KRBA1 (KRAB-A domain containing 1) - Rat Genome Database

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Gene: KRBA1 (KRAB-A domain containing 1) Homo sapiens
Analyze
Symbol: KRBA1
Name: KRAB-A domain containing 1
RGD ID: 1603293
HGNC Page HGNC:22228
Description: Predicted to be involved in regulation of DNA-templated transcription.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: KIAA1862; KRAB A domain containing 1; MGC176633
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387149,714,951 - 149,734,575 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7149,714,781 - 149,734,575 (+)EnsemblGRCh38hg38GRCh38
GRCh377149,412,042 - 149,431,664 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367149,043,081 - 149,062,597 (+)NCBINCBI36Build 36hg18NCBI36
Celera7144,081,358 - 144,100,876 (+)NCBICelera
Cytogenetic Map7q36.1NCBI
HuRef7143,488,412 - 143,507,802 (+)NCBIHuRef
CHM1_17149,420,733 - 149,440,251 (+)NCBICHM1_1
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27148,750,155 - 148,769,673 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11347906   PMID:12477932   PMID:20368287   PMID:21988832   PMID:26186194   PMID:28514442   PMID:32296183   PMID:32908313   PMID:33961781   PMID:35563538   PMID:36774506  


Genomics

Comparative Map Data
KRBA1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387149,714,951 - 149,734,575 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7149,714,781 - 149,734,575 (+)EnsemblGRCh38hg38GRCh38
GRCh377149,412,042 - 149,431,664 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367149,043,081 - 149,062,597 (+)NCBINCBI36Build 36hg18NCBI36
Celera7144,081,358 - 144,100,876 (+)NCBICelera
Cytogenetic Map7q36.1NCBI
HuRef7143,488,412 - 143,507,802 (+)NCBIHuRef
CHM1_17149,420,733 - 149,440,251 (+)NCBICHM1_1
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27148,750,155 - 148,769,673 (+)NCBI
Krba1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39648,371,577 - 48,396,789 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl648,372,520 - 48,396,715 (+)EnsemblGRCm39 Ensembl
GRCm38648,394,643 - 48,419,855 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl648,395,586 - 48,419,781 (+)EnsemblGRCm38mm10GRCm38
MGSCv37648,345,585 - 48,369,854 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36648,325,252 - 48,346,487 (+)NCBIMGSCv36mm8
Celera648,899,449 - 48,923,738 (+)NCBICelera
Cytogenetic Map6B2.3NCBI
cM Map623.36NCBI
Krba1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8478,672,384 - 78,693,984 (+)NCBIGRCr8
mRatBN7.2477,341,654 - 77,363,075 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl477,340,959 - 77,363,613 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0478,024,867 - 78,046,330 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl478,024,765 - 78,046,066 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04142,688,463 - 142,709,881 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4476,477,912 - 76,499,326 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1476,754,057 - 76,774,989 (+)NCBI
Celera472,279,357 - 72,300,819 (+)NCBICelera
Cytogenetic Map4q24NCBI
Krba1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554914,784,937 - 4,804,051 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554914,784,536 - 4,805,976 (+)NCBIChiLan1.0ChiLan1.0
KRBA1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26186,271,535 - 186,293,461 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1738,281,826 - 38,301,544 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07141,417,879 - 141,439,606 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17153,891,432 - 153,910,989 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7153,891,432 - 153,910,989 (+)Ensemblpanpan1.1panPan2
KRBA1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11614,487,421 - 14,514,016 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1614,487,552 - 14,511,207 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1615,096,286 - 15,122,912 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01616,202,413 - 16,229,046 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1616,202,330 - 16,228,274 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11614,582,526 - 14,609,160 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01615,163,323 - 15,189,959 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01615,213,485 - 15,240,117 (+)NCBIUU_Cfam_GSD_1.0
Krba1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244051187,115,619 - 7,135,007 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365275,767,780 - 5,782,748 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365275,768,251 - 5,783,853 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KRBA1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1855,738,167 - 55,762,966 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11855,738,139 - 55,762,987 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21861,138,184 - 61,150,922 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KRBA1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121118,280,304 - 118,299,922 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl21118,280,320 - 118,299,392 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607214,238,944 - 14,258,610 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Krba1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248006,272,176 - 6,286,460 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248006,266,554 - 6,291,335 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in KRBA1
48 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 7q35-36.1(chr7:147345844-150426340)x1 copy number loss See cases [RCV000050838] Chr7:147345844..150426340 [GRCh38]
Chr7:147042936..150123428 [GRCh37]
Chr7:146673869..149754361 [NCBI36]
Chr7:7q35-36.1		 pathogenic
GRCh38/hg38 7q32.1-36.3(chr7:129310166-159282390)x3 copy number gain See cases [RCV000050876] Chr7:129310166..159282390 [GRCh38]
Chr7:128950007..159075079 [GRCh37]
Chr7:128737243..158767840 [NCBI36]
Chr7:7q32.1-36.3		 pathogenic
GRCh38/hg38 7q35-36.1(chr7:143884559-152674271)x1 copy number loss See cases [RCV000050750] Chr7:143884559..152674271 [GRCh38]
Chr7:143581652..152371356 [GRCh37]
Chr7:143212585..152002289 [NCBI36]
Chr7:7q35-36.1		 pathogenic
GRCh38/hg38 7q32.3-36.3(chr7:132850196-159325876)x3 copy number gain See cases [RCV000051101] Chr7:132850196..159325876 [GRCh38]
Chr7:132534956..159118566 [GRCh37]
Chr7:132185496..158811327 [NCBI36]
Chr7:7q32.3-36.3		 pathogenic
GRCh38/hg38 7q35-36.3(chr7:147250465-159325876)x1 copy number loss See cases [RCV000051108] Chr7:147250465..159325876 [GRCh38]
Chr7:146947557..159118566 [GRCh37]
Chr7:146578490..158811327 [NCBI36]
Chr7:7q35-36.3		 pathogenic
GRCh38/hg38 7p22.3-q36.3(chr7:53985-159282531)x1 copy number loss See cases [RCV000052250] Chr7:53985..159282531 [GRCh38]
Chr7:53985..159075220 [GRCh37]
Chr7:149068..158767981 [NCBI36]
Chr7:7p22.3-q36.3		 pathogenic
GRCh38/hg38 7q33-36.3(chr7:136309982-159307523)x3 copy number gain See cases [RCV000053576] Chr7:136309982..159307523 [GRCh38]
Chr7:135994730..159100212 [GRCh37]
Chr7:135645270..158792973 [NCBI36]
Chr7:7q33-36.3		 pathogenic
GRCh38/hg38 7q34-36.3(chr7:142021716-159325876)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053577]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053577]|See cases [RCV000053577] Chr7:142021716..159325876 [GRCh38]
Chr7:142528609..159118566 [GRCh37]
Chr7:141367985..158811327 [NCBI36]
Chr7:7q34-36.3		 pathogenic
GRCh38/hg38 7q35-36.3(chr7:143884559-159282390)x1 copy number loss See cases [RCV000054178] Chr7:143884559..159282390 [GRCh38]
Chr7:143581652..159075079 [GRCh37]
Chr7:143212585..158767840 [NCBI36]
Chr7:7q35-36.3		 pathogenic
GRCh38/hg38 7q35-36.3(chr7:145699944-159296617)x1 copy number loss See cases [RCV000054188] Chr7:145699944..159296617 [GRCh38]
Chr7:145397037..159089306 [GRCh37]
Chr7:145027970..158782067 [NCBI36]
Chr7:7q35-36.3		 pathogenic
GRCh38/hg38 7q36.1(chr7:148256584-152332535)x1 copy number loss See cases [RCV000054189] Chr7:148256584..152332535 [GRCh38]
Chr7:147953676..152029620 [GRCh37]
Chr7:147584609..151660553 [NCBI36]
Chr7:7q36.1		 pathogenic
GRCh38/hg38 7q34-36.3(chr7:139365967-159282531)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000054175]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000054175]|See cases [RCV000054175] Chr7:139365967..159282531 [GRCh38]
Chr7:139050713..159075220 [GRCh37]
Chr7:138701253..158767981 [NCBI36]
Chr7:7q34-36.3		 pathogenic
GRCh38/hg38 7q34-36.3(chr7:140754198-159307523)x1 copy number loss See cases [RCV000054176] Chr7:140754198..159307523 [GRCh38]
Chr7:140453998..159100212 [GRCh37]
Chr7:140100467..158792973 [NCBI36]
Chr7:7q34-36.3		 pathogenic
GRCh38/hg38 7q34-36.3(chr7:142358524-159282531)x1 copy number loss See cases [RCV000054177] Chr7:142358524..159282531 [GRCh38]
Chr7:142528609..159075220 [GRCh37]
Chr7:141726947..158767981 [NCBI36]
Chr7:7q34-36.3		 pathogenic
NM_032534.3(KRBA1):c.2277C>T (p.Pro759=) single nucleotide variant Malignant melanoma [RCV000067757] Chr7:149733231 [GRCh38]
Chr7:149430320 [GRCh37]
Chr7:149061253 [NCBI36]
Chr7:7q36.1		 not provided
GRCh38/hg38 7q36.1(chr7:149666954-149906059)x3 copy number gain See cases [RCV000134324] Chr7:149666954..149906059 [GRCh38]
Chr7:149364045..149603148 [GRCh37]
Chr7:148994978..149234081 [NCBI36]
Chr7:7q36.1		 benign
GRCh38/hg38 7p22.3-q36.3(chr7:54185-159282390)x1 copy number loss See cases [RCV000135401] Chr7:54185..159282390 [GRCh38]
Chr7:54185..159075079 [GRCh37]
Chr7:149268..158767840 [NCBI36]
Chr7:7p22.3-q36.3		 pathogenic
GRCh38/hg38 7q35-36.2(chr7:147345844-153833351)x3 copy number gain See cases [RCV000135825] Chr7:147345844..153833351 [GRCh38]
Chr7:147042936..153530436 [GRCh37]
Chr7:146673869..153161369 [NCBI36]
Chr7:7q35-36.2		 pathogenic
GRCh38/hg38 7q33-36.2(chr7:137751200-154815582)x3 copy number gain See cases [RCV000136592] Chr7:137751200..154815582 [GRCh38]
Chr7:137435946..154607292 [GRCh37]
Chr7:137086486..154238225 [NCBI36]
Chr7:7q33-36.2		 pathogenic
GRCh38/hg38 7q21.3-36.3(chr7:97419852-158923762)x3 copy number gain See cases [RCV000136717] Chr7:97419852..158923762 [GRCh38]
Chr7:97049164..158716453 [GRCh37]
Chr7:96887100..158409214 [NCBI36]
Chr7:7q21.3-36.3		 pathogenic
GRCh38/hg38 7q34-36.3(chr7:141960861-159335866)x1 copy number loss See cases [RCV000137256] Chr7:141960861..159335866 [GRCh38]
Chr7:142528609..159128556 [GRCh37]
Chr7:141307130..158821317 [NCBI36]
Chr7:7q34-36.3		 pathogenic
GRCh38/hg38 7q35-36.3(chr7:145436544-159331441)x1 copy number loss See cases [RCV000137338] Chr7:145436544..159331441 [GRCh38]
Chr7:145133637..159124131 [GRCh37]
Chr7:144764570..158816892 [NCBI36]
Chr7:7q35-36.3		 pathogenic|likely pathogenic
GRCh38/hg38 7q35-36.3(chr7:145250254-159335866)x1 copy number loss See cases [RCV000138005] Chr7:145250254..159335866 [GRCh38]
Chr7:144947347..159128556 [GRCh37]
Chr7:144578280..158821317 [NCBI36]
Chr7:7q35-36.3		 pathogenic
GRCh38/hg38 7q33-36.3(chr7:134666829-158591882)x1 copy number loss See cases [RCV000138120] Chr7:134666829..158591882 [GRCh38]
Chr7:134351581..158384574 [GRCh37]
Chr7:134002121..158077335 [NCBI36]
Chr7:7q33-36.3		 pathogenic
GRCh38/hg38 7q35-36.3(chr7:146047157-157522158)x1 copy number loss See cases [RCV000137781] Chr7:146047157..157522158 [GRCh38]
Chr7:145744250..157314852 [GRCh37]
Chr7:145375183..157007613 [NCBI36]
Chr7:7q35-36.3		 pathogenic
GRCh38/hg38 7q31.32-36.3(chr7:121863759-159335865)x3 copy number gain See cases [RCV000138847] Chr7:121863759..159335865 [GRCh38]
Chr7:121503813..159128555 [GRCh37]
Chr7:121291049..158821316 [NCBI36]
Chr7:7q31.32-36.3		 pathogenic
GRCh38/hg38 7q35-36.1(chr7:143596735-150089125)x4 copy number gain See cases [RCV000138555] Chr7:143596735..150089125 [GRCh38]
Chr7:143293828..149786214 [GRCh37]
Chr7:143003950..149417147 [NCBI36]
Chr7:7q35-36.1		 likely pathogenic
GRCh38/hg38 7q32.3-36.3(chr7:132444095-159335866)x3 copy number gain See cases [RCV000139654] Chr7:132444095..159335866 [GRCh38]
Chr7:132128854..159128556 [GRCh37]
Chr7:131779394..158821317 [NCBI36]
Chr7:7q32.3-36.3		 pathogenic
GRCh38/hg38 7q31.2-36.3(chr7:115459015-159325817)x3 copy number gain See cases [RCV000141413] Chr7:115459015..159325817 [GRCh38]
Chr7:115099069..159118507 [GRCh37]
Chr7:114886305..158811268 [NCBI36]
Chr7:7q31.2-36.3		 pathogenic
GRCh38/hg38 7q32.3-36.3(chr7:131228764-159335866)x3 copy number gain See cases [RCV000142802] Chr7:131228764..159335866 [GRCh38]
Chr7:130913523..159128556 [GRCh37]
Chr7:130564063..158821317 [NCBI36]
Chr7:7q32.3-36.3		 pathogenic
GRCh38/hg38 7q32.3-36.3(chr7:131171478-159327017)x3 copy number gain See cases [RCV000143754] Chr7:131171478..159327017 [GRCh38]
Chr7:130856237..159119707 [GRCh37]
Chr7:130506777..158812468 [NCBI36]
Chr7:7q32.3-36.3		 pathogenic
GRCh38/hg38 7q32.3-36.3(chr7:132438072-159327017)x3 copy number gain See cases [RCV000143707] Chr7:132438072..159327017 [GRCh38]
Chr7:132122831..159119707 [GRCh37]
Chr7:131773371..158812468 [NCBI36]
Chr7:7q32.3-36.3		 pathogenic
GRCh38/hg38 7q35-36.3(chr7:147144002-159327017)x1 copy number loss See cases [RCV000143503] Chr7:147144002..159327017 [GRCh38]
Chr7:146841094..159119707 [GRCh37]
Chr7:146472027..158812468 [NCBI36]
Chr7:7q35-36.3		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43360-159119707)x1 copy number loss See cases [RCV000446044] Chr7:43360..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7q36.1(chr7:149174751-149523266)x1 copy number loss Breast ductal adenocarcinoma [RCV000207124] Chr7:149174751..149523266 [GRCh37]
Chr7:7q36.1		 uncertain significance
Single allele complex Breast ductal adenocarcinoma [RCV000207202] Chr7:149152906..149518148 [GRCh37]
Chr7:7q36.1		 uncertain significance
GRCh37/hg19 7q33-36.3(chr7:137589621-159119707)x3 copy number gain See cases [RCV000449264] Chr7:137589621..159119707 [GRCh37]
Chr7:7q33-36.3		 pathogenic
GRCh37/hg19 7q22.1-36.3(chr7:98969247-159119707)x3 copy number gain See cases [RCV000447709] Chr7:98969247..159119707 [GRCh37]
Chr7:7q22.1-36.3		 pathogenic
GRCh37/hg19 7q35-36.3(chr7:143839360-159138663) copy number loss Abnormal esophagus morphology [RCV000416719] Chr7:143839360..159138663 [GRCh37]
Chr7:7q35-36.3		 pathogenic
GRCh37/hg19 7q33-36.3(chr7:133799185-159119707)x1 copy number loss See cases [RCV000448836] Chr7:133799185..159119707 [GRCh37]
Chr7:7q33-36.3		 pathogenic
GRCh37/hg19 7q36.1-36.3(chr7:149261179-159075020)x3 copy number gain See cases [RCV000447776] Chr7:149261179..159075020 [GRCh37]
Chr7:7q36.1-36.3		 pathogenic
GRCh37/hg19 7q32.1-36.3(chr7:128276078-159119707)x3 copy number gain See cases [RCV000447956] Chr7:128276078..159119707 [GRCh37]
Chr7:7q32.1-36.3		 pathogenic
GRCh37/hg19 7q34-36.3(chr7:140636858-159119707)x1 copy number loss See cases [RCV000510250] Chr7:140636858..159119707 [GRCh37]
Chr7:7q34-36.3		 pathogenic
GRCh37/hg19 7q33-36.3(chr7:136758593-159119707)x3 copy number gain See cases [RCV000510490] Chr7:136758593..159119707 [GRCh37]
Chr7:7q33-36.3		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43361-159119707) copy number gain See cases [RCV000510686] Chr7:43361..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7q33-36.3(chr7:137917376-159119707)x1 copy number loss See cases [RCV000511889] Chr7:137917376..159119707 [GRCh37]
Chr7:7q33-36.3		 pathogenic
GRCh37/hg19 7q36.1(chr7:148189771-150867270)x4 copy number gain See cases [RCV000511618] Chr7:148189771..150867270 [GRCh37]
Chr7:7q36.1		 uncertain significance
GRCh37/hg19 7p22.3-q36.3(chr7:43361-159119707)x3 copy number gain See cases [RCV000511549] Chr7:43361..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh38/hg38 7q34-36.3(chr7:138620939-159233475)x3 copy number gain Neurodevelopmental disorder [RCV003327610] Chr7:138620939..159233475 [GRCh38]
Chr7:7q34-36.3		 likely pathogenic
GRCh37/hg19 7q22.1-36.3(chr7:98693388-159119707)x3 copy number gain not provided [RCV000682911] Chr7:98693388..159119707 [GRCh37]
Chr7:7q22.1-36.3		 pathogenic
GRCh37/hg19 7q34-36.3(chr7:140133025-158982771)x1 copy number loss not provided [RCV000682910] Chr7:140133025..158982771 [GRCh37]
Chr7:7q34-36.3		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:10704-159122532)x3 copy number gain not provided [RCV000746278] Chr7:10704..159122532 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:44935-159126310)x3 copy number gain not provided [RCV000746280] Chr7:44935..159126310 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7q34-36.3(chr7:139623170-158329903)x3 copy number gain not provided [RCV000747070] Chr7:139623170..158329903 [GRCh37]
Chr7:7q34-36.3		 pathogenic
GRCh37/hg19 7q34-36.3(chr7:141938235-159126310)x1 copy number loss not provided [RCV000747083] Chr7:141938235..159126310 [GRCh37]
Chr7:7q34-36.3		 pathogenic
GRCh37/hg19 7q35-36.1(chr7:143711059-152573935)x3 copy number gain not provided [RCV000747094] Chr7:143711059..152573935 [GRCh37]
Chr7:7q35-36.1		 benign
GRCh37/hg19 7q36.1-36.3(chr7:148238976-159126310)x1 copy number loss not provided [RCV000747115] Chr7:148238976..159126310 [GRCh37]
Chr7:7q36.1-36.3		 pathogenic
GRCh37/hg19 7q36.1(chr7:149363363-149711224)x3 copy number gain not provided [RCV000747126] Chr7:149363363..149711224 [GRCh37]
Chr7:7q36.1		 benign
GRCh37/hg19 7q36.1(chr7:149422718-149430874)x1 copy number loss not provided [RCV000747127] Chr7:149422718..149430874 [GRCh37]
Chr7:7q36.1		 benign
GRCh37/hg19 7p22.3-q36.3(chr7:10365-159119707)x3 copy number gain not provided [RCV000848126] Chr7:10365..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7q32.1-36.3(chr7:128312450-159119220) copy number gain not provided [RCV000767558] Chr7:128312450..159119220 [GRCh37]
Chr7:7q32.1-36.3		 pathogenic
Single allele duplication not provided [RCV000844986] Chr7:147897705..149874566 [GRCh37]
Chr7:7q35-36.1		 not provided
NM_001290187.2(KRBA1):c.1031-4G>A single nucleotide variant not provided [RCV001009561] Chr7:149724648 [GRCh38]
Chr7:149421739 [GRCh37]
Chr7:7q36.1		 not provided
NM_001290187.2(KRBA1):c.742T>C (p.Cys248Arg) single nucleotide variant not provided [RCV001009560] Chr7:149722824 [GRCh38]
Chr7:149419915 [GRCh37]
Chr7:7q36.1		 not provided
GRCh37/hg19 7q31.1-36.3(chr7:109251060-159119707)x3 copy number gain not provided [RCV001005994] Chr7:109251060..159119707 [GRCh37]
Chr7:7q31.1-36.3		 pathogenic
GRCh37/hg19 7q32.3-36.3(chr7:130592554-159119707)x3 copy number gain not provided [RCV000849569] Chr7:130592554..159119707 [GRCh37]
Chr7:7q32.3-36.3		 pathogenic
GRCh38/hg38 7q33-36.3(chr7:137463392-159345973)x3 copy number gain Neurodevelopmental disorder [RCV003327609] Chr7:137463392..159345973 [GRCh38]
Chr7:7q33-36.3		 pathogenic
GRCh37/hg19 7q35-36.3(chr7:145962558-159119707)x1 copy number loss not provided [RCV001006022] Chr7:145962558..159119707 [GRCh37]
Chr7:7q35-36.3		 pathogenic
GRCh37/hg19 7q32.3-36.3(chr7:131414604-159126310)x1 copy number loss See cases [RCV001007432] Chr7:131414604..159126310 [GRCh37]
Chr7:7q32.3-36.3		 pathogenic
GRCh37/hg19 7q35-36.1(chr7:147897705-149874566)x3 copy number loss not provided [RCV001249216] Chr7:147897705..149874566 [GRCh37]
Chr7:7q35-36.1		 not provided
GRCh37/hg19 7q35-36.3(chr7:143107740-156886246)x3 copy number gain not provided [RCV001249383] Chr7:143107740..156886246 [GRCh37]
Chr7:7q35-36.3		 not provided
GRCh37/hg19 7q36.1(chr7:149365302-149863491)x3 copy number gain not provided [RCV001258985] Chr7:149365302..149863491 [GRCh37]
Chr7:7q36.1		 uncertain significance
GRCh37/hg19 7q33-36.3(chr7:133851002-159119707)x3 copy number gain not provided [RCV001834520] Chr7:133851002..159119707 [GRCh37]
Chr7:7q33-36.3		 pathogenic
GRCh37/hg19 7q36.1-36.3(chr7:148695373-159119707)x1 copy number loss not provided [RCV001832910] Chr7:148695373..159119707 [GRCh37]
Chr7:7q36.1-36.3		 pathogenic
GRCh37/hg19 7q36.1-36.3(chr7:148153261-157543640)x3 copy number gain not provided [RCV001827941] Chr7:148153261..157543640 [GRCh37]
Chr7:7q36.1-36.3		 pathogenic
Single allele complex Ring chromosome 7 [RCV002280646] Chr7:43360..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
NC_000007.13:g.(?_130781014)_(150301047_?)del deletion not provided [RCV003116360] Chr7:130781014..150301047 [GRCh37]
Chr7:7q32.3-36.1		 pathogenic
GRCh37/hg19 7q36.1-36.3(chr7:149062717-159124131)x1 copy number loss not provided [RCV002279756] Chr7:149062717..159124131 [GRCh37]
Chr7:7q36.1-36.3		 pathogenic
GRCh37/hg19 7q35-36.3(chr7:146927174-159128556)x3 copy number gain not provided [RCV002279740] Chr7:146927174..159128556 [GRCh37]
Chr7:7q35-36.3		 pathogenic
GRCh37/hg19 7q36.1(chr7:149332630-151498689)x1 copy number loss not provided [RCV002472413] Chr7:149332630..151498689 [GRCh37]
Chr7:7q36.1		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:56604613-96692931)x1 copy number loss See cases [RCV002287832] Chr7:56604613..96692931 [GRCh37]
Chr7:7p22.3-q36.3		 uncertain significance
NM_001290187.2(KRBA1):c.3010C>T (p.Pro1004Ser) single nucleotide variant Inborn genetic diseases [RCV003282756] Chr7:149733862 [GRCh38]
Chr7:149430951 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.118T>C (p.Tyr40His) single nucleotide variant Inborn genetic diseases [RCV003257424] Chr7:149719651 [GRCh38]
Chr7:149416742 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.2984T>G (p.Leu995Arg) single nucleotide variant Inborn genetic diseases [RCV002901182] Chr7:149733836 [GRCh38]
Chr7:149430925 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.1210T>C (p.Trp404Arg) single nucleotide variant Inborn genetic diseases [RCV002882910] Chr7:149724831 [GRCh38]
Chr7:149421922 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.110G>A (p.Arg37Gln) single nucleotide variant Inborn genetic diseases [RCV002883397] Chr7:149719643 [GRCh38]
Chr7:149416734 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.2095C>T (p.Pro699Ser) single nucleotide variant Inborn genetic diseases [RCV002945509] Chr7:149730329 [GRCh38]
Chr7:149427419 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.125C>T (p.Thr42Met) single nucleotide variant Inborn genetic diseases [RCV002687001] Chr7:149719658 [GRCh38]
Chr7:149416749 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.1775G>C (p.Arg592Thr) single nucleotide variant Inborn genetic diseases [RCV002879614] Chr7:149729233 [GRCh38]
Chr7:149426323 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.1081G>C (p.Gly361Arg) single nucleotide variant Inborn genetic diseases [RCV002739151] Chr7:149724702 [GRCh38]
Chr7:149421793 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.416-3C>T single nucleotide variant Inborn genetic diseases [RCV002757387] Chr7:149721380 [GRCh38]
Chr7:149418471 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.283C>T (p.His95Tyr) single nucleotide variant Inborn genetic diseases [RCV002822730] Chr7:149720858 [GRCh38]
Chr7:149417949 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.369C>A (p.Ser123Arg) single nucleotide variant Inborn genetic diseases [RCV002798765] Chr7:149720944 [GRCh38]
Chr7:149418035 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.1316C>T (p.Pro439Leu) single nucleotide variant Inborn genetic diseases [RCV002739470] Chr7:149725402 [GRCh38]
Chr7:149422493 [GRCh37]
Chr7:7q36.1		 likely benign
NM_001290187.2(KRBA1):c.2068C>T (p.Pro690Ser) single nucleotide variant Inborn genetic diseases [RCV002984065] Chr7:149730302 [GRCh38]
Chr7:149427392 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.2946C>A (p.His982Gln) single nucleotide variant Inborn genetic diseases [RCV002666503] Chr7:149733798 [GRCh38]
Chr7:149430887 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.622G>A (p.Gly208Arg) single nucleotide variant Inborn genetic diseases [RCV002825989] Chr7:149722475 [GRCh38]
Chr7:149419566 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.3106C>T (p.Pro1036Ser) single nucleotide variant Inborn genetic diseases [RCV002696899] Chr7:149733958 [GRCh38]
Chr7:149431047 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.731G>A (p.Gly244Asp) single nucleotide variant Inborn genetic diseases [RCV002804265] Chr7:149722813 [GRCh38]
Chr7:149419904 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.1271G>A (p.Cys424Tyr) single nucleotide variant Inborn genetic diseases [RCV002744119] Chr7:149725357 [GRCh38]
Chr7:149422448 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.689C>T (p.Thr230Ile) single nucleotide variant Inborn genetic diseases [RCV002916996] Chr7:149722542 [GRCh38]
Chr7:149419633 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.1994C>T (p.Ala665Val) single nucleotide variant Inborn genetic diseases [RCV002898136] Chr7:149730228 [GRCh38]
Chr7:149427318 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.928C>G (p.Leu310Val) single nucleotide variant Inborn genetic diseases [RCV002941393] Chr7:149723787 [GRCh38]
Chr7:149420878 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.2298G>T (p.Arg766Ser) single nucleotide variant Inborn genetic diseases [RCV002809759] Chr7:149731721 [GRCh38]
Chr7:149428811 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.577G>A (p.Asp193Asn) single nucleotide variant Inborn genetic diseases [RCV002936571] Chr7:149722430 [GRCh38]
Chr7:149419521 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.1162C>T (p.Leu388Phe) single nucleotide variant Inborn genetic diseases [RCV002896500] Chr7:149724783 [GRCh38]
Chr7:149421874 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.305T>C (p.Leu102Pro) single nucleotide variant Inborn genetic diseases [RCV002722285] Chr7:149720880 [GRCh38]
Chr7:149417971 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.946G>A (p.Ala316Thr) single nucleotide variant Inborn genetic diseases [RCV003215562] Chr7:149723805 [GRCh38]
Chr7:149420896 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.1675G>A (p.Ala559Thr) single nucleotide variant Inborn genetic diseases [RCV003214768] Chr7:149728621 [GRCh38]
Chr7:149425712 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.2822C>T (p.Thr941Ile) single nucleotide variant Inborn genetic diseases [RCV003185048] Chr7:149733674 [GRCh38]
Chr7:149430763 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.2386C>T (p.Pro796Ser) single nucleotide variant Inborn genetic diseases [RCV003175275] Chr7:149733238 [GRCh38]
Chr7:149430327 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.1888G>A (p.Gly630Arg) single nucleotide variant Inborn genetic diseases [RCV003211406] Chr7:149729346 [GRCh38]
Chr7:149426436 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.312G>C (p.Lys104Asn) single nucleotide variant Inborn genetic diseases [RCV003204252] Chr7:149720887 [GRCh38]
Chr7:149417978 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.2966G>A (p.Gly989Glu) single nucleotide variant Inborn genetic diseases [RCV003283861] Chr7:149733818 [GRCh38]
Chr7:149430907 [GRCh37]
Chr7:7q36.1		 uncertain significance
GRCh37/hg19 7q34-36.1(chr7:140154317-152551638)x1 copy number loss not provided [RCV003334300] Chr7:140154317..152551638 [GRCh37]
Chr7:7q34-36.1		 pathogenic
NM_001290187.2(KRBA1):c.1298C>T (p.Ser433Leu) single nucleotide variant Inborn genetic diseases [RCV003364087] Chr7:149725384 [GRCh38]
Chr7:149422475 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.2669C>T (p.Thr890Ile) single nucleotide variant Inborn genetic diseases [RCV003385002] Chr7:149733521 [GRCh38]
Chr7:149430610 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.1610T>C (p.Leu537Pro) single nucleotide variant Inborn genetic diseases [RCV003373563] Chr7:149728556 [GRCh38]
Chr7:149425647 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.980G>A (p.Gly327Glu) single nucleotide variant Inborn genetic diseases [RCV003350153] Chr7:149723839 [GRCh38]
Chr7:149420930 [GRCh37]
Chr7:7q36.1		 uncertain significance
NM_001290187.2(KRBA1):c.349G>A (p.Ala117Thr) single nucleotide variant Inborn genetic diseases [RCV003386326] Chr7:149720924 [GRCh38]
Chr7:149418015 [GRCh37]
Chr7:7q36.1		 likely benign
GRCh37/hg19 7q34-36.3(chr7:142099013-159119707)x1 copy number loss not provided [RCV003482989] Chr7:142099013..159119707 [GRCh37]
Chr7:7q34-36.3		 pathogenic
GRCh37/hg19 7q36.1(chr7:148538593-150967829)x1 copy number loss not provided [RCV003482992] Chr7:148538593..150967829 [GRCh37]
Chr7:7q36.1		 pathogenic
NM_001290187.2(KRBA1):c.820G>A (p.Gly274Ser) single nucleotide variant not provided [RCV003423822] Chr7:149722902 [GRCh38]
Chr7:149419993 [GRCh37]
Chr7:7q36.1		 likely benign
GRCh37/hg19 7q35-36.3(chr7:144940098-159119707)x1 copy number loss not provided [RCV003482991] Chr7:144940098..159119707 [GRCh37]
Chr7:7q35-36.3		 pathogenic
GRCh37/hg19 7q33-36.3(chr7:135639005-159119707)x1 copy number loss not provided [RCV003482988] Chr7:135639005..159119707 [GRCh37]
Chr7:7q33-36.3		 pathogenic
NM_001290187.2(KRBA1):c.1267G>A (p.Ala423Thr) single nucleotide variant not provided [RCV003434227] Chr7:149725353 [GRCh38]
Chr7:149422444 [GRCh37]
Chr7:7q36.1		 likely benign
NM_001290187.2(KRBA1):c.248G>C (p.Gly83Ala) single nucleotide variant not provided [RCV003423821] Chr7:149720116 [GRCh38]
Chr7:149417207 [GRCh37]
Chr7:7q36.1		 likely benign
GRCh37/hg19 7q36.1(chr7:148896264-150963866)x1 copy number loss not specified [RCV003986691] Chr7:148896264..150963866 [GRCh37]
Chr7:7q36.1		 pathogenic
GRCh37/hg19 7q33-36.3(chr7:137456457-159119707)x3 copy number gain not specified [RCV003986713] Chr7:137456457..159119707 [GRCh37]
Chr7:7q33-36.3		 pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:4094
Count of miRNA genes:1024
Interacting mature miRNAs:1286
Transcripts:ENST00000255992, ENST00000319551, ENST00000466546, ENST00000467333, ENST00000479560, ENST00000485033, ENST00000486744, ENST00000489951, ENST00000496080, ENST00000496259, ENST00000497895
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH92191  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh377149,418,877 - 149,419,018UniSTSGRCh37
Build 367149,049,810 - 149,049,951RGDNCBI36
Celera7144,088,087 - 144,088,228RGD
Cytogenetic Map7q36UniSTS
HuRef7143,495,141 - 143,495,282UniSTS
CRA_TCAGchr7v27148,756,884 - 148,757,025UniSTS
GeneMap99-GB4 RH Map7674.31UniSTS
SHGC-80632  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh377149,426,808 - 149,427,082UniSTSGRCh37
Build 367149,057,741 - 149,058,015RGDNCBI36
Celera7144,096,019 - 144,096,293RGD
Cytogenetic Map7q36UniSTS
HuRef7143,502,945 - 143,503,219UniSTS
CRA_TCAGchr7v27148,764,816 - 148,765,090UniSTS
TNG Radiation Hybrid Map770378.0UniSTS
RH44264  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh377149,431,362 - 149,431,509UniSTSGRCh37
Build 367149,062,295 - 149,062,442RGDNCBI36
Celera7144,100,574 - 144,100,721RGD
Cytogenetic Map7q36UniSTS
HuRef7143,507,500 - 143,507,647UniSTS
CRA_TCAGchr7v27148,769,371 - 148,769,518UniSTS
GeneMap99-GB4 RH Map7675.32UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 734 910 482 55 294 13 846 554 1560 146 867 293 45 686
Low 1613 2042 1205 531 1607 411 3509 1637 2170 272 589 1307 130 1 1204 2102 5 2
Below cutoff 30 39 37 37 45 40 1 4 2 1 1 8

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_029620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001290187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_032534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_172132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011516636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011516637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011516638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011516639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011516640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011516641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011516642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011516643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047420964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047420965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047420966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047420967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047420968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047420969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047420970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047420971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047420972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047420973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047420974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047420975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001744886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007060163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007060164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007060165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007060166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007060167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AACC02000041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB058765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC004897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL831935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC033229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC041587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC142722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC146667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC150330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC152409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU557058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ821224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ821225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ821226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ821227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ821228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ821229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF459639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF510992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000319551   ⟹   ENSP00000317165
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl7149,715,057 - 149,734,575 (+)Ensembl
RefSeq Acc Id: ENST00000467333   ⟹   ENSP00000418841
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl7149,720,950 - 149,722,040 (+)Ensembl
RefSeq Acc Id: ENST00000485033   ⟹   ENSP00000420112
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl7149,719,639 - 149,734,571 (+)Ensembl
RefSeq Acc Id: ENST00000486744   ⟹   ENSP00000419900
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl7149,714,781 - 149,720,124 (+)Ensembl
RefSeq Acc Id: ENST00000489951
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl7149,730,040 - 149,730,697 (+)Ensembl
RefSeq Acc Id: ENST00000496080
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl7149,723,561 - 149,725,441 (+)Ensembl
RefSeq Acc Id: ENST00000496259   ⟹   ENSP00000418647
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl7149,714,951 - 149,734,575 (+)Ensembl
RefSeq Acc Id: ENST00000497895   ⟹   ENSP00000417921
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl7149,719,422 - 149,720,990 (+)Ensembl
RefSeq Acc Id: ENST00000621069   ⟹   ENSP00000479341
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl7149,720,101 - 149,734,571 (+)Ensembl
RefSeq Acc Id: NM_001290187   ⟹   NP_001277116
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
CHM1_17149,420,687 - 149,440,251 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394478   ⟹   NP_001381407
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394479   ⟹   NP_001381408
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394480   ⟹   NP_001381409
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394481   ⟹   NP_001381410
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394482   ⟹   NP_001381411
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394483   ⟹   NP_001381412
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394484   ⟹   NP_001381413
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394485   ⟹   NP_001381414
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394486   ⟹   NP_001381415
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394487   ⟹   NP_001381416
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394488   ⟹   NP_001381417
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394489   ⟹   NP_001381418
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394490   ⟹   NP_001381419
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394491   ⟹   NP_001381420
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394492   ⟹   NP_001381421
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001394493   ⟹   NP_001381422
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,722,040 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,903,958 (+)NCBI
Sequence:
RefSeq Acc Id: NM_032534   ⟹   NP_115923
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
GRCh377149,412,061 - 149,431,664 (+)NCBI
Build 367149,043,081 - 149,062,597 (+)NCBI Archive
Celera7144,081,358 - 144,100,876 (+)RGD
HuRef7143,488,412 - 143,507,802 (+)RGD
CHM1_17149,420,687 - 149,440,251 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
CRA_TCAGchr7v27148,750,155 - 148,769,673 (+)RGD
Sequence:
RefSeq Acc Id: NR_172132
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047420964   ⟹   XP_047276920
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
RefSeq Acc Id: XM_047420965   ⟹   XP_047276921
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
RefSeq Acc Id: XM_047420966   ⟹   XP_047276922
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
RefSeq Acc Id: XM_047420967   ⟹   XP_047276923
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
RefSeq Acc Id: XM_047420968   ⟹   XP_047276924
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
RefSeq Acc Id: XM_047420969   ⟹   XP_047276925
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
RefSeq Acc Id: XM_047420970   ⟹   XP_047276926
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
RefSeq Acc Id: XM_047420971   ⟹   XP_047276927
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
RefSeq Acc Id: XM_047420972   ⟹   XP_047276928
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
RefSeq Acc Id: XM_047420973   ⟹   XP_047276929
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
RefSeq Acc Id: XM_047420974   ⟹   XP_047276930
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,729,751 (+)NCBI
RefSeq Acc Id: XM_047420975   ⟹   XP_047276931
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,719,469 - 149,734,575 (+)NCBI
RefSeq Acc Id: XM_054359236   ⟹   XP_054215211
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
RefSeq Acc Id: XM_054359237   ⟹   XP_054215212
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
RefSeq Acc Id: XM_054359238   ⟹   XP_054215213
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
RefSeq Acc Id: XM_054359239   ⟹   XP_054215214
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
RefSeq Acc Id: XM_054359240   ⟹   XP_054215215
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
RefSeq Acc Id: XM_054359241   ⟹   XP_054215216
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
RefSeq Acc Id: XM_054359242   ⟹   XP_054215217
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
RefSeq Acc Id: XM_054359243   ⟹   XP_054215218
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
RefSeq Acc Id: XM_054359244   ⟹   XP_054215219
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
RefSeq Acc Id: XM_054359245   ⟹   XP_054215220
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
RefSeq Acc Id: XM_054359246   ⟹   XP_054215221
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07150,896,867 - 150,912,159 (+)NCBI
RefSeq Acc Id: XM_054359247   ⟹   XP_054215222
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07150,901,387 - 150,916,494 (+)NCBI
RefSeq Acc Id: XR_007060163
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
RefSeq Acc Id: XR_007060164
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
RefSeq Acc Id: XR_007060165
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,951 - 149,734,575 (+)NCBI
RefSeq Acc Id: XR_007060166
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,719,469 - 149,734,575 (+)NCBI
RefSeq Acc Id: XR_007060167
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,719,469 - 149,734,575 (+)NCBI
RefSeq Acc Id: XR_008487761
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
RefSeq Acc Id: XR_008487762
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
RefSeq Acc Id: XR_008487763
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07150,896,867 - 150,916,494 (+)NCBI
RefSeq Acc Id: XR_008487764
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07150,901,387 - 150,916,494 (+)NCBI
RefSeq Acc Id: XR_008487765
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07150,901,387 - 150,916,494 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001277116 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381407 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381408 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381409 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381410 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381411 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381412 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381413 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381414 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381415 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381416 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381417 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381418 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381419 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381420 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381421 (Get FASTA)   NCBI Sequence Viewer  
  NP_001381422 (Get FASTA)   NCBI Sequence Viewer  
  NP_115923 (Get FASTA)   NCBI Sequence Viewer  
  XP_047276920 (Get FASTA)   NCBI Sequence Viewer  
  XP_047276921 (Get FASTA)   NCBI Sequence Viewer  
  XP_047276922 (Get FASTA)   NCBI Sequence Viewer  
  XP_047276923 (Get FASTA)   NCBI Sequence Viewer  
  XP_047276924 (Get FASTA)   NCBI Sequence Viewer  
  XP_047276925 (Get FASTA)   NCBI Sequence Viewer  
  XP_047276926 (Get FASTA)   NCBI Sequence Viewer  
  XP_047276927 (Get FASTA)   NCBI Sequence Viewer  
  XP_047276928 (Get FASTA)   NCBI Sequence Viewer  
  XP_047276929 (Get FASTA)   NCBI Sequence Viewer  
  XP_047276930 (Get FASTA)   NCBI Sequence Viewer  
  XP_047276931 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215211 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215212 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215213 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215214 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215215 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215216 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215217 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215218 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215219 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215220 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215221 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215222 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein A5PL33 (Get FASTA)   NCBI Sequence Viewer  
  AAH33229 (Get FASTA)   NCBI Sequence Viewer  
  AAH41587 (Get FASTA)   NCBI Sequence Viewer  
  AAI42723 (Get FASTA)   NCBI Sequence Viewer  
  AAI46668 (Get FASTA)   NCBI Sequence Viewer  
  AAI50331 (Get FASTA)   NCBI Sequence Viewer  
  AAI52410 (Get FASTA)   NCBI Sequence Viewer  
  ACQ90735 (Get FASTA)   NCBI Sequence Viewer  
  ACQ90736 (Get FASTA)   NCBI Sequence Viewer  
  ACQ90737 (Get FASTA)   NCBI Sequence Viewer  
  ACQ90738 (Get FASTA)   NCBI Sequence Viewer  
  ACQ90739 (Get FASTA)   NCBI Sequence Viewer  
  ACQ90740 (Get FASTA)   NCBI Sequence Viewer  
  BAB47491 (Get FASTA)   NCBI Sequence Viewer  
  EAL24434 (Get FASTA)   NCBI Sequence Viewer  
  EAW80035 (Get FASTA)   NCBI Sequence Viewer  
  EAW80036 (Get FASTA)   NCBI Sequence Viewer  
  EAW80037 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000317165
  ENSP00000317165.9
  ENSP00000417921.1
  ENSP00000418647
  ENSP00000418647.3
  ENSP00000418841.1
  ENSP00000419900.1
  ENSP00000420112
  ENSP00000420112.2
  ENSP00000479341
  ENSP00000479341.1
Reference Protein Sequences
RefSeq Acc Id: NP_115923   ⟸   NM_032534
- Peptide Label: isoform 1
- UniProtKB: Q8N4X0 (UniProtKB/Swiss-Prot),   E7ENE9 (UniProtKB/Swiss-Prot),   A7E2F5 (UniProtKB/Swiss-Prot),   Q96JG5 (UniProtKB/Swiss-Prot),   A5PL33 (UniProtKB/Swiss-Prot),   A0A090N8F5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001277116   ⟸   NM_001290187
- Peptide Label: isoform 2
- UniProtKB: A0A0C4DH65 (UniProtKB/TrEMBL),   A0A090N8F5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000479341   ⟸   ENST00000621069
RefSeq Acc Id: ENSP00000418841   ⟸   ENST00000467333
RefSeq Acc Id: ENSP00000418647   ⟸   ENST00000496259
RefSeq Acc Id: ENSP00000417921   ⟸   ENST00000497895
RefSeq Acc Id: ENSP00000420112   ⟸   ENST00000485033
RefSeq Acc Id: ENSP00000419900   ⟸   ENST00000486744
RefSeq Acc Id: ENSP00000317165   ⟸   ENST00000319551
RefSeq Acc Id: NP_001381412   ⟸   NM_001394483
- Peptide Label: isoform 7
- UniProtKB: A0A090N8F5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001381420   ⟸   NM_001394491
- Peptide Label: isoform 17
- UniProtKB: A0A090N8F5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001381414   ⟸   NM_001394485
- Peptide Label: isoform 9
- UniProtKB: A0A090N8F5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001381421   ⟸   NM_001394492
- Peptide Label: isoform 15
- UniProtKB: A0A087WVC5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001381411   ⟸   NM_001394482
- Peptide Label: isoform 7
- UniProtKB: A0A090N8F5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001381417   ⟸   NM_001394488
- Peptide Label: isoform 12
- UniProtKB: A0A087WVC5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001381408   ⟸   NM_001394479
- Peptide Label: isoform 4
- UniProtKB: A0A090N8F5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001381415   ⟸   NM_001394486
- Peptide Label: isoform 10
RefSeq Acc Id: NP_001381407   ⟸   NM_001394478
- Peptide Label: isoform 3
- UniProtKB: A0A090N8F5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001381416   ⟸   NM_001394487
- Peptide Label: isoform 11
RefSeq Acc Id: NP_001381413   ⟸   NM_001394484
- Peptide Label: isoform 8
- UniProtKB: A0A090N8F5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001381418   ⟸   NM_001394489
- Peptide Label: isoform 13
- UniProtKB: A0A087WVC5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001381409   ⟸   NM_001394480
- Peptide Label: isoform 5
- UniProtKB: A0A090N8F5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001381410   ⟸   NM_001394481
- Peptide Label: isoform 6
- UniProtKB: A0A090N8F5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001381419   ⟸   NM_001394490
- Peptide Label: isoform 14
- UniProtKB: A0A087WVC5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001381422   ⟸   NM_001394493
- Peptide Label: isoform 16
RefSeq Acc Id: XP_047276920   ⟸   XM_047420964
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047276925   ⟸   XM_047420969
- Peptide Label: isoform X6
RefSeq Acc Id: XP_047276921   ⟸   XM_047420965
- Peptide Label: isoform X2
RefSeq Acc Id: XP_047276926   ⟸   XM_047420970
- Peptide Label: isoform X7
RefSeq Acc Id: XP_047276922   ⟸   XM_047420966
- Peptide Label: isoform X3
RefSeq Acc Id: XP_047276923   ⟸   XM_047420967
- Peptide Label: isoform X4
RefSeq Acc Id: XP_047276924   ⟸   XM_047420968
- Peptide Label: isoform X5
- UniProtKB: Q8N4X0 (UniProtKB/Swiss-Prot),   E7ENE9 (UniProtKB/Swiss-Prot),   A7E2F5 (UniProtKB/Swiss-Prot),   A5PL33 (UniProtKB/Swiss-Prot),   Q96JG5 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047276927   ⟸   XM_047420971
- Peptide Label: isoform X8
RefSeq Acc Id: XP_047276928   ⟸   XM_047420972
- Peptide Label: isoform X9
RefSeq Acc Id: XP_047276929   ⟸   XM_047420973
- Peptide Label: isoform X10
RefSeq Acc Id: XP_047276930   ⟸   XM_047420974
- Peptide Label: isoform X11
RefSeq Acc Id: XP_047276931   ⟸   XM_047420975
- Peptide Label: isoform X12
RefSeq Acc Id: XP_054215211   ⟸   XM_054359236
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215216   ⟸   XM_054359241
- Peptide Label: isoform X6
RefSeq Acc Id: XP_054215212   ⟸   XM_054359237
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054215217   ⟸   XM_054359242
- Peptide Label: isoform X7
RefSeq Acc Id: XP_054215213   ⟸   XM_054359238
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054215214   ⟸   XM_054359239
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054215215   ⟸   XM_054359240
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054215218   ⟸   XM_054359243
- Peptide Label: isoform X8
RefSeq Acc Id: XP_054215219   ⟸   XM_054359244
- Peptide Label: isoform X9
RefSeq Acc Id: XP_054215220   ⟸   XM_054359245
- Peptide Label: isoform X10
RefSeq Acc Id: XP_054215221   ⟸   XM_054359246
- Peptide Label: isoform X11
RefSeq Acc Id: XP_054215222   ⟸   XM_054359247
- Peptide Label: isoform X12
Protein Domains
KRAB

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A5PL33-F1-model_v2 AlphaFold A5PL33 1-1030 view protein structure

Promoters
RGD ID:6805872
Promoter ID:HG_KWN:60222
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   K562,   Lymphoblastoid
Transcripts:ENST00000255992,   ENST00000319551,   NM_032534,   UC010LPJ.1
Position:
Human AssemblyChrPosition (strand)Source
Build 367149,042,516 - 149,043,217 (+)MPROMDB
RGD ID:6805853
Promoter ID:HG_KWN:60223
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562,   Lymphoblastoid
Transcripts:UC003WGA.1
Position:
Human AssemblyChrPosition (strand)Source
Build 367149,047,266 - 149,048,317 (+)MPROMDB
RGD ID:6805854
Promoter ID:HG_KWN:60224
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:UC003WGB.1
Position:
Human AssemblyChrPosition (strand)Source
Build 367149,051,166 - 149,051,666 (+)MPROMDB
RGD ID:7212241
Promoter ID:EPDNEW_H11867
Type:initiation region
Name:KRBA1_1
Description:KRAB-A domain containing 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H11868  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,714,953 - 149,715,013EPDNEW
RGD ID:7212243
Promoter ID:EPDNEW_H11868
Type:single initiation site
Name:KRBA1_2
Description:KRAB-A domain containing 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H11867  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh387149,718,538 - 149,718,598EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:22228 AgrOrtholog
COSMIC KRBA1 COSMIC
Ensembl Genes ENSG00000133619 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000319551 ENTREZGENE
  ENST00000319551.12 UniProtKB/Swiss-Prot
  ENST00000467333.1 UniProtKB/TrEMBL
  ENST00000485033 ENTREZGENE
  ENST00000485033.6 UniProtKB/Swiss-Prot
  ENST00000486744.3 UniProtKB/TrEMBL
  ENST00000496259 ENTREZGENE
  ENST00000496259.6 UniProtKB/TrEMBL
  ENST00000497895.5 UniProtKB/TrEMBL
  ENST00000621069 ENTREZGENE
  ENST00000621069.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
GTEx ENSG00000133619 GTEx
HGNC ID HGNC:22228 ENTREZGENE
Human Proteome Map KRBA1 Human Proteome Map
InterPro KRAB_dom_sf UniProtKB/TrEMBL
  KRBA1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KRBA1_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Krueppel-associated_box UniProtKB/TrEMBL
KEGG Report hsa:84626 UniProtKB/Swiss-Prot
NCBI Gene 84626 ENTREZGENE
PANTHER PROTEIN KRBA1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR22740 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam KRAB UniProtKB/TrEMBL
  KRBA1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA162393641 PharmGKB
PROSITE KRAB UniProtKB/TrEMBL
SMART KRAB UniProtKB/TrEMBL
  KRBA1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF109640 UniProtKB/TrEMBL
UniProt A0A087WVC5 ENTREZGENE, UniProtKB/TrEMBL
  A0A090N8F5 ENTREZGENE, UniProtKB/TrEMBL
  A0A0C4DH65 ENTREZGENE, UniProtKB/TrEMBL
  A5PL33 ENTREZGENE
  A7E2F5 ENTREZGENE
  C9J5U6_HUMAN UniProtKB/TrEMBL
  C9JYG0_HUMAN UniProtKB/TrEMBL
  E7ENE9 ENTREZGENE
  H7C530_HUMAN UniProtKB/TrEMBL
  KRBA1_HUMAN UniProtKB/Swiss-Prot
  Q8N4X0 ENTREZGENE
  Q96JG5 ENTREZGENE
UniProt Secondary A7E2F5 UniProtKB/Swiss-Prot
  E7ENE9 UniProtKB/Swiss-Prot
  Q8N4X0 UniProtKB/Swiss-Prot
  Q96JG5 UniProtKB/Swiss-Prot