TTI2 (TELO2 interacting protein 2) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: TTI2 (TELO2 interacting protein 2) Homo sapiens
Analyze
Symbol: TTI2
Name: TELO2 interacting protein 2
RGD ID: 1604785
HGNC Page HGNC:26262
Description: Located in TTT Hsp90 cochaperone complex. Implicated in autosomal recessive intellectual developmental disorder 39.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: C8orf41; FLJ23263; hypothetical protein LOC80185; MRT39; Tel2 interacting protein 2 homolog; TELO2-interacting protein 2; uncharacterized protein C8orf41
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38833,498,722 - 33,513,135 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl833,473,386 - 33,513,185 (-)EnsemblGRCh38hg38GRCh38
GRCh37833,356,240 - 33,370,653 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36833,475,775 - 33,490,245 (-)NCBINCBI36Build 36hg18NCBI36
Celera832,305,939 - 32,320,408 (-)NCBICelera
Cytogenetic Map8p12NCBI
HuRef831,888,081 - 31,902,749 (-)NCBIHuRef
CHM1_1833,557,468 - 33,572,158 (-)NCBICHM1_1
T2T-CHM13v2.0833,770,062 - 33,784,485 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
Additional References at PubMed
PMID:12477932   PMID:14702039   PMID:15489334   PMID:16344560   PMID:17643375   PMID:19322201   PMID:20801936   PMID:20810650   PMID:21873635   PMID:23956138   PMID:23956177   PMID:25192599  
PMID:26186194   PMID:26496610   PMID:28514442   PMID:28561026   PMID:28700943   PMID:29117863   PMID:29676528   PMID:30033366   PMID:30686591   PMID:30833792   PMID:31073040   PMID:31091453  
PMID:33001583   PMID:33961781   PMID:34373451   PMID:34838521   PMID:35256949   PMID:36215168  


Genomics

Comparative Map Data
TTI2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38833,498,722 - 33,513,135 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl833,473,386 - 33,513,185 (-)EnsemblGRCh38hg38GRCh38
GRCh37833,356,240 - 33,370,653 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36833,475,775 - 33,490,245 (-)NCBINCBI36Build 36hg18NCBI36
Celera832,305,939 - 32,320,408 (-)NCBICelera
Cytogenetic Map8p12NCBI
HuRef831,888,081 - 31,902,749 (-)NCBIHuRef
CHM1_1833,557,468 - 33,572,158 (-)NCBICHM1_1
T2T-CHM13v2.0833,770,062 - 33,784,485 (-)NCBIT2T-CHM13v2.0
Tti2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39831,640,344 - 31,654,731 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl831,640,343 - 31,654,730 (+)EnsemblGRCm39 Ensembl
GRCm38831,150,316 - 31,164,703 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl831,150,315 - 31,164,702 (+)EnsemblGRCm38mm10GRCm38
MGSCv37832,260,788 - 32,275,175 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36832,612,938 - 32,626,989 (+)NCBIMGSCv36mm8
Celera832,675,816 - 32,689,769 (+)NCBICelera
Cytogenetic Map8A3NCBI
cM Map818.03NCBI
Tti2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81667,683,721 - 67,692,881 (-)NCBIGRCr8
mRatBN7.21660,980,665 - 60,988,587 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1660,979,039 - 60,988,569 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1666,296,140 - 66,304,013 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01669,710,646 - 69,718,519 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01664,937,114 - 64,944,940 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01664,737,342 - 64,745,207 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1664,737,340 - 64,745,207 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01664,394,792 - 64,402,657 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41664,888,131 - 64,895,996 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11664,888,205 - 64,896,071 (-)NCBI
Celera1658,985,407 - 58,993,272 (-)NCBICelera
Cytogenetic Map16q12.3NCBI
Tti2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554639,652,321 - 9,660,739 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554639,652,226 - 9,660,712 (-)NCBIChiLan1.0ChiLan1.0
TTI2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2752,073,956 - 52,088,135 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1827,789,252 - 27,803,786 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0832,813,830 - 32,828,134 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1830,000,487 - 30,014,742 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl830,000,487 - 30,014,742 (-)Ensemblpanpan1.1panPan2
TTI2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11631,160,666 - 31,169,576 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1631,160,894 - 31,167,749 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1631,685,785 - 31,692,922 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01633,188,068 - 33,196,955 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1633,188,385 - 33,202,688 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11631,284,224 - 31,293,118 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01631,863,304 - 31,870,474 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01631,902,111 - 31,911,013 (+)NCBIUU_Cfam_GSD_1.0
Tti2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494354,156,205 - 54,165,580 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936766415,884 - 429,928 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936766416,372 - 425,844 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TTI2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.21559,534,435 - 59,547,568 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TTI2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1831,584,395 - 31,598,311 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl831,575,943 - 31,598,387 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605210,454,049 - 10,471,671 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tti2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478010,429,942 - 10,438,635 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478010,429,783 - 10,441,051 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in TTI2
74 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_001102401.4(TTI2):c.1350dup (p.Lys451Ter) duplication Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV001420618]|not provided [RCV000727998] Chr8:33500399..33500400 [GRCh38]
Chr8:33357917..33357918 [GRCh37]
Chr8:8p12
likely pathogenic|uncertain significance
NM_001102401.4(TTI2):c.1100C>T (p.Pro367Leu) single nucleotide variant Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV000074456] Chr8:33503763 [GRCh38]
Chr8:33361281 [GRCh37]
Chr8:8p12
pathogenic
NM_001102401.4(TTI2):c.1307T>A (p.Ile436Asn) single nucleotide variant Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV000074457] Chr8:33500443 [GRCh38]
Chr8:33357961 [GRCh37]
Chr8:8p12
pathogenic
GRCh38/hg38 8p23.1-11.21(chr8:12609975-42085703)x3 copy number gain See cases [RCV000050294] Chr8:12609975..42085703 [GRCh38]
Chr8:12467484..41943221 [GRCh37]
Chr8:12511855..42062378 [NCBI36]
Chr8:8p23.1-11.21
pathogenic
GRCh38/hg38 8p21.2-q11.21(chr8:25832130-48521849)x3 copy number gain See cases [RCV000050904] Chr8:25832130..48521849 [GRCh38]
Chr8:25689646..49434409 [GRCh37]
Chr8:25745563..49596962 [NCBI36]
Chr8:8p21.2-q11.21
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12728904-43673207)x3 copy number gain See cases [RCV000050912] Chr8:12728904..43673207 [GRCh38]
Chr8:12586413..43528350 [GRCh37]
Chr8:12630784..43647507 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-12(chr8:12383584-36370018)x3 copy number gain See cases [RCV000051145] Chr8:12383584..36370018 [GRCh38]
Chr8:12241093..36227536 [GRCh37]
Chr8:12285464..36347088 [NCBI36]
Chr8:8p23.1-12
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145049449)x3 copy number gain See cases [RCV000051206] Chr8:241530..145049449 [GRCh38]
Chr8:191530..146274835 [GRCh37]
Chr8:181530..146245639 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.1-11.21(chr8:12728904-41928741)x3 copy number gain See cases [RCV000051110] Chr8:12728904..41928741 [GRCh38]
Chr8:12586413..41786259 [GRCh37]
Chr8:12630784..41905416 [NCBI36]
Chr8:8p23.1-11.21
pathogenic
GRCh38/hg38 8p12-q11.21(chr8:29719897-48521849)x3 copy number gain See cases [RCV000050995] Chr8:29719897..48521849 [GRCh38]
Chr8:29577413..49434409 [GRCh37]
Chr8:29633332..49596962 [NCBI36]
Chr8:8p12-q11.21
pathogenic
GRCh38/hg38 8p23.1-11.23(chr8:12609975-37892000)x3 copy number gain See cases [RCV000053629] Chr8:12609975..37892000 [GRCh38]
Chr8:12467484..37749518 [GRCh37]
Chr8:12511855..37868676 [NCBI36]
Chr8:8p23.1-11.23
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12609975-43336172)x3 copy number gain See cases [RCV000053630] Chr8:12609975..43336172 [GRCh38]
Chr8:12467484..43191315 [GRCh37]
Chr8:12511855..43310472 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12609975-43255410)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053631]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053631]|See cases [RCV000053631] Chr8:12609975..43255410 [GRCh38]
Chr8:12467484..43110553 [GRCh37]
Chr8:12511855..43229710 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12750796-43532444)x3 copy number gain See cases [RCV000053632] Chr8:12750796..43532444 [GRCh38]
Chr8:12608305..43387587 [GRCh37]
Chr8:12652676..43506744 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p22-q11.21(chr8:14940110-47929925)x3 copy number gain See cases [RCV000053635] Chr8:14940110..47929925 [GRCh38]
Chr8:14797619..48842485 [GRCh37]
Chr8:14841990..49005038 [NCBI36]
Chr8:8p22-q11.21
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3 copy number gain See cases [RCV000053602] Chr8:241530..145054634 [GRCh38]
Chr8:191530..146280020 [GRCh37]
Chr8:181530..146250824 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:244417-145054775)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]|See cases [RCV000053604] Chr8:244417..145054775 [GRCh38]
Chr8:194417..146280161 [GRCh37]
Chr8:184417..146250965 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
NM_001102401.4(TTI2):c.539T>C (p.Leu180Pro) single nucleotide variant Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV003236617] Chr8:33512075 [GRCh38]
Chr8:33369593 [GRCh37]
Chr8:8p12
pathogenic
GRCh37/hg19 8p23.3-11.1(chr8:176814-43396776) copy number gain Abnormal fetal cardiovascular morphology [RCV001291977] Chr8:176814..43396776 [GRCh37]
Chr8:8p23.3-11.1
pathogenic
NM_001102401.4(TTI2):c.127_131delinsAA (p.Arg43_Arg44delinsLys) indel Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV001333762] Chr8:33512483..33512487 [GRCh38]
Chr8:33370001..33370005 [GRCh37]
Chr8:8p12
uncertain significance
GRCh38/hg38 8p23.1-11.1(chr8:12609975-43673207)x3 copy number gain See cases [RCV000135786] Chr8:12609975..43673207 [GRCh38]
Chr8:12467484..43528350 [GRCh37]
Chr8:12511855..43647507 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12383584-43673207)x3 copy number gain See cases [RCV000135566] Chr8:12383584..43673207 [GRCh38]
Chr8:12241093..43528350 [GRCh37]
Chr8:12285464..43647507 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-11.21(chr8:12728904-40169194)x3 copy number gain See cases [RCV000136516] Chr8:12728904..40169194 [GRCh38]
Chr8:12586413..40026713 [GRCh37]
Chr8:12630784..40145870 [NCBI36]
Chr8:8p23.1-11.21
pathogenic
GRCh38/hg38 8p12-11.21(chr8:29362097-40231708)x1 copy number loss See cases [RCV000136878] Chr8:29362097..40231708 [GRCh38]
Chr8:29219614..40089227 [GRCh37]
Chr8:29275533..40208384 [NCBI36]
Chr8:8p12-11.21
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12182421-43673207)x3 copy number gain See cases [RCV000137249] Chr8:12182421..43673207 [GRCh38]
Chr8:12039930..43528350 [GRCh37]
Chr8:12077339..43647507 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-12(chr8:12698495-35476082)x3 copy number gain See cases [RCV000138058] Chr8:12698495..35476082 [GRCh38]
Chr8:12556004..35333600 [GRCh37]
Chr8:12600375..35453142 [NCBI36]
Chr8:8p23.1-12
pathogenic
GRCh38/hg38 8p23.3-11.23(chr8:226452-38021728)x3 copy number gain See cases [RCV000137807] Chr8:226452..38021728 [GRCh38]
Chr8:176452..37879246 [GRCh37]
Chr8:166452..37998403 [NCBI36]
Chr8:8p23.3-11.23
pathogenic|likely pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241605-145054781)x3 copy number gain See cases [RCV000138643] Chr8:241605..145054781 [GRCh38]
Chr8:191605..146280167 [GRCh37]
Chr8:181605..146250971 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p12(chr8:30368765-36421541)x3 copy number gain See cases [RCV000139926] Chr8:30368765..36421541 [GRCh38]
Chr8:30226281..36279059 [GRCh37]
Chr8:30345823..36398222 [NCBI36]
Chr8:8p12
uncertain significance
GRCh38/hg38 8p23.1-11.22(chr8:7141697-38695546)x3 copy number gain See cases [RCV000139891] Chr8:7141697..38695546 [GRCh38]
Chr8:6999219..38553064 [GRCh37]
Chr8:6986629..38672221 [NCBI36]
Chr8:8p23.1-11.22
pathogenic
GRCh38/hg38 8p23.1-11.22(chr8:12729023-39235934)x3 copy number gain See cases [RCV000139770] Chr8:12729023..39235934 [GRCh38]
Chr8:12586532..39093453 [GRCh37]
Chr8:12630903..39212610 [NCBI36]
Chr8:8p23.1-11.22
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12646123-43686843)x3 copy number gain See cases [RCV000139796] Chr8:12646123..43686843 [GRCh38]
Chr8:12503632..43541986 [GRCh37]
Chr8:12548003..43661143 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-11.23(chr8:11851113-37216333)x3 copy number gain See cases [RCV000139549] Chr8:11851113..37216333 [GRCh38]
Chr8:11708622..37073851 [GRCh37]
Chr8:11746031..37193009 [NCBI36]
Chr8:8p23.1-11.23
pathogenic
GRCh38/hg38 8p23.3-12(chr8:226452-34491890)x3 copy number gain See cases [RCV000141410] Chr8:226452..34491890 [GRCh38]
Chr8:176452..34349408 [GRCh37]
Chr8:166452..34468950 [NCBI36]
Chr8:8p23.3-12
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:208048-145070385)x3 copy number gain See cases [RCV000141808] Chr8:208048..145070385 [GRCh38]
Chr8:158048..146295771 [GRCh37]
Chr8:148048..146266575 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p21.3-q24.3(chr8:21291522-145070385)x3 copy number gain See cases [RCV000142021] Chr8:21291522..145070385 [GRCh38]
Chr8:21149033..146295771 [GRCh37]
Chr8:21193313..146266575 [NCBI36]
Chr8:8p21.3-q24.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:226452-145068712)x3 copy number gain See cases [RCV000142858] Chr8:226452..145068712 [GRCh38]
Chr8:176452..146294098 [GRCh37]
Chr8:166452..146264902 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p22-12(chr8:18972996-33619264)x1 copy number loss See cases [RCV000142747] Chr8:18972996..33619264 [GRCh38]
Chr8:18830506..33476782 [GRCh37]
Chr8:18874786..33596324 [NCBI36]
Chr8:8p22-12
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3 copy number gain See cases [RCV000148092] Chr8:241530..145054634 [GRCh38]
Chr8:191530..146280020 [GRCh37]
Chr8:181530..146250824 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.1-11.21(chr8:12633490-40685533)x3 copy number gain See cases [RCV000143508] Chr8:12633490..40685533 [GRCh38]
Chr8:12490999..40543052 [GRCh37]
Chr8:12535370..40662209 [NCBI36]
Chr8:8p23.1-11.21
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12728904-43673207)x3 copy number gain See cases [RCV000148237] Chr8:12728904..43673207 [GRCh38]
Chr8:12586413..43528350 [GRCh37]
Chr8:12630784..43647507 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-11.21(chr8:12609975-42085703)x3 copy number gain See cases [RCV000148249] Chr8:12609975..42085703 [GRCh38]
Chr8:12467484..41943221 [GRCh37]
Chr8:12511855..42062378 [NCBI36]
Chr8:8p23.1-11.21
pathogenic
GRCh37/hg19 8p23.1-11.22(chr8:12528482-39593802)x3 copy number gain See cases [RCV000511325] Chr8:12528482..39593802 [GRCh37]
Chr8:8p23.1-11.22
pathogenic
Single allele duplication not provided [RCV000768452] Chr8:12546855..35816855 [GRCh37]
Chr8:8p23.1-12
likely pathogenic
GRCh37/hg19 8p21.2-q12.1(chr8:24772064-24813176)x3 copy number gain See cases [RCV000446588] Chr8:24772064..24813176 [GRCh37]
Chr8:8p21.2-q12.1
uncertain significance
GRCh37/hg19 8p23.3-q24.3(chr8:158991-146280828)x3 copy number gain See cases [RCV000447507] Chr8:158991..146280828 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p23.3-11.1(chr8:158048-43786723)x3 copy number gain See cases [RCV000447909] Chr8:158048..43786723 [GRCh37]
Chr8:8p23.3-11.1
pathogenic
GRCh37/hg19 8p23.1-11.1(chr8:12580132-43388233)x3 copy number gain See cases [RCV000447913] Chr8:12580132..43388233 [GRCh37]
Chr8:8p23.1-11.1
pathogenic
GRCh37/hg19 8p21.2-12(chr8:24514488-34808438) copy number gain See cases [RCV000448582] Chr8:24514488..34808438 [GRCh37]
Chr8:8p21.2-12
pathogenic
NM_001102401.4(TTI2):c.118C>T (p.Pro40Ser) single nucleotide variant not provided [RCV000971284]|not specified [RCV000503368] Chr8:33512496 [GRCh38]
Chr8:33370014 [GRCh37]
Chr8:8p12
benign|likely benign
NM_001102401.4(TTI2):c.934C>T (p.Leu312Phe) single nucleotide variant not specified [RCV000503886] Chr8:33503929 [GRCh38]
Chr8:33361447 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.168T>C (p.Gly56=) single nucleotide variant not specified [RCV000501752] Chr8:33512446 [GRCh38]
Chr8:33369964 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.1115+7C>G single nucleotide variant TTI2-related condition [RCV003962402]|not provided [RCV000913237]|not specified [RCV000501792] Chr8:33503741 [GRCh38]
Chr8:33361259 [GRCh37]
Chr8:8p12
benign|likely benign|uncertain significance
NM_001102401.4(TTI2):c.1063C>T (p.Arg355Cys) single nucleotide variant not provided [RCV000966369]|not specified [RCV000501889] Chr8:33503800 [GRCh38]
Chr8:33361318 [GRCh37]
Chr8:8p12
likely benign|uncertain significance
NM_001102401.4(TTI2):c.98T>G (p.Ile33Ser) single nucleotide variant not specified [RCV000499674] Chr8:33512516 [GRCh38]
Chr8:33370034 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.695C>T (p.Thr232Ile) single nucleotide variant Inborn genetic diseases [RCV003159634]|Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV001334771]|not specified [RCV000499624] Chr8:33509885 [GRCh38]
Chr8:33367403 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.1274T>G (p.Leu425Arg) single nucleotide variant not provided [RCV000904997]|not specified [RCV000499756] Chr8:33500476 [GRCh38]
Chr8:33357994 [GRCh37]
Chr8:8p12
likely benign|uncertain significance
GRCh37/hg19 8p23.3-q24.3(chr8:158049-146295771) copy number gain See cases [RCV000510234] Chr8:158049..146295771 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p23.1-12(chr8:12528482-33684786)x3 copy number gain See cases [RCV000510571] Chr8:12528482..33684786 [GRCh37]
Chr8:8p23.1-12
pathogenic
NM_001102401.4(TTI2):c.980A>G (p.His327Arg) single nucleotide variant not specified [RCV000502679] Chr8:33503883 [GRCh38]
Chr8:33361401 [GRCh37]
Chr8:8p12
uncertain significance
GRCh37/hg19 8p23.1-11.1(chr8:11935023-43824035)x3 copy number gain See cases [RCV000511028] Chr8:11935023..43824035 [GRCh37]
Chr8:8p23.1-11.1
pathogenic
GRCh37/hg19 8p23.1-12(chr8:11945855-34875355)x3 copy number gain See cases [RCV000510899] Chr8:11945855..34875355 [GRCh37]
Chr8:8p23.1-12
pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158049-146295771)x3 copy number gain See cases [RCV000511095] Chr8:158049..146295771 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
NM_001102401.4(TTI2):c.834+11T>G single nucleotide variant not provided [RCV000513992] Chr8:33509735 [GRCh38]
Chr8:33367253 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.914A>G (p.His305Arg) single nucleotide variant Inborn genetic diseases [RCV003287813] Chr8:33507242 [GRCh38]
Chr8:33364760 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.581G>C (p.Gly194Ala) single nucleotide variant not provided [RCV000514623] Chr8:33512033 [GRCh38]
Chr8:33369551 [GRCh37]
Chr8:8p12
benign|likely benign
GRCh37/hg19 8p23.1-q24.3(chr8:12490999-146295771)x3 copy number gain See cases [RCV000512169] Chr8:12490999..146295771 [GRCh37]
Chr8:8p23.1-q24.3
pathogenic
GRCh37/hg19 8p12-11.21(chr8:31352498-41481295)x3 copy number gain not provided [RCV000683035] Chr8:31352498..41481295 [GRCh37]
Chr8:8p12-11.21
pathogenic
GRCh37/hg19 8p23.1-12(chr8:12552775-35935825)x3 copy number gain not provided [RCV000683043] Chr8:12552775..35935825 [GRCh37]
Chr8:8p23.1-12
pathogenic
GRCh37/hg19 8p12(chr8:30335124-33770070)x1 copy number loss not provided [RCV000683024] Chr8:30335124..33770070 [GRCh37]
Chr8:8p12
pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:164984-146293414)x3 copy number gain not provided [RCV000747254] Chr8:164984..146293414 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:10213-146293414)x3 copy number gain not provided [RCV000747248] Chr8:10213..146293414 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
NM_001102401.4(TTI2):c.258A>G (p.Ala86=) single nucleotide variant not provided [RCV000914366] Chr8:33512356 [GRCh38]
Chr8:33369874 [GRCh37]
Chr8:8p12
likely benign
GRCh37/hg19 8p23.1-12(chr8:12556004-34374150)x3 copy number gain not provided [RCV000762735] Chr8:12556004..34374150 [GRCh37]
Chr8:8p23.1-12
likely pathogenic
NM_001102401.4(TTI2):c.310G>A (p.Asp104Asn) single nucleotide variant not provided [RCV000928555] Chr8:33512304 [GRCh38]
Chr8:33369822 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.414A>C (p.Ala138=) single nucleotide variant not provided [RCV000900832] Chr8:33512200 [GRCh38]
Chr8:33369718 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.137A>G (p.Asn46Ser) single nucleotide variant not provided [RCV000971898] Chr8:33512477 [GRCh38]
Chr8:33369995 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.1068T>C (p.Leu356=) single nucleotide variant not provided [RCV000899780] Chr8:33503795 [GRCh38]
Chr8:33361313 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.1031G>A (p.Arg344Gln) single nucleotide variant TTI2-related condition [RCV003978159]|not provided [RCV000947103] Chr8:33503832 [GRCh38]
Chr8:33361350 [GRCh37]
Chr8:8p12
benign
NM_001102401.4(TTI2):c.723G>A (p.Leu241=) single nucleotide variant TTI2-related condition [RCV003970671]|not provided [RCV000947104] Chr8:33509857 [GRCh38]
Chr8:33367375 [GRCh37]
Chr8:8p12
benign
NM_001102401.4(TTI2):c.567A>G (p.Ala189=) single nucleotide variant not provided [RCV000881354] Chr8:33512047 [GRCh38]
Chr8:33369565 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.1506C>T (p.Gly502=) single nucleotide variant not provided [RCV000943282]|not specified [RCV001818920] Chr8:33499194 [GRCh38]
Chr8:33356712 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.1086C>T (p.Tyr362=) single nucleotide variant not provided [RCV000929668] Chr8:33503777 [GRCh38]
Chr8:33361295 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.1167T>C (p.Ile389=) single nucleotide variant not provided [RCV000980878] Chr8:33503521 [GRCh38]
Chr8:33361039 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.105C>T (p.His35=) single nucleotide variant not provided [RCV000924988] Chr8:33512509 [GRCh38]
Chr8:33370027 [GRCh37]
Chr8:8p12
likely benign
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771) copy number gain Polydactyly [RCV002280629] Chr8:158048..146295771 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771)x3 copy number gain not provided [RCV000848478] Chr8:158048..146295771 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p12-q24.3(chr8:31936551-146295771)x3 copy number gain not provided [RCV000848192] Chr8:31936551..146295771 [GRCh37]
Chr8:8p12-q24.3
pathogenic
GRCh37/hg19 8p12(chr8:29103983-35728509)x1 copy number loss not provided [RCV000846377] Chr8:29103983..35728509 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.276T>C (p.Tyr92=) single nucleotide variant not provided [RCV000932293] Chr8:33512338 [GRCh38]
Chr8:33369856 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.127C>A (p.Arg43=) single nucleotide variant not provided [RCV000879748] Chr8:33512487 [GRCh38]
Chr8:33370005 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.117C>T (p.Arg39=) single nucleotide variant not provided [RCV000933039] Chr8:33512497 [GRCh38]
Chr8:33370015 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.1260-9T>C single nucleotide variant not provided [RCV000913622] Chr8:33500499 [GRCh38]
Chr8:33358017 [GRCh37]
Chr8:8p12
likely benign
GRCh37/hg19 8p21.2-11.22(chr8:26808969-38346383)x1 copy number loss not provided [RCV002472596] Chr8:26808969..38346383 [GRCh37]
Chr8:8p21.2-11.22
pathogenic
NM_001102401.4(TTI2):c.1414C>T (p.Arg472Trp) single nucleotide variant Microcephaly [RCV001252790] Chr8:33500336 [GRCh38]
Chr8:33357854 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.21_22insAAGCGCTCTG (p.Glu8fs) insertion not provided [RCV001064876] Chr8:33512592..33512593 [GRCh38]
Chr8:33370110..33370111 [GRCh37]
Chr8:8p12
pathogenic|uncertain significance
NM_001102401.4(TTI2):c.1121_1122dup (p.Ile375fs) duplication not provided [RCV001091595] Chr8:33503565..33503566 [GRCh38]
Chr8:33361083..33361084 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.1064G>A (p.Arg355His) single nucleotide variant Inborn genetic diseases [RCV004030278]|Microcephaly [RCV001252791]|Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV001262440] Chr8:33503799 [GRCh38]
Chr8:33361317 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.55G>C (p.Glu19Gln) single nucleotide variant Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV001334770] Chr8:33512559 [GRCh38]
Chr8:33370077 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.638A>G (p.Asp213Gly) single nucleotide variant Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV001330290]|not specified [RCV001820021] Chr8:33511976 [GRCh38]
Chr8:33369494 [GRCh37]
Chr8:8p12
likely benign|uncertain significance
NM_001102401.4(TTI2):c.1001G>A (p.Arg334Gln) single nucleotide variant Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV001330289] Chr8:33503862 [GRCh38]
Chr8:33361380 [GRCh37]
Chr8:8p12
uncertain significance
GRCh37/hg19 8p12(chr8:32691933-33893567)x3 copy number gain not provided [RCV001270668] Chr8:32691933..33893567 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.796C>G (p.Leu266Val) single nucleotide variant not provided [RCV001727442] Chr8:33509784 [GRCh38]
Chr8:33367302 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.1297T>G (p.Leu433Val) single nucleotide variant Inborn genetic diseases [RCV003197447] Chr8:33500453 [GRCh38]
Chr8:33357971 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.1250C>G (p.Thr417Ser) single nucleotide variant not specified [RCV001817532] Chr8:33503438 [GRCh38]
Chr8:33360956 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.489del (p.Pro162_Trp163insTer) deletion not specified [RCV001817766] Chr8:33512125 [GRCh38]
Chr8:33369643 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.1107C>T (p.Phe369=) single nucleotide variant not specified [RCV001820230] Chr8:33503756 [GRCh38]
Chr8:33361274 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.1135C>T (p.Arg379Trp) single nucleotide variant Inborn genetic diseases [RCV004040983]|not specified [RCV001820386] Chr8:33503553 [GRCh38]
Chr8:33361071 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.188A>G (p.Glu63Gly) single nucleotide variant Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV001840961]|TTI2-related condition [RCV003976233] Chr8:33512426 [GRCh38]
Chr8:33369944 [GRCh37]
Chr8:8p12
benign
NM_001102401.4(TTI2):c.-99-31C>T single nucleotide variant Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV001840963] Chr8:33512743 [GRCh38]
Chr8:33370261 [GRCh37]
Chr8:8p12
benign
NM_001102401.4(TTI2):c.138T>C (p.Asn46=) single nucleotide variant Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV001840962]|TTI2-related condition [RCV003976234] Chr8:33512476 [GRCh38]
Chr8:33369994 [GRCh37]
Chr8:8p12
benign
NM_001102401.4(TTI2):c.1397A>C (p.Asp466Ala) single nucleotide variant not specified [RCV002248918] Chr8:33500353 [GRCh38]
Chr8:33357871 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.575T>C (p.Leu192Pro) single nucleotide variant Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV003236618] Chr8:33512039 [GRCh38]
Chr8:33369557 [GRCh37]
Chr8:8p12
pathogenic
NM_001102401.4(TTI2):c.1086C>A (p.Tyr362Ter) single nucleotide variant Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV002272951] Chr8:33503777 [GRCh38]
Chr8:33361295 [GRCh37]
Chr8:8p12
uncertain significance
Single allele complex 8p inverted duplication/deletion syndrome [RCV002280753] Chr8:158048..43019304 [GRCh37]
Chr8:8p23.3-11.21
pathogenic
Single allele complex See cases [RCV002292428] Chr8:6999114..11935023 [GRCh37]
Chr8:8p23.3-11.21
pathogenic
NM_001102401.4(TTI2):c.1075C>T (p.Arg359Cys) single nucleotide variant Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV003236616] Chr8:33503788 [GRCh38]
Chr8:33361306 [GRCh37]
Chr8:8p12
pathogenic
NM_001102401.4(TTI2):c.1259+2dup duplication not provided [RCV002305964] Chr8:33503426..33503427 [GRCh38]
Chr8:33360944..33360945 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.950A>T (p.Asp317Val) single nucleotide variant Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV002463372] Chr8:33503913 [GRCh38]
Chr8:33361431 [GRCh37]
Chr8:8p12
pathogenic|likely pathogenic
NM_001102401.4(TTI2):c.985A>G (p.Lys329Glu) single nucleotide variant Inborn genetic diseases [RCV002753269] Chr8:33503878 [GRCh38]
Chr8:33361396 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.1087G>A (p.Ala363Thr) single nucleotide variant Inborn genetic diseases [RCV002733655] Chr8:33503776 [GRCh38]
Chr8:33361294 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.647+1G>A single nucleotide variant Inborn genetic diseases [RCV002727864] Chr8:33511966 [GRCh38]
Chr8:33369484 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.446C>T (p.Pro149Leu) single nucleotide variant Inborn genetic diseases [RCV002758121] Chr8:33512168 [GRCh38]
Chr8:33369686 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.1357G>A (p.Ala453Thr) single nucleotide variant Inborn genetic diseases [RCV002759784] Chr8:33500393 [GRCh38]
Chr8:33357911 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.713G>A (p.Arg238Gln) single nucleotide variant Inborn genetic diseases [RCV002768668] Chr8:33509867 [GRCh38]
Chr8:33367385 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.119C>T (p.Pro40Leu) single nucleotide variant Inborn genetic diseases [RCV002697467] Chr8:33512495 [GRCh38]
Chr8:33370013 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.1166T>C (p.Ile389Thr) single nucleotide variant Inborn genetic diseases [RCV002986328] Chr8:33503522 [GRCh38]
Chr8:33361040 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.1190G>A (p.Gly397Glu) single nucleotide variant Inborn genetic diseases [RCV002989287] Chr8:33503498 [GRCh38]
Chr8:33361016 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.569G>T (p.Gly190Val) single nucleotide variant Inborn genetic diseases [RCV002831002]|not provided [RCV003443151] Chr8:33512045 [GRCh38]
Chr8:33369563 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.1076G>A (p.Arg359His) single nucleotide variant Inborn genetic diseases [RCV002717427] Chr8:33503787 [GRCh38]
Chr8:33361305 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.764T>C (p.Ile255Thr) single nucleotide variant Inborn genetic diseases [RCV002748135] Chr8:33509816 [GRCh38]
Chr8:33367334 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.758T>C (p.Leu253Ser) single nucleotide variant Inborn genetic diseases [RCV003200530] Chr8:33509822 [GRCh38]
Chr8:33367340 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.160G>T (p.Asp54Tyr) single nucleotide variant Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV003142899] Chr8:33512454 [GRCh38]
Chr8:33369972 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.709A>G (p.Thr237Ala) single nucleotide variant Inborn genetic diseases [RCV003179932]|not provided [RCV003228145] Chr8:33509871 [GRCh38]
Chr8:33367389 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.955T>C (p.Phe319Leu) single nucleotide variant Inborn genetic diseases [RCV003340276] Chr8:33503908 [GRCh38]
Chr8:33361426 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.1423G>A (p.Gly475Ser) single nucleotide variant Inborn genetic diseases [RCV003357578] Chr8:33499277 [GRCh38]
Chr8:33356795 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.215G>T (p.Gly72Val) single nucleotide variant Inborn genetic diseases [RCV003381106] Chr8:33512399 [GRCh38]
Chr8:33369917 [GRCh37]
Chr8:8p12
uncertain significance
Single allele duplication not provided [RCV003448693] Chr8:12530550..43483193 [GRCh37]
Chr8:8p23.1-11.1
pathogenic
GRCh37/hg19 8p23.1-11.23(chr8:11945856-37902453)x3 copy number gain not provided [RCV003484722] Chr8:11945856..37902453 [GRCh37]
Chr8:8p23.1-11.23
pathogenic
GRCh37/hg19 8p23.1-11.22(chr8:12560782-38748763)x3 copy number gain not provided [RCV003484724] Chr8:12560782..38748763 [GRCh37]
Chr8:8p23.1-11.22
pathogenic
GRCh37/hg19 8p22-11.1(chr8:14240573-43824035)x3 copy number gain not provided [RCV003484725] Chr8:14240573..43824035 [GRCh37]
Chr8:8p22-11.1
pathogenic
GRCh37/hg19 8p23.2-11.21(chr8:2201405-41723095)x3 copy number gain not provided [RCV003484713] Chr8:2201405..41723095 [GRCh37]
Chr8:8p23.2-11.21
pathogenic
NM_001102401.4(TTI2):c.1399C>T (p.Arg467Cys) single nucleotide variant not provided [RCV003442681] Chr8:33500351 [GRCh38]
Chr8:33357869 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.750C>T (p.Pro250=) single nucleotide variant TTI2-related condition [RCV003954202]|not provided [RCV003436856] Chr8:33509830 [GRCh38]
Chr8:33367348 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.290A>C (p.Lys97Thr) single nucleotide variant Inborn genetic diseases [RCV004364625]|not provided [RCV003436857] Chr8:33512324 [GRCh38]
Chr8:33369842 [GRCh37]
Chr8:8p12
likely benign|uncertain significance
NM_001102401.4(TTI2):c.326C>T (p.Ala109Val) single nucleotide variant not provided [RCV003441304] Chr8:33512288 [GRCh38]
Chr8:33369806 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.1038C>T (p.Ile346=) single nucleotide variant not provided [RCV003436855] Chr8:33503825 [GRCh38]
Chr8:33361343 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.1117T>C (p.Leu373=) single nucleotide variant not provided [RCV003435457] Chr8:33503571 [GRCh38]
Chr8:33361089 [GRCh37]
Chr8:8p12
likely benign
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771)x3 copy number gain not specified [RCV003986742] Chr8:158048..146295771 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p23.3-11.21(chr8:158048-41600696)x3 copy number gain not specified [RCV003986756] Chr8:158048..41600696 [GRCh37]
Chr8:8p23.3-11.21
pathogenic
GRCh37/hg19 8p21.3-11.1(chr8:20136266-43786723)x3 copy number gain not specified [RCV003986767] Chr8:20136266..43786723 [GRCh37]
Chr8:8p21.3-11.1
pathogenic
GRCh37/hg19 8p21.2-q21.3(chr8:27024288-89410121)x3 copy number gain not specified [RCV003986754] Chr8:27024288..89410121 [GRCh37]
Chr8:8p21.2-q21.3
pathogenic
NM_001102401.4(TTI2):c.356T>C (p.Leu119Pro) single nucleotide variant Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV003991971] Chr8:33512258 [GRCh38]
Chr8:33369776 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.-100+1G>A single nucleotide variant Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV003994751] Chr8:33513081 [GRCh38]
Chr8:33370599 [GRCh37]
Chr8:8p12
benign
NM_001102401.4(TTI2):c.585A>G (p.Glu195=) single nucleotide variant TTI2-related condition [RCV003961973] Chr8:33512029 [GRCh38]
Chr8:33369547 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.796C>T (p.Leu266=) single nucleotide variant TTI2-related condition [RCV003941828] Chr8:33509784 [GRCh38]
Chr8:33367302 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.687C>T (p.Phe229=) single nucleotide variant TTI2-related condition [RCV003943949] Chr8:33509893 [GRCh38]
Chr8:33367411 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.1115+2T>C single nucleotide variant Severe intellectual disability-short stature-behavioral abnormalities-facial dysmorphism syndrome [RCV003990681] Chr8:33503746 [GRCh38]
Chr8:33361264 [GRCh37]
Chr8:8p12
likely pathogenic
NM_001102401.4(TTI2):c.1030C>T (p.Arg344Trp) single nucleotide variant Inborn genetic diseases [RCV004479372] Chr8:33503833 [GRCh38]
Chr8:33361351 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.1426C>G (p.Leu476Val) single nucleotide variant Inborn genetic diseases [RCV004479373] Chr8:33499274 [GRCh38]
Chr8:33356792 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.1439T>G (p.Ile480Ser) single nucleotide variant Inborn genetic diseases [RCV004479374] Chr8:33499261 [GRCh38]
Chr8:33356779 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.1475A>G (p.Tyr492Cys) single nucleotide variant Inborn genetic diseases [RCV004479375] Chr8:33499225 [GRCh38]
Chr8:33356743 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.448G>A (p.Val150Ile) single nucleotide variant Inborn genetic diseases [RCV004479376] Chr8:33512166 [GRCh38]
Chr8:33369684 [GRCh37]
Chr8:8p12
likely benign
NM_001102401.4(TTI2):c.668C>T (p.Pro223Leu) single nucleotide variant Inborn genetic diseases [RCV004479378] Chr8:33509912 [GRCh38]
Chr8:33367430 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.687C>G (p.Phe229Leu) single nucleotide variant Inborn genetic diseases [RCV004479379] Chr8:33509893 [GRCh38]
Chr8:33367411 [GRCh37]
Chr8:8p12
uncertain significance
NM_001102401.4(TTI2):c.908C>G (p.Pro303Arg) single nucleotide variant Inborn genetic diseases [RCV004479380] Chr8:33507248 [GRCh38]
Chr8:33364766 [GRCh37]
Chr8:8p12
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1025
Count of miRNA genes:576
Interacting mature miRNAs:660
Transcripts:ENST00000360742, ENST00000431156, ENST00000519356, ENST00000520636, ENST00000523305
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
SHGC-32777  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37833,356,624 - 33,356,750UniSTSGRCh37
Build 36833,476,166 - 33,476,292RGDNCBI36
Celera832,306,329 - 32,306,455RGD
Cytogenetic Map8p12UniSTS
HuRef831,888,678 - 31,888,804UniSTS
TNG Radiation Hybrid Map1133785.0UniSTS
Stanford-G3 RH Map81490.0UniSTS
GeneMap99-GB4 RH Map8123.58UniSTS
Whitehead-RH Map8127.9UniSTS
NCBI RH Map8462.3UniSTS
GeneMap99-G3 RH Map81580.0UniSTS
G29147  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37833,358,561 - 33,358,694UniSTSGRCh37
Build 36833,478,103 - 33,478,236RGDNCBI36
Celera832,308,266 - 32,308,399RGD
Cytogenetic Map8p12UniSTS
HuRef831,890,615 - 31,890,748UniSTS
27STS02  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37833,355,965 - 33,356,126UniSTSGRCh37
Celera832,305,670 - 32,305,831UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 95 12 28 7 617 7 270 49 110 67 500 178 6 1 1 20
Low 2344 2937 1696 615 1320 456 4087 2120 3591 349 960 1435 168 1203 2768 6 2
Below cutoff 42 2 2 14 2 28 33 3

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_033257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001102401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001265581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001330505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_025115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054361287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC091144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI890434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK026916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK308918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL530920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC007387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC066935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM550924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX648410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CS300619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA617987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB047280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB099592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB112682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB113350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000360742   ⟹   ENSP00000353971
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl833,498,954 - 33,513,109 (-)Ensembl
RefSeq Acc Id: ENST00000431156   ⟹   ENSP00000411169
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl833,498,722 - 33,513,135 (-)Ensembl
RefSeq Acc Id: ENST00000519356
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl833,473,386 - 33,509,785 (-)Ensembl
RefSeq Acc Id: ENST00000520636   ⟹   ENSP00000428401
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl833,499,118 - 33,512,712 (-)Ensembl
RefSeq Acc Id: ENST00000523305   ⟹   ENSP00000428569
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl833,512,311 - 33,513,119 (-)Ensembl
RefSeq Acc Id: ENST00000613904   ⟹   ENSP00000478396
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl833,498,509 - 33,513,185 (-)Ensembl
RefSeq Acc Id: NM_001102401   ⟹   NP_001095871
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38833,498,722 - 33,513,135 (-)NCBI
GRCh37833,356,027 - 33,370,703 (-)NCBI
Build 36833,475,775 - 33,490,245 (-)NCBI Archive
Celera832,305,939 - 32,320,408 (-)RGD
HuRef831,888,081 - 31,902,749 (-)NCBI
CHM1_1833,557,468 - 33,572,158 (-)NCBI
T2T-CHM13v2.0833,770,062 - 33,784,485 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001265581   ⟹   NP_001252510
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38833,498,722 - 33,513,135 (-)NCBI
GRCh37833,356,027 - 33,370,703 (-)NCBI
HuRef831,888,081 - 31,902,749 (-)NCBI
CHM1_1833,557,468 - 33,572,158 (-)NCBI
T2T-CHM13v2.0833,770,062 - 33,784,485 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001330505   ⟹   NP_001317434
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38833,498,722 - 33,513,135 (-)NCBI
T2T-CHM13v2.0833,770,062 - 33,784,485 (-)NCBI
Sequence:
RefSeq Acc Id: NM_025115   ⟹   NP_079391
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38833,498,722 - 33,513,135 (-)NCBI
GRCh37833,356,027 - 33,370,703 (-)NCBI
Build 36833,475,775 - 33,490,198 (-)NCBI Archive
Celera832,305,939 - 32,320,408 (-)RGD
HuRef831,888,081 - 31,902,749 (-)NCBI
CHM1_1833,557,468 - 33,572,158 (-)NCBI
T2T-CHM13v2.0833,770,062 - 33,784,485 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047422266   ⟹   XP_047278222
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38833,498,722 - 33,513,135 (-)NCBI
RefSeq Acc Id: XM_054361287   ⟹   XP_054217262
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0833,770,062 - 33,784,485 (-)NCBI
RefSeq Acc Id: NP_001095871   ⟸   NM_001102401
- Peptide Label: isoform 1
- UniProtKB: Q96IM2 (UniProtKB/Swiss-Prot),   D3DSV7 (UniProtKB/Swiss-Prot),   Q9H5N4 (UniProtKB/Swiss-Prot),   Q6NXR4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_079391   ⟸   NM_025115
- Peptide Label: isoform 1
- UniProtKB: Q96IM2 (UniProtKB/Swiss-Prot),   D3DSV7 (UniProtKB/Swiss-Prot),   Q9H5N4 (UniProtKB/Swiss-Prot),   Q6NXR4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001252510   ⟸   NM_001265581
- Peptide Label: isoform 1
- UniProtKB: Q96IM2 (UniProtKB/Swiss-Prot),   D3DSV7 (UniProtKB/Swiss-Prot),   Q9H5N4 (UniProtKB/Swiss-Prot),   Q6NXR4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001317434   ⟸   NM_001330505
- Peptide Label: isoform 2
- UniProtKB: E5RIH5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000353971   ⟸   ENST00000360742
RefSeq Acc Id: ENSP00000478396   ⟸   ENST00000613904
RefSeq Acc Id: ENSP00000428401   ⟸   ENST00000520636
RefSeq Acc Id: ENSP00000428569   ⟸   ENST00000523305
RefSeq Acc Id: ENSP00000411169   ⟸   ENST00000431156
RefSeq Acc Id: XP_047278222   ⟸   XM_047422266
- Peptide Label: isoform X1
- UniProtKB: E5RIH5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054217262   ⟸   XM_054361287
- Peptide Label: isoform X1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6NXR4-F1-model_v2 AlphaFold Q6NXR4 1-508 view protein structure

Promoters
RGD ID:6806537
Promoter ID:HG_KWN:61090
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562,   Lymphoblastoid
Transcripts:UC010LVU.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36833,477,181 - 33,477,681 (-)MPROMDB
RGD ID:6806536
Promoter ID:HG_KWN:61091
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_001102401,   NM_025115,   UC003XJK.2,   UC003XJN.1,   UC010LVV.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36833,490,351 - 33,490,851 (-)MPROMDB
RGD ID:7213075
Promoter ID:EPDNEW_H12283
Type:initiation region
Name:C8orf41_1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38833,513,109 - 33,513,169EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:26262 AgrOrtholog
COSMIC TTI2 COSMIC
Ensembl Genes ENSG00000129696 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000360742 ENTREZGENE
  ENST00000360742.9 UniProtKB/Swiss-Prot
  ENST00000431156 ENTREZGENE
  ENST00000431156.7 UniProtKB/Swiss-Prot
  ENST00000520636 ENTREZGENE
  ENST00000520636.5 UniProtKB/TrEMBL
  ENST00000523305.1 UniProtKB/TrEMBL
  ENST00000613904 ENTREZGENE
  ENST00000613904.1 UniProtKB/Swiss-Prot
GTEx ENSG00000129696 GTEx
HGNC ID HGNC:26262 ENTREZGENE
Human Proteome Map TTI2 Human Proteome Map
InterPro ARM-type_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tti2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:80185 UniProtKB/Swiss-Prot
NCBI Gene 80185 ENTREZGENE
OMIM 614426 OMIM
PANTHER PTHR32226 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TELO2-INTERACTING PROTEIN 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Tti2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA142672360 PharmGKB
Superfamily-SCOP SSF48371 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3DSV7 ENTREZGENE
  E5RHM7_HUMAN UniProtKB/TrEMBL
  E5RIH5 ENTREZGENE, UniProtKB/TrEMBL
  Q6NXR4 ENTREZGENE
  Q96IM2 ENTREZGENE
  Q9H5N4 ENTREZGENE
  TTI2_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary D3DSV7 UniProtKB/Swiss-Prot
  Q96IM2 UniProtKB/Swiss-Prot
  Q9H5N4 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-11-22 TTI2  TELO2 interacting protein 2  TTI2  Tel2 interacting protein 2 homolog (S. pombe)  Symbol and/or name change 5135510 APPROVED
2011-09-27 TTI2  Tel2 interacting protein 2 homolog (S. pombe)  C8orf41  chromosome 8 open reading frame 41  Symbol and/or name change 5135510 APPROVED