Stt3a (STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)) - Rat Genome Database

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Gene: Stt3a (STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)) Mus musculus
Analyze
Symbol: Stt3a
Name: STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
RGD ID: 1557396
MGI Page MGI
Description: Predicted to enable dolichyl-diphosphooligosaccharide-protein glycotransferase activity. Predicted to be involved in co-translational protein modification; post-translational protein modification; and protein N-linked glycosylation via asparagine. Located in membrane. Is expressed in several structures, including craniocervical region bone and thoracic segment skeleton. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Iw. Orthologous to human STT3A (STT3 oligosaccharyltransferase complex catalytic subunit A).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AA408947; B5; BB081708; dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A; integral membrane protein 1; intergral membrane protein 1; Itm; Itm1; oligosaccharyl transferase subunit STT3A; STT3-A
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39936,640,640 - 36,678,918 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl936,640,640 - 36,678,975 (-)EnsemblGRCm39 Ensembl
GRCm38936,729,344 - 36,767,622 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl936,729,344 - 36,767,679 (-)EnsemblGRCm38mm10GRCm38
MGSCv37936,539,998 - 36,575,163 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36936,481,044 - 36,517,312 (-)NCBIMGSCv36mm8
Celera933,935,517 - 33,969,930 (-)NCBICelera
Cytogenetic Map9A4NCBI
cM Map920.67NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Molecular cloning of a highly conserved mouse and human integral membrane protein (Itm1) and genetic mapping to mouse chromosome 9. Hong G, etal., Genomics 1996 Feb 1;31(3):295-300.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8634329   PMID:8889548   PMID:9507200   PMID:10095055   PMID:10199918   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12887896  
PMID:12904583   PMID:14576154   PMID:14610273   PMID:15489334   PMID:15767678   PMID:15781470   PMID:15782199   PMID:15835887   PMID:16141072   PMID:16141073   PMID:17967808   PMID:18799693  
PMID:18973680   PMID:21267068   PMID:21873635   PMID:27899360   PMID:28378742   PMID:28512128   PMID:29765039   PMID:30550785   PMID:31831667   PMID:32554809   PMID:33230847   PMID:37658376  


Genomics

Comparative Map Data
Stt3a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39936,640,640 - 36,678,918 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl936,640,640 - 36,678,975 (-)EnsemblGRCm39 Ensembl
GRCm38936,729,344 - 36,767,622 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl936,729,344 - 36,767,679 (-)EnsemblGRCm38mm10GRCm38
MGSCv37936,539,998 - 36,575,163 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36936,481,044 - 36,517,312 (-)NCBIMGSCv36mm8
Celera933,935,517 - 33,969,930 (-)NCBICelera
Cytogenetic Map9A4NCBI
cM Map920.67NCBI
STT3A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811125,591,769 - 125,623,091 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11125,591,712 - 125,625,215 (+)EnsemblGRCh38hg38GRCh38
GRCh3711125,462,747 - 125,492,986 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3611124,967,967 - 124,996,168 (+)NCBINCBI36Build 36hg18NCBI36
Build 3411124,967,966 - 124,996,162NCBI
Celera11122,623,051 - 122,651,590 (+)NCBICelera
Cytogenetic Map11q24.2NCBI
HuRef11121,404,246 - 121,434,022 (+)NCBIHuRef
CHM1_111125,348,849 - 125,378,778 (+)NCBICHM1_1
T2T-CHM13v2.011125,621,493 - 125,651,713 (+)NCBIT2T-CHM13v2.0
Stt3a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8844,632,473 - 44,671,960 (-)NCBIGRCr8
mRatBN7.2836,443,623 - 36,483,111 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl836,446,788 - 36,483,293 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx840,452,846 - 40,492,526 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0838,735,905 - 38,775,584 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0836,598,791 - 36,638,472 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0839,204,218 - 39,243,751 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl839,181,163 - 39,243,882 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0839,207,076 - 39,246,467 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4837,977,378 - 38,016,865 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera837,957,877 - 37,997,621 (+)NCBICelera
Cytogenetic Map8q22NCBI
Stt3a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541226,595,666 - 26,623,621 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541226,593,142 - 26,624,143 (+)NCBIChiLan1.0ChiLan1.0
STT3A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29126,281,427 - 126,309,692 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111127,385,891 - 127,417,605 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011120,412,488 - 120,440,713 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111124,325,388 - 124,353,598 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11124,325,762 - 124,353,596 (+)Ensemblpanpan1.1panPan2
STT3A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.158,916,428 - 8,942,097 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl58,910,940 - 8,942,146 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha58,962,028 - 8,987,208 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.058,859,753 - 8,884,961 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl58,853,184 - 8,885,011 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.158,929,196 - 8,954,388 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.058,899,155 - 8,924,907 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.058,936,305 - 8,961,500 (-)NCBIUU_Cfam_GSD_1.0
Stt3a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947107,728,232 - 107,754,350 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049367431,975,847 - 2,000,100 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
STT3A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl952,724,441 - 52,754,669 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1952,726,794 - 52,754,671 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2958,380,053 - 58,407,896 (+)NCBISscrofa10.2Sscrofa10.2susScr3
STT3A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11116,734,393 - 116,762,820 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1116,734,393 - 116,762,231 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660439,307,922 - 9,336,325 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Stt3a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249271,577,534 - 1,606,596 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249271,577,504 - 1,608,328 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Stt3a
675 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1652
Count of miRNA genes:729
Interacting mature miRNAs:966
Transcripts:ENSMUST00000120381, ENSMUST00000128270, ENSMUST00000133060, ENSMUST00000135934, ENSMUST00000137994, ENSMUST00000138358, ENSMUST00000143881
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300849Sles4_msystemic lupus erythmatosus suppressor 4 (mouse)Not determined9910756237306370Mouse
13504833Bglu19_mblood glucose level 19 (mouse)9991076843910768Mouse
1300532Tbs2_mtuberculosis severity 2 (mouse)Not determined91236997046370114Mouse
10043917Obq37_mobesity QTL 37 (mouse)Not determined91339117547391175Mouse
1357637Si5lq2_mserum IGFBP-5 level QTL 2 (mouse)Not determined91541175149411890Mouse
4141591Cq4_mcholesterol QTL 4 (mouse)Not determined91541175149411890Mouse
1301421Lgth4_mbody length 4 (mouse)Not determined91541175149411890Mouse
4141447Cfmq2_mcystic fibrosis modifier QTL 2 (mouse)Not determined91541175149411890Mouse
12790993Adq1_maortic diameter QTL 1 (mouse)91574962749749627Mouse
11354951Pdcc3_mplasmacytoid dentritic cell compartment 3 (mouse)91574962749749627Mouse
12790997Adq2_maortic diameter QTL 2 (mouse)91574962749749627Mouse
12880415V125Dq7_mvitamin D active form serum level QTL 7 (mouse)91601129650011296Mouse
12880416V125Dq8_mvitamin D active form serum level QTL 8 (mouse)91601129650011296Mouse
13504834Hdlq109_mHDL QTL 109 (mouse)91670964150709641Mouse
1357465Vtbt6_mvertebral trabecular bone trait 6 (mouse)Not determined91697884050978943Mouse
1300643Pvcan2_mprotection against vaginal candidiasis 2 (mouse)Not determined91994340653943525Mouse
1301439Morph2_mmorphine antinociception 2 (mouse)Not determined92015336254153492Mouse
1301883Skull12_mskull morphology 12 (mouse)Not determined92030619754306370Mouse
1301045Sluc10_msusceptibility to lung cancer 10 (mouse)Not determined92030619754306370Mouse
10043950Pbft5_mpercent body fat 5 (mouse)Not determined92030619754306370Mouse
4142352Lmr17_mleishmaniasis resistance 17 (mouse)Not determined92030619754306370Mouse
12904939Edlmmq8_mextensor digitorum longus muscle mass QTL 8 (mouse)92085274054852740Mouse
13208563Bmiq8_mbody mass index QTL 8 (mouse)92491129668907282Mouse
11532712Sluc39d_msusceptibility to lung cancer 39d (mouse)92558748559587581Mouse
11532696Sluc39c_msusceptibility to lung cancer 39c (mouse)92558748559587581Mouse
11532694Sluc39a_msusceptibility to lung cancer 39a (mouse)92558748559587581Mouse
11532695Sluc39b_msusceptibility to lung cancer 39b (mouse)92558748559587581Mouse
10043987Stheal13_msoft tissue heal 13 (mouse)Not determined92679642160796552Mouse
1300932Hdlq17_mHDL QTL 17 (mouse)Not determined92679642160796552Mouse
10043867Mtbcq9_mmultiple trait body composition QTL 9 (mouse)Not determined92679642160796552Mouse
10043878Adip20_madiposity 20 (mouse)Not determined92725119461251323Mouse
1301000Obq5_mobesity QTL 5 (mouse)Not determined92850333341799326Mouse
10043847Hdlq89_mHDL QTL 89 (mouse)Not determined92929292963293072Mouse
1301782Chol11_mcholesterol 11 (mouse)Not determined92929292963293072Mouse
1301365Ap5q_malcohol preference 5 QTL (mouse)Not determined93005316464053277Mouse
1558949Igan3_mIgA nephropathy 3 (mouse)Not determined93041469440565914Mouse
1357746Vtbt7_mvertebral trabecular bone trait 7 (mouse)Not determined93073991564740021Mouse
4142455Elnv_mepilepsy naive (mouse)Not determined93127155837306370Mouse
1302180Actd4_mactivity-distance traveled 4 (mouse)Not determined93243456366434857Mouse
4141148Cq5_mcholesterol QTL 5 (mouse)Not determined93245242166452546Mouse
1301692Hts_mhypothermia sensitivity (mouse)Not determined93251117266511421Mouse
4141323Ptnu3_mproteinuria 3 (mouse)Not determined93288970266889836Mouse
1357709Si5lq3_mserum IGFBP-5 level QTL 3 (mouse)Not determined93311102567111140Mouse
1558872Ibdq1_minflammatory bowel disease QTL 1 (mouse)Not determined93397884073439255Mouse
1357682Phdlc1_mplasma HDL cholesterol 1 (mouse)Not determined93410461942764866Mouse
1300868Tlf_mT lymphocyte fraction (mouse)Not determined93483774837306370Mouse
1301252Etohc3_methanol consumption 3 (mouse)Not determined93503447869034599Mouse
1301972Cocrb8_mcocaine related behavior 8 (mouse)Not determined93503447869034599Mouse
1558968Tbdr1_mbody temperature response to dietary restriction, QTL 1 (mouse)Not determined93503447869034599Mouse

Markers in Region
BB081708  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38936,731,255 - 36,731,395UniSTSGRCm38
MGSCv37936,538,840 - 36,538,980UniSTSGRCm37
Celera933,934,359 - 33,934,499UniSTS
Cytogenetic Map9A4UniSTS
cM Map920.0UniSTS
Whitehead/MRC_RH9371.16UniSTS
RH124793  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38936,731,296 - 36,731,486UniSTSGRCm38
MGSCv37936,538,881 - 36,539,071UniSTSGRCm37
Celera933,934,400 - 33,934,590UniSTS
Cytogenetic Map9A4UniSTS
cM Map920.0UniSTS
UniSTS:236091  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38936,732,469 - 36,732,654UniSTSGRCm38
MGSCv37936,540,054 - 36,540,239UniSTSGRCm37
Celera933,935,573 - 33,935,758UniSTS
Cytogenetic Map9A4UniSTS
cM Map920.0UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_008408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC155921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK081427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK081547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX799090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC085313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KY499702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L34260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U25345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000120381   ⟹   ENSMUSP00000113116
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl936,640,640 - 36,678,975 (-)Ensembl
GRCm38.p6 Ensembl936,729,344 - 36,767,679 (-)Ensembl
RefSeq Acc Id: ENSMUST00000128270   ⟹   ENSMUSP00000114527
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl936,663,626 - 36,678,915 (-)Ensembl
GRCm38.p6 Ensembl936,752,330 - 36,767,619 (-)Ensembl
RefSeq Acc Id: ENSMUST00000133060   ⟹   ENSMUSP00000120360
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl936,670,499 - 36,678,646 (-)Ensembl
GRCm38.p6 Ensembl936,759,203 - 36,767,350 (-)Ensembl
RefSeq Acc Id: ENSMUST00000135934   ⟹   ENSMUSP00000117794
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl936,643,722 - 36,666,163 (-)Ensembl
GRCm38.p6 Ensembl936,732,426 - 36,754,867 (-)Ensembl
RefSeq Acc Id: ENSMUST00000137994
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl936,674,175 - 36,678,929 (-)Ensembl
GRCm38.p6 Ensembl936,762,879 - 36,767,633 (-)Ensembl
RefSeq Acc Id: ENSMUST00000138358
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl936,673,955 - 36,678,870 (-)Ensembl
GRCm38.p6 Ensembl936,762,659 - 36,767,574 (-)Ensembl
RefSeq Acc Id: ENSMUST00000143881
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl936,670,076 - 36,671,079 (-)Ensembl
GRCm38.p6 Ensembl936,758,780 - 36,759,783 (-)Ensembl
RefSeq Acc Id: ENSMUST00000215998
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl936,660,914 - 36,678,895 (-)Ensembl
GRCm38.p6 Ensembl936,749,618 - 36,767,599 (-)Ensembl
RefSeq Acc Id: ENSMUST00000217599   ⟹   ENSMUSP00000149855
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl936,666,156 - 36,678,905 (-)Ensembl
GRCm38.p6 Ensembl936,754,860 - 36,767,609 (-)Ensembl
RefSeq Acc Id: NM_008408   ⟹   NP_032434
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39936,640,640 - 36,678,918 (-)NCBI
GRCm38936,729,344 - 36,767,622 (-)NCBI
MGSCv37936,539,998 - 36,575,163 (-)RGD
Celera933,935,517 - 33,969,930 (-)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_032434   ⟸   NM_008408
- UniProtKB: P46978 (UniProtKB/Swiss-Prot),   Q3U573 (UniProtKB/TrEMBL),   Q3TG02 (UniProtKB/TrEMBL),   Q3TUR1 (UniProtKB/TrEMBL),   Q3TVN9 (UniProtKB/TrEMBL),   Q3U9H4 (UniProtKB/TrEMBL),   Q3UA28 (UniProtKB/TrEMBL),   Q5U412 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000149855   ⟸   ENSMUST00000217599
RefSeq Acc Id: ENSMUSP00000120360   ⟸   ENSMUST00000133060
RefSeq Acc Id: ENSMUSP00000117794   ⟸   ENSMUST00000135934
RefSeq Acc Id: ENSMUSP00000113116   ⟸   ENSMUST00000120381
RefSeq Acc Id: ENSMUSP00000114527   ⟸   ENSMUST00000128270
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P46978-F1-model_v2 AlphaFold P46978 1-705 view protein structure

Promoters
RGD ID:6844092
Promoter ID:MM_KWN:56828
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000120381,   OTTMUST00000078835,   OTTMUST00000078836,   OTTMUST00000078837,   OTTMUST00000078839,   UC009OTZ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36936,574,646 - 36,576,067 (+)MPROMDB
RGD ID:8669206
Promoter ID:EPDNEW_M12634
Type:initiation region
Name:Stt3a_1
Description:Mus musculus STT3, subunit of the oligosaccharyltransferase complex,homolog A , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38936,767,610 - 36,767,670EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:105124 AgrOrtholog
Ensembl Genes ENSMUSG00000032116 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000120381 ENTREZGENE
  ENSMUST00000120381.9 UniProtKB/Swiss-Prot
  ENSMUST00000128270.8 UniProtKB/TrEMBL
  ENSMUST00000133060.3 UniProtKB/TrEMBL
  ENSMUST00000135934.2 UniProtKB/TrEMBL
  ENSMUST00000217599.2 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.12610 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Oligo_trans_STT3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STT3-PglB_core UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STT3_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:16430 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:105124 ENTREZGENE
NCBI Gene 16430 ENTREZGENE
PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR13872 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam STT3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STT3-PglB_core UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Stt3a PhenoGen
UniProt A0A1L1SSD1_MOUSE UniProtKB/TrEMBL
  A0A1S6GWK0_MOUSE UniProtKB/TrEMBL
  D3YZN5_MOUSE UniProtKB/TrEMBL
  D6RDS9_MOUSE UniProtKB/TrEMBL
  F6YHG5_MOUSE UniProtKB/TrEMBL
  P46978 ENTREZGENE
  Q3TG02 ENTREZGENE, UniProtKB/TrEMBL
  Q3TUR1 ENTREZGENE, UniProtKB/TrEMBL
  Q3TVN9 ENTREZGENE, UniProtKB/TrEMBL
  Q3U547_MOUSE UniProtKB/TrEMBL
  Q3U573 ENTREZGENE, UniProtKB/TrEMBL
  Q3U9H4 ENTREZGENE, UniProtKB/TrEMBL
  Q3UA28 ENTREZGENE, UniProtKB/TrEMBL
  Q5U412 ENTREZGENE, UniProtKB/TrEMBL
  Q8BMP9_MOUSE UniProtKB/TrEMBL
  Q8BWT4_MOUSE UniProtKB/TrEMBL
  STT3A_MOUSE UniProtKB/Swiss-Prot