Vps41 (VPS41 HOPS complex subunit)

Gene: Vps41 (VPS41 HOPS complex subunit) Mus musculus

Analyze

Symbol:

Vps41

Name:

VPS41 HOPS complex subunit

RGD ID:

1557316

MGI Page

MGI

Description:

Enables microtubule binding activity. Predicted to be involved in several processes, including endosomal vesicle fusion; macroautophagy; and vacuolar transport. Predicted to act upstream of or within autophagy and protein transport. Located in early endosome; late endosome; and microtubule cytoskeleton. Is expressed in embryo; extraembryonic component; and primitive endoderm. Human ortholog(s) of this gene implicated in autosomal recessive spinocerebellar ataxia 29. Orthologous to human VPS41 (VPS41 subunit of HOPS complex).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

AI317346; MGC159002; mVa; mVam2; Va; vacuolar protein sorting 41; vacuolar protein sorting 41 (yeast); vacuolar protein sorting-associated protein 41 homolog; Vam2; VAM2 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	VPS41 (VPS41 subunit of HOPS complex)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Vps41 (VPS41 subunit of HOPS complex)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Vps41 (VPS41 subunit of HOPS complex)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	VPS41 (VPS41 subunit of HOPS complex)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	VPS41 (VPS41 subunit of HOPS complex)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Vps41 (VPS41 subunit of HOPS complex)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	VPS41 (VPS41 subunit of HOPS complex)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	VPS41 (VPS41 subunit of HOPS complex)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Vps41 (VPS41 subunit of HOPS complex)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	VPS41 (VPS41 subunit of HOPS complex)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Rattus norvegicus (Norway rat):	Vps41 (VPS41 subunit of HOPS complex)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	vps41 (VPS41 subunit of HOPS complex)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Saccharomyces cerevisiae (baker's yeast):	VPS41	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	lt	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	vps-41	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	vps41	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	18,901,462 - 19,050,981 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	18,901,456 - 19,050,981 (+)	Ensembl		GRCm39 Ensembl
GRCm38	13	18,717,292 - 18,866,811 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	18,717,286 - 18,866,811 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	18,809,161 - 18,958,680 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	18,724,764 - 18,874,268 (+)	NCBI		MGSCv36	mm8
Celera	13	19,025,759 - 19,178,125 (+)	NCBI		Celera
Cytogenetic Map	13	A2	NCBI
cM Map	13	6.75	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal recessive spinocerebellar ataxia 29 (ISO)

genetic disease (ISO)

pleomorphic xanthoastrocytoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (ISO)

(S)-nicotine (EXP)

1,2-dimethylhydrazine (EXP)

1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (EXP)

acrolein (ISO)

acrylamide (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butan-1-ol (ISO)

caffeine (EXP)

CGP 52608 (ISO)

copper(II) sulfate (ISO)

coumestrol (ISO)

crocidolite asbestos (ISO)

dexamethasone (ISO)

diarsenic trioxide (ISO)

dibutyl phthalate (ISO)

endosulfan (ISO)

ethanol (EXP)

folic acid (EXP)

fulvestrant (ISO)

glafenine (ISO)

hydrogen peroxide (ISO)

indometacin (ISO)

L-ascorbic acid (ISO)

methyl methanesulfonate (ISO)

methylparaben (ISO)

nickel atom (ISO)

nicotine (EXP)

ozone (ISO)

pirinixic acid (EXP)

sodium arsenite (EXP)

sodium fluoride (EXP)

succimer (EXP)

tetrachloromethane (ISO)

thioacetamide (ISO)

valproic acid (ISO)

vinclozolin (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

autophagy (IEA)

cellular response to starvation (IBA)

endosomal vesicle fusion (IBA,ISO)

endosome to lysosome transport (ISO)

Golgi vesicle transport (ISO)

intracellular protein transport (IEA)

intracellular transport (IEA)

late endosome to lysosome transport (ISO)

macroautophagy (IBA)

protein targeting to vacuole (IBA)

protein transport (IEA)

regulated exocytosis (ISO)

vesicle-mediated transport (ISO)

Cellular Component

AP-3 adaptor complex (ISO)

clathrin complex (ISO)

clathrin-coated vesicle (ISO)

cytoplasm (IEA)

cytoplasmic vesicle (IEA)

cytosol (ISO)

early endosome (IDA)

endosome (IEA)

endosome membrane (ISO)

Golgi apparatus (IEA)

Golgi-associated vesicle (ISO)

HOPS complex (IBA,ISO)

late endosome (IBA,IDA,ISO)

late endosome membrane (ISO)

lysosomal HOPS complex (ISO)

lysosomal membrane (ISO)

lysosome (ISO)

membrane (ISO)

microtubule cytoskeleton (IDA)

Molecular Function

identical protein binding (ISO)

metal ion binding (IEA)

microtubule binding (IDA)

protein binding (IPI,ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal egg cylinder morphology (IAGP)

abnormal embryonic tissue morphology (IAGP)

abnormal endocytosis (IAGP)

abnormal endoderm development (IAGP)

abnormal germ layer development (IAGP)

abnormal lateral plate mesoderm morphology (IAGP)

abnormal mesoderm development (IAGP)

embryonic lethality between somite formation and embryo turning, complete penetrance (IAGP)

increased ectoderm apoptosis (IAGP)

no abnormal phenotype detected (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	MGDs mouse GO annotations	MGD data from the GO Consortium
2.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Mammalian late vacuole protein sorting orthologues participate in early endosomal fusion and interact with the cytoskeleton.	Richardson SC, etal., Mol Biol Cell 2004 Mar;15(3):1197-210. Epub 2003 Dec 10.

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11110696	PMID:11217851	PMID:12124942	PMID:12477932	PMID:12520002	PMID:14610273	PMID:15489334
PMID:15784610	PMID:16141072	PMID:16141073	PMID:17967808	PMID:18799693	PMID:21267068	PMID:21873635	PMID:22698281	PMID:23245320	PMID:24457600	PMID:26496610	PMID:30409884
PMID:32968282	PMID:33168621	PMID:37562348

Genomics

Comparative Map Data

Vps41
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	18,901,462 - 19,050,981 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	18,901,456 - 19,050,981 (+)	Ensembl		GRCm39 Ensembl
GRCm38	13	18,717,292 - 18,866,811 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	18,717,286 - 18,866,811 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	18,809,161 - 18,958,680 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	18,724,764 - 18,874,268 (+)	NCBI		MGSCv36	mm8
Celera	13	19,025,759 - 19,178,125 (+)	NCBI		Celera
Cytogenetic Map	13	A2	NCBI
cM Map	13	6.75	NCBI

VPS41
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	38,722,974 - 38,909,191 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	38,722,974 - 38,932,394 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	38,762,574 - 38,948,791 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	38,730,068 - 38,915,325 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	38,538,394 - 38,682,088	NCBI
Celera	7	38,751,388 - 38,936,638 (-)	NCBI		Celera
Cytogenetic Map	7	p14.1	NCBI
HuRef	7	38,647,724 - 38,832,980 (-)	NCBI		HuRef
CHM1_1	7	38,766,111 - 38,951,374 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	38,880,029 - 39,066,224 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	38,801,230 - 38,986,499 (-)	NCBI

Vps41
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	50,758,732 - 50,923,129 (-)	NCBI		GRCr8
mRatBN7.2	17	46,063,132 - 46,227,533 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	46,063,124 - 46,227,791 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	17	49,259,125 - 49,416,986 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	53,262,047 - 53,419,908 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	47,372,921 - 47,531,055 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	48,643,754 - 48,810,633 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	48,648,879 - 48,810,991 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	46,702,308 - 46,866,329 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	53,893,474 - 54,063,005 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	17	42,165,613 - 42,324,736 (-)	NCBI		Celera
Cytogenetic Map	17	q11	NCBI

Vps41
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955460	4,555,870 - 4,749,153 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955460	4,555,870 - 4,749,154 (+)	NCBI	ChiLan1.0	ChiLan1.0

VPS41
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	43,554,730 - 43,762,833 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	91,879,465 - 92,087,568 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	39,355,578 - 39,543,281 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	39,589,893 - 39,776,992 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	39,590,587 - 39,776,937 (-)	Ensembl	panpan1.1		panPan2

VPS41
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	10,788,846 - 10,956,207 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	10,788,891 - 10,955,645 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	10,636,490 - 10,810,220 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	10,838,609 - 11,006,057 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	10,838,645 - 11,006,057 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	10,810,095 - 10,983,580 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	10,784,236 - 10,951,239 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	10,899,366 - 11,067,148 (+)	NCBI		UU_Cfam_GSD_1.0

Vps41
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	95,084,728 - 95,242,966 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936478	14,293,108 - 14,454,707 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936478	14,296,191 - 14,454,650 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

VPS41
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	55,301,624 - 55,466,628 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	18	55,293,655 - 55,466,628 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	60,565,808 - 60,729,840 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

VPS41
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	19,629,271 - 19,814,360 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	19,629,282 - 19,817,649 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666062	2,573,777 - 2,779,166 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Vps41
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624740	22,121,571 - 22,299,193 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624740	22,121,772 - 22,297,514 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Vps41
5315 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	175
Count of miRNA genes:	154
Interacting mature miRNAs:	157
Transcripts:	ENSMUST00000072961
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1301890	Adip7_m	adiposity 7 (mouse)			Not determined		13	1	23454672	Mouse
1301227	Skull19_m	skull morphology 19 (mouse)			Not determined		13	1	23454672	Mouse
1301661	Tshp13_m	tooth shape 13 (mouse)			Not determined		13	1	23454672	Mouse
1301255	Cd4ts6_m	CD4 T cell subset 6 (mouse)			Not determined		13	168545	34168684	Mouse
10449140	Eosn2_m	eosinophil differential 2 (mouse)					13	221311	34221311	Mouse
15039338	Nmrs34_m	NAFLD-associated magnetic resonance shift 34 (mouse)					13	221311	34221311	Mouse
1301455	Bmd3_m	bone mineral density 3 (mouse)			Not determined		13	3477612	37477820	Mouse
10045624	Heal24_m	wound healing/regeneration (mouse)			Not determined		13	3477612	37477820	Mouse
10045625	Heal23_m	wound healing/regeneration 23 (mouse)			Not determined		13	3477612	37477820	Mouse
1301367	Twq1_m	testis weight QTL 1 (mouse)			Not determined		13	3615512	37615672	Mouse
1301733	Heal3_m	wound healing/regeneration 3 (mouse)			Not determined		13	3680200	37680343	Mouse
26884393	Humsd7_m	humerus midshaft diameter 7, 16 week (mouse)					13	3950000	76048119	Mouse
1558898	Hpi1_m	hapatic PMN infiltration 1 (mouse)			Not determined		13	4414025	53101640	Mouse
10402494	Igmsc1_m	immunoglobulin M secreting cells 1 (mouse)			Not determined		13	17168545	44918560	Mouse
1301984	Pbd2_m	peak bone density 2 (mouse)			Not determined		13	17189508	38947406	Mouse
1301880	Hypt_m	hypertension (mouse)			Not determined		13	18156792	52156924	Mouse

Markers in Region

AI317346

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	13	18,866,595 - 18,866,748	UniSTS	GRCm38
MGSCv37	13	18,958,464 - 18,958,617	UniSTS	GRCm37
Celera	13	19,177,909 - 19,178,062	UniSTS
Cytogenetic Map	13	A2	UniSTS
cM Map	13	9.0	UniSTS
Whitehead/MRC_RH	13	243.58	UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_172120	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006516641	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB028843	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC123554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC163721	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC169128	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC210924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF327407	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AI851542	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK051489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK051658	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK150948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK162208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK164177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC005530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC023243	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC024557	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC049916	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC057905	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC119362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC125299	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466561	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000072961 ⟹ ENSMUSP00000072729

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	18,901,460 - 19,050,981 (+)	Ensembl
GRCm38.p6 Ensembl	13	18,717,290 - 18,866,811 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000222010

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	19,007,965 - 19,012,319 (+)	Ensembl
GRCm38.p6 Ensembl	13	18,823,795 - 18,828,149 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000222102

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	19,029,033 - 19,031,235 (+)	Ensembl
GRCm38.p6 Ensembl	13	18,844,863 - 18,847,065 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000222269

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	18,901,456 - 18,933,169 (+)	Ensembl
GRCm38.p6 Ensembl	13	18,717,286 - 18,748,999 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000222813

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	18,964,013 - 19,011,825 (+)	Ensembl
GRCm38.p6 Ensembl	13	18,779,843 - 18,827,655 (+)	Ensembl

RefSeq Acc Id:

NM_172120 ⟹ NP_742118

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	13	18,901,462 - 19,050,981 (+)	NCBI
GRCm38	13	18,717,292 - 18,866,811 (+)	ENTREZGENE
MGSCv37	13	18,809,161 - 18,958,680 (+)	RGD
Celera	13	19,025,759 - 19,178,125 (+)	RGD
cM Map	13		ENTREZGENE

Sequence:

show sequence

GTCACATGACTCTCAGGCTGCGCTATGGCGGAAGCAGAGGAGCAGGAAACCGAGTCTCTTGAAG
AATCTACGGATGAGTCAGAGGAAGAAAGTGAAGAGGAACCCAAACTGAAGTATGAAAGGCTTTC
CAATGGGGTGACAGAGATTCTTCAGAAGGATGCAGCAAGCTGTATGACGGTCCATGACAAGTTT
TTGGCACTGGGAACACATTATGGCAAGGTTTATTTACTTGATGTCCAGGGAAACATCACTCAGA
AGTTTGATGTAAGTCCTGTGAAGATAAACCAAATTAGCTTGGATGACAGTGGAGAACACATGGG
AGTGTGTTCAGAGGATGGCAAGCTGCAGGTCTTTGGGCTGTATTCTGGAGAAGAATTTCACGAG
ACTTTTGACTGTCCCATTAAAATCATTGCTGTGCACCCACAGTTCGTGAGATCCAGTTGTAAGC
AGTTTGTGACTGGCGGGAAAAAGCTGCTGCTGTTTGAACGGACCTGGATGAACAGATGGAAGTC
TTCTGTGCTACACGAAGGGGAAGGAAACATAAGGAGTGTGAAGTGGAGAGGCCATCTGATTGCT
TGGGCCAACAATATGGGTGTGAAGGTTTTTGACATCACCTCAAAGCAAAGAATCAGCAATGTGC
CCCGAGATGACATAAGTCTTCGCCCAGACATGTACCCCTGCAGCCTCTGCTGGAAGGACAATGT
GACACTCATTATTGGCTGGGGAACTTCCATCAAGATATGCTCAGTGAAGGAACGCCACGCCAGT
GAGATGAGGGATCTGCCAAGCCGATATGTTGAGATAGTGTCTCAGTTTGAAACTGAATTCTACA
TTAGTGGACTTGCACCTCTCTGTGATCAGCTTGTTGTACTTTCCTACGTAAAGGAGGTTTCAGA
AAAAACGGAAAGAGAATACTGTGCAAGACCTAGACTGGACATCATCCAGCCACTTCCGGAGACT
TGTGAAGAGATCTCCTCCGATGCTTTGACAGTCAGAGGCTTTCAGGAGAATGAATGTAGGGATT
ACCACTTAGAATACTCCGAGGGGGAATCACTCTTCTATGTCGTGAGTCCAAGAGATGTCGTCGT
AGCCAAGGAACGAGACCAGGATGATCACATCGATTGGCTCCTTGAGAAGAAGAAATATGAAGAA
GCTTTGATGGCTGCTGAAATTAGCCAAAGGAACATTAAACGACATAAGATTCTGGATATTGGGT
TGGCATATGTAAACCACCTGGTGGAGAGAGGAGAGTACGACATGGCTGCAAGAAAATGCCAGAA
AATTCTTGGGAAAAATGCATCCCTCTGGGAATACGAAGTTTACAAATTTAAAGAAATTGGGCAG
CTTAAAGCAATTAGTCCCTATTTACCTCGAGGGGACCCAGTTCTGAAACCACTCATCTATGAAA
TGATTTTGCACGAATTTCTGGAAAGTGACTATGAGGGCTTTGCCACATTGATCAGAGAGTGGCC
TGGAGATCTATATAACAATTCCGTGATAGTTCAGGCAGTTCGAGACCACCTGAAGAAGGACAGT
CAGAACAAAACGTTATTGAAAACACTGGCAGAATTGTACACCTATGACAAAAATTATGGCAATG
CTCTGGAAATATACTTAACGTTAAGACATAAAGATGTTTTCCAACTGATACACAAGCATAATCT
TTTCAGCTCCATCAAGGATAAAATTGTGTTATTAATGGATTTTGATTCAGAGAAAGCTGTTGAC
ATGCTTTTGGACAATGAAGATAAAATTTCAATTAAAAAAGTGGTAGAAGAATTAGAAGACAGAC
CAGAACTGCAGCATGTGTATTTGCACAAGCTCTTCAAGAGAGACCATCATAAGGGACAGCGCTA
CCATGAAAAGCAGATCAGTCTGTATGCCGAGTATGACCGACCAAACCTGCTTCCCTTTCTCCGA
GACAGTACCCATTGCCCACTTGAAAAGGCACTTGAGATCTGTCAACAAAGAAACTTTGTAGAAG
AGACAGTTTACCTTCTGAGCCGAATGGGAAACAGTAGAAGTGCCCTCAAGATGATTATGGAGGA
ATTGCATGATGTTGATAAAGCAATTGAGTTTGCCAAGGAACAAGATGATGGAGAGCTCTGGGAA
GATCTGATTCTATACTCCATCGACAAACCACCATTTATCACTGGCTTGTTGAACAACATTGGCA
CACATGTGGACCCGATTCTACTTATCCACCGAATTAAGGAAGGAATGGAGATTCCCAATTTGAG
AGATTCCTTGGTTAAAATTCTGCAAGATTATAACTTGCAGATTCTGCTTCGAGAAGGCTGCAAG
AAAATCCTCGTAGCTGACTCATTGTCGTTGCTGAAAAAAATGCACCGAACCCAAATGAAAGGCG
TTCTGGTTGATGAAGAGAATATCTGTGAATCATGCCTTTCTCCCATCCTCCCAACAGATGCAGC
GAAGCCCTTCAGCGTGGTGGTCTTCCACTGCCGGCACATGTTCCACAAGGAGTGCCTGCCTATG
CCGAGCATGAATGCTCCTGCACAATACTGCAACATCTGTAGTGCTAAGAACCGTGGGCCTGGAA
GTGCCATCCTGGAGATGAAGAAGTAGGCCTGCCTGCCTGCCCACCCTTTGCCACTCTCCACTGA
GTGACTGCTGGACCACAGCAGCTGTGTCAACGCCAGTGCTGTTGAGTGACGTGTTCAGGGCTCC
TCGGAGCTCCCCGTCAGTTGTTTTCTCCAGACCTTCCTTCCAGAAGCTGCTCCTTGTCACCGAT
GGAGAAGTCGAAGCTCTTCCCATGCCATGAAATATTGCATTGCTAATCAGTATTTCATGATTTG
TTTATTTGGCTTATTTAGTTAGCAAAAGAGTTCAAAGTGACTTCGTTATACCCTAGTTACACCC
ACCAGGCATGAACTGCACTACTGAGAACACTGCCAGCTACAGTCGGCCAAAAGTTCTGCTGGTA
ACAGTTCTGGCATGCCTGGCTACACTGTTTGTCATCAGCTGTGGGTAGCCTCCTAAAGCGCATT
TAGAGGTAAAAATTAAAATTAAAGGTAAAATGCTGAGAACTGACACTCCTTCAGTGACATGTGG
GAAGACCATTAGCTGGGGTACTATAGCCTTATGTTTGCTACCTACGCGCTGACTAGCTCAGTTA
TCTGCCCCATCAGGTCATCAATATTTGTTGAATGAATAAATGTTGCCCTTCTCATTGTGAAAAA
AAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006516641 ⟹ XP_006516704

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	13	18,982,299 - 19,050,981 (+)	NCBI
GRCm38	13	18,798,129 - 18,866,811 (+)	NCBI

Sequence:

show sequence

ATTTGTGGGCTCTGGGTGTCTTCTGCCTGCTTGTACCACATGGCAGCAGCAGGCCTCTGAAGTA
GTGACTATTGTGAGCAGTTAATTTCTTCTGGTATATGTTGGCCAACTTTTAAGAGTTATTAATT
GAGTTATAAAAGTTTATAAACGTTGAAAAATGAGGAAAGCAAAGACTGCATTGGTCCAAAAGCA
ATTCTTATTGCTTTAACTGGAGTTTTAAACTAGCACCATAAATTCACGCAACAATCTGAAGAGT
CTAGCATTTAGTAATTATTGATAACCTTATAATAATGGTATGTCATGGGCACCAAGAGCCTACT
GAATAGTGTAAAAAGCAGATGATGTAGAAGAAAAGGAACAAAAAAGGCAAATACTGTGTAACTG
AGAGGTTAGAATCAGAAATAACTTGATATTTCAAATACCTAGAGAAGAACTGCCCAGATGGAGG
TATGATGTGCAACACAGGTGTTTTACCATAAGAACACTGATCTGTTCTGTAGTCCTTTACATTG
TGAGCCAACTTCTATAAACAGGGTTGAAGTGGCCCATAGGCTGGGAACAGGGAAAGCAGGCAGG
AAAGCAAAGGCCTGCTATTAAGATATGTGGGCTATTCATAAGAATACCGAGACACTGTATTTAA
TATTTTAGTTGTTTAAGTCTGTTTTAAAGATTGATTTGTTTGTCTACTTATTTTATATATGGGC
ATTTTGTCTGCACACCAGAAGAGAGTATCAGGTCCAATATAATCGCAGTTAAAAGATTTCGAGC
CACCATGTGGATGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGCCTATTTTCTTAACAGC
TGAGCCATCTTCCCAGCCCCCAGTTGTTTAAATACTGTGAAGAGACACATACCATGACCAAGGT
TAGGGCTGGTGTATAGTTTCAGAGGTTCAGTCCATTATCATCATGACAGAAAGCATGGCAGCGT
GCAAGTAGACATGGTGCTGGAGGAACTTGAGTTCTACATCTGGATCAGCAGGCAGCAGGAATCA
AATGGCTTGAGCTTCTGAGACCTCAAAGCCCACTCCCTAGTTATGGACCTCCAACAAAGGGGTA
CCGGTGCACAGCACACCTCCTAGCAGTGCCACCTCCATGCACCTGTGGGGGGGGGGGGGTTAAT
TCAAGCCACAACTATTAAAGTTAATTTCGTAAAATGTCCCAAAGCAATTAAAATTTTCATTTCA
GAGTTGTGCCACATAAATATAGGAGTGTGCAGGAAATTCCAGAGACTGCCATGGCCCTGTCTCA
TTCGCCTTTCAAGGTTCTAGCTCTGTAGTTTGGGGAGACCATGGCTTCTCCGTAGTGGACTAGG
AATAGTAGGCCGGAGGGGTTTTGTTTTTTTTTTCTTTTTATGTTTAGAATTTTTTTTGATTCCC
AAGGAAACAGTATAATTAACAGTGGACTCTACTGCTTGACACTCGAGCATAAAAAGCATATTTA
GAATTATGGTTTGTTTCCATGTTAAAAAAAAGAAAGAAAACGAAGAAGAAGCCCATCTTCCAAA
CGTGTTGTCCGAGGGGCTCTAACACAGGAACCAATGGAATTTTACACAAGGAGGAACTCTGATA
AATGAGCATAGCCAGGGAGTTTTGGCTTTAGATGAAAAACTGCAGTGTCCTGTGTGGATGCTCT
GTTTTGCTTTGCTTTGTTTTGTTTTGGTTTGGTTTGGTTTGGTTTGATTTGATTTGATTTGATT
TGATTATAATGTATGGCTTTCTTTGTCAGCAAGATAAGCTTAGTTTTACATAACCTTTACCTTC
AACTCTGGACTACCCTTCACTGCTAGCTGATTCCACTCCTTTCACAGTTCATTGTGGCACTGTT
TGTGGTGGGGTCCACTGTTAAATGTGAGGTAGTCAGCTGCTTGACATTATTGGTAAAGGGAAGG
GACCTGGGTGCGGAGGCAGGTTGCTTTATATGCTGAAAAATGTCAGTCAGCAGACAGGAAAAGG
ACCTTCTGAATGAAAAGAGGACAGCCACTTTCCTGTTCTAGGTTGGAGTCTTGTGGTAGGTTTT
TGTTTGCTTGTCTCTTTGTTTGGGGGCTGTGGTTGCATCCTACCCTGCCTGTAGGCTTCCAGTA
GTGCTCCAGGATTTTGACAATGCTAGGTACACTGTTGTGTACAGTGCAGAGCTCAGCTGTCCTG
GATAGCTGTGAGCATTGTACTGGGGTGGTCCGGGCCACCTTCTCCAGGCGTGCCGTGTCACACA
GTTTACCATTATACTTTTCATCGGAGCCTTTTTGAAGAATTAAGAACACATGTTGAGGATTTCC
TGGTCACGTCAGTATTAAGCCACAGGATAGTGCCAAGGTTATGGACTAGTGGCTTTGTGCTAAA
CTGCTAAAAAAGTCCCCAGTCCCATCCTGCTTTGGGAAGCTCTGTTCTAAGTTGTGTTTCTGTT
CCTAGAATTTAGTGCTGTCAGCACATCAACACTGTATAAACACAAACTAACAGGAAGTAAGACA
CAAACGGAACCTCCACAAACCATGTTTCTCAGTCATATAAAACCAATTTGCAAATTAACTCTGT
GGCAACATATTTGGGTGTAGTTTTCTGTATATTCTATACTGGTTGAGGCTAAAAATAGAATCAG
TTCCTCAAACTAGAAATCATTTACGTCACAACATTGACATCTTCTTATTCATTTGTGCCAAGTG
TCAGTTGCTTTCCTACTGTTTCTCTGTAGGATTCCCAGTCCTGGGATGGTGTCTACACTGCATG
TGGAATGTGGGAAGGATCATGCTAGCTTCATTTGCTGTATGATCCTGTTTAAACAGGCAATCGA
ATGCCCGTTAAAGCTTTTCTGCCAGAAGGTCAATTTTTTAAATAAATTCAATAAATTTAATTTT
TTAAAAAAATTTCCGTATGAGCCGGGCAGTGGTGGCGCACACCTTTAATCCCAGCACTTGGAAG
GCAGAGGCAGGAGGATTTCTGAGTTTGAGGCCAGCCTGATCTACAGAGTGGGCTCCAGGATAGC
CAGGCCTACACAGAGAAACCCTGTCTTGAAGAAAAAAAAAAAAAAAGAAAGAAAAAAAATCCAT
ATGTAATATTTCTTTTTTGTGGTTCATGTTCACATGTATGTGTGTATGCATGTAATTGTGTCTA
ATCATACATGTGGAGACCAGAGGACAACCTCAGGTGCTATTCCTCAGCTGTAGTCCACACCTCT
CTCCCTCTCTCCTCTCACTCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCTCTTTCTCCCTC
TCTCCCTCTCTCCATCTTTCCCTCTCTCTCTCCCTCTCTCCCTCTCTCCATCTTTCCCTCTCTC
TCTCTCCCTCTCTCCTCTCTCCCTCTCTTCCTCTCTCTCTCTGTCTCCTGTATTTTTTTTAAAA
AGATGGTCTTTCACTGACCTGAACTATGAAATACTAATCAGTTAACTAACTAGTTAATTATTTA
ATTCAATCTGTGTGGAGTAAGATGACCAGTCATTGAGCCTCAAGCAGTCAGCCCTCCCGTGACT
CCCCAGTAGTGGTACTGAAAGCATTTGCTTGCCTTCCTTTACATGGGTTCTAGGGATCAAACTC
AGGTCTTCATGCTTATAAGGCAAGCACTATGCAGCCCTTTCTATGTGTCATGTATGTAATTGAC
CATAGCACTTCCTTGAATCCTTCTCTTCCTGGAGCAATCAAGCCTCTTTGCTTCCTATTTACTG
TATCTCTCATTGCATATTTGAATAATAAAACTGGTGGATTGATGCTCGTCATGTTTTCCTGTGG
GGCTTGATACAGAGGGACTGTTATTAATATTCCCTCTTTCCCTTTCTTTCCAAGTAGGGCTGCA
TAAAATAAGGGATTACAGGAACAGCCGTTGTTAGGTAGTATCACTCAGACAAACCAAAGTGCTC
ATTTCAAGGACTACTTAGCTCAAATCGGCTTTCTGAGCATATTCCTTTGCAGAGGGTCCCAGAT
AGTGTTATTAGTGTCATTGCATGCACACTACTATGTTGTGACAGTGGGTGGTTGTTTTCAAAAG
AGTGTGGGTCAGGCAGTAGTAGTCGAATGACATTAGTAAGATTATTAATTAGCCAGAATGATGA
TCTGGTGAGAAAATAAATATTCTGAATCATTTGAGAAAGAAACTTGTATACAGGTATTTTTATT
TGTATGTATATATGTAAGAATGTTTATGGAGAAATCTGGTAGTGTTCTTTTCTTTGTTTTTAAG
CTTCCAAACAATATTTCTCTTGGATATTTTTTAACATTGAAGATTGAAACATACTACATACCTA
GATGGCTGTGTGCCCTTTATCTCTAGATCACTAGGAGAACTGCCATAGGTTTTAGGAAGAAGAT
GTCAAAAGATAATCTTTGAAGATGGAGCCAATTTCAGGATGTGATTTGCAGGAGGCAATTGTTT
GTTTTAGAATCTAGGCTGTATACGAGGCCAGAGTGATCATGTTCTTGAGTAGCTAAATAAGCCT
TATCTAAAAGGAGGGAGGCTACACCAAGGCTCAGTGCAAGAGTAACGAAGCAGGATCAGGGCCT
TCCATCTTAGATGGGATGAGCTTGTAATTATTTTTGGAAAGTGTTCATACAGACATGCTTATGG
AGTCGGCTTGTTTTTACCAAGATCCTTCACGCTCACCCAGTGGCCTTCTACACTGCTGGTGCTC
TATGAAGTTGTTTGTTTATCAGCAGACCAAGGCTTACCTGTGAGTGACAAGCCAAGCTCTTAAC
AGATCAATCTTTCCCTTTGTCAATGGCTTTAATAAGTGGTGTGATAACATCTGATAAATTGTTT
TTATTGATGTACTTTTTTAAAGTGTATGAAGGGTCCCCTGGCATTGTTTTAGAAATATAATTAT
GTGTGTAGGTATATTCAAGAAGGGCTATACACCAAATCATTGATTATGGTATGTCTGAGCAAGA
TTATGAACTTACTTTCTGGTCGTCTTTTTGCTAGACATATTCATTTATTTTATAGATCACAGGC
CCTCATGCTTGTTAGGGAAGCTCCACCCATTGCCCTCCACCTCTAGTGTACTAATGCTATCAGC
TGTACAACTAGGCTTCACTGCGGCATTTCTGTAAAACATACATTGTGTTTTGAATGTGTCTATC
CTCCTTATTTATTCTTACCCATTCTTTTCTTCCTTCCTATTTCTCTATACTTGCATCTCTCCTC
CCACTCCATTCCCTTCCCTTAGTGGACTCTCTTCTACTTACAAGTTGTGTTTTAAAATCTGTCT
TGCTTATTTCACTCAGCATAATCTCCAGTTTCATTTATTGTCTTGCATATAACTTATCATTTTT
TGTGATTGAATAGGATTCCTTTATGCATTTATGCCATAGTTTCTTTATACTTCTGTCTTAGGAT
TTCTAGTGCTATGAAGAGACACTATGATCACAGCAACTCTTATGAAGAAAATTATTTTATTGGG
ACTGGCTTACAGTTCAGAAGTTTAGTCCCCGTCATCCTGAGGGAACATTGTGGAACTCAGACAG
ATATGGGACTGTGGAGGTGGCTGAGAGTTCTGTATCTAAATCAGTAGACAGCAGGAAGAAAGTG
TGACACTGGACCTAGCTTGAGCACCTTGAGACCTCAAAGCCCATCCCTAGAGATACGTTTTGTC
CTACAATGCCGTAGTACTCCTGCAAGGTCACACCCACTAGTATTAGTATCACTCCCTATGAACC
TGGGGGGAGGGGGCATTTTTTTCAAACCACCACAGCTTCCATCTCCTAGTGGGCACCTAGGTTT
ACTTCATAACTTAATTACTACAAATAATACTCCAGTAAACATGGACGCACAAATATCTCTGTAG
TATGATTAGATTTTTCCATTTTCTTGAGGACCATCCCTACCAACTTTCACAGTGACTCAACTCA
TTCCCGTTCTCACCAGCAGTGCATAGGGCTTTTTCTCCCACATTCTCATCAGCATTAGAAATTG
TTTGCTTTGCTTGTTTGTTTGTTTGATAATAGCCAATCTGATTGGGTTGGAAATCTCAAAGTAT
GTGAGGTTGGCATTCCTTTCTGACCAAAAAAATTGAAAAGTTTTTCATCTATTTATTGGCCATC
TGTTCTTCTCTTGAGATGTATTTGTTCAGATGTTACTTTTTAGCTGGGTGATTAGTTTTCTCCT
GATTAAGTTGTGCTAATTGTCATATGTTCTAGATAGTCATTACCGCTGCTTGGTAACTGTCCCT
GTCTATATGCCATCTCTTCACTTGCTCATTTTCTTTGTGGTGCTGAGTCTAGCAATCATTGGGC
ACAAGTTTTTGTCTGTTGTTGGAATTATTTTTCTAGCATTGATTCCTTTGATTAGAATTATTAG
GTCACAGGTTATCACTAGCTTTTAAGTACTTGAACCCATTGCCAAGTAAACTTACATTCCAAGC
AATGCACATTCATTTAGCCCAGCTGTGTACAAACAACCTCAGTCATTGTTTTCCCTGCCAACCA
TTATTTTTCAGGGTCTTTAACTATTAGAGATTTTGAAAATTTTATTATCCTCATCTAGATCTGC
CTTTGTGGTGTGTCTGATACAATTCTTTGCTCAGGGCAGCTTTTAATGTAATAGAAGCCAGGCC
AGTGAAGACTGACCACCTGATATTTATTGTCACTTTGAACACAAATTATTGCTGCCTATTACTG
AGTAGCCTGAAGCCTTTTTACTAATACTGCCTAAATCTGGGATAATTATTCCTGTTCTCAAGAA
GATACTCTATAGGAGGCCAAGTGAGCCAAGTAGAGGTTGAAGTGTATCAGGAGTGACTGCGTGT
TGACTGCGTTTGCAGATCACGTCCCGGGGATGTGAGTCCATCCAAACCCATCAGTTCTGCTTCT
AGACCTACCAGTGACTGACCGTGTCCACTTAGTGTCAGGCTTCAATAAAGATGAGAGGAAAGCT
GATTAGAACAGATTAAGTGAATTCATTTCTCAGGCATCTGTAGGTGCAAAGACAACAGTGCTAA
ATAGTCTGTGTTTCAGAATGGGTACATTGATATTTTAGCCTGTAGTGGGGAGATAGGTTGTTCC
ATAGACTTATATCTCTTCCCTGTTGTTTTATCTGTTATTTTATAATACAAAAGAAACTGCTCCT
CGTGGGACCCTTTGGATTTAGCATCATCTTTTCATGTTAGTTTCCCAGTTTGAAACTGTGGTAG
CTAAGTAGACTTTCCCTTGCAGCGATTCAGGTTTGTTTTGTTTTCATCTATCAATATGCACATA
GTTGTCACAAAATCAGTTAGCCTTCAAGGTCTTGGCTTCGTGCTTCTTAAACATTTCCTGTGAA
ACACGTATTTGGTCCAGAGGCTGTGGGATGCCTGTGCATAGGTACTGCATGTGGCAGCAGTGAT
TGGCCTGCATTTGACTTCAGCACATGAAATTACCTCTAGAAATAGAAGTTTGAAGGATTATAGC
ATGTCCAGGAATTAACCAGTGAATTTAAAGCAAGAATATGCTTGAGAATATTCCCTACCGTGCC
ATGCTGTATGATATTCCCTGTCTGCTGTATGGTATTCCCTATCTGCTGTATGATATTCCCTATC
TGCTGTATGGTATTCCCTATCCTGCCATGCTGTATGTTCTTTCTTTGTGGGGATTTAAAAAGAC
CAAAAAAATTTTTTTGGCCATGTTGGTCTTGAGTCAAAGCAAGATGCAGGATGAAGGCTCCCAC
CTGCTCCCCTGGCTACCTGCTCACCCCTGGCTCTATCAGAATTAGGGGCCTCTCTCAGCTGTGC
ACAGCCAGTACCTTCTCCACACTGGATAGTGTTTCATTCAGTTGTCTTTTCTATAAAAAAAAAA
AAAAAGACTTATTTGAGTTTTAGTTATGGGAGGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TATGCACGAGCATGCACGGAAGCCAGTAAGCCACCTGATAATAGGTATGGAGAACCAAGCTCTG
ATCCTGTGGGAGAGCAGTGAGCCTTAACTACGGAGCCATCTCTCCAGTCCTTGTTTTCTATTAA
CAATTTTATTTTTGATCATTCTCGAGTCTTTTAGTGCCATCGCAAGACTTCCTGTCCTTCTGCC
CTTTGCCTTGTTTTCCTGATACTGCCCTATTAGGTGCTGAGTTGCGGAGGTTTGTGTTCATAAA
AGATTCGTTATCTTCTTGTCTACTGTTTCATCTGACTTAGCCAAGGTTGTCTTTTATGGTCTCT
TTCTTTCTCTCTCTCTCCCTCTCCCTCTCTCTCCTTTTCACTTTCCCTTCCTGTAGGAACAAAG
CTGGTGGCTTCCATATCTATTTCCTGTGGCATCCTTGCTGCTTAGAGCAAGCAGTATTGCAGGG
GTTGAAGAAAGCTAAAAAGTCACATTGTTCATAAACTTGCAAGATCCTGAGCTGACAACTGAAA
CATGCCCCTTTCCTTTATTAGGGGAGAGTGGGTTATTGGTAATGATAGCACTGGATACCAGAAA
CACAGGCTGTATTACAACCTGCTAGGGGTCTTGGCACAGGTGTGGGAGATTCTGGGATGTGCAT
CCTATACCACTTTGTAGTGCAGGAAAGTGTTAGATACATCTATCAGCACAAAACATAGAAGAAT
AAAGTATATTGCTGGTATGTGAAGGCTCCTATTGAAATATAAGTACTGAGAGTGCTGACTGCCA
GAATGTGGATTTATGGGAAATAAAGCCCTAAAATACTTTCTCCAACAACAACAAAAATATAGAC
CTCTTGGAAACAGCTTTTCCTCTCTGTGTACTTAGCTCCCATTGAGCTTAAATTGCTCTCAGTA
TTGGGATAATGACAATTCGATAATACAGGATGTGGAAGACAAACCAAATAAATTAACCAGCTGC
TTTTAAGGCTAGTTCGTTCAATGACTTATCCCTAAAATGCTTTGTAGAACACTCGTGCTCAGTA
GGTCTCTAGGCAGGTTTATGACTAGGAGAAAGAAATGGATTTTATTAAATGTCAGTGAAATCAG
GGCAGATAGCTTTGTGGTACTTAAATTAGTGCAGAATGTGTGTAAGAAAAGTCATTTATATTTT
TCTAAATCATCAGTGCAGAACTTTCTTTGGCATTTCTGCTAGAAAACATGTTTCTACTCAAAAT
TCCCATAGATTAGTATAAATTCGTAAATGGAAAGTGCACCAGTTGATAATGGTCTCCTTCATGA
AGTGCTGTGTCCCCTAGAGCAAGCCCCACAGAAGGACAATGACTGGCAGACATGTGAAGTTGAA
TACCATGTAAAGCTTAGAAGCCCAAACTCGTGTGTTAGGAATAAGGGCAGGGGAAGAGGCTTGA
AAGGAACTGCTGAGGAACCGGGGACACGATGCAAGGGAAGAGCTGCTTAGGTGCAGAGAGCCAG
AGAAAAGAATGCCATCACGTCTAGAGAGCCAAAGAGAACACGTCTGTGTCCTCATTGAAAAGAT
CATCAGCTACTTACATGGAGCAAGGGAAGTCTGACATTAAAAGGAGTTTTCAAAATTGTGATAA
GCTTTGTAAAAGTTACATGTTCTGCCCTTGAGGAATGGGCAGTAGCCTGCCGTTGTGGGAGCTG
GAAATGAGCTAAATAGAGTCCCTTTTGACAGAGATGTGTTAACTGTATCCATGTATACAGTATA
GTCTTTGAAACATTAGGAAATACAGGTTGGTTATACAAGCCATTATATAGCTCTACCAGTTGCA
AACACATTATCTATTAACAATGAGAGGAGTACTAAGAGTAGCTCTCAGGCAGCCTACTTCCTAT
CTCCCTGTTCATCTTGCCCAAATGCCTAGCAAAGTAAAAGGTGTGGTCCTTTCTCTAGCAGGTA
GAAGGAAGGAAGCTCAGATGATAGCCAGACCCAGTGAAGAGGGTACCTTAACCGGACCTTGGTG
CTGTGATTGGACCAACAGGATTGTAAAGCATATACCAGGACCAAGCAATTGGAGAGACATGACT
TACAGAAGAATGCTTGCTTCTTTACAGATAATTCATTTTTATTTACAAAAAGTAGTAGTGATGT
GTTTAAAACTATTGTTTTGAGAACCATCCAAAGACAAATCACATTTAAATTATAGTGGTAAATA
GTTTAAAATGTTTCCTTCATTTAGTGAAGTTAGCTTGTTTACTTTTTTGGGTTTCAGCCTGGTT
CTGTTTTTCCAGTGCCTGGGACTTTCTGTCTTTACGAAACCCTCACTGAGGATCTTTGCTCTCC
CTGTTGCGTGTTACACAGATGCTACAGGTCTGAACCAAAGCTGACATGGACTGACATCTGAGTT
CTGGTCTCCTTCCTTCTCTTCCTGCCAGAACTCCTGGAAGCAGAACAGGACAAAGGGAAGCTAG
GACCCTGCTGGCCTCAGTTTCCTCTGCTGCTGCTGTTTGAACGGACCTGGATGAACAGATGGAA
GTCTTCTGTGCTACACGAAGGGGAAGGAAACATAAGGAGTGTGAAGTGGAGAGGCCATCTGATT
GCTTGGGCCAACAATATGGGTGTGAAGGTTTTTGACATCACCTCAAAGCAAAGAATCAGCAATG
TGCCCCGAGATGACATAAGTCTTCGCCCAGACATGTACCCCTGCAGCCTCTGCTGGAAGGACAA
TGTGACACTCATTATTGGCTGGGGAACTTCCATCAAGATATGCTCAGTGAAGGAACGCCACGCC
AGTGAGATGAGGGATCTGCCAAGCCGATATGTTGAGATAGTGTCTCAGTTTGAAACTGAATTCT
ACATTAGTGGACTTGCACCTCTCTGTGATCAGCTTGTTGTACTTTCCTACGTAAAGGAGGTTTC
AGAAAAAACGGAAAGAGAATACTGTGCAAGACCTAGACTGGACATCATCCAGCCACTTCCGGAG
ACTTGTGAAGAGATCTCCTCCGATGCTTTGACAGTCAGAGGCTTTCAGGAGAATGAATGTAGGG
ATTACCACTTAGAATACTCCGAGGGGGAATCACTCTTCTATGTCGTGAGTCCAAGAGATGTCGT
CGTAGCCAAGGAACGAGACCAGGATGATCACATCGATTGGCTCCTTGAGAAGAAGAAATATGAA
GAAGCTTTGATGGCTGCTGAAATTAGCCAAAGGAACATTAAACGACATAAGATTCTGGATATTG
GGTTGGCATATGTAAACCACCTGGTGGAGAGAGGAGAGTACGACATGGCTGCAAGAAAATGCCA
GAAAATTCTTGGGAAAAATGCATCCCTCTGGGAATACGAAGTTTACAAATTTAAAGAAATTGGG
CAGCTTAAAGCAATTAGTCCCTATTTACCTCGAGGGGACCCAGTTCTGAAACCACTCATCTATG
AAATGATTTTGCACGAATTTCTGGAAAGTGACTATGAGGGCTTTGCCACATTGATCAGAGAGTG
GCCTGGAGATCTATATAACAATTCCGTGATAGTTCAGGCAGTTCGAGACCACCTGAAGAAGGAC
AGTCAGAACAAAACGTTATTGAAAACACTGGCAGAATTGTACACCTATGACAAAAATTATGGCA
ATGCTCTGGAAATATACTTAACGTTAAGACATAAAGATGTTTTCCAACTGATACACAAGCATAA
TCTTTTCAGCTCCATCAAGGATAAAATTGTGTTATTAATGGATTTTGATTCAGAGAAAGCTGTT
GACATGCTTTTGGACAATGAAGATAAAATTTCAATTAAAAAAGTGGTAGAAGAATTAGAAGACA
GACCAGAACTGCAGCATGTGTATTTGCACAAGCTCTTCAAGAGAGACCATCATAAGGGACAGCG
CTACCATGAAAAGCAGATCAGTCTGTATGCCGAGTATGACCGACCAAACCTGCTTCCCTTTCTC
CGAGACAGTACCCATTGCCCACTTGAAAAGGCACTTGAGATCTGTCAACAAAGAAACTTTGTAG
AAGAGACAGTTTACCTTCTGAGCCGAATGGGAAACAGTAGAAGTGCCCTCAAGATGATTATGGA
GGAATTGCATGATGTTGATAAAGCAATTGAGTTTGCCAAGGAACAAGATGATGGAGAGCTCTGG
GAAGATCTGATTCTATACTCCATCGACAAACCACCATTTATCACTGGCTTGTTGAACAACATTG
GCACACATGTGGACCCGATTCTACTTATCCACCGAATTAAGGAAGGAATGGAGATTCCCAATTT
GAGAGATTCCTTGGTTAAAATTCTGCAAGATTATAACTTGCAGATTCTGCTTCGAGAAGGCTGC
AAGAAAATCCTCGTAGCTGACTCATTGTCGTTGCTGAAAAAAATGCACCGAACCCAAATGAAAG
GCGTTCTGGTTGATGAAGAGAATATCTGTGAATCATGCCTTTCTCCCATCCTCCCAACAGATGC
AGCGAAGCCCTTCAGCGTGGTGGTCTTCCACTGCCGGCACATGTTCCACAAGGAGTGCCTGCCT
ATGCCGAGCATGAATGCTCCTGCACAATACTGCAACATCTGTAGTGCTAAGAACCGTGGGCCTG
GAAGTGCCATCCTGGAGATGAAGAAGTAGGCCTGCCTGCCTGCCCACCCTTTGCCACTCTCCAC
TGAGTGACTGCTGGACCACAGCAGCTGTGTCAACGCCAGTGCTGTTGAGTGACGTGTTCAGGGC
TCCTCGGAGCTCCCCGTCAGTTGTTTTCTCCAGACCTTCCTTCCAGAAGCTGCTCCTTGTCACC
GATGGAGAAGTCGAAGCTCTTCCCATGCCATGAAATATTGCATTGCTAATCAGTATTTCATGAT
TTGTTTATTTGGCTTATTTAGTTAGCAAAAGAGTTCAAAGTGACTTCGTTATACCCTAGTTACA
CCCACCAGGCATGAACTGCACTACTGAGAACACTGCCAGCTACAGTCGGCCAAAAGTTCTGCTG
GTAACAGTTCTGGCATGCCTGGCTACACTGTTTGTCATCAGCTGTGGGTAGCCTCCTAAAGCGC
ATTTAGAGGTAAAAATTAAAATTAAAGGTAAAATGCTGAGAACTGACACTCCTTCAGTGACATG
TGGGAAGACCATTAGCTGGGGTACTATAGCCTTATGTTTGCTACCTACGCGCTGACTAGCTCAG
TTATCTGCCCCATCAGGTCATCAATATTTGTTGAATGAATAAATGTTGCCCTTCTCATTGTGAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_742118	(Get FASTA)	NCBI Sequence Viewer
	XP_006516704	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH23243	(Get FASTA)	NCBI Sequence Viewer
	AAH49916	(Get FASTA)	NCBI Sequence Viewer
	AAH57905	(Get FASTA)	NCBI Sequence Viewer
	AAI19363	(Get FASTA)	NCBI Sequence Viewer
	AAI25300	(Get FASTA)	NCBI Sequence Viewer
	AAN73032	(Get FASTA)	NCBI Sequence Viewer
	BAC34707	(Get FASTA)	NCBI Sequence Viewer
	BAD88410	(Get FASTA)	NCBI Sequence Viewer
	BAE36792	(Get FASTA)	NCBI Sequence Viewer
	BAE37664	(Get FASTA)	NCBI Sequence Viewer
	EDL32706	(Get FASTA)	NCBI Sequence Viewer
	EDL32707	(Get FASTA)	NCBI Sequence Viewer
	EDL32708	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000072729
	ENSMUSP00000072729.5
GenBank Protein	Q5KU39	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_742118 ⟸ NM_172120

- UniProtKB:

Q8CG01 (UniProtKB/Swiss-Prot), Q8BKK6 (UniProtKB/Swiss-Prot), Q80V99 (UniProtKB/Swiss-Prot), Q3TPS1 (UniProtKB/Swiss-Prot), Q05AE9 (UniProtKB/Swiss-Prot), Q8CJC3 (UniProtKB/Swiss-Prot), Q5KU39 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MAEAEEQETESLEESTDESEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYG
KVYLLDVQGNITQKFDVSPVKINQISLDDSGEHMGVCSEDGKLQVFGLYSGEEFHETFDCPIKI
IAVHPQFVRSSCKQFVTGGKKLLLFERTWMNRWKSSVLHEGEGNIRSVKWRGHLIAWANNMGVK
VFDITSKQRISNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSIKICSVKERHASEMRDLPSR
YVEIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCARPRLDIIQPLPETCEEISSDA
LTVRGFQENECRDYHLEYSEGESLFYVVSPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEIS
QRNIKRHKILDIGLAYVNHLVERGEYDMAARKCQKILGKNASLWEYEVYKFKEIGQLKAISPYL
PRGDPVLKPLIYEMILHEFLESDYEGFATLIREWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKT
LAELYTYDKNYGNALEIYLTLRHKDVFQLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDK
ISIKKVVEELEDRPELQHVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLE
KALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSID
KPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSL
SLLKKMHRTQMKGVLVDEENICESCLSPILPTDAAKPFSVVVFHCRHMFHKECLPMPSMNAPAQ
YCNICSAKNRGPGSAILEMKK

hide sequence

RefSeq Acc Id:	XP_006516704 ⟸ XM_006516641
- Peptide Label:	isoform X1
- UniProtKB:	Q3TS83 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNRWKSSVLHEGEGNIRSVKWRGHLIAWANNMGVKVFDITSKQRISNVPRDDISLRPDMYPCSL CWKDNVTLIIGWGTSIKICSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSY VKEVSEKTEREYCARPRLDIIQPLPETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYVVS PRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISQRNIKRHKILDIGLAYVNHLVERGEYDMA ARKCQKILGKNASLWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFAT LIREWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALEIYLTLRHKDVFQL IHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHKLFKRDH HKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSAL KMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGM EIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMKGVLVDEENICESCLSPI LPTDAAKPFSVVVFHCRHMFHKECLPMPSMNAPAQYCNICSAKNRGPGSAILEMKK hide sequence

RefSeq Acc Id:

ENSMUSP00000072729 ⟸ ENSMUST00000072961

Protein Domains

RING-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5KU39-F1-model_v2	AlphaFold	Q5KU39	1-853	view protein structure

Promoters

RGD ID:

8679648

Promoter ID:

EPDNEW_M17855

Type:

multiple initiation site

Name:

Vps41_1

Description:

Mus musculus VPS41 HOPS complex subunit , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	13	18,717,300 - 18,717,360	EPDNEW

RGD ID:

6824478

Promoter ID:

MM_KWN:13315

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day2, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Liver, Lung, MEF_B4, MEF_B6

Transcripts:

NM_172120

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	13	18,809,011 - 18,809,511 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1929215	AgrOrtholog
Ensembl Genes	ENSMUSG00000041236	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000072961	ENTREZGENE
	ENSMUST00000072961.6	UniProtKB/Swiss-Prot
Gene3D-CATH	1.25.40.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	2.130.10.10	UniProtKB/Swiss-Prot
InterPro	Clathrin_H-chain/VPS_repeat	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TPR-like_helical_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	VPS41	UniProtKB/Swiss-Prot
	Vps41/Vps8	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	WD40/YVTN_repeat-like_dom_sf	UniProtKB/Swiss-Prot
	WD40_repeat_dom_sf	UniProtKB/Swiss-Prot
	Znf_RING	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:218035	UniProtKB/Swiss-Prot
MGD	MGI:1929215	ENTREZGENE
NCBI Gene	218035	ENTREZGENE
PANTHER	PTHR12616	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 41 HOMOLOG	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Clathrin	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Vps41	PhenoGen
PIRSF	VPS41	UniProtKB/Swiss-Prot
PROSITE	CHCR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ZF_RING_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	CLH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	RING/U-box	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF50978	UniProtKB/Swiss-Prot
UniProt	Q05AE9	ENTREZGENE
	Q3TPS1	ENTREZGENE
	Q3TS83	ENTREZGENE, UniProtKB/TrEMBL
	Q5KU39	ENTREZGENE
	Q6PES1_MOUSE	UniProtKB/TrEMBL
	Q80V99	ENTREZGENE
	Q8BKK6	ENTREZGENE
	Q8CG01	ENTREZGENE
	Q8CJC3	ENTREZGENE
	VPS41_MOUSE	UniProtKB/Swiss-Prot
UniProt Secondary	Q05AE9	UniProtKB/Swiss-Prot
	Q3TPS1	UniProtKB/Swiss-Prot
	Q80V99	UniProtKB/Swiss-Prot
	Q8BKK6	UniProtKB/Swiss-Prot
	Q8CG01	UniProtKB/Swiss-Prot
	Q8CJC3	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-03-21	Vps41	VPS41 HOPS complex subunit		vacuolar protein sorting 41 (yeast)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

Mammalian Phenotype

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

Mammalian Phenotype