AASDH (aminoadipate-semialdehyde dehydrogenase) - Rat Genome Database

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Gene: AASDH (aminoadipate-semialdehyde dehydrogenase) Pan paniscus
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Symbol: AASDH
Name: aminoadipate-semialdehyde dehydrogenase
RGD ID: 11900479
Description: INVOLVED IN amino acid activation for nonribosomal peptide biosynthetic process (ortholog); beta-alanine metabolic process (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIk (ortholog); genetic disease (ortholog); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: beta-alanine-activating enzyme
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2373,391,262 - 73,447,335 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1473,596,720 - 73,662,401 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0467,536,000 - 67,591,204 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1474,107,854 - 74,159,927 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl474,110,736 - 74,159,809 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
AASDH
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2373,391,262 - 73,447,335 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1473,596,720 - 73,662,401 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0467,536,000 - 67,591,204 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1474,107,854 - 74,159,927 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl474,110,736 - 74,159,809 (+)Ensemblpanpan1.1panPan2
AASDH
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38456,338,290 - 56,387,491 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl456,338,287 - 56,387,508 (-)EnsemblGRCh38hg38GRCh38
GRCh37457,204,456 - 57,253,657 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36456,899,213 - 56,948,395 (-)NCBINCBI36Build 36hg18NCBI36
Celera454,710,829 - 54,760,021 (-)NCBICelera
Cytogenetic Map4q12NCBI
HuRef453,158,378 - 53,207,773 (-)NCBIHuRef
CHM1_1457,239,570 - 57,288,751 (-)NCBICHM1_1
T2T-CHM13v2.0459,826,269 - 59,875,493 (-)NCBIT2T-CHM13v2.0
Aasdh
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39577,021,506 - 77,053,376 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl577,021,506 - 77,053,361 (-)EnsemblGRCm39 Ensembl
GRCm38576,873,659 - 76,905,529 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl576,873,659 - 76,905,514 (-)EnsemblGRCm38mm10GRCm38
MGSCv37577,304,960 - 77,334,539 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36577,950,713 - 77,993,728 (-)NCBIMGSCv36mm8
Celera574,152,121 - 74,182,004 (-)NCBICelera
Cytogenetic Map5C3.3NCBI
cM Map541.45NCBI
Aasdh
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81431,609,488 - 31,636,066 (+)NCBIGRCr8
mRatBN7.21431,255,019 - 31,281,802 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1431,255,310 - 31,281,796 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1431,632,462 - 31,659,180 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01432,940,802 - 32,967,520 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01431,425,469 - 31,452,187 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01433,619,990 - 33,647,268 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1433,624,390 - 33,647,180 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01433,410,917 - 33,438,181 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41433,553,214 - 33,575,421 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11433,553,200 - 33,575,421 (+)NCBI
Celera1430,569,108 - 30,595,707 (+)NCBICelera
Cytogenetic Map14p11NCBI
Aasdh
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544714,622,728 - 14,648,005 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544714,623,532 - 14,648,121 (+)NCBIChiLan1.0ChiLan1.0
AASDH
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11348,574,839 - 48,611,770 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1348,572,220 - 48,611,775 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1348,465,553 - 48,502,540 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01349,189,413 - 49,226,415 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1349,186,794 - 49,226,403 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11348,861,363 - 48,898,350 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01348,390,337 - 48,427,317 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01349,336,285 - 49,373,201 (-)NCBIUU_Cfam_GSD_1.0
Aasdh
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528527,707,855 - 27,739,043 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648218,558,943 - 18,590,297 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648218,558,789 - 18,591,709 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AASDH
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl855,604,626 - 55,645,473 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1855,604,394 - 55,645,536 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2857,986,062 - 57,998,070 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AASDH
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1712,248,193 - 12,292,027 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl712,249,208 - 12,296,516 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606612,918,085 - 12,962,654 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aasdh
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476113,026,213 - 13,064,708 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476113,026,875 - 13,063,511 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008954383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034958770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034958771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034958772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034958773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034958774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034958775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034958776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034958777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034958778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034958779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034958780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034958781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055111522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055111523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055111524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055111525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055111526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_057302098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063603811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063603813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063603814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSPPAT00000039245   ⟹   ENSPPAP00000016548
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl474,110,736 - 74,159,809 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000039249   ⟹   ENSPPAP00000016552
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl474,110,736 - 74,159,505 (+)Ensembl
RefSeq Acc Id: XM_008954383   ⟹   XP_008952631
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2373,391,262 - 73,447,335 (+)NCBI
NHGRI_mPanPan1473,601,399 - 73,662,401 (+)NCBI
Mhudiblu_PPA_v0467,536,002 - 67,591,198 (+)NCBI
PanPan1.1474,107,854 - 74,159,927 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034958771   ⟹   XP_034814662
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2373,391,262 - 73,447,335 (+)NCBI
NHGRI_mPanPan1473,601,399 - 73,662,401 (+)NCBI
Mhudiblu_PPA_v0467,536,000 - 67,591,107 (+)NCBI
RefSeq Acc Id: XM_055111522   ⟹   XP_054967497
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2373,391,262 - 73,447,335 (+)NCBI
NHGRI_mPanPan1473,601,399 - 73,662,401 (+)NCBI
RefSeq Acc Id: XM_055111523   ⟹   XP_054967498
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2373,391,262 - 73,447,335 (+)NCBI
NHGRI_mPanPan1473,596,736 - 73,662,401 (+)NCBI
RefSeq Acc Id: XM_055111524   ⟹   XP_054967499
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2373,398,886 - 73,447,335 (+)NCBI
NHGRI_mPanPan1473,604,405 - 73,662,401 (+)NCBI
RefSeq Acc Id: XM_055111525   ⟹   XP_054967500
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2373,391,262 - 73,447,335 (+)NCBI
NHGRI_mPanPan1473,596,720 - 73,652,929 (+)NCBI
RefSeq Acc Id: XM_055111526   ⟹   XP_054967501
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2373,430,345 - 73,447,335 (+)NCBI
NHGRI_mPanPan1473,635,838 - 73,662,401 (+)NCBI
RefSeq Acc Id: XM_057302098   ⟹   XP_057158081
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2373,391,262 - 73,447,335 (+)NCBI
NHGRI_mPanPan1473,601,399 - 73,652,935 (+)NCBI
RefSeq Acc Id: XM_063603811   ⟹   XP_063459881
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2373,391,262 - 73,447,335 (+)NCBI
RefSeq Acc Id: XM_063603813   ⟹   XP_063459883
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2373,391,262 - 73,447,335 (+)NCBI
RefSeq Acc Id: XM_063603814   ⟹   XP_063459884
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2373,391,262 - 73,447,335 (+)NCBI
RefSeq Acc Id: XP_008952631   ⟸   XM_008954383
- Peptide Label: isoform X2
- UniProtKB: A0A2R9AHQ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034814662   ⟸   XM_034958771
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AHQ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000016552   ⟸   ENSPPAT00000039249
RefSeq Acc Id: ENSPPAP00000016548   ⟸   ENSPPAT00000039245
RefSeq Acc Id: XP_054967500   ⟸   XM_055111525
- Peptide Label: isoform X6
RefSeq Acc Id: XP_054967498   ⟸   XM_055111523
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054967497   ⟸   XM_055111522
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054967499   ⟸   XM_055111524
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054967501   ⟸   XM_055111526
- Peptide Label: isoform X7
RefSeq Acc Id: XP_057158081   ⟸   XM_057302098
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063459881   ⟸   XM_063603811
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063459883   ⟸   XM_063603813
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063459884   ⟸   XM_063603814
- Peptide Label: isoform X4
Protein Domains
Carrier


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000031321 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000039245.1 UniProtKB/TrEMBL
  ENSPPAT00000039249.1 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/TrEMBL
  3.30.300.30 UniProtKB/TrEMBL
  3.40.50.12780 UniProtKB/TrEMBL
InterPro AASDH_AMP UniProtKB/TrEMBL
  ACP-like_sf UniProtKB/TrEMBL
  AMP-bd_C_sf UniProtKB/TrEMBL
  AMP-binding_CS UniProtKB/TrEMBL
  AMP-dep_Synth/Lig UniProtKB/TrEMBL
  ANL_N_sf UniProtKB/TrEMBL
  PP-bd_ACP UniProtKB/TrEMBL
  PQQ_beta_propeller_repeat UniProtKB/TrEMBL
  PQQ_repeat UniProtKB/TrEMBL
  Quinoprotein_ADH-like_supfam UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/TrEMBL
NCBI Gene AASDH ENTREZGENE
PANTHER BETA-ALANINE-ACTIVATING ENZYME UniProtKB/TrEMBL
  BETA-ALANINE-ACTIVATING ENZYME UniProtKB/TrEMBL
Pfam AMP-binding UniProtKB/TrEMBL
  PP-binding UniProtKB/TrEMBL
  PQQ_2 UniProtKB/TrEMBL
  PQQ_3 UniProtKB/TrEMBL
PROSITE AMP_BINDING UniProtKB/TrEMBL
  CARRIER UniProtKB/TrEMBL
SMART PQQ UniProtKB/TrEMBL
Superfamily-SCOP Acetyl-CoA synthetase-like UniProtKB/TrEMBL
  SSF47336 UniProtKB/TrEMBL
  SSF50998 UniProtKB/TrEMBL
UniProt A0A2R9AGS9_PANPA UniProtKB/TrEMBL
  A0A2R9AHQ5 ENTREZGENE, UniProtKB/TrEMBL