Or4k36 (olfactory receptor family 4 subfamily K member 36) - Rat Genome Database

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Gene: Or4k36 (olfactory receptor family 4 subfamily K member 36) Mus musculus
Analyze
No known orthologs.
Symbol: Or4k36
Name: olfactory receptor family 4 subfamily K member 36
RGD ID: 1553780
MGI Page MGI
Description: Predicted to enable olfactory receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and sensory perception of smell. Predicted to be located in membrane. Predicted to be active in plasma membrane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: GA_x6K02T2Q125-72366920-72367837; MOR248; MOR248-1; olfactory receptor 1280; olfactory receptor MOR248-1; Olfr1280
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392111,144,295 - 111,204,476 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2111,144,362 - 111,156,348 (+)EnsemblGRCm39 Ensembl
GRCm382111,313,950 - 111,374,131 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2111,314,017 - 111,326,003 (+)EnsemblGRCm38mm10GRCm38
MGSCv372111,155,638 - 111,156,555 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362111,116,320 - 111,117,237 (+)NCBIMGSCv36mm8
Celera2112,471,626 - 112,472,543 (+)NCBICelera
Cytogenetic Map2E3NCBI
cM Map256.75NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
Additional References at PubMed
PMID:11802173   PMID:11875048   PMID:12477932   PMID:14611657   PMID:19474196   PMID:21873635   PMID:32295537  


Genomics

Variants

.
Variants in Or4k36
2034 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:19
Count of miRNA genes:19
Interacting mature miRNAs:19
Transcripts:ENSMUST00000090328
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
1301109Dntcs2_mdental caries susceptibility 2 (mouse)Not determined240885493114910165Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245347635145312647Mouse
1357577Trmq3_mT cell ratio modifier QTL 3 (mouse)Not determined260520612119355518Mouse
13824983Vclq1_mcurvilinear velocity QTL 1 (mouse)261830344136841920Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
4142088Parms1_mpatched associated RMS 1 (mouse)Not determined74524117114123532Mouse
11528549Sluc31_msusceptibility to lung cancer 31 (mouse)274524117129213005Mouse
10043894Bw22_mbody weight QTL 22 (mouse)Not determined280895334114895334Mouse
15092054Egrme5_mearly growth rate, maternal effect 5 (mouse)282190187118004745Mouse
1558901Skmw8_mskeletal muscle weight 8 (mouse)Not determined284008488118008593Mouse
4141155Plast2b_mplasma plant sterol 2b (mouse)Not determined284013198148522175Mouse
10412082Hylaq1_mHyperlocomotor activity related QTL 1 (mouse)Not determined284013198148667470Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
11049565Lmr28g_mleishmaniasis resistance 28g (mouse)286095716120095823Mouse
11038697Ltpr2d_mLeishmania tropica response 2d (mouse)286095716120095823Mouse
11038698Ltpr2c_mLeishmania tropica response 2c (mouse)286095716120095823Mouse
1300852Lmr14_mleishmaniasis resistance 14 (mouse)Not determined286095716120095823Mouse
1301834Bits1_mbitterness sensitivity 1 (mouse)Not determined287440643121440778Mouse
11532731Sluc31a_msusceptibility to lung cancer 31a (mouse)288015003122015170Mouse
4142223Femwf4_mfemur work to failure 4 (mouse)Not determined88143423122143570Mouse
1301098Cd8mts3_mCD8 memory T cell subset 3 (mouse)Not determined291089974125090104Mouse
1301909Smdq2_msegregation of mitochondrial DNA QTL 2 (mouse)Not determined292778465126778607Mouse
27226761Feml18_mfemur length 18, 16 week (mouse)294230345154241920Mouse
4141448Mpaps1_mmicrophthalmia anophthalmia susceptibility 1 (mouse)Not determined97028557112115196Mouse
11049569Lmr28d_mleishmaniasis resistance 28d (mouse)297123370131123532Mouse
11049568Lmr28c_mleishmaniasis resistance 28c (mouse)297123370131123532Mouse
12904935Edlmmq2_mextensor digitorum longus muscle mass QTL 2 (mouse)297210364131210364Mouse
12904954Gmmq2_mgastrocnemius muscle mass QTL 2 (mouse)297210364131210364Mouse
4141802Ignpq1_mIgA nephropathy QTL 1 (mouse)Not determined2100824060134824269Mouse
1302203Gvhd3_mgraft-versus host disease 3 (mouse)Not determined2100942930134943090Mouse
1301330Tbbmd2_mtotal body bone mineral density 2 (mouse)Not determined2100942930134943090Mouse
1302071Fembrs1_mfemur breaking strength 1 (mouse)Not determined2100942930134943090Mouse
27226788Feml13_mfemur length 13, 10 week (mouse)2102630345159941920Mouse
11041906Lmr28a_mleishmaniasis resistance 28a (mouse)2103095716129213005Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
1301825Pbrgcsf1_mperipheral blood stem cell response to granulocyte colony stimulating factor 1 (mouse)Not determined2106233580140233729Mouse
10043875Bw25_mbody weight QTL 25 (mouse)Not determined2107255676141255676Mouse
1301087Bbaa15_mB.burgdorferi-associated arthritis 15 (mouse)Not determined2110489658144489807Mouse
10045885Cplaq15_mcircadian period of locomotor activity 15 (mouse)Not determined2110916118154354667Mouse
1558990Skmw9_mskeletal muscle weight 9 (mouse)Not determined2111173704145173821Mouse
1300793Pcfm2_mperiosteal circumference and femur length 2 (mouse)Not determined2111173704145173821Mouse
1301905Lgth2_mbody length 2 (mouse)Not determined2111173704145173821Mouse
1301755Hrq1_mheart rate quantitative locus 1 (mouse)Not determined2111173704145173821Mouse

Markers in Region
UniSTS:491739  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382111,315,438 - 111,316,440UniSTSGRCm38
MGSCv372111,155,595 - 111,156,597UniSTSGRCm37
Celera2112,471,583 - 112,472,585UniSTS
Cytogenetic Map2E3UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000082167   ⟹   ENSMUSP00000080805
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2111,145,783 - 111,146,785 (+)Ensembl
GRCm38.p6 Ensembl2111,315,438 - 111,316,440 (+)Ensembl
RefSeq Acc Id: ENSMUST00000213551   ⟹   ENSMUSP00000148875
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2111,144,362 - 111,156,348 (+)Ensembl
GRCm38.p6 Ensembl2111,314,017 - 111,326,003 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219291   ⟹   ENSMUSP00000151980
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2111,144,362 - 111,152,505 (+)Ensembl
GRCm38.p6 Ensembl2111,314,017 - 111,322,160 (+)Ensembl
RefSeq Acc Id: NM_146908   ⟹   NP_667119
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392111,145,826 - 111,146,743 (+)NCBI
GRCm382111,315,481 - 111,316,398 (+)NCBI
MGSCv372111,155,638 - 111,156,555 (+)RGD
Celera2112,471,626 - 112,472,543 (+)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006499567   ⟹   XP_006499630
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392111,144,295 - 111,146,779 (+)NCBI
GRCm382111,313,950 - 111,316,434 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001782758
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392111,144,295 - 111,204,476 (+)NCBI
GRCm382111,313,950 - 111,374,131 (+)NCBI
Sequence:
RefSeq Acc Id: XR_866283
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392111,150,316 - 111,204,476 (+)NCBI
GRCm382111,319,971 - 111,374,131 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_667119   ⟸   NM_146908
- UniProtKB: Q8VGG8 (UniProtKB/TrEMBL),   A0A0N4SWF1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006499630   ⟸   XM_006499567
- Peptide Label: isoform X1
- UniProtKB: Q8VGG8 (UniProtKB/TrEMBL),   A0A0N4SWF1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000151980   ⟸   ENSMUST00000219291
RefSeq Acc Id: ENSMUSP00000148875   ⟸   ENSMUST00000213551
RefSeq Acc Id: ENSMUSP00000080805   ⟸   ENSMUST00000082167
Protein Domains
G-protein coupled receptors family 1 profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8VGG8-F1-model_v2 AlphaFold Q8VGG8 1-305 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3031114 AgrOrtholog
Ensembl Genes ENSMUSG00000068645
  ENSMUSG00000109449 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000082167 ENTREZGENE
  ENSMUST00000082167.5 UniProtKB/TrEMBL
  ENSMUST00000213551.2 UniProtKB/TrEMBL
  ENSMUST00000219291 ENTREZGENE
  ENSMUST00000219291.2 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro 7TM_GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_supfam UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report mmu:258910 UniProtKB/TrEMBL
MGD MGI:3031114 ENTREZGENE
NCBI Gene 258910 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PhenoGen Or4k36 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A0N4SWF1 ENTREZGENE
  Q8VGG8 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A0N4SWF1 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-05-24 Or4k36  olfactory receptor family 4 subfamily K member 36  Olfr1280  olfactory receptor 1280  Symbol and/or name change 5135510 APPROVED