Ankra2 (ankyrin repeat family A member 2) - Rat Genome Database

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Gene: Ankra2 (ankyrin repeat family A member 2) Mus musculus
Analyze
Symbol: Ankra2
Name: ankyrin repeat family A member 2 (Ensembl:ankyrin repeat, family A (RFXANK-like), 2)
RGD ID: 1552699
MGI Page MGI
Description: Enables histone deacetylase binding activity. Predicted to be involved in regulation of gene expression and regulation of protein-containing complex assembly. Located in cytoplasm; membrane; and nucleus. Orthologous to human ANKRA2 (ankyrin repeat family A member 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1110004M18Rik; AI450635; Ankra; ankyrin repeat family A protein 2; ankyrin repeat, family A (RFXANK-like), 2; AU023827; MGC90650; RFXANK-like protein 2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391398,399,584 - 98,411,262 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1398,399,582 - 98,411,262 (+)EnsemblGRCm39 Ensembl
GRCm381398,263,076 - 98,274,754 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1398,263,074 - 98,274,754 (+)EnsemblGRCm38mm10GRCm38
MGSCv371399,033,197 - 99,043,868 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361399,363,399 - 99,374,070 (+)NCBIMGSCv36mm8
Celera13101,913,404 - 101,924,071 (+)NCBICelera
Cytogenetic Map13D1NCBI
cM Map1351.89NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
3M complex  (ISO)
cytoplasm  (IGI,ISS)
cytoskeleton  (IEA)
cytosol  (ISO)
membrane  (IDA,ISO)
nucleus  (IBA,IGI)
protein-containing complex  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:10965114   PMID:11042159   PMID:11076861   PMID:11095640   PMID:12477932   PMID:15655668   PMID:15782199   PMID:15964851   PMID:16141072  
PMID:16141073   PMID:16236793   PMID:20059953   PMID:20211142   PMID:21267068   PMID:21873635   PMID:34321999  


Genomics

Comparative Map Data
Ankra2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391398,399,584 - 98,411,262 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1398,399,582 - 98,411,262 (+)EnsemblGRCm39 Ensembl
GRCm381398,263,076 - 98,274,754 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1398,263,074 - 98,274,754 (+)EnsemblGRCm38mm10GRCm38
MGSCv371399,033,197 - 99,043,868 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361399,363,399 - 99,374,070 (+)NCBIMGSCv36mm8
Celera13101,913,404 - 101,924,071 (+)NCBICelera
Cytogenetic Map13D1NCBI
cM Map1351.89NCBI
ANKRA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38573,552,190 - 73,565,639 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl573,552,190 - 73,565,667 (-)EnsemblGRCh38hg38GRCh38
GRCh37572,848,015 - 72,861,464 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36572,883,919 - 72,897,254 (-)NCBINCBI36Build 36hg18NCBI36
Build 34572,883,918 - 72,897,254NCBI
Celera568,743,316 - 68,756,798 (-)NCBICelera
Cytogenetic Map5q13.2NCBI
HuRef568,053,527 - 68,067,013 (-)NCBIHuRef
CHM1_1572,280,757 - 72,294,244 (-)NCBICHM1_1
T2T-CHM13v2.0574,033,518 - 74,046,951 (-)NCBIT2T-CHM13v2.0
Ankra2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8231,347,158 - 31,358,002 (+)NCBIGRCr8
mRatBN7.2229,612,867 - 29,623,748 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl229,612,925 - 29,623,730 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx236,670,264 - 36,680,899 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0234,764,617 - 34,775,252 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0229,582,502 - 29,593,137 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X82,407,601 - 82,418,229 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl228,370,373 - 28,381,311 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 EnsemblX82,407,598 - 82,418,425 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X82,381,970 - 82,392,805 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4228,853,907 - 28,864,539 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1228,774,275 - 28,784,904 (+)NCBI
Celera225,651,376 - 25,662,008 (+)NCBICelera
Cytogenetic Map2q12NCBI
Ankra2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542527,035,850 - 27,045,633 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542527,035,850 - 27,045,253 (+)NCBIChiLan1.0ChiLan1.0
ANKRA2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2441,754,478 - 41,767,863 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1539,908,564 - 39,921,497 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0541,753,093 - 41,766,440 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1542,351,611 - 42,364,983 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl542,351,611 - 42,364,983 (+)Ensemblpanpan1.1panPan2
ANKRA2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1256,364,768 - 56,378,092 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl256,365,207 - 56,377,835 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha253,341,048 - 53,354,269 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0256,887,010 - 56,900,250 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl256,887,002 - 56,900,333 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1253,947,425 - 53,960,649 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0254,715,349 - 54,728,574 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0255,606,626 - 55,619,920 (-)NCBIUU_Cfam_GSD_1.0
Ankra2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213187,825,063 - 187,835,154 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365493,023,200 - 3,033,932 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365493,023,519 - 3,033,910 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANKRA2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl282,702,179 - 82,715,345 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1282,702,176 - 82,715,340 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2284,227,163 - 84,240,203 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANKRA2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1467,914,948 - 67,928,156 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl467,914,807 - 67,928,632 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604916,685,205 - 16,698,570 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ankra2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249241,456,259 - 1,466,766 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249241,456,299 - 1,466,858 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ankra2
340 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1021
Count of miRNA genes:451
Interacting mature miRNAs:524
Transcripts:ENSMUST00000022164, ENSMUST00000091356, ENSMUST00000123924, ENSMUST00000150352, ENSMUST00000150916, ENSMUST00000155629
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142147Mvwf4_mmodifier of von Willebrand factor 4 (mouse)Not determined20477612112898424Mouse
4142314Tailaq3_mtail length adjusted QTL 3 (mouse)Not determined55720354112431103Mouse
4140959W10q17_mweight 10 weeks QTL 17 (mouse)Not determined55720354112431103Mouse
4141992W6q16_mweight 6 weeks QTL 16 (mouse)Not determined55720354112431103Mouse
4142241Tailq3_mtail length QTL 3 (mouse)Not determined55720354112431103Mouse
10402414Sgp5_mserum gp70 production 5 (mouse)Not determined1356470456105422186Mouse
1301445Listr2_mlisteriosis resistance 2 (mouse)Not determined1366744601100744746Mouse
1301593Heal8_mwound healing/regeneration 8 (mouse)Not determined1368053999102054119Mouse
14696726Kidrq3_mkidney weight, right QTL 3 (mouse)1368217066102217066Mouse
14747007Mancz11_mmandible centroid size 11 (mouse)1370111284104111284Mouse
4141266Mol3_mmodifier of LPS-response 3 (mouse)Not determined76132600112431103Mouse
12880414V125Dq10_mvitamin D active form serum level QTL 10 (mouse)1378036508112036508Mouse
10043997Bw40_mbody weight QTL 40 (mouse)Not determined1479239045113239162Mouse
10045623Heal18_mwound healing regeneration 18 (mouse)Not determined1379239045113239162Mouse
1558741Ses10_msalmonella enteritidis susceptibility 10 (mouse)Not determined1382739968116740106Mouse
4142465Pbwg17_mpostnatal body weight growth 17 (mouse)Not determined1383876060117876256Mouse
14700691Cisaq1_mcoxsackieviral infection serum ALT QTL 1 (mouse)1386148119120461536Mouse
4140995Fbtq6_mfemoral bone trait QTL 6 (mouse)Not determined1386341617120341758Mouse
4141728Egaq4_mearly growth adjusted QTL 4 (mouse)Not determined87901985112431103Mouse
1300939Hrtfm6_mheart failure modifier 6 (mouse)Not determined1391383692120883175Mouse
1300876Tanidd2_mtally ho associated non-insulin dependednt diabetes mellitus 2 (mouse)Not determined1391965303120883175Mouse
1301142Heal2_mwound healing/regeneration 2 (mouse)Not determined1393875267120883175Mouse
4142338Skmw18_mskeletal muscle weight 18 (mouse)Not determined1394528399120883175Mouse
1558763Gct9_mgranulosa cell tumorigenesis 9 (mouse)Not determined1395036824120883175Mouse
1357468Rplag_mreduced platelet aggregation (mouse)Not determined1395502130120883175Mouse

Markers in Region
AU023827  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381398,273,428 - 98,273,559UniSTSGRCm38
MGSCv371399,043,383 - 99,043,514UniSTSGRCm37
Celera13101,923,586 - 101,923,717UniSTS
Cytogenetic Map13D1UniSTS
Whitehead/MRC_RH13849.97UniSTS
AI450635  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381398,273,540 - 98,273,832UniSTSGRCm38
MGSCv371399,043,495 - 99,043,787UniSTSGRCm37
Celera13101,923,698 - 101,923,990UniSTS
Cytogenetic Map13D1UniSTS
Whitehead/MRC_RH13849.97UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001271388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001271389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001271390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001271391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001271392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_023472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017315580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB221648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC123056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF314031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK054037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK081695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK085830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139343 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC059723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC066113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC079615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE952624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF730624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000022164   ⟹   ENSMUSP00000022164
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1398,399,750 - 98,410,426 (+)Ensembl
GRCm38.p6 Ensembl1398,263,242 - 98,273,918 (+)Ensembl
RefSeq Acc Id: ENSMUST00000091356   ⟹   ENSMUSP00000088915
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1398,399,699 - 98,410,426 (+)Ensembl
GRCm38.p6 Ensembl1398,263,191 - 98,273,918 (+)Ensembl
RefSeq Acc Id: ENSMUST00000123924   ⟹   ENSMUSP00000122701
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1398,399,702 - 98,410,426 (+)Ensembl
GRCm38.p6 Ensembl1398,263,194 - 98,273,918 (+)Ensembl
RefSeq Acc Id: ENSMUST00000150352   ⟹   ENSMUSP00000117508
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1398,399,582 - 98,411,262 (+)Ensembl
GRCm38.p6 Ensembl1398,263,074 - 98,274,754 (+)Ensembl
RefSeq Acc Id: ENSMUST00000150916   ⟹   ENSMUSP00000116590
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1398,399,666 - 98,410,426 (+)Ensembl
GRCm38.p6 Ensembl1398,263,158 - 98,273,918 (+)Ensembl
RefSeq Acc Id: ENSMUST00000155629
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1398,404,938 - 98,407,975 (+)Ensembl
GRCm38.p6 Ensembl1398,268,430 - 98,271,467 (+)Ensembl
RefSeq Acc Id: ENSMUST00000223606
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1398,399,665 - 98,404,225 (+)Ensembl
GRCm38.p6 Ensembl1398,263,157 - 98,267,717 (+)Ensembl
RefSeq Acc Id: ENSMUST00000226100   ⟹   ENSMUSP00000153417
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1398,399,647 - 98,410,426 (+)Ensembl
GRCm38.p6 Ensembl1398,263,139 - 98,273,918 (+)Ensembl
RefSeq Acc Id: NM_001271388   ⟹   NP_001258317
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391398,399,584 - 98,410,426 (+)NCBI
GRCm381398,263,076 - 98,273,918 (+)NCBI
Celera13101,913,238 - 101,924,912 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001271389   ⟹   NP_001258318
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391398,399,584 - 98,411,262 (+)NCBI
GRCm381398,263,076 - 98,274,754 (+)NCBI
Celera13101,913,238 - 101,924,912 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001271390   ⟹   NP_001258319
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391398,399,584 - 98,410,426 (+)NCBI
GRCm381398,263,076 - 98,273,918 (+)NCBI
Celera13101,913,238 - 101,924,912 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001271391   ⟹   NP_001258320
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391398,399,584 - 98,410,426 (+)NCBI
GRCm381398,263,076 - 98,273,918 (+)NCBI
Celera13101,913,238 - 101,924,912 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001271392   ⟹   NP_001258321
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391398,399,584 - 98,410,426 (+)NCBI
GRCm381398,263,076 - 98,273,918 (+)NCBI
Celera13101,913,238 - 101,924,912 (+)NCBI
Sequence:
RefSeq Acc Id: NM_023472   ⟹   NP_075961
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391398,399,584 - 98,410,426 (+)NCBI
GRCm381398,263,076 - 98,273,918 (+)NCBI
MGSCv371399,033,197 - 99,043,868 (+)RGD
Celera13101,913,238 - 101,924,912 (+)NCBI
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_017315580   ⟹   XP_017171069
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391398,399,592 - 98,410,426 (+)NCBI
GRCm381398,263,084 - 98,273,918 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_075961   ⟸   NM_023472
- Peptide Label: isoform d
- UniProtKB: Q99PE2 (UniProtKB/Swiss-Prot),   Q3UTL3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258318   ⟸   NM_001271389
- Peptide Label: isoform b
- UniProtKB: Q6AXE4 (UniProtKB/TrEMBL),   Q3UTL3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258317   ⟸   NM_001271388
- Peptide Label: isoform a
- UniProtKB: Q3UTL3 (UniProtKB/TrEMBL),   Q6NZJ1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258319   ⟸   NM_001271390
- Peptide Label: isoform c
- UniProtKB: Q8C4M9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258320   ⟸   NM_001271391
- Peptide Label: isoform e
- UniProtKB: A0A286YDH7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258321   ⟸   NM_001271392
- Peptide Label: isoform f
- UniProtKB: D3Z4I1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017171069   ⟸   XM_017315580
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSMUSP00000116590   ⟸   ENSMUST00000150916
RefSeq Acc Id: ENSMUSP00000088915   ⟸   ENSMUST00000091356
RefSeq Acc Id: ENSMUSP00000117508   ⟸   ENSMUST00000150352
RefSeq Acc Id: ENSMUSP00000022164   ⟸   ENSMUST00000022164
RefSeq Acc Id: ENSMUSP00000153417   ⟸   ENSMUST00000226100
RefSeq Acc Id: ENSMUSP00000122701   ⟸   ENSMUST00000123924

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99PE2-F1-model_v2 AlphaFold Q99PE2 1-312 view protein structure

Promoters
RGD ID:8681106
Promoter ID:EPDNEW_M18584
Type:initiation region
Name:Ankra2_1
Description:Mus musculus ankyrin repeat, family A (RFXANK-like), 2 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381398,263,143 - 98,263,203EPDNEW
RGD ID:6824474
Promoter ID:MM_KWN:15011
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000091356,   NM_023472,   NM_178918,   OTTMUST00000081142,   UC007RON.1,   UC007ROO.1,   UC007ROS.1,   UC007ROT.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361399,032,831 - 99,033,331 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915808 AgrOrtholog
Ensembl Genes ENSMUSG00000021661 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000022164 ENTREZGENE
  ENSMUST00000022164.16 UniProtKB/Swiss-Prot
  ENSMUST00000091356 ENTREZGENE
  ENSMUST00000091356.11 UniProtKB/TrEMBL
  ENSMUST00000123924 ENTREZGENE
  ENSMUST00000123924.8 UniProtKB/TrEMBL
  ENSMUST00000150352 ENTREZGENE
  ENSMUST00000150352.3 UniProtKB/TrEMBL
  ENSMUST00000150916 ENTREZGENE
  ENSMUST00000150916.9 UniProtKB/TrEMBL
  ENSMUST00000226100 ENTREZGENE
  ENSMUST00000226100.2 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:68558 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1915808 ENTREZGENE
NCBI Gene 68558 ENTREZGENE
PANTHER ANKYRIN REPEAT FAMILY A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANKYRIN REPEAT FAMILY A PROTEIN 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ank UniProtKB/TrEMBL
  Ank_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ankra2 PhenoGen
PRINTS ANKYRIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ANK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A286YDH7 ENTREZGENE, UniProtKB/TrEMBL
  ANRA2_MOUSE UniProtKB/Swiss-Prot
  D3Z4I1 ENTREZGENE, UniProtKB/TrEMBL
  Q3UTL3 ENTREZGENE, UniProtKB/TrEMBL
  Q6AXE4 ENTREZGENE, UniProtKB/TrEMBL
  Q6NZJ1 ENTREZGENE, UniProtKB/TrEMBL
  Q8C4M9 ENTREZGENE, UniProtKB/TrEMBL
  Q8R052_MOUSE UniProtKB/TrEMBL
  Q99PE2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-07-04 Ankra2  ankyrin repeat family A member 2  Ankra2  ankyrin repeat, family A (RFXANK-like), 2  Symbol and/or name change 5135510 APPROVED