sequence Viewer  
  XP_016863232 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305570 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305571 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204914 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204915 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204916 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204917 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAF28996 (Get FASTA)   NCBI Sequence Viewer  
  AAH71815 (Get FASTA)   NCBI Sequence Viewer  
  AAI41825 (Get FASTA)   NCBI Sequence Viewer  
  AAI42710 (Get FASTA)   NCBI Sequence Viewer  
  AAP76519 (Get FASTA)   NCBI Sequence Viewer  
  AAQ83120 (Get FASTA)   NCBI Sequence Viewer  
  AAR31184 (Get FASTA)   NCBI Sequence Viewer  
  BAG57604 (Get FASTA)   NCBI Sequence Viewer  
  BAG64707 (Get FASTA)   NCBI Sequence Viewer  
  BAG65162 (Get FASTA)   NCBI Sequence Viewer  
  BAH14667 (Get FASTA)   NCBI Sequence Viewer  
  CAH56130 (Get FASTA)   NCBI Sequence Viewer  
  CAH56482 (Get FASTA)   NCBI Sequence Viewer  
  EAX05484 (Get FASTA)   NCBI Sequence Viewer  
  EAX05485 (Get FASTA)   NCBI Sequence Viewer  
  EAX05486 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000205214
  ENSP00000205214.6
  ENSP00000409656
  ENSP00000409656.1
  ENSP00000421171
  ENSP00000421171.1
  ENSP00000421658.2
  ENSP00000423760
  ENSP00000423760.1
  ENSP00000427298.1
  ENSP00000473564
  ENSP00000473564.2
GenBank Protein Q4L235 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_861522   ⟸   NM_181806
- Peptide Label: isoform 1
- UniProtKB: Q96BW4 (UniProtKB/Swiss-Prot),   Q7Z5Y3 (UniProtKB/Swiss-Prot),   Q6TFZ6 (UniProtKB/Swiss-Prot),   Q6IPP8 (UniProtKB/Swiss-Prot),   Q63HR7 (UniProtKB/Swiss-Prot),   Q63HK2 (UniProtKB/Swiss-Prot),   A5PL22 (UniProtKB/Swiss-Prot),   A5D8V3 (UniProtKB/Swiss-Prot),   Q9P064 (UniProtKB/Swiss-Prot),   Q4L235 (UniProtKB/Swiss-Prot),   B4E2K0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001273597   ⟸   NM_001286668
- Peptide Label: isoform 2
- UniProtKB: B4E2K0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001273598   ⟸   NM_001286669
- Peptide Label: isoform 3
- UniProtKB: B4E2K0 (UniProtKB/TrEMBL),   R4GNB1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001273599   ⟸   NM_001286670
- Peptide Label: isoform 4
- UniProtKB: B4DFZ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001273600   ⟸   NM_001286671
- Peptide Label: isoform 5
- UniProtKB: B4E195 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001273601   ⟸   NM_001286672
- Peptide Label: isoform 6
- UniProtKB: B4E195 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001310822   ⟸   NM_001323893
- Peptide Label: isoform 9
- UniProtKB: B4E195 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001310828   ⟸   NM_001323899
- Peptide Label: isoform 10
- UniProtKB: B4DFZ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001310821   ⟸   NM_001323892
- Peptide Label: isoform 8
- UniProtKB: B4E195 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001310819   ⟸   NM_001323890
- Peptide Label: isoform 7
- UniProtKB: B4E2K0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016863232   ⟸   XM_017007743
- Peptide Label: isoform X3
- UniProtKB: B4E195 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016863229   ⟸   XM_017007740
- Peptide Label: isoform X2
- UniProtKB: B4E2K0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000421171   ⟸   ENST00000502617
RefSeq Acc Id: ENSP00000421658   ⟸   ENST00000503808
RefSeq Acc Id: ENSP00000409656   ⟸   ENST00000451613
RefSeq Acc Id: ENSP00000205214   ⟸   ENST00000205214
RefSeq Acc Id: ENSP00000473564   ⟸   ENST00000602986
RefSeq Acc Id: ENSP00000423760   ⟸   ENST00000513376
RefSeq Acc Id: ENSP00000427298   ⟸   ENST00000514745
RefSeq Acc Id: XP_047305570   ⟸   XM_047449614
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047305571   ⟸   XM_047449615
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054204916   ⟸   XM_054348941
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054204915   ⟸   XM_054348940
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054204914   ⟸   XM_054348939
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054204917   ⟸   XM_054348942
- Peptide Label: isoform X4
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q4L235-F1-model_v2 AlphaFold Q4L235 1-1098 view protein structure

Promoters
RGD ID:6867506
Promoter ID:EPDNEW_H6918
Type:initiation region
Name:AASDH_1
Description:aminoadipate-semialdehyde dehydrogenase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,387,470 - 56,387,530EPDNEW
RGD ID:6801996
Promoter ID:HG_KWN:48295
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000250780,   UC003HBO.1,   UC003HBP.2,   UC003HBQ.1,   UC010IHC.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36456,948,166 - 56,949,112 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:23993 AgrOrtholog
COSMIC AASDH COSMIC
Ensembl Genes ENSG00000157426 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000205214 ENTREZGENE
  ENST00000205214.11 UniProtKB/Swiss-Prot
  ENST00000451613 ENTREZGENE
  ENST00000451613.5 UniProtKB/Swiss-Prot
  ENST00000502617 ENTREZGENE
  ENST00000502617.1 UniProtKB/Swiss-Prot
  ENST00000503808.5 UniProtKB/TrEMBL
  ENST00000513376 ENTREZGENE
  ENST00000513376.5 UniProtKB/Swiss-Prot
  ENST00000514745.5 UniProtKB/TrEMBL
  ENST00000602986 ENTREZGENE
  ENST00000602986.5 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.40.10.480 UniProtKB/TrEMBL
  3.30.300.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.12780 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000157426 GTEx
HGNC ID HGNC:23993 ENTREZGENE
Human Proteome Map AASDH Human Proteome Map
InterPro AASDH_AMP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ACP-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AMP-bd_C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AMP-binding_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AMP-dep_Synth/Lig UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AMP-dep_Synthh-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PP-bd_ACP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PQQ_beta_propeller_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PQQ_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Quinoprotein_ADH-like_supfam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:132949 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 132949 ENTREZGENE
OMIM 614365 OMIM
PANTHER BETA-ALANINE-ACTIVATING ENZYME UniProtKB/Swiss-Prot
  BETA-ALANINE-ACTIVATING ENZYME UniProtKB/Swiss-Prot
  BETA-ALANINE-ACTIVATING ENZYME UniProtKB/TrEMBL
  BETA-ALANINE-ACTIVATING ENZYME UniProtKB/TrEMBL
Pfam AMP-binding UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PP-binding UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PQQ_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PQQ_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA162375178 PharmGKB
PROSITE AMP_BINDING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CARRIER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART PQQ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Acetyl-CoA synthetase-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF47336 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF50998 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A5D8V3 ENTREZGENE
  A5PL22 ENTREZGENE
  ACSF4_HUMAN UniProtKB/Swiss-Prot
  B4DFZ3 ENTREZGENE, UniProtKB/TrEMBL
  B4E195 ENTREZGENE, UniProtKB/TrEMBL
  B4E2K0 ENTREZGENE, UniProtKB/TrEMBL
  B7ZAI1_HUMAN UniProtKB/TrEMBL
  D6RJA2_HUMAN UniProtKB/TrEMBL
  E9PH98_HUMAN UniProtKB/TrEMBL
  Q4L235 ENTREZGENE
  Q63HK2 ENTREZGENE
  Q63HR7 ENTREZGENE
  Q6IPP8 ENTREZGENE
  Q6TFZ6 ENTREZGENE
  Q7Z5Y3 ENTREZGENE
  Q96BW4 ENTREZGENE
  Q9P064 ENTREZGENE
  R4GNB1 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A5D8V3 UniProtKB/Swiss-Prot
  A5PL22 UniProtKB/Swiss-Prot
  Q63HK2 UniProtKB/Swiss-Prot
  Q63HR7 UniProtKB/Swiss-Prot
  Q6IPP8 UniProtKB/Swiss-Prot
  Q6TFZ6 UniProtKB/Swiss-Prot
  Q7Z5Y3 UniProtKB/Swiss-Prot
  Q96BW4 UniProtKB/Swiss-Prot
  Q9P064 UniProtKB/Swiss-Prot