SHF (Src homology 2 domain containing F) - Rat Genome Database

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Gene: SHF (Src homology 2 domain containing F) Homo sapiens
Analyze
Symbol: SHF
Name: Src homology 2 domain containing F
RGD ID: 1602197
HGNC Page HGNC:25116
Description: Predicted to enable phosphotyrosine residue binding activity. Predicted to be involved in apoptotic process.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: CTD-2651B20.7; MGC126650; MGC126652; SH2 domain-containing adapter protein F
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381545,167,214 - 45,201,116 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1545,167,214 - 45,201,175 (-)EnsemblGRCh38hg38GRCh38
GRCh371545,459,412 - 45,493,314 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361543,246,704 - 43,280,665 (-)NCBINCBI36Build 36hg18NCBI36
Celera1522,350,695 - 22,384,650 (-)NCBICelera
Cytogenetic Map15q21.1NCBI
HuRef1522,283,482 - 22,317,406 (-)NCBIHuRef
CHM1_11545,578,088 - 45,611,982 (-)NCBICHM1_1
T2T-CHM13v2.01542,975,223 - 43,009,099 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:11095946   PMID:12477932   PMID:14702039   PMID:15146197   PMID:21873635   PMID:23360421   PMID:29987050   PMID:32296183   PMID:35843865   PMID:36527512  


Genomics

Comparative Map Data
SHF
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381545,167,214 - 45,201,116 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1545,167,214 - 45,201,175 (-)EnsemblGRCh38hg38GRCh38
GRCh371545,459,412 - 45,493,314 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361543,246,704 - 43,280,665 (-)NCBINCBI36Build 36hg18NCBI36
Celera1522,350,695 - 22,384,650 (-)NCBICelera
Cytogenetic Map15q21.1NCBI
HuRef1522,283,482 - 22,317,406 (-)NCBIHuRef
CHM1_11545,578,088 - 45,611,982 (-)NCBICHM1_1
T2T-CHM13v2.01542,975,223 - 43,009,099 (-)NCBIT2T-CHM13v2.0
Shf
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392122,179,373 - 122,199,650 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2122,179,373 - 122,199,643 (-)EnsemblGRCm39 Ensembl
GRCm382122,348,892 - 122,369,147 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2122,348,892 - 122,369,162 (-)EnsemblGRCm38mm10GRCm38
MGSCv372122,174,628 - 122,194,654 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362122,040,333 - 122,058,265 (-)NCBIMGSCv36mm8
Celera2123,498,710 - 123,518,780 (-)NCBICelera
Cytogenetic Map2E5NCBI
cM Map260.63NCBI
Shf
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83129,749,903 - 129,769,912 (-)NCBIGRCr8
mRatBN7.23109,296,517 - 109,316,315 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3109,296,784 - 109,316,328 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.03114,288,021 - 114,307,334 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3114,287,718 - 114,307,250 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03120,827,311 - 120,837,513 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43109,129,634 - 109,169,928 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera3108,194,195 - 108,213,507 (-)NCBICelera
Cytogenetic Map3q35NCBI
Shf
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554098,201,663 - 8,227,921 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554098,219,295 - 8,227,877 (+)NCBIChiLan1.0ChiLan1.0
SHF
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21634,393,075 - 34,439,369 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11538,571,242 - 38,617,573 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01524,100,832 - 24,146,702 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11542,468,468 - 42,489,184 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1542,469,202 - 42,500,239 (-)Ensemblpanpan1.1panPan2
SHF
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13011,589,648 - 11,609,425 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3011,590,211 - 11,609,837 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3011,645,934 - 11,665,283 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03011,726,634 - 11,745,945 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3011,717,866 - 11,745,945 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13011,633,079 - 11,652,390 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03011,755,585 - 11,774,926 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03011,875,432 - 11,894,798 (-)NCBIUU_Cfam_GSD_1.0
Shf
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864090,033,406 - 90,053,526 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364717,879,141 - 7,901,589 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364717,881,484 - 7,901,583 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SHF
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1126,549,747 - 126,570,859 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11126,549,736 - 126,570,657 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21141,148,729 - 141,169,643 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SHF
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12638,005,743 - 38,036,378 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666048103,022,623 - 103,043,343 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Shf
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473114,064,741 - 14,079,957 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473114,064,741 - 14,079,849 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SHF
22 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 15q21.1(chr15:44765914-45476854)x3 copy number gain See cases [RCV000139024] Chr15:44765914..45476854 [GRCh38]
Chr15:45058112..45769052 [GRCh37]
Chr15:42845404..43556344 [NCBI36]
Chr15:15q21.1		 uncertain significance
GRCh38/hg38 15q21.1(chr15:45026980-45579878)x3 copy number gain See cases [RCV000143255] Chr15:45026980..45579878 [GRCh38]
Chr15:45319178..45872076 [GRCh37]
Chr15:43106470..43659368 [NCBI36]
Chr15:15q21.1		 uncertain significance
GRCh38/hg38 15q21.1(chr15:45032714-45592481)x3 copy number gain See cases [RCV000143502] Chr15:45032714..45592481 [GRCh38]
Chr15:45324912..45884679 [GRCh37]
Chr15:43112204..43671971 [NCBI36]
Chr15:15q21.1		 uncertain significance
GRCh37/hg19 15q21.1(chr15:45059827-45725363)x3 copy number gain See cases [RCV000239920] Chr15:45059827..45725363 [GRCh37]
Chr15:15q21.1		 uncertain significance
GRCh37/hg19 15q15.3-21.1(chr15:44484701-47475522)x1 copy number loss See cases [RCV000240380] Chr15:44484701..47475522 [GRCh37]
Chr15:15q15.3-21.1		 uncertain significance
GRCh37/hg19 15q15.1-26.3(chr15:41745084-102354798)x4 copy number gain See cases [RCV000447123] Chr15:41745084..102354798 [GRCh37]
Chr15:15q15.1-26.3		 pathogenic
GRCh37/hg19 15q15.2-21.2(chr15:42850434-49592633)x1 copy number loss See cases [RCV000447035] Chr15:42850434..49592633 [GRCh37]
Chr15:15q15.2-21.2		 pathogenic
GRCh37/hg19 15q11.2-26.3(chr15:20733395-102511616)x4 copy number gain See cases [RCV000447765] Chr15:20733395..102511616 [GRCh37]
Chr15:15q11.2-26.3		 pathogenic
GRCh37/hg19 15q21.1(chr15:45056077-45772114)x3 copy number gain See cases [RCV000447851] Chr15:45056077..45772114 [GRCh37]
Chr15:15q21.1		 uncertain significance
GRCh37/hg19 15q15.1-21.2(chr15:41689327-52446981)x1 copy number loss See cases [RCV000448968] Chr15:41689327..52446981 [GRCh37]
Chr15:15q15.1-21.2		 pathogenic
GRCh37/hg19 15q21.1(chr15:45056077-45772114)x3 copy number gain See cases [RCV000510282] Chr15:45056077..45772114 [GRCh37]
Chr15:15q21.1		 uncertain significance
GRCh37/hg19 15q11.2-26.3(chr15:22770422-102429112)x3 copy number gain See cases [RCV000510717] Chr15:22770422..102429112 [GRCh37]
Chr15:15q11.2-26.3		 pathogenic
GRCh37/hg19 15q11.2-26.3(chr15:22770422-102429112) copy number gain See cases [RCV000512019] Chr15:22770422..102429112 [GRCh37]
Chr15:15q11.2-26.3		 pathogenic
NM_138356.3(SHF):c.83A>G (p.His28Arg) single nucleotide variant Inborn genetic diseases [RCV003245336] Chr15:45198992 [GRCh38]
Chr15:45491190 [GRCh37]
Chr15:15q21.1		 uncertain significance
Single allele duplication not provided [RCV000677926] Chr15:31115047..102354857 [GRCh37]
Chr15:15q13.2-26.3		 pathogenic
GRCh37/hg19 15q15.3-21.3(chr15:43759773-53252240)x1 copy number loss not provided [RCV000683686] Chr15:43759773..53252240 [GRCh37]
Chr15:15q15.3-21.3		 pathogenic
NC_000015.9:g.(?_45152372)_(45670671_?)dup duplication Arginine:glycine amidinotransferase deficiency [RCV000708477] Chr15:44860174..45378473 [GRCh38]
Chr15:45152372..45670671 [GRCh37]
Chr15:15q21.1		 uncertain significance
GRCh37/hg19 15q21.1(chr15:45142419-45889706)x3 copy number gain not provided [RCV000751298] Chr15:45142419..45889706 [GRCh37]
Chr15:15q21.1		 benign
GRCh37/hg19 15q11.1-26.3(chr15:20016811-102493540)x3 copy number gain not provided [RCV000751155] Chr15:20016811..102493540 [GRCh37]
Chr15:15q11.1-26.3		 pathogenic
GRCh37/hg19 15q11.1-26.3(chr15:20071673-102461162)x3 copy number gain not provided [RCV000751156] Chr15:20071673..102461162 [GRCh37]
Chr15:15q11.1-26.3		 pathogenic
GRCh37/hg19 15q21.1(chr15:45063803-45772378)x3 copy number gain not provided [RCV000846392] Chr15:45063803..45772378 [GRCh37]
Chr15:15q21.1		 uncertain significance
NM_001394037.1(SHF):c.594A>T (p.Glu198Asp) single nucleotide variant Inborn genetic diseases [RCV003291475] Chr15:45178211 [GRCh38]
Chr15:45470409 [GRCh37]
Chr15:15q21.1		 uncertain significance
NC_000015.9:g.(?_45152372)_(45670651_?)dup duplication Arginine:glycine amidinotransferase deficiency [RCV003107422] Chr15:45152372..45670651 [GRCh37]
Chr15:15q21.1		 uncertain significance
GRCh37/hg19 15q21.1(chr15:45056077-45772378)x3 copy number gain not provided [RCV001259210] Chr15:45056077..45772378 [GRCh37]
Chr15:15q21.1		 uncertain significance
NC_000015.9:g.(?_32964879)_(91358519_?)dup duplication Bloom syndrome [RCV001343104]|Familial colorectal cancer [RCV001325176] Chr15:32964879..91358519 [GRCh37]
Chr15:15q13.3-26.1		 uncertain significance
NC_000015.9:g.(?_44855319)_(45898712_?)dup duplication Arginine:glycine amidinotransferase deficiency [RCV001304383] Chr15:44855319..45898712 [GRCh37]
Chr15:15q21.1		 uncertain significance
GRCh37/hg19 15q15.2-21.2(chr15:42850434-49592633) copy number loss not specified [RCV002052466] Chr15:42850434..49592633 [GRCh37]
Chr15:15q15.2-21.2		 pathogenic
GRCh37/hg19 15q21.1(chr15:45056077-45772114) copy number gain not specified [RCV002052469] Chr15:45056077..45772114 [GRCh37]
Chr15:15q21.1		 uncertain significance
NM_001394037.1(SHF):c.749C>A (p.Pro250His) single nucleotide variant Inborn genetic diseases [RCV003286440] Chr15:45175317 [GRCh38]
Chr15:45467515 [GRCh37]
Chr15:15q21.1		 uncertain significance
NM_001394037.1(SHF):c.530T>C (p.Phe177Ser) single nucleotide variant Inborn genetic diseases [RCV002688543] Chr15:45178275 [GRCh38]
Chr15:45470473 [GRCh37]
Chr15:15q21.1		 uncertain significance
NM_001394037.1(SHF):c.633G>A (p.Met211Ile) single nucleotide variant Inborn genetic diseases [RCV002910986] Chr15:45178172 [GRCh38]
Chr15:45470370 [GRCh37]
Chr15:15q21.1		 uncertain significance
NM_001394037.1(SHF):c.1336G>C (p.Val446Leu) single nucleotide variant Inborn genetic diseases [RCV002757118] Chr15:45168078 [GRCh38]
Chr15:45460276 [GRCh37]
Chr15:15q21.1		 uncertain significance
NM_138356.3(SHF):c.196T>C (p.Ser66Pro) single nucleotide variant Inborn genetic diseases [RCV002691911] Chr15:45198879 [GRCh38]
Chr15:45491077 [GRCh37]
Chr15:15q21.1		 uncertain significance
NM_001394037.1(SHF):c.1055C>T (p.Pro352Leu) single nucleotide variant Inborn genetic diseases [RCV002784898] Chr15:45172252 [GRCh38]
Chr15:45464450 [GRCh37]
Chr15:15q21.1		 uncertain significance
NM_001394037.1(SHF):c.827G>A (p.Arg276Gln) single nucleotide variant Inborn genetic diseases [RCV002705157] Chr15:45175239 [GRCh38]
Chr15:45467437 [GRCh37]
Chr15:15q21.1		 uncertain significance
NM_001394037.1(SHF):c.839C>T (p.Ala280Val) single nucleotide variant Inborn genetic diseases [RCV002873480] Chr15:45175227 [GRCh38]
Chr15:45467425 [GRCh37]
Chr15:15q21.1		 uncertain significance
NM_001394037.1(SHF):c.1354C>T (p.Pro452Ser) single nucleotide variant Inborn genetic diseases [RCV002826751] Chr15:45168060 [GRCh38]
Chr15:45460258 [GRCh37]
Chr15:15q21.1		 uncertain significance
NM_001394037.1(SHF):c.848T>C (p.Val283Ala) single nucleotide variant Inborn genetic diseases [RCV002786829] Chr15:45173716 [GRCh38]
Chr15:45465914 [GRCh37]
Chr15:15q21.1		 uncertain significance
NM_138356.3(SHF):c.285C>G (p.Asp95Glu) single nucleotide variant Inborn genetic diseases [RCV002697700] Chr15:45198790 [GRCh38]
Chr15:45490988 [GRCh37]
Chr15:15q21.1		 uncertain significance
NM_001394037.1(SHF):c.1045C>T (p.Arg349Trp) single nucleotide variant Inborn genetic diseases [RCV002854816] Chr15:45172262 [GRCh38]
Chr15:45464460 [GRCh37]
Chr15:15q21.1		 uncertain significance
NM_138356.3(SHF):c.247C>T (p.Arg83Trp) single nucleotide variant Inborn genetic diseases [RCV003194716] Chr15:45198828 [GRCh38]
Chr15:45491026 [GRCh37]
Chr15:15q21.1		 uncertain significance
GRCh38/hg38 15q21.1(chr15:45092835-45433283) copy number gain Anomalous pulmonary venous return [RCV003223576] Chr15:45092835..45433283 [GRCh38]
Chr15:15q21.1		 uncertain significance
NM_001394037.1(SHF):c.574G>A (p.Ala192Thr) single nucleotide variant Inborn genetic diseases [RCV003260834] Chr15:45178231 [GRCh38]
Chr15:45470429 [GRCh37]
Chr15:15q21.1		 uncertain significance
NM_001394037.1(SHF):c.1400G>A (p.Arg467His) single nucleotide variant Inborn genetic diseases [RCV003262569] Chr15:45168014 [GRCh38]
Chr15:45460212 [GRCh37]
Chr15:15q21.1		 uncertain significance
NM_001394037.1(SHF):c.1004C>T (p.Pro335Leu) single nucleotide variant Inborn genetic diseases [RCV003306668] Chr15:45172303 [GRCh38]
Chr15:45464501 [GRCh37]
Chr15:15q21.1		 uncertain significance
Single allele deletion not provided [RCV003448697] Chr15:41321409..51718601 [GRCh37]
Chr15:15q15.1-21.2		 pathogenic
GRCh37/hg19 15q11.2-21.2(chr15:22770421-50347130)x3 copy number gain not specified [RCV003987108] Chr15:22770421..50347130 [GRCh37]
Chr15:15q11.2-21.2		 pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:5130
Count of miRNA genes:1014
Interacting mature miRNAs:1272
Transcripts:ENST00000290894, ENST00000318390, ENST00000458022, ENST00000558294, ENST00000558685, ENST00000559566, ENST00000560471, ENST00000560540, ENST00000560734, ENST00000561091, ENST00000561239, ENST00000561278
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH66736  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371545,459,427 - 45,459,558UniSTSGRCh37
Build 361543,246,719 - 43,246,850RGDNCBI36
Celera1522,350,710 - 22,350,841RGD
Cytogenetic Map15q21.1UniSTS
HuRef1522,283,488 - 22,283,619UniSTS
GeneMap99-GB4 RH Map15175.62UniSTS
NCBI RH Map15238.1UniSTS
D15S1477  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4q32-q35UniSTS
Cytogenetic Map5q11UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map10p12.1-p11.2UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map14q31-q32UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map16p13.13-p13.12UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map11q14.2UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map5q23UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map13q12.1UniSTS
Cytogenetic Map6p21.32UniSTS
Cytogenetic Map2q31UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map3p21.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map19pUniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map8q11.21UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map10q23.2UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map1q31.3UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map9p13UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map6q25.2-q25.3UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map17q24UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map17q22-q23UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map13q11UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map3p25-p24UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map3p12UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic MapXp11.2UniSTS
Cytogenetic Map11q13.1-q13.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map10q23.31UniSTS
Cytogenetic Map6p21.1-p12.2UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map1p35UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map14q11.1UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map9p22UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map9p22.1UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map20p11.23UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map8q12.1UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic MapXp11.22UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2p24UniSTS
Cytogenetic Map8q24.21UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map15q21-q22UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map7p14-p13UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map4q21.22UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q13.1-q13.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map10q25UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map15q21-q23UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map11q12UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map11q23.2UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map12q24.11UniSTS
Cytogenetic Map9q21.12UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map20p11.22-p11.1UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic MapXq21.1UniSTS
Cytogenetic Map10p11.21UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map22q12UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map12q14UniSTS
Cytogenetic Map11q23.1-q23.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map17qUniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map6p24.2UniSTS
D11S2560  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10p12.1-p11.2UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map8q21.13UniSTS
Cytogenetic Map18p11.22UniSTS
Cytogenetic Map9p13.3-p12UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map8p22-p21UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map12p13.33UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map5q23UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map3p21.2UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map2q12.1UniSTS
Cytogenetic Map9q13-q21UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map8q11.21UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map10q23.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map1p32UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map3q26.2-q27UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic MapXp11.2UniSTS
Cytogenetic Map20q11.2UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map18p11.32UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map14q13.2UniSTS
Cytogenetic Map8q12.1UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map8q24.21UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map1q23UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map7p14-p13UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map11q13.1-q13.3UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map6p24UniSTS
Cytogenetic Map10q25UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map9q31.1UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map3p26.1-p25.1UniSTS
Cytogenetic Map6q16.3UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic MapXq27.1UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map14q32.32UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map6q14.1UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map9q34.1UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map5q11UniSTS
D8S2279  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q22.12UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q22.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map17q24.2UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map7p14.1UniSTS
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Cytogenetic Map1p21UniSTS
Cytogenetic Map1q32.2-q41UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map5p15.1-p14.3UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map9p21UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map3p12.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map11p15UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map13q12-q14UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map3q28UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic MapXq22.2UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map7p15.1UniSTS
Cytogenetic Map2q37.2UniSTS
Cytogenetic Map18q22.3UniSTS
Cytogenetic Map14q32.13UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map16p13.1UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic Map20q13.2-q13.3UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map13q13.3UniSTS
Cytogenetic Map10p12.31UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map5q33.2UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map8q21.2UniSTS
Cytogenetic Map2q24.1UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map2q23.3UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map14q31UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map8p12-p11UniSTS
Cytogenetic Map18p11.2UniSTS
Cytogenetic Map7p11.1UniSTS
Cytogenetic Map1q31-q32UniSTS
Cytogenetic Map2q12UniSTS
Cytogenetic Map3p21.32UniSTS
Cytogenetic Map2p24.2UniSTS
Cytogenetic Map2q33-q34UniSTS
Cytogenetic Map6q24.1UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map17q11-q21UniSTS
Cytogenetic Map12q23UniSTS
Cytogenetic Map6p24-p22.3UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map7q31.1-q31.2UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map3p26.1-p25.1UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map6q16.3UniSTS
Cytogenetic Map17q24-q25UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic MapXq27.1UniSTS
Cytogenetic Map8q12.3UniSTS
Cytogenetic Map5q21.2UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map4q35.2UniSTS
Cytogenetic Map3p26.1UniSTS
Cytogenetic Map3p11.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map2q21.2UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map18p11.3UniSTS
Cytogenetic Map17q11.1UniSTS
Cytogenetic Map15q25.1UniSTS
Cytogenetic Map13q12.3UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map12q12-q13UniSTS
Cytogenetic Map12q14UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map2q32-q34UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map2p15-p13UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map19q13.33-q13.41UniSTS
Cytogenetic Map20p11UniSTS
Cytogenetic Map6q23-q24UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map2p13UniSTS
Cytogenetic Map13q11-q12UniSTS
Cytogenetic Map6p12.3-p11.2UniSTS
Cytogenetic Map6q16.1-q16.3UniSTS
Cytogenetic Map22q11UniSTS
Cytogenetic Map7q31.2UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map3q25.2UniSTS
Cytogenetic Map3p21.1-p14.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map3q23-q24UniSTS
Cytogenetic Map3q12UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map3q22.3UniSTS
Cytogenetic Map7q21.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map22q12-q13UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map1q24.3UniSTS
Cytogenetic Map9q33.1UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map2p16.2UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map4q21UniSTS
Cytogenetic Map13q12.2UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map1q23UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map11q13.3UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map11q12.1UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map8p21UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map4q32.3UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map10q26.1UniSTS
Cytogenetic Map9q32-q33.3UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q33-q34UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map13q32UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map5q22UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map3p26.3UniSTS
Cytogenetic Map2q11.1UniSTS
Cytogenetic Map21q11.2UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map12q24.23UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic MapXp22.31UniSTS
Cytogenetic MapXp21.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3q24UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map14q11.2-q12UniSTS
Cytogenetic Map3p24UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map8q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11cen-q12UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map11q22UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map4p13-p12UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map7p13-p11.1UniSTS
Cytogenetic Map9q31-q34UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic MapXp22.13UniSTS
Cytogenetic Map13q12.12UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1pUniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map2qUniSTS
Cytogenetic Map5q13.1UniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map5q14.3UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map2p24.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map9p21.1UniSTS
Cytogenetic Map9q34.2-q34.3UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 159 121 175 109 25 109 536 31 1144 15 435 75 263
Low 2250 2207 1545 513 1195 354 3718 2048 2585 393 1006 1500 172 1 1204 2434 4 2
Below cutoff 27 661 6 2 726 2 103 118 5 11 18 38 2 91 2

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001301168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001301169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001301170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001301171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001394048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_138356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006720742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011522174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011522175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011522176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011522177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011522178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017022710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017022711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047433284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047433285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047433286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054379123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054379124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054379125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054379126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054379127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC051619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK094391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK096267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK123658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK301625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK303749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC007586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC101601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC101603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC143601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC171730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM669861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX332806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX416415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX446025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN287519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000290894   ⟹   ENSP00000290894
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1545,167,214 - 45,201,175 (-)Ensembl
RefSeq Acc Id: ENST00000458022   ⟹   ENSP00000411530
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1545,167,713 - 45,181,207 (-)Ensembl
RefSeq Acc Id: ENST00000558294   ⟹   ENSP00000454034
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1545,167,834 - 45,175,326 (-)Ensembl
RefSeq Acc Id: ENST00000558685   ⟹   ENSP00000453827
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1545,171,846 - 45,175,269 (-)Ensembl
RefSeq Acc Id: ENST00000559566   ⟹   ENSP00000452726
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1545,171,594 - 45,178,260 (-)Ensembl
RefSeq Acc Id: ENST00000560471   ⟹   ENSP00000453260
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1545,170,666 - 45,187,955 (-)Ensembl
RefSeq Acc Id: ENST00000560540   ⟹   ENSP00000453370
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1545,167,214 - 45,187,956 (-)Ensembl
RefSeq Acc Id: ENST00000560734   ⟹   ENSP00000453168
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1545,167,251 - 45,187,952 (-)Ensembl
RefSeq Acc Id: ENST00000561091
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1545,174,223 - 45,187,459 (-)Ensembl
RefSeq Acc Id: ENST00000561239   ⟹   ENSP00000453676
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1545,170,208 - 45,173,658 (-)Ensembl
RefSeq Acc Id: ENST00000561278   ⟹   ENSP00000453986
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1545,175,380 - 45,201,116 (-)Ensembl
RefSeq Acc Id: ENST00000690270   ⟹   ENSP00000508579
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1545,167,214 - 45,187,966 (-)Ensembl
RefSeq Acc Id: NM_001301168   ⟹   NP_001288097
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,187,966 (-)NCBI
CHM1_11545,578,088 - 45,598,835 (-)NCBI
T2T-CHM13v2.01542,975,223 - 42,995,973 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001301169   ⟹   NP_001288098
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,187,966 (-)NCBI
CHM1_11545,578,088 - 45,598,835 (-)NCBI
T2T-CHM13v2.01542,975,223 - 42,995,973 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001301170   ⟹   NP_001288099
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,187,966 (-)NCBI
CHM1_11545,578,088 - 45,598,835 (-)NCBI
T2T-CHM13v2.01542,975,223 - 42,995,973 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001301171   ⟹   NP_001288100
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,181,207 (-)NCBI
CHM1_11545,578,088 - 45,592,077 (-)NCBI
T2T-CHM13v2.01542,975,223 - 42,989,214 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001394037   ⟹   NP_001380966
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,187,966 (-)NCBI
T2T-CHM13v2.01542,975,223 - 42,995,973 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001394038   ⟹   NP_001380967
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,187,966 (-)NCBI
T2T-CHM13v2.01542,975,223 - 42,995,973 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001394039   ⟹   NP_001380968
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,187,966 (-)NCBI
T2T-CHM13v2.01542,975,223 - 42,995,973 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001394040   ⟹   NP_001380969
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,187,966 (-)NCBI
T2T-CHM13v2.01542,975,223 - 42,995,973 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001394041   ⟹   NP_001380970
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,201,116 (-)NCBI
T2T-CHM13v2.01542,975,223 - 43,009,099 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001394042   ⟹   NP_001380971
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,187,966 (-)NCBI
T2T-CHM13v2.01542,975,223 - 42,995,973 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001394043   ⟹   NP_001380972
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,201,116 (-)NCBI
T2T-CHM13v2.01542,975,223 - 43,009,099 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001394044   ⟹   NP_001380973
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,174,195 - 45,187,966 (-)NCBI
T2T-CHM13v2.01542,982,204 - 42,995,973 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001394045   ⟹   NP_001380974
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,201,116 (-)NCBI
T2T-CHM13v2.01542,975,223 - 43,009,099 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001394046   ⟹   NP_001380975
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,201,116 (-)NCBI
T2T-CHM13v2.01542,975,223 - 43,009,099 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001394047   ⟹   NP_001380976
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,201,116 (-)NCBI
T2T-CHM13v2.01542,975,223 - 43,009,099 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001394048   ⟹   NP_001380977
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,201,116 (-)NCBI
T2T-CHM13v2.01542,975,223 - 43,009,099 (-)NCBI
Sequence:
RefSeq Acc Id: NM_138356   ⟹   NP_612365
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,201,116 (-)NCBI
GRCh371545,459,412 - 45,493,373 (-)RGD
Build 361543,246,704 - 43,280,665 (-)NCBI Archive
Celera1522,350,695 - 22,384,650 (-)RGD
HuRef1522,283,482 - 22,317,406 (-)ENTREZGENE
CHM1_11545,578,088 - 45,611,982 (-)NCBI
T2T-CHM13v2.01542,975,223 - 43,009,099 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011522178   ⟹   XP_011520480
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,170,218 - 45,187,966 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017022710   ⟹   XP_016878199
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,187,966 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047433284   ⟹   XP_047289240
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,170,218 - 45,187,966 (-)NCBI
RefSeq Acc Id: XM_047433285   ⟹   XP_047289241
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,201,116 (-)NCBI
RefSeq Acc Id: XM_047433286   ⟹   XP_047289242
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,167,214 - 45,201,116 (-)NCBI
RefSeq Acc Id: XM_054379123   ⟹   XP_054235098
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01542,978,362 - 42,995,973 (-)NCBI
RefSeq Acc Id: XM_054379124   ⟹   XP_054235099
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01542,975,223 - 43,009,099 (-)NCBI
RefSeq Acc Id: XM_054379125   ⟹   XP_054235100
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01542,975,223 - 43,009,099 (-)NCBI
RefSeq Acc Id: XM_054379126   ⟹   XP_054235101
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01542,975,223 - 42,995,973 (-)NCBI
RefSeq Acc Id: XM_054379127   ⟹   XP_054235102
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01542,978,362 - 42,995,973 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001288097 (Get FASTA)   NCBI Sequence Viewer  
  NP_001288098 (Get FASTA)   NCBI Sequence Viewer  
  NP_001288099 (Get FASTA)   NCBI Sequence Viewer  
  NP_001288100 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380966 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380967 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380968 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380969 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380970 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380971 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380972 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380973 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380974 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380975 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380976 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380977 (Get FASTA)   NCBI Sequence Viewer  
  NP_612365 (Get FASTA)   NCBI Sequence Viewer  
  XP_011520480 (Get FASTA)   NCBI Sequence Viewer  
  XP_016878199 (Get FASTA)   NCBI Sequence Viewer  
  XP_047289240 (Get FASTA)   NCBI Sequence Viewer  
  XP_047289241 (Get FASTA)   NCBI Sequence Viewer  
  XP_047289242 (Get FASTA)   NCBI Sequence Viewer  
  XP_054235098 (Get FASTA)   NCBI Sequence Viewer  
  XP_054235099 (Get FASTA)   NCBI Sequence Viewer  
  XP_054235100 (Get FASTA)   NCBI Sequence Viewer  
  XP_054235101 (Get FASTA)   NCBI Sequence Viewer  
  XP_054235102 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH07586 (Get FASTA)   NCBI Sequence Viewer  
  AAI01602 (Get FASTA)   NCBI Sequence Viewer  
  AAI01604 (Get FASTA)   NCBI Sequence Viewer  
  AAI43602 (Get FASTA)   NCBI Sequence Viewer  
  AAI71730 (Get FASTA)   NCBI Sequence Viewer  
  BAC04345 (Get FASTA)   NCBI Sequence Viewer  
  BAG53243 (Get FASTA)   NCBI Sequence Viewer  
  BAG63110 (Get FASTA)   NCBI Sequence Viewer  
  BAG64721 (Get FASTA)   NCBI Sequence Viewer  
  EAW77298 (Get FASTA)   NCBI Sequence Viewer  
  EAW77299 (Get FASTA)   NCBI Sequence Viewer  
  EAW77300 (Get FASTA)   NCBI Sequence Viewer  
  EAW77301 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000290894
  ENSP00000290894.8
  ENSP00000411530
  ENSP00000411530.2
  ENSP00000452726.1
  ENSP00000453168
  ENSP00000453168.1
  ENSP00000453260
  ENSP00000453260.1
  ENSP00000453370
  ENSP00000453370.1
  ENSP00000453676.2
  ENSP00000453827.1
  ENSP00000453986.1
  ENSP00000454034.1
  ENSP00000508579
  ENSP00000508579.1
GenBank Protein Q7M4L6 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_612365   ⟸   NM_138356
- Peptide Label: isoform b
- UniProtKB: Q7M4L6 (UniProtKB/Swiss-Prot),   Q96IE8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001288099   ⟸   NM_001301170
- Peptide Label: isoform d
- UniProtKB: H0YLD8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001288098   ⟸   NM_001301169
- Peptide Label: isoform c
- UniProtKB: H0YLW6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001288097   ⟸   NM_001301168
- Peptide Label: isoform a
- Sequence:
RefSeq Acc Id: NP_001288100   ⟸   NM_001301171
- Peptide Label: isoform e
- UniProtKB: F8W6V4 (UniProtKB/TrEMBL),   B4DWP8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011520480   ⟸   XM_011522178
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_016878199   ⟸   XM_017022710
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: ENSP00000454034   ⟸   ENST00000558294
RefSeq Acc Id: ENSP00000453827   ⟸   ENST00000558685
RefSeq Acc Id: ENSP00000452726   ⟸   ENST00000559566
RefSeq Acc Id: ENSP00000453370   ⟸   ENST00000560540
RefSeq Acc Id: ENSP00000453260   ⟸   ENST00000560471
RefSeq Acc Id: ENSP00000453168   ⟸   ENST00000560734
RefSeq Acc Id: ENSP00000453986   ⟸   ENST00000561278
RefSeq Acc Id: ENSP00000453676   ⟸   ENST00000561239
RefSeq Acc Id: ENSP00000411530   ⟸   ENST00000458022
RefSeq Acc Id: ENSP00000290894   ⟸   ENST00000290894
RefSeq Acc Id: NP_001380977   ⟸   NM_001394048
- Peptide Label: isoform q
RefSeq Acc Id: NP_001380976   ⟸   NM_001394047
- Peptide Label: isoform p
RefSeq Acc Id: NP_001380975   ⟸   NM_001394046
- Peptide Label: isoform o
RefSeq Acc Id: NP_001380974   ⟸   NM_001394045
- Peptide Label: isoform n
RefSeq Acc Id: NP_001380972   ⟸   NM_001394043
- Peptide Label: isoform l
RefSeq Acc Id: NP_001380970   ⟸   NM_001394041
- Peptide Label: isoform j
- UniProtKB: B3KTY1 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001380971   ⟸   NM_001394042
- Peptide Label: isoform k
RefSeq Acc Id: NP_001380968   ⟸   NM_001394039
- Peptide Label: isoform h
RefSeq Acc Id: NP_001380969   ⟸   NM_001394040
- Peptide Label: isoform i
RefSeq Acc Id: NP_001380967   ⟸   NM_001394038
- Peptide Label: isoform g
- UniProtKB: H0YLM1 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001380966   ⟸   NM_001394037
- Peptide Label: isoform f
- UniProtKB: A0A8I5QJ71 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001380973   ⟸   NM_001394044
- Peptide Label: isoform m
RefSeq Acc Id: ENSP00000508579   ⟸   ENST00000690270
RefSeq Acc Id: XP_047289242   ⟸   XM_047433286
- Peptide Label: isoform X3
RefSeq Acc Id: XP_047289241   ⟸   XM_047433285
- Peptide Label: isoform X2
RefSeq Acc Id: XP_047289240   ⟸   XM_047433284
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054235100   ⟸   XM_054379125
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054235099   ⟸   XM_054379124
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054235101   ⟸   XM_054379126
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054235102   ⟸   XM_054379127
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054235098   ⟸   XM_054379123
- Peptide Label: isoform X1
Protein Domains
SH2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7M4L6-F1-model_v2 AlphaFold Q7M4L6 1-423 view protein structure

Promoters
RGD ID:6792583
Promoter ID:HG_KWN:21275
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   Jurkat,   K562,   Lymphoblastoid
Transcripts:UC001ZUV.1,   UC001ZUW.1,   UC001ZUX.1,   UC001ZUZ.1,   UC010BEF.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361543,267,431 - 43,268,132 (-)MPROMDB
RGD ID:6810826
Promoter ID:HG_ACW:25987
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562,   Lymphoblastoid
Transcripts:SHF.LAPR07-UNSPLICED
Position:
Human AssemblyChrPosition (strand)Source
Build 361543,278,161 - 43,278,661 (-)MPROMDB
RGD ID:6792582
Promoter ID:HG_KWN:21276
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000318390,   ENST00000361989,   OTTHUMT00000254141
Position:
Human AssemblyChrPosition (strand)Source
Build 361543,280,176 - 43,281,222 (-)MPROMDB
RGD ID:7229369
Promoter ID:EPDNEW_H20429
Type:multiple initiation site
Name:SHF_1
Description:Src homology 2 domain containing F
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381545,178,330 - 45,178,390EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:25116 AgrOrtholog
COSMIC SHF COSMIC
Ensembl Genes ENSG00000138606 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000290894 ENTREZGENE
  ENST00000290894.12 UniProtKB/Swiss-Prot
  ENST00000458022 ENTREZGENE
  ENST00000458022.6 UniProtKB/TrEMBL
  ENST00000558294.1 UniProtKB/TrEMBL
  ENST00000558685.1 UniProtKB/TrEMBL
  ENST00000559566.5 UniProtKB/TrEMBL
  ENST00000560471 ENTREZGENE
  ENST00000560471.5 UniProtKB/TrEMBL
  ENST00000560540 ENTREZGENE
  ENST00000560540.5 UniProtKB/TrEMBL
  ENST00000560734 ENTREZGENE
  ENST00000560734.5 UniProtKB/TrEMBL
  ENST00000561239.6 UniProtKB/TrEMBL
  ENST00000561278.1 UniProtKB/TrEMBL
  ENST00000690270 ENTREZGENE
  ENST00000690270.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.505.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000138606 GTEx
HGNC ID HGNC:25116 ENTREZGENE
Human Proteome Map SHF Human Proteome Map
InterPro SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SHF_SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:90525 UniProtKB/TrEMBL
NCBI Gene 90525 ENTREZGENE
OMIM 617313 OMIM
PANTHER HEAVYWEIGHT, ISOFORM A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR15127:SF28 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA142670920 PharmGKB
PRINTS SH2DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Nucleotidylyl transferase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF55550 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8I5QJ71 ENTREZGENE, UniProtKB/TrEMBL
  B3KTY1 ENTREZGENE, UniProtKB/TrEMBL
  B4DWP8 ENTREZGENE, UniProtKB/TrEMBL
  B4E1A9_HUMAN UniProtKB/TrEMBL
  B7ZL62_HUMAN UniProtKB/TrEMBL
  B7ZVW1_HUMAN UniProtKB/TrEMBL
  F8W6V4 ENTREZGENE, UniProtKB/TrEMBL
  H0YKA8_HUMAN UniProtKB/TrEMBL
  H0YLD8 ENTREZGENE, UniProtKB/TrEMBL
  H0YLM1 ENTREZGENE, UniProtKB/TrEMBL
  H0YLW6 ENTREZGENE, UniProtKB/TrEMBL
  H0YMN4_HUMAN UniProtKB/TrEMBL
  H0YN16_HUMAN UniProtKB/TrEMBL
  H0YNF2_HUMAN UniProtKB/TrEMBL
  H0YNJ2_HUMAN UniProtKB/TrEMBL
  Q7M4L6 ENTREZGENE
  Q8N9I8_HUMAN UniProtKB/TrEMBL
  Q96IE8 ENTREZGENE
  SHF_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary Q96IE8 UniProtKB/Swiss-Prot