Zfp668 (zinc finger protein 668) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Zfp668 (zinc finger protein 668) Mus musculus
Analyze
Symbol: Zfp668
Name: zinc finger protein 668
RGD ID: 1553685
MGI Page MGI
Description: Enables DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in negative regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is expressed in several structures, including central nervous system; early conceptus; and genitourinary system. Orthologous to human ZNF668 (zinc finger protein 668).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: BC030314; E130018B19Rik; MGC40890; Znf668
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397127,460,197 - 127,476,008 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7127,462,219 - 127,476,000 (-)EnsemblGRCm39 Ensembl
GRCm387127,861,025 - 127,876,836 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7127,863,047 - 127,876,828 (-)EnsemblGRCm38mm10GRCm38
MGSCv377135,008,873 - 135,020,337 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367127,656,507 - 127,667,971 (-)NCBIMGSCv36mm8
Celera7127,700,354 - 127,711,818 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.79NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15489334   PMID:15539151   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:17967808   PMID:18287559   PMID:18799693   PMID:20059953   PMID:20412781   PMID:21267068   PMID:21677750   PMID:21873635  


Genomics

Comparative Map Data
Zfp668
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397127,460,197 - 127,476,008 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7127,462,219 - 127,476,000 (-)EnsemblGRCm39 Ensembl
GRCm387127,861,025 - 127,876,836 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7127,863,047 - 127,876,828 (-)EnsemblGRCm38mm10GRCm38
MGSCv377135,008,873 - 135,020,337 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367127,656,507 - 127,667,971 (-)NCBIMGSCv36mm8
Celera7127,700,354 - 127,711,818 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.79NCBI
ZNF668
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381631,060,847 - 31,074,240 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1631,060,843 - 31,074,240 (-)EnsemblGRCh38hg38GRCh38
GRCh371631,072,168 - 31,085,561 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361630,979,672 - 30,993,005 (-)NCBINCBI36Build 36hg18NCBI36
Celera1629,211,862 - 29,225,335 (+)NCBICelera
Cytogenetic Map16p11.2NCBI
HuRef1628,633,854 - 28,647,340 (-)NCBIHuRef
CHM1_11632,389,459 - 32,402,942 (-)NCBICHM1_1
T2T-CHM13v2.01631,448,267 - 31,461,668 (-)NCBIT2T-CHM13v2.0
Zfp668
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81191,905,112 - 191,915,436 (-)NCBIGRCr8
mRatBN7.21182,474,633 - 182,484,957 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1182,474,633 - 182,492,878 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1190,825,175 - 190,834,974 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01198,011,270 - 198,021,069 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01190,681,673 - 190,691,469 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01199,310,935 - 199,321,231 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1199,310,935 - 199,320,727 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01206,333,359 - 206,343,642 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41187,148,888 - 187,158,687 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11187,299,878 - 187,302,104 (-)NCBI
Celera1180,125,759 - 180,135,373 (-)NCBICelera
Cytogenetic Map1q37NCBI
Znf668
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554937,902,527 - 7,905,135 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554937,902,527 - 7,911,616 (-)NCBIChiLan1.0ChiLan1.0
ZNF668
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21834,268,367 - 34,281,300 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11639,069,774 - 39,082,702 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01623,893,617 - 23,906,552 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11631,429,002 - 31,443,072 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1631,425,412 - 31,442,494 (-)Ensemblpanpan1.1panPan2
ZNF668
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1617,157,767 - 17,166,397 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl617,158,384 - 17,166,174 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha618,732,997 - 18,741,757 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0617,288,529 - 17,297,296 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl617,288,824 - 17,297,549 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1617,088,922 - 17,097,681 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0617,007,782 - 17,016,534 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0617,320,167 - 17,328,929 (+)NCBIUU_Cfam_GSD_1.0
Znf668
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344125,324,740 - 125,344,567 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650113,422,989 - 13,426,060 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650113,423,491 - 13,442,329 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF668
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl317,406,273 - 17,416,795 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1317,406,263 - 17,417,115 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2317,737,178 - 17,747,460 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF668
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1527,749,292 - 27,761,905 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl527,749,164 - 27,752,954 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660681,706,070 - 1,718,532 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf668
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478214,116,605 - 14,121,994 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478214,114,438 - 14,125,715 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Zfp668
402 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1024
Count of miRNA genes:444
Interacting mature miRNAs:504
Transcripts:ENSMUST00000054415, ENSMUST00000106261, ENSMUST00000106262, ENSMUST00000106263, ENSMUST00000144721, ENSMUST00000150961
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301447Fembm3_mfemoral bone morphometry 3 (mouse)Not determined7100993261134993342Mouse
1301478Eae26_msusceptibility to experimental allergic encephalomyelitis 26 (mouse)Not determined798164922132165010Mouse
1301590Pbwg3_mpostnatal body weight growth 3 (mouse)Not determined7127311241144995196Mouse
1302032Alcp12_malcohol preference locus 12 (mouse)Not determined7111166122144995196Mouse
1301773Stheal7_msoft tissue heal 7 (mouse)Not determined7119132573144995196Mouse
1301898Alcp14_malcohol preference locus 14 (mouse)Not determined7111166122144995196Mouse
1301903Tlsm1_mthymic lymphoma susceptible 1 (mouse)Not determined7122250663135170901Mouse
1357613Bsbob2_mBSB obesity 2 (mouse)Not determined7122250663128819324Mouse
1300566Sluc8_msusceptibility to lung cancer 8 (mouse)Not determined7127398151144995196Mouse
1300670Sluc19_msusceptibility to lung cancer 19 (mouse)Not determined7111166122144995196Mouse
1300677Bmd9_mbone mineral density 9 (mouse)Not determined7116634089144995196Mouse
1300721Cfbw3_mcystic fibrosis body weight 3 (mouse)Not determined7101693381135693530Mouse
1300747Skts2_mskin tumor susceptibility 2 (mouse)Not determined7112922733144995196Mouse
1357711Adbg1_madult body growth 1 (mouse)Not determined7118693381144398314Mouse
1301105Cfld4_mcystic fibrosis lung disease 4 (mouse)Not determined7101693381135693530Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
1357460Vtbt4_mvertebral trabecular bone trait 4 (mouse)Not determined7101693381135693530Mouse
4142312Nilac4_mnicotine induced locomotor activity 4 (mouse)Not determined7102485219136485380Mouse
5491192Mobq1_mmultigenic obesity QTL 1 (mouse)Not determined7105250663139250811Mouse
10402499Lmr21_mleishmaniasis resistance 21 (mouse)Not determined7110967235144967336Mouse
10412104Tons2_mtongue size 2 (mouse)Not determined799837716133837716Mouse
4142444Femwf5_mfemur work to failure 5 (mouse)Not determined112552248144995196Mouse
4141945Il4ppq_mIL-4 producing potential QTL (mouse)Not determined7124513662128819324Mouse
13524850Asrq7_macoustic startle response 7 (mouse)798394974132394974Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
14700687Civq5_mcerebral infarct volume QTL 5 (mouse)7109707335143707335Mouse
11059562Lmr21b_mleishmaniasis resistance 21b (mouse)7110967235144967336Mouse
11059561Lmr21a_mleishmaniasis resistance 21a (mouse)7117750722127967336Mouse
14700684Civq1_mcerebral infarct volume QTL 1 (mouse)7109707335143707335Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
11039524Tbbr3_mTrypanosoma brucei brucei response 3 (mouse)7100750722134750843Mouse
13524852Asrq7a_macoustic startle response 7a (mouse)7105350008139350008Mouse
15092059Wogrme1_mweek one growth rate, maternal effect 1 (mouse)7117199227134101729Mouse
38501072Stsl7_mSalmonella typhimurium susceptibility locus 7 (mouse)7115699235128501724Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
14700688Civq6_mcerebral infarct volume QTL 6 (mouse)7109707335143707335Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001362189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_146259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006507848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006507850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006507851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017322254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017322256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC149222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK080005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK081436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB612340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000054415   ⟹   ENSMUSP00000056105
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7127,462,219 - 127,476,000 (-)Ensembl
GRCm38.p6 Ensembl7127,863,047 - 127,876,828 (-)Ensembl
RefSeq Acc Id: ENSMUST00000106261   ⟹   ENSMUSP00000101868
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7127,465,165 - 127,474,818 (-)Ensembl
GRCm38.p6 Ensembl7127,865,993 - 127,875,646 (-)Ensembl
RefSeq Acc Id: ENSMUST00000106262   ⟹   ENSMUSP00000101869
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7127,465,165 - 127,475,949 (-)Ensembl
GRCm38.p6 Ensembl7127,865,993 - 127,876,777 (-)Ensembl
RefSeq Acc Id: ENSMUST00000106263   ⟹   ENSMUSP00000101870
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7127,464,889 - 127,475,952 (-)Ensembl
GRCm38.p6 Ensembl7127,865,717 - 127,876,780 (-)Ensembl
RefSeq Acc Id: ENSMUST00000144721   ⟹   ENSMUSP00000116730
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7127,467,213 - 127,474,829 (-)Ensembl
GRCm38.p6 Ensembl7127,868,041 - 127,875,657 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150961
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7127,472,942 - 127,475,306 (-)Ensembl
GRCm38.p6 Ensembl7127,873,770 - 127,876,134 (-)Ensembl
RefSeq Acc Id: NM_001362189   ⟹   NP_001349118
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397127,460,197 - 127,476,008 (-)NCBI
GRCm387127,861,025 - 127,876,836 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001362190   ⟹   NP_001349119
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397127,460,197 - 127,476,008 (-)NCBI
GRCm387127,861,025 - 127,876,836 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001362191   ⟹   NP_001349120
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397127,460,197 - 127,474,814 (-)NCBI
GRCm387127,861,025 - 127,875,642 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001362192   ⟹   NP_001349121
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397127,460,197 - 127,474,814 (-)NCBI
GRCm387127,861,025 - 127,875,642 (-)NCBI
Sequence:
RefSeq Acc Id: NM_146259   ⟹   NP_666371
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397127,460,197 - 127,476,008 (-)NCBI
GRCm387127,861,025 - 127,876,836 (-)NCBI
MGSCv377135,008,873 - 135,020,337 (-)RGD
Celera7127,700,354 - 127,711,818 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006507848   ⟹   XP_006507911
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397127,460,197 - 127,474,853 (-)NCBI
GRCm387127,861,025 - 127,875,755 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006507850   ⟹   XP_006507913
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397127,460,197 - 127,474,804 (-)NCBI
GRCm387127,861,025 - 127,875,755 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006507851   ⟹   XP_006507914
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397127,460,197 - 127,474,845 (-)NCBI
GRCm387127,861,025 - 127,875,755 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017322254   ⟹   XP_017177743
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397127,460,197 - 127,474,804 (-)NCBI
GRCm387127,861,025 - 127,874,758 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017322256   ⟹   XP_017177745
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397127,460,197 - 127,475,312 (-)NCBI
GRCm387127,861,025 - 127,876,136 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030242589   ⟹   XP_030098449
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397127,460,197 - 127,474,804 (-)NCBI
GRCm387127,861,025 - 127,875,755 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036153123   ⟹   XP_036009016
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397127,460,197 - 127,474,804 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036153124   ⟹   XP_036009017
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397127,460,197 - 127,474,860 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_666371   ⟸   NM_146259
- UniProtKB: Q3U7Y5 (UniProtKB/Swiss-Prot),   Q3TEM2 (UniProtKB/Swiss-Prot),   Q8C8B7 (UniProtKB/Swiss-Prot),   Q8K2R5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006507911   ⟸   XM_006507848
- Peptide Label: isoform X1
- UniProtKB: Q3U7Y5 (UniProtKB/Swiss-Prot),   Q3TEM2 (UniProtKB/Swiss-Prot),   Q8C8B7 (UniProtKB/Swiss-Prot),   Q8K2R5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006507913   ⟸   XM_006507850
- Peptide Label: isoform X1
- UniProtKB: Q3U7Y5 (UniProtKB/Swiss-Prot),   Q3TEM2 (UniProtKB/Swiss-Prot),   Q8C8B7 (UniProtKB/Swiss-Prot),   Q8K2R5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006507914   ⟸   XM_006507851
- Peptide Label: isoform X1
- UniProtKB: Q3U7Y5 (UniProtKB/Swiss-Prot),   Q3TEM2 (UniProtKB/Swiss-Prot),   Q8C8B7 (UniProtKB/Swiss-Prot),   Q8K2R5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017177745   ⟸   XM_017322256
- Peptide Label: isoform X1
- UniProtKB: Q3U7Y5 (UniProtKB/Swiss-Prot),   Q3TEM2 (UniProtKB/Swiss-Prot),   Q8C8B7 (UniProtKB/Swiss-Prot),   Q8K2R5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017177743   ⟸   XM_017322254
- Peptide Label: isoform X1
- UniProtKB: Q3U7Y5 (UniProtKB/Swiss-Prot),   Q3TEM2 (UniProtKB/Swiss-Prot),   Q8C8B7 (UniProtKB/Swiss-Prot),   Q8K2R5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001349118   ⟸   NM_001362189
- UniProtKB: Q8K2R5 (UniProtKB/Swiss-Prot),   Q3U7Y5 (UniProtKB/Swiss-Prot),   Q3TEM2 (UniProtKB/Swiss-Prot),   Q8C8B7 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001349119   ⟸   NM_001362190
- UniProtKB: Q8K2R5 (UniProtKB/Swiss-Prot),   Q3U7Y5 (UniProtKB/Swiss-Prot),   Q3TEM2 (UniProtKB/Swiss-Prot),   Q8C8B7 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_030098449   ⟸   XM_030242589
- Peptide Label: isoform X1
- UniProtKB: Q8K2R5 (UniProtKB/Swiss-Prot),   Q3U7Y5 (UniProtKB/Swiss-Prot),   Q3TEM2 (UniProtKB/Swiss-Prot),   Q8C8B7 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001349121   ⟸   NM_001362192
- UniProtKB: Q8K2R5 (UniProtKB/Swiss-Prot),   Q3U7Y5 (UniProtKB/Swiss-Prot),   Q3TEM2 (UniProtKB/Swiss-Prot),   Q8C8B7 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001349120   ⟸   NM_001362191
- UniProtKB: Q8K2R5 (UniProtKB/Swiss-Prot),   Q3U7Y5 (UniProtKB/Swiss-Prot),   Q3TEM2 (UniProtKB/Swiss-Prot),   Q8C8B7 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: ENSMUSP00000116730   ⟸   ENSMUST00000144721
RefSeq Acc Id: ENSMUSP00000056105   ⟸   ENSMUST00000054415
RefSeq Acc Id: ENSMUSP00000101868   ⟸   ENSMUST00000106261
RefSeq Acc Id: ENSMUSP00000101870   ⟸   ENSMUST00000106263
RefSeq Acc Id: ENSMUSP00000101869   ⟸   ENSMUST00000106262
RefSeq Acc Id: XP_036009017   ⟸   XM_036153124
- Peptide Label: isoform X1
- UniProtKB: Q8K2R5 (UniProtKB/Swiss-Prot),   Q3U7Y5 (UniProtKB/Swiss-Prot),   Q3TEM2 (UniProtKB/Swiss-Prot),   Q8C8B7 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_036009016   ⟸   XM_036153123
- Peptide Label: isoform X1
- UniProtKB: Q8K2R5 (UniProtKB/Swiss-Prot),   Q3U7Y5 (UniProtKB/Swiss-Prot),   Q3TEM2 (UniProtKB/Swiss-Prot),   Q8C8B7 (UniProtKB/Swiss-Prot)
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8K2R5-F1-model_v2 AlphaFold Q8K2R5 1-619 view protein structure

Promoters
RGD ID:8665721
Promoter ID:EPDNEW_M10891
Type:single initiation site
Name:Zfp668_2
Description:Mus musculus zinc finger protein 668 , transcript variant 2,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M10892  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm387127,874,969 - 127,875,029EPDNEW
RGD ID:8665723
Promoter ID:EPDNEW_M10892
Type:single initiation site
Name:Zfp668_1
Description:Mus musculus zinc finger protein 668 , transcript variant 2,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M10891  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm387127,876,836 - 127,876,896EPDNEW
RGD ID:6842426
Promoter ID:MM_KWN:52824
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000106261,   ENSMUST00000106262,   ENSMUST00000106263,   OTTMUST00000053859,   OTTMUST00000053863,   OTTMUST00000053864
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367135,018,951 - 135,020,237 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2442943 AgrOrtholog
Ensembl Genes ENSMUSG00000049728 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000054415 ENTREZGENE
  ENSMUST00000054415.12 UniProtKB/Swiss-Prot
  ENSMUST00000106261 ENTREZGENE
  ENSMUST00000106261.8 UniProtKB/Swiss-Prot
  ENSMUST00000106262 ENTREZGENE
  ENSMUST00000106262.2 UniProtKB/Swiss-Prot
  ENSMUST00000106263 ENTREZGENE
  ENSMUST00000106263.8 UniProtKB/Swiss-Prot
  ENSMUST00000144721.2 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Znf_C2H2_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:244219 UniProtKB/Swiss-Prot
MGD MGI:2442943 ENTREZGENE
NCBI Gene 244219 ENTREZGENE
PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN-RELATED UniProtKB/TrEMBL
  TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED UniProtKB/TrEMBL
  ZINC FINGER PROTEIN UniProtKB/Swiss-Prot
  ZINC FINGER PROTEIN 423 UniProtKB/Swiss-Prot
Pfam zf-C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C2H2_6 UniProtKB/Swiss-Prot
PhenoGen Zfp668 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3Z404_MOUSE UniProtKB/TrEMBL
  Q3TEM2 ENTREZGENE
  Q3U7Y5 ENTREZGENE
  Q8C8B7 ENTREZGENE
  Q8K2R5 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q3TEM2 UniProtKB/Swiss-Prot
  Q3U7Y5 UniProtKB/Swiss-Prot
  Q8C8B7 UniProtKB/Swiss-Prot