Zdhhc17 (zinc finger, DHHC domain containing 17) - Rat Genome Database

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Gene: Zdhhc17 (zinc finger, DHHC domain containing 17) Mus musculus
Analyze
Symbol: Zdhhc17
Name: zinc finger, DHHC domain containing 17
RGD ID: 1557918
MGI Page MGI
Description: Enables palmitoyltransferase activity and signaling receptor binding activity. Involved in axonogenesis; regulation of ERK1 and ERK2 cascade; and regulation of neurotrophin TRK receptor signaling pathway. Located in Golgi apparatus. Is expressed in several structures, including early conceptus; heart; and oocyte. Used to study Huntington's disease. Orthologous to human ZDHHC17 (zinc finger DHHC-type palmitoyltransferase 17).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: A230053P19Rik; acyltransferase ZDHHC17; acyltransferase ZDHHC7; BB187739; D130071N24Rik; DHHC domain-containing cysteine-rich protein 17; DHHC-17; Hip; Hip14; huntingtin interacting protein 14; huntingtin-interacting protein 14; KIAA0946; palmitoyltransferase ZDHHC17; zinc finger DHHC domain-containing protein 17
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm18813  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910110,777,640 - 110,848,587 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10110,777,641 - 110,846,001 (-)EnsemblGRCm39 Ensembl
GRCm3810110,941,779 - 111,010,066 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10110,941,780 - 111,010,140 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710110,378,835 - 110,447,122 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610110,347,147 - 110,414,118 (-)NCBIMGSCv36mm8
Celera10112,871,081 - 112,938,382 (-)NCBICelera
Cytogenetic Map10D1NCBI
cM Map1057.86NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. Identification of PSD-95 palmitoylating enzymes. Fukata M, etal., Neuron 2004 Dec 16;44(6):987-96.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, etal., DNA Res 2003 Feb 28;10(1):35-48.
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11544199   PMID:12393793   PMID:12466305   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15489334  
PMID:15489887   PMID:15603740   PMID:15618518   PMID:16141072   PMID:16141073   PMID:16699508   PMID:18287559   PMID:18596047   PMID:18794299   PMID:20412781   PMID:21636527   PMID:21705657  
PMID:21775500   PMID:21873635   PMID:22649491   PMID:23077216   PMID:24001771   PMID:24277827   PMID:24376823   PMID:25253725   PMID:25271157   PMID:25478910   PMID:26198635   PMID:26232532  
PMID:27911442   PMID:27927242   PMID:28167757   PMID:30550785   PMID:30846936   PMID:32554809   PMID:33207199   PMID:36442513   PMID:37064897  


Genomics

Comparative Map Data
Zdhhc17
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910110,777,640 - 110,848,587 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10110,777,641 - 110,846,001 (-)EnsemblGRCm39 Ensembl
GRCm3810110,941,779 - 111,010,066 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10110,941,780 - 111,010,140 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710110,378,835 - 110,447,122 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610110,347,147 - 110,414,118 (-)NCBIMGSCv36mm8
Celera10112,871,081 - 112,938,382 (-)NCBICelera
Cytogenetic Map10D1NCBI
cM Map1057.86NCBI
ZDHHC17
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381276,764,115 - 76,853,701 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1276,764,103 - 76,853,696 (+)EnsemblGRCh38hg38GRCh38
GRCh371277,157,895 - 77,247,481 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361275,681,985 - 75,771,605 (+)NCBINCBI36Build 36hg18NCBI36
Build 341275,659,835 - 75,749,942NCBI
Celera1276,823,537 - 76,912,998 (+)NCBICelera
Cytogenetic Map12q21.2NCBI
HuRef1274,210,859 - 74,300,399 (+)NCBIHuRef
CHM1_11277,123,422 - 77,213,014 (+)NCBICHM1_1
T2T-CHM13v2.01276,742,025 - 76,831,585 (+)NCBIT2T-CHM13v2.0
Zdhhc17
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8748,256,269 - 48,320,000 (-)NCBIGRCr8
mRatBN7.2746,369,963 - 46,433,691 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl746,369,988 - 46,433,764 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx748,271,200 - 48,333,114 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0750,474,329 - 50,536,243 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0750,252,059 - 50,313,974 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0753,651,529 - 53,715,007 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl753,653,116 - 53,714,879 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0753,662,715 - 53,726,527 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4749,933,342 - 49,995,838 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera743,177,128 - 43,238,754 (-)NCBICelera
Cytogenetic Map7q22NCBI
Zdhhc17
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540515,915,756 - 15,997,777 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540515,915,756 - 15,997,777 (+)NCBIChiLan1.0ChiLan1.0
ZDHHC17
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21084,801,702 - 84,891,322 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11284,798,140 - 84,887,713 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01274,281,716 - 74,371,885 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11277,132,723 - 77,222,514 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1277,132,723 - 77,222,509 (+)Ensemblpanpan1.1panPan2
ZDHHC17
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11519,631,719 - 19,727,089 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1519,499,445 - 19,724,341 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1520,122,502 - 20,265,878 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01519,977,362 - 20,120,795 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1519,977,325 - 20,066,267 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11519,577,052 - 19,720,418 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01519,634,946 - 19,778,238 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01519,763,733 - 19,907,136 (+)NCBIUU_Cfam_GSD_1.0
Zdhhc17
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494540,675,912 - 40,768,530 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365684,959,790 - 5,052,245 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365684,959,796 - 5,052,254 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZDHHC17
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl5104,300,876 - 104,394,260 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.15104,300,869 - 104,394,255 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.25109,481,712 - 109,553,113 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZDHHC17
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11172,341,708 - 72,431,178 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1172,342,335 - 72,431,675 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037173,112,637 - 173,202,071 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zdhhc17
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475021,225,768 - 21,308,927 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475021,224,049 - 21,309,089 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Zdhhc17
2781 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:864
Count of miRNA genes:505
Interacting mature miRNAs:605
Transcripts:ENSMUST00000041723, ENSMUST00000099285
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357740Obsty3_mobesity 3 (mouse)Not determined108235478116190980Mouse
1302067Scc9_mcolon tumor susceptibility 9 (mouse)Not determined1018259333125575232Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1018875748129635869Mouse
1558757Eae34_mexperimental allergic encephalomyelitis susceptibility 34 (mouse)Not determined1021408154114217230Mouse
26884426Cvht1_mcranial vault height 1, 5 week (mouse)1024675898121035905Mouse
27095911Pglq15_mpelvic girdle length QTL 15, 16 week (mouse)1039175996129635869Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039175996129635869Mouse
26884411Bzwq8_mbi-zygomatic width QTL 8, 10 week (mouse)1044876096115935905Mouse
26884407Bzwq14_mbi-zygomatic width QTL 14, 16 wee (mouse)1045476096120635905Mouse
26884450Sklq15_mskull length QTL 15, 16 week (mouse)1059335822122335905Mouse
13208560Wght9_mweight 9 (mouse)1059835822120835905Mouse
26884424Zlq9_mzygomatic length QTL 9, 16 week (mouse)1063935779115935905Mouse
26884447Sklq9_mskull length QTL 9, 10 week (mouse)1067335830111735905Mouse
26884430Zlq5_mzygomatic length QTL 5, 10 week (mouse)1067835830124835905Mouse
26884405Huml2_mhumerus length 2, 5 week (mouse)1069735830130430862Mouse
11353832Pcholq4_mplasma cholesterol QTL 4 (mouse)1073987216125515907Mouse
11353843Gluq1_mblood glucose QTL 1 (mouse)1073987216125515907Mouse
11251717Siim1_mstress induced immobility 1 (mouse)1078381268112381268Mouse
14747004Mancz8_mmandible centroid size 8 (mouse)1082078412116078412Mouse
11059554Lmr32e_mleishmaniasis resistance 32e (mouse)1082309418116309657Mouse
11059555Lmr32f_mleishmaniasis resistance 32f (mouse)1082309418116309657Mouse
11059550Lmr32a_mleishmaniasis resistance 32a (mouse)1082309418116309657Mouse
11059551Lmr32b_mleishmaniasis resistance 32b (mouse)1082309418116309657Mouse
11059553Lmr32d_mleishmaniasis resistance 32d (mouse)1082309418116309657Mouse
1301165Lith7_mlithogenic gene 7 (mouse)Not determined1082309418116309657Mouse
10043881Adip24_madiposity 24 (mouse)Not determined1082392803116392952Mouse
4141054mwfh_mmodifier of white forlock hypopigmentation (mouse)Not determined83017003117017136Mouse
1357594Estoq3_membryo survival total QTL 3 (mouse)Not determined1084079650122041528Mouse
1357622Espq3_membryo survival preimplantation QTL 3 (mouse)Not determined1084079650122041528Mouse
4141479W10q8_mweight 10 weeks QTL 8 (mouse)Not determined84079650122041528Mouse
4142496W6q8_mweight 6 weeks QTL 8 (mouse)Not determined84079650122041528Mouse
4141387Lgaq5_mlate growth adjusted QTL 5 (mouse)Not determined84079650122041528Mouse
4142365Egq9_mearly growth QTL 9 (mouse)Not determined84079650122041528Mouse
1357779Tesq3_mtestis weight QTL 3 (mouse)Not determined1084079650122041528Mouse
1357638Cia29_mcollagen induced arthritis 29 (mouse)Not determined1085454982118497353Mouse
1300797Sluc22_msusceptibility to lung cancer 22 (mouse)Not determined1086713608120713756Mouse
1300908Insq4_minsulin QTL 4 (mouse)Not determined1086909085120909229Mouse
1301520Uvbi1_mUVB induced immunosuppression 1 (mouse)Not determined1086909085120909229Mouse
1300921Skl4_mskeletal size (tail length) 4 (mouse)Not determined1088088254122088391Mouse
4142386Tgq20_mtriglyceride QTL 20 (mouse)Not determined88836456122836456Mouse
1301758Fcsa3_mfemoral cross-sectional area 3 (mouse)Not determined1089927651123927754Mouse
11039516Ltpr5_mLeishmania tropica response 5 (mouse)1090506901125575232Mouse
13208554Lgth11_mbody length 11 (mouse)1090835862120835905Mouse
4142074Tmevp2_mTheiler's murine encephalomyelitis virus persistence 2 (mouse)Not determined92729941111568319Mouse
1357544Vtbt10_mvertebral trabecular bone trait 10 (mouse)Not determined1097217101130530862Mouse
4142461Bmd25_mbone mineral density 25 (mouse)Not determined1097217101130530862Mouse
11533919Mvb4_mmodifier of vibrator 4 (mouse)397217101130530862Mouse
11533921Mvb2_mmodifier of vibrator 2 (mouse)1097217101130530862Mouse
12880413V125Dq9_mvitamin D active form serum level QTL 9 (mouse)1097535905130530862Mouse
4141402T2dm1sa_mtype 2 diabetes mellitus 1 in SMXA RI mice (mouse)Not determined97758644130530862Mouse
11040593Lmr5e_mleishmaniasis resistance 5e (mouse)1099220635130530862Mouse
11040595Lmr5c_mleishmaniasis resistance 5c (mouse)1099220635130530862Mouse
11040597Lmr5a_mleishmaniasis resistance 5a (mouse)1099220635130530862Mouse
11059552Lmr32c_mleishmaniasis resistance 32c (mouse)1099309418116220862Mouse
11059544Lmr32_mleishmaniasis resistance 32 (mouse)1099309418116220862Mouse
1357744Cfbw4_mcystic fibrosis body weight 4 (mouse)Not determined10100986516130530862Mouse
1301968Estq4_mestradiol regulated response QTL 4 (mouse)Not determined10100986516130530862Mouse
1301901Im5_mimmunoregulatory 5 (mouse)Not determined10101497164130530862Mouse
4141361Cfmq3_mcystic fibrosis modifier QTL 3 (mouse)Not determined10101497164130530862Mouse
26884388Skwq7_mskull length QTL 7, 10 week (mouse)10101735861113735905Mouse
1300678Leg2_mlongevity extending gene 2 (mouse)Not determined10102506908130530862Mouse
27226725Tibw1_mtibia width 1, proximal, 5 week (mouse)10102735861123235905Mouse
1301895Exq1_mexploratory and excitability QTL 1 (mouse)Not determined10102847852130530862Mouse
14696727Kidrq2_mkidney weight, right QTL 2 (mouse)10102902508130530862Mouse
4141007Obrq10_mobesity resistance QTL 10 (mouse)Not determined103243727130530862Mouse
4141487Tgq21_mtriglyceride QTL 21 (mouse)Not determined104110021130530862Mouse
14746996Manh69_mmandible shape 69 (mouse)10104763638130530862Mouse
1302200Sle12_msystematic lupus erythematosus susceptibility 12 (mouse)Not determined10105041304130530862Mouse
1357482Nhdlq4_mnon-HDL QTL 4 (mouse)Not determined10105041304130530862Mouse
1300679Nociq2_mnociceptive sensitivity inflammatory QTL 2 (mouse)Not determined10105041304130530862Mouse
4141269Ipng2_mimprinted postnatal growth 2 (mouse)Not determined105088254118497353Mouse
11040594Lmr5f_mleishmaniasis resistance 5f (mouse)10105179713130530862Mouse
11040596Lmr5d_mleishmaniasis resistance 5d (mouse)10105179713130530862Mouse
11040598Lmr5b_mleishmaniasis resistance 5b (mouse)10105179713130530862Mouse
4142089Obrq9_mobesity resistance QTL 9 (mouse)Not determined108515907130530862Mouse
4141153Ltgq2_mliver triglyceride QTL 2 (mouse)Not determined108515907130530862Mouse
11041664Lmr25_mleishmaniasis resistance 25 (mouse)10108575094130530862Mouse
11039496Ltpr5b_mLeishmania tropica response 5b (mouse)10108575094130530862Mouse
11049570Lmr25b_mleishmaniasis resistance 25b (mouse)10108575094130530862Mouse
11049563Lmr25a_mleishmaniasis resistance 25a (mouse)10108575094130530862Mouse
27226722Tibw7_mtibia width 7, proximal, 16 week (mouse)10108635861125435869Mouse
27095902Scvln11_msacral vertebrae length 2, 10 week (mouse)10110035861125435869Mouse
11353822Insq12_minsulin QTL 12 (mouse)10110453347125515907Mouse
11353823Homaq2_mhomeostatic model assessment QTL 2 (mouse)10110453347125515907Mouse

Markers in Region
BB187739  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810110,962,180 - 110,962,327UniSTSGRCm38
MGSCv3710110,399,236 - 110,399,383UniSTSGRCm37
Celera10112,890,796 - 112,890,943UniSTS
Cytogenetic Map10D1UniSTS
Whitehead/MRC_RH101195.01UniSTS
UniSTS:236456  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810110,942,085 - 110,942,303UniSTSGRCm38
MGSCv3710110,379,141 - 110,379,359UniSTSGRCm37
Celera10112,871,387 - 112,871,605UniSTS
Cytogenetic Map10D1UniSTS
D7Rat210  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810111,008,224 - 111,008,360UniSTSGRCm38
MGSCv3710110,445,280 - 110,445,416UniSTSGRCm37
Celera10112,936,545 - 112,936,681UniSTS
Cytogenetic Map10D1UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001359622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_172554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC153499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK039575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK046891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW911453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC058772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC080664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC117788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC117789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE955669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ560505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000041723   ⟹   ENSMUSP00000043279
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10110,777,641 - 110,845,927 (-)Ensembl
GRCm38.p6 Ensembl10110,941,780 - 111,010,066 (-)Ensembl
RefSeq Acc Id: ENSMUST00000099285
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10110,797,864 - 110,845,864 (-)Ensembl
GRCm38.p6 Ensembl10110,962,003 - 111,010,003 (-)Ensembl
RefSeq Acc Id: ENSMUST00000217698
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10110,777,643 - 110,846,001 (-)Ensembl
GRCm38.p6 Ensembl10110,941,782 - 111,010,140 (-)Ensembl
RefSeq Acc Id: ENSMUST00000217793
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10110,809,563 - 110,845,859 (-)Ensembl
GRCm38.p6 Ensembl10110,973,702 - 111,009,998 (-)Ensembl
RefSeq Acc Id: ENSMUST00000217982
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10110,781,871 - 110,783,558 (-)Ensembl
GRCm38.p6 Ensembl10110,946,010 - 110,947,697 (-)Ensembl
RefSeq Acc Id: ENSMUST00000218895   ⟹   ENSMUSP00000151491
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10110,790,925 - 110,803,707 (-)Ensembl
GRCm38.p6 Ensembl10110,955,064 - 110,967,846 (-)Ensembl
RefSeq Acc Id: ENSMUST00000218972
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10110,790,688 - 110,796,944 (-)Ensembl
GRCm38.p6 Ensembl10110,954,827 - 110,961,083 (-)Ensembl
RefSeq Acc Id: ENSMUST00000218981
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10110,809,986 - 110,845,838 (-)Ensembl
GRCm38.p6 Ensembl10110,974,125 - 111,009,977 (-)Ensembl
RefSeq Acc Id: ENSMUST00000219307   ⟹   ENSMUSP00000151330
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10110,803,654 - 110,841,615 (-)Ensembl
GRCm38.p6 Ensembl10110,967,793 - 111,005,754 (-)Ensembl
RefSeq Acc Id: ENSMUST00000220247   ⟹   ENSMUSP00000151754
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10110,778,442 - 110,845,856 (-)Ensembl
GRCm38.p6 Ensembl10110,942,581 - 111,009,995 (-)Ensembl
RefSeq Acc Id: NM_001359622   ⟹   NP_001346551
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910110,777,640 - 110,845,870 (-)NCBI
GRCm3810110,941,779 - 111,010,009 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359624   ⟹   NP_001346553
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910110,777,640 - 110,845,927 (-)NCBI
GRCm3810110,941,779 - 111,010,066 (-)NCBI
Sequence:
RefSeq Acc Id: NM_172554   ⟹   NP_766142
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910110,777,640 - 110,845,927 (-)NCBI
GRCm3810110,941,779 - 111,010,066 (-)ENTREZGENE
MGSCv3710110,378,835 - 110,447,122 (-)RGD
Celera10112,871,081 - 112,938,382 (-)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030245125   ⟹   XP_030100985
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910110,777,640 - 110,845,889 (-)NCBI
GRCm3810110,942,578 - 111,010,028 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036155819   ⟹   XP_036011712
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910110,777,640 - 110,848,587 (-)NCBI
Sequence:
RefSeq Acc Id: NP_766142   ⟸   NM_172554
- Peptide Label: isoform 1
- UniProtKB: Q8BYQ2 (UniProtKB/Swiss-Prot),   Q8BJ08 (UniProtKB/Swiss-Prot),   Q8BYQ6 (UniProtKB/Swiss-Prot),   Q80TN5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001346553   ⟸   NM_001359624
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001346551   ⟸   NM_001359622
- Peptide Label: isoform 2
- UniProtKB: Q0VFY6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030100985   ⟸   XM_030245125
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000151491   ⟸   ENSMUST00000218895
RefSeq Acc Id: ENSMUSP00000151330   ⟸   ENSMUST00000219307
RefSeq Acc Id: ENSMUSP00000043279   ⟸   ENSMUST00000041723
RefSeq Acc Id: ENSMUSP00000151754   ⟸   ENSMUST00000220247
RefSeq Acc Id: XP_036011712   ⟸   XM_036155819
- Peptide Label: isoform X1
Protein Domains
DHHC   Palmitoyltransferase DHHC

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q80TN5-F1-model_v2 AlphaFold Q80TN5 1-632 view protein structure

Promoters
RGD ID:6820113
Promoter ID:MM_KWN:5600
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Lung
Transcripts:ENSMUST00000104906
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3610110,379,401 - 110,380,102 (-)MPROMDB
RGD ID:6819606
Promoter ID:MM_KWN:5602
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_172554,   UC007GZV.1,   UC007GZW.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3610110,446,826 - 110,448,042 (-)MPROMDB
RGD ID:8673236
Promoter ID:EPDNEW_M14648
Type:multiple initiation site
Name:Zdhhc17_1
Description:Mus musculus zinc finger, DHHC domain containing 17 , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3810111,010,009 - 111,010,069EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2445110 AgrOrtholog
Ensembl Genes ENSMUSG00000035798 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000041723 ENTREZGENE
  ENSMUST00000041723.15 UniProtKB/Swiss-Prot
  ENSMUST00000218895.2 UniProtKB/TrEMBL
  ENSMUST00000219307.2 UniProtKB/TrEMBL
  ENSMUST00000220247.2 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Palmitoyltrfase_DHHC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:320150 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:2445110 ENTREZGENE
NCBI Gene 320150 ENTREZGENE
PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR24161:SF18 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ank UniProtKB/TrEMBL
  Ank_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ank_4 UniProtKB/TrEMBL
  DHHC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Zdhhc17 PhenoGen
PRINTS ANKYRIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DHHC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ANK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1W2P6S3_MOUSE UniProtKB/TrEMBL
  A0A1W2P760_MOUSE UniProtKB/TrEMBL
  A0A1W2P7M2_MOUSE UniProtKB/TrEMBL
  Q0VFY6 ENTREZGENE, UniProtKB/TrEMBL
  Q3TRB3_MOUSE UniProtKB/TrEMBL
  Q80TN5 ENTREZGENE
  Q8BIE0_MOUSE UniProtKB/TrEMBL
  Q8BIT5_MOUSE UniProtKB/TrEMBL
  Q8BJ08 ENTREZGENE
  Q8BYQ2 ENTREZGENE
  Q8BYQ6 ENTREZGENE
  ZDH17_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q8BJ08 UniProtKB/Swiss-Prot
  Q8BYQ2 UniProtKB/Swiss-Prot
  Q8BYQ6 UniProtKB/Swiss-Prot