Bhlhb9 (basic helix-loop-helix domain containing, class B9)

Gene: Bhlhb9 (basic helix-loop-helix domain containing, class B9) Mus musculus

Analyze

Symbol:

Bhlhb9

Name:

basic helix-loop-helix domain containing, class B9

RGD ID:

1552602

MGI Page

MGI

Description:

Enables protein homodimerization activity. Involved in learning or memory; negative regulation of neuron apoptotic process; and positive regulation of nervous system development. Predicted to be located in cytoplasm. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including central nervous system; sensory organ; skeleton; submandibular gland primordium; and trigeminal nerve. Orthologous to several human genes including GPRASP3 (G protein-coupled receptor associated sorting protein family member 3).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

2700087I09Rik; G protein-coupled receptor associated sorting protein 3; Gprasp3

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	134,742,388 - 134,791,828 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	134,698,343 - 134,791,830 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	135,841,639 - 135,891,081 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	135,797,594 - 135,891,081 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	132,420,390 - 132,425,620 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	131,235,266 - 131,237,439 (+)	NCBI		MGSCv36	mm8
Celera	X	119,202,603 - 119,207,835 (+)	NCBI		Celera
Cytogenetic Map	X	F1	NCBI
cM Map	X	57.31	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

genetic disease (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (EXP)

1,2-dichloroethane (EXP)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,4-dinitrotoluene (ISO)

2,6-dinitrotoluene (ISO)

6-propyl-2-thiouracil (ISO)

acrylamide (ISO)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

azoxystrobin (ISO)

benzo[a]pyrene (EXP,ISO)

bisphenol A (ISO)

C60 fullerene (ISO)

cadmium atom (EXP,ISO)

cadmium dichloride (ISO)

cantharidin (EXP)

CGP 52608 (ISO)

chlorpyrifos (ISO)

choline (EXP)

clofibrate (EXP)

crocidolite asbestos (EXP)

cyclosporin A (EXP,ISO)

dichloroacetic acid (EXP)

dorsomorphin (ISO)

endosulfan (ISO)

ethanol (EXP)

flutamide (ISO)

folic acid (EXP)

formaldehyde (ISO)

gentamycin (ISO)

glyphosate (ISO)

imidacloprid (ISO)

inulin (EXP)

L-methionine (EXP)

methyl methanesulfonate (ISO)

paracetamol (ISO)

perfluorooctane-1-sulfonic acid (EXP)

perfluorooctanoic acid (EXP)

permethrin (EXP)

phenobarbital (EXP)

phenylmercury acetate (ISO)

pirinixic acid (EXP)

SB 431542 (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

testosterone (EXP)

tetrachloromethane (EXP)

thiabendazole (ISO)

thioacetamide (ISO)

titanium dioxide (EXP)

trichostatin A (ISO)

Triptolide (EXP)

tris(2-butoxyethyl) phosphate (ISO)

troglitazone (EXP)

valproic acid (EXP,ISO)

vinclozolin (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

learning or memory (IDA)

negative regulation of neuron apoptotic process (IDA)

positive regulation of dendritic spine morphogenesis (IDA)

positive regulation of neurogenesis (IDA)

positive regulation of synapse assembly (IDA)

Cellular Component

cytoplasm (ISO)

cytosol (IBA)

nucleus (IBA)

Molecular Function

protein binding (ISO)

protein homodimerization activity (IDA)

References

References - curated

#	Reference Title	Reference Citation
1.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	MGDs mouse GO annotations	MGD data from the GO Consortium
3.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Database resources of the National Center for Biotechnology Information.	Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:12477932	PMID:14610273	PMID:15368895	PMID:15747579	PMID:15782199	PMID:16141072	PMID:16141073
PMID:18799693	PMID:20436479	PMID:21199326	PMID:21267068	PMID:21677750	PMID:21873635	PMID:22172954	PMID:23341629	PMID:23391701	PMID:23677977

Genomics

Comparative Map Data

Bhlhb9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	134,742,388 - 134,791,828 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	134,698,343 - 134,791,830 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	135,841,639 - 135,891,081 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	135,797,594 - 135,891,081 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	132,420,390 - 132,425,620 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	131,235,266 - 131,237,439 (+)	NCBI		MGSCv36	mm8
Celera	X	119,202,603 - 119,207,835 (+)	NCBI		Celera
Cytogenetic Map	X	F1	NCBI
cM Map	X	57.31	NCBI

GPRASP3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	102,720,743 - 102,753,540 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	102,720,688 - 102,753,540 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	101,975,671 - 102,008,468 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	101,862,310 - 101,894,024 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	101,781,798 - 101,813,513	NCBI
Celera	X	102,414,680 - 102,446,406 (+)	NCBI		Celera
Cytogenetic Map	X	q22.1	NCBI
HuRef	X	91,641,229 - 91,672,865 (+)	NCBI		HuRef
CHM1_1	X	101,868,307 - 101,900,034 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	101,165,692 - 101,198,489 (+)	NCBI		T2T-CHM13v2.0

Gprasp3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	103,639,366 - 103,644,561 (+)	NCBI		GRCr8
mRatBN7.2	X	98,847,591 - 98,854,949 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	98,817,593 - 98,854,545 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	100,985,493 - 100,988,191 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	104,496,103 - 104,498,801 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	102,047,888 - 102,050,587 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	106,359,981 - 106,393,457 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	106,390,759 - 106,393,459 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	106,726,766 - 106,739,896 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	123,149,086 - 123,151,846 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	X	123,222,518 - 123,225,279 (+)	NCBI
Celera	X	100,291,299 - 100,293,998 (-)	NCBI		Celera
Cytogenetic Map	X	q32	NCBI

Gprasp3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955548	230,525 - 236,043 (+)	NCBI	ChiLan1.0	ChiLan1.0

GPRASP3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	102,327,152 - 102,360,738 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	102,330,757 - 102,363,242 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	91,944,691 - 91,978,289 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	102,324,471 - 102,358,183 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

GPRASP3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	76,635,887 - 76,651,465 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	76,636,667 - 76,638,319 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
ROS_Cfam_1.0	X	77,830,292 - 77,845,859 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	77,695,389 - 77,846,736 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	75,380,346 - 75,395,910 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	77,043,280 - 77,058,840 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	76,753,328 - 76,768,896 (+)	NCBI		UU_Cfam_GSD_1.0

Gprasp3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	62,370,715 - 62,375,944 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936813	1,099,164 - 1,137,974 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GPRASP3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	X	83,895,554 - 83,911,573 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	97,835,521 - 97,851,537 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GPRASP3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	90,695,125 - 90,735,910 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666065	15,532,543 - 15,573,372 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Variants

Variants in Bhlhb9
1235 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	415
Count of miRNA genes:	262
Interacting mature miRNAs:	297
Transcripts:	ENSMUST00000068755, ENSMUST00000148374, ENSMUST00000151989, ENSMUST00000180025
Prediction methods:	Miranda, Pita, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357433	Dbts2_m	diabetes 2 (mouse)			Not determined		X	7226295	150107038	Mouse
13824980	Ferq1_m	genetic fertility QTL 1 (mouse)					X	54045360	148782996	Mouse
4141665	Mhysq2_m	male hybrid sterility QTL 2 (mouse)			Not determined			71453852	139203212	Mouse
13208552	Wght12_m	weight 12 (mouse)					X	94043606	149782996	Mouse
13208556	Lgth14_m	body length 14 (mouse)					X	94043606	149782996	Mouse
1357823	Spha3_m	sperm head anomaly 3 (mouse)			Not determined		X	102055848	162758941	Mouse
1301209	Cia19_m	collagen induced arthritis 19 (mouse)			Not determined		X	120993165	160213038	Mouse
25314309	Syncl5_m	synaptonemal complex length 5 (mouse)					X	121909697	152582996	Mouse
10412164	Cmv2_m	cytomegalovirus resistance 2 (mouse)			Not determined		X	125685149	159685269	Mouse
13824981	Svwq2_m	seminal vesicle weight QTL 2 (mouse)					X	128900749	153782996	Mouse
1558900	Bw3_m	body weight QTL 3 (mouse)			Not determined		X	133540040	165298595	Mouse

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001098222	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_198161	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006528608	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011247760	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036162091	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AK012577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK143861	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK157023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK183392	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK214737	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK214741	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL683822	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BB863588	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC059871	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BP760224	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY272101	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CF729268	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CK625652	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	LXEJ02009303	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000068755 ⟹ ENSMUSP00000068067

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	X	134,786,602 - 134,791,830 (+)	Ensembl
GRCm38.p6 Ensembl	X	135,885,853 - 135,891,081 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000148374 ⟹ ENSMUSP00000121154

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	X	134,786,602 - 134,790,075 (+)	Ensembl
GRCm38.p6 Ensembl	X	135,885,853 - 135,889,326 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000151989

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	X	134,786,732 - 134,788,219 (+)	Ensembl
GRCm38.p6 Ensembl	X	135,885,983 - 135,887,470 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000180025 ⟹ ENSMUSP00000137213

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	X	134,786,600 - 134,791,827 (+)	Ensembl
GRCm38.p6 Ensembl	X	135,885,851 - 135,891,078 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000207433

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	X	134,698,343 - 134,791,613 (+)	Ensembl
GRCm38.p6 Ensembl	X	135,797,594 - 135,890,864 (+)	Ensembl

RefSeq Acc Id:

NM_001098222 ⟹ NP_001091692

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	X	134,786,676 - 134,791,828 (+)	NCBI
GRCm38	X	135,885,851 - 135,891,081 (+)	NCBI
MGSCv37	X	132,420,390 - 132,425,620 (+)	RGD
Celera	X	119,202,603 - 119,207,835 (+)	RGD
cM Map	X		ENTREZGENE

Sequence:

show sequence

GTGCGCAGTATCCCTCCGCCCCCTTCCCGACACCCTCGAGGTGAGCTGTGCTTGCCGCATCCTG
CGCAGCCCCTGCCTGTTTGGTGCAGAGACGTAGGGGCGGGACACGTCTCTGCCATTCCACTCGC
GCGCAAAGCGGTGGGGGTTCTGTGAGAGGATCCGCCGAGGACAGAGACCAGCCGGGAGCAGGAG
GGGGACGCGGGGGAGCCCGGACACCTGGGCCGTGCGCCTGGCCAGGATCCATTTTCTCAACATT
TCACCTTGAACATTTGTTTTAATGTTCGAATGGACTTAAAGTAAAGAAGAACTTTTTGTGCAGG
TCGACTCTTCTCCAGCCAGAGGGAAGAATAGCATCTCCCGAGCATCCTGCTTTGTGTTCTGCTG
CCTTTGAAGTCAGTTGGGTGGCTTTTCATCAGTGGAAGTGAGGAAGGAGGAATTCATCCCATCA
CATCAGCACACTTTAGTGAAGCCTTTCTGAAAACCTGTCTTTCTCCACTGGTAGACTTGGATTG
GGAGAAGATTGCTTTCAACGGGTCTGCCTTTGGAAATCATCGTCTTCTCCCTAACCTGAGTGTG
TCTTTAATTTGTCCCTATCGTTGATAAGAGACTGTATGTCAAAAAAGGGGAATTTCTTAACGAC
TGAAGTGACAGTTGTCTTGGACTCTTTCTGCCAAGTTTATCTCTGACTAAGTTAACAAGTATAA
AGTTTCCAGCCCGGAACAAACAGAGAACTAAGGATAAGACTCGACAGGTGTATATAACTGTGCT
TCAACCATGACTGGTTCAAAGAATAAGGCTAGGGCACAGGCTAAACTAGAAAAAAGGGCAAGTG
CACAAGCCAGAGCTGTGGCAGAGAGGGAGGCTGCTAATGCCAACCGAGGTGCAGGCAAAAGCCG
GGACAAAGGGAAAGGTAAGGCAGGCTCTAAATCAGATGCAGTGGCAGAGGTGAAGGCAGGGTCT
AAGGGAAAGGTAGTTGCTGAGACAAAAGAAGGAGCGAGACCAGAATCTAAGGCTCTAGTAAAAG
GCACCTCAGATTTCAACCATAGGACTGAGAACAAGTTTGCTAGATCCACACGTAAAGATAAGCC
CAGTAGTGATAACTGGTTCTGGGCTGGAGAAGATTCTGGTATTAATTCCTGGTTCTGGAAGGGA
GAAGAGCTTAGTAATAATTCTGTTGCTAAGTGTGAAAATAAACCTAGTACTAGTATCCAGGCTC
GTGCTGAGGAGCCCGCACCTAGGACCAGCCACAAGTCTAGGTCAGGTGCTGAGGAGGAGGAGGA
AGAGAACGTTATTGGGAACTGGTTTTGGGAAGGCGATGACACTGGTTTTGATACTGATCCTAAA
CCTGTGTTCAAAATAGTTAAACCTCAGCCAGTGGATGAAATTAATGAAAAAGATAGGCCAAAGG
ACTGGTCCGAGGTAACTATATGGCCCAAAGCTCCTGCTGTAACTCCAGCAGTGTTAGGTTATAG
ATCCCAGGATTCATCTGAGGCAAGGTCCTCTTCATACATTGTTCTGGCCTCAAATGAAGAGGAA
ACTTCAACAGCCTGTACTAAGAATACTCGTTCAAGCCTACAGTCTATACCTGAGTATCCATTTG
GTTCTGATCCTTGCATCCAGACCTTAGATGAAATTAGACAGCAAATCAAGATCAGAGAAGAGAA
TGGCATCAAGCCCTTCGCTTGCCCTTGCAAACTGGAGTGCTATTTGGATTCTCCAGAATTTGAA
AAGCTTGTTAACATACTTAAGTCAACTACTGATCCTCTTATTCATAAAATAGCACAGATTGCAA
TGGGTATACATAAGGTTCATCCATTTGCCCAGGAATTCATTAATGAAGTGGGCGTGGTGACACT
TATTGAAAGCTTGCTCAGTTTTTCTTCCCCTGAGGTTAGTATTAAAAAGGCTGTGATTACTCTG
AACTCTTCCGGGGATGACAGATACAACAAGGTAGAGTTTCATGTTAAGCATATGTGTAAAGAAA
CTGTGTCCTTCCCCTTGAACTCACCTGGCCAGCAATCTGGATTAAAGATAATAGGGCAGCTGAC
TACCGAGTCTGTCCATCACTACATTGTAGTCAGCTACTTTTCAGAGCTTTTCCATTTGCTGTCT
CAGGGAAATCGTAAGACTAGGAATCTTGTTTTGAAAGTATTTTTGAATATGTCTGAAAATCCCA
AGGCAGCCAGAGATATGATAAATATGAAGGCGTTAGCAGCATTAAAACTCATCTTTAACCAAAA
AGAGGCAAAAGCCAATCTTGTTAGTGCTGTGGCCATCTTTATTAACATAAAGGAGCATATTAGA
AAGGGTTCAATTGTAGTAGTCGATCACTTGAGTTACAATACTCTTACAGCCATATTCCGTGAAG
TTAAGGGGATTATCGAAAGAATGTAAAGTGACCCAGAAATTAAAGAGAACACTGAACAGTGTCC
AAAATTTGATTGGCTGTACATGCCCAAAGAGTTTTGCATAATATTTTGGTAATTACTGCTCACA
CATTTTTGTCTTAACATCTTTTACATATTATTACCTGTGGCAGGTTCTAGCTCAAAGCTAGACC
ATTTTTGATGTATCAAATAAATATTAACATCTTGAGATAAAAAAGTTTATTGATTTCTATCTTA
TCTAGATTAGCAAATTTGTAACATTTTACTTAAGGAAACTGTGATCCAACTCTCAGAAGTACTG
TGTCTTGAGGGTTAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTACT
GCTCTTGTAATCTAGTTACAGAAATAAGGCATACGCAAATAAAGATATCTGATGGTACTTACAA
AAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_198161 ⟹ NP_937804

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	X	134,786,676 - 134,791,828 (+)	NCBI
GRCm38	X	135,885,851 - 135,891,081 (+)	NCBI
MGSCv37	X	132,420,390 - 132,425,620 (+)	RGD
Celera	X	119,202,603 - 119,207,835 (+)	RGD
cM Map	X		ENTREZGENE

Sequence:

show sequence

GTGCGCAGTATCCCTCCGCCCCCTTCCCGACACCCTCGAGGTGAGCTGTGCTTGCCGCATCCTG
CGCAGCCCCTGCCTGTTTGGTGCAGAGACGTAGGGGCGGGACACGTCTCTGCCATTCCACTCGC
GCGCAAAGCGGTGGGGGTTCTGTGAGAGGATCCGCCGAGGACAGAGACCAGCCGGGAGCAGGAG
GGGGACGCGGGGGAGCCCGGACACCTGGGCCGTGCGCCTGGCCAGGCAAGTGGAGGATCCATTT
TCTCAACATTTCACCTTGAACATTTGTTTTAATGTTCGAATGGACTTAAAGTAAAGAAGAACTT
TTTGTGCAGGTCGACTCTTCTCCAGCCAGAGGGAAGAATAGCATCTCCCGAGCATCCTGCTTTG
TGTTCTGCTGCCTTTGAAGTCAGTTGGGTGGCTTTTCATCAGTGGAAGTGAGGAAGGAGGAATT
CATCCCATCACATCAGCACACTTTAGTGAAGCCTTTCTGAAAACCTGTCTTTCTCCACTGGTAG
ACTTGGATTGGGAGAAGATTGCTTTCAACGGGTCTGCCTTTGGAAATCATCGTCTTCTCCCTAA
CCTGAGTGTGTCTTTAATTTGTCCCTATCGTTGATAAGAGACTGTATGTCAAAAAAGGGGAATT
TCTTAACGACTGAAGTGACAGTTGTCTTGGACTCTTTCTGCCAAGTTTATCTCTGACTAAGTTA
ACAAGTATAAAGTTTCCAGCCCGGAACAAACAGAGAACTAAGGATAAGACTCGACAGGTGTATA
TAACTGTGCTTCAACCATGACTGGTTCAAAGAATAAGGCTAGGGCACAGGCTAAACTAGAAAAA
AGGGCAAGTGCACAAGCCAGAGCTGTGGCAGAGAGGGAGGCTGCTAATGCCAACCGAGGTGCAG
GCAAAAGCCGGGACAAAGGGAAAGGTAAGGCAGGCTCTAAATCAGATGCAGTGGCAGAGGTGAA
GGCAGGGTCTAAGGGAAAGGTAGTTGCTGAGACAAAAGAAGGAGCGAGACCAGAATCTAAGGCT
CTAGTAAAAGGCACCTCAGATTTCAACCATAGGACTGAGAACAAGTTTGCTAGATCCACACGTA
AAGATAAGCCCAGTAGTGATAACTGGTTCTGGGCTGGAGAAGATTCTGGTATTAATTCCTGGTT
CTGGAAGGGAGAAGAGCTTAGTAATAATTCTGTTGCTAAGTGTGAAAATAAACCTAGTACTAGT
ATCCAGGCTCGTGCTGAGGAGCCCGCACCTAGGACCAGCCACAAGTCTAGGTCAGGTGCTGAGG
AGGAGGAGGAAGAGAACGTTATTGGGAACTGGTTTTGGGAAGGCGATGACACTGGTTTTGATAC
TGATCCTAAACCTGTGTTCAAAATAGTTAAACCTCAGCCAGTGGATGAAATTAATGAAAAAGAT
AGGCCAAAGGACTGGTCCGAGGTAACTATATGGCCCAAAGCTCCTGCTGTAACTCCAGCAGTGT
TAGGTTATAGATCCCAGGATTCATCTGAGGCAAGGTCCTCTTCATACATTGTTCTGGCCTCAAA
TGAAGAGGAAACTTCAACAGCCTGTACTAAGAATACTCGTTCAAGCCTACAGTCTATACCTGAG
TATCCATTTGGTTCTGATCCTTGCATCCAGACCTTAGATGAAATTAGACAGCAAATCAAGATCA
GAGAAGAGAATGGCATCAAGCCCTTCGCTTGCCCTTGCAAACTGGAGTGCTATTTGGATTCTCC
AGAATTTGAAAAGCTTGTTAACATACTTAAGTCAACTACTGATCCTCTTATTCATAAAATAGCA
CAGATTGCAATGGGTATACATAAGGTTCATCCATTTGCCCAGGAATTCATTAATGAAGTGGGCG
TGGTGACACTTATTGAAAGCTTGCTCAGTTTTTCTTCCCCTGAGGTTAGTATTAAAAAGGCTGT
GATTACTCTGAACTCTTCCGGGGATGACAGATACAACAAGGTAGAGTTTCATGTTAAGCATATG
TGTAAAGAAACTGTGTCCTTCCCCTTGAACTCACCTGGCCAGCAATCTGGATTAAAGATAATAG
GGCAGCTGACTACCGAGTCTGTCCATCACTACATTGTAGTCAGCTACTTTTCAGAGCTTTTCCA
TTTGCTGTCTCAGGGAAATCGTAAGACTAGGAATCTTGTTTTGAAAGTATTTTTGAATATGTCT
GAAAATCCCAAGGCAGCCAGAGATATGATAAATATGAAGGCGTTAGCAGCATTAAAACTCATCT
TTAACCAAAAAGAGGCAAAAGCCAATCTTGTTAGTGCTGTGGCCATCTTTATTAACATAAAGGA
GCATATTAGAAAGGGTTCAATTGTAGTAGTCGATCACTTGAGTTACAATACTCTTACAGCCATA
TTCCGTGAAGTTAAGGGGATTATCGAAAGAATGTAAAGTGACCCAGAAATTAAAGAGAACACTG
AACAGTGTCCAAAATTTGATTGGCTGTACATGCCCAAAGAGTTTTGCATAATATTTTGGTAATT
ACTGCTCACACATTTTTGTCTTAACATCTTTTACATATTATTACCTGTGGCAGGTTCTAGCTCA
AAGCTAGACCATTTTTGATGTATCAAATAAATATTAACATCTTGAGATAAAAAAGTTTATTGAT
TTCTATCTTATCTAGATTAGCAAATTTGTAACATTTTACTTAAGGAAACTGTGATCCAACTCTC
AGAAGTACTGTGTCTTGAGGGTTAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAG
AGAAACTACTGCTCTTGTAATCTAGTTACAGAAATAAGGCATACGCAAATAAAGATATCTGATG
GTACTTACAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006528608 ⟹ XP_006528671

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	X	134,746,680 - 134,791,828 (+)	NCBI
GRCm38	X	135,841,639 - 135,891,079 (+)	NCBI

Sequence:

show sequence

TACAGTTTAAATTGATTACAATGATAGCAGCCATTGGTACATTCTTGTCTTTTCTGAGTAGTCC
CACATATCCTCTGAGTACCAGGAACTCCATGAAGCATTGAGAGAAAAACATGAAGAATCAAGAG
TCCTCTCTGCAGACTGTTGCTAGGCTACCTGTTCCCTCTCTAGCTGCAGTACTAAAAGCCCTCC
TCCCTTTCTACTGGCGTCAGAAGCTACGAGAGAACTGAAGGGTAGCAAGAGATGGAGTGCAGGG
AGGGGCTGGGGGCCAGCAAAGCCCAGCTTCCTACTGAAGTACAGGAGCACTCAGTATCCCTCCG
CTGCTCCCTCCTGTTCCACATCTCCAGACCACCTTCTCTCCATAGTCCCCCTCTCCAAAGCCCT
CATAGACTCTAGATTTCAGCCATCTCACACACTGTTGTGGCACCCCCCCCCCAAAAAAAAGTGG
TGGTGGTCTCTGGTTAGGGTGAACAGGGGTCTGCAGACGCCTACGGGTGCAACCCACCTCTCCA
AGAGGAGTGGGGCTGTCTGGCCCCGCCCACTCCGAGTCGGAACTACAGTGGGTCCAGGAGGGGG
CGTAGAGCCCCGTGCGCAGTATCCCTCCGCCCCCTTCCCGACACCCTCGAGGTGAGCTGTGCTT
GCCGCATCCTGCGCAGCCCCTGCCTGTTTGGTGCAGAGACGTAGGGGCGGGACACGTCTCTGCC
ATTCCACTCGCGCGCAAAGCGGTGGGGGTTCTGTGAGAGGATCCGCCGAGGACAGAGACCAGCC
GGGAGCAGGAGGGGGACGCGGGGGAGCCCGGACACCTGGGCCGTGCGCCTGGCCAGGCAAGTGG
AGGATCCATTTTCTCAACATTTCACCTTGAACATTTGTTTTAATGTTCGAATGGACTTAAAGTA
AAGAAGAACTTTTTGTGCAGGTCGACTCTTCTCCAGCCAGAGGGAAGAATAGCATCTCCCGAGC
ATCCTGCTTTGTGTTCTGCTGCCTTTGAAGTCAGTTGGGTGGCTTTTCATCAGTGGAAGTGAGG
AAGGAGGAATTCATCCCATCACATCAGCACACTTTAGTGAAGCCTTTCTGAAAACCTGTCTTTC
TCCACTGGTAGACTTGGATTGGGAGAAGATTGCTTTCAACGGGTCTGCCTTTGGAAATCATCGT
CTTCTCCCTAACCTGAGTGTGTCTTTAATTTGTCCCTATCGTTGATAAGAGACTGTATGTCAAA
AAAGGGGAATTTCTTAACGACTGAAGTGACAGTTGTCTTGGACTCTTTCTGCCAAGTTTATCTC
TGACTAAGTTAACAAGTATAAAGTTTCCAGCCCGGAACAAACAGAGAACTAAGGATAAGACTCG
ACAGGTGTATATAACTGTGCTTCAACCATGACTGGTTCAAAGAATAAGGCTAGGGCACAGGCTA
AACTAGAAAAAAGGGCAAGTGCACAAGCCAGAGCTGTGGCAGAGAGGGAGGCTGCTAATGCCAA
CCGAGGTGCAGGCAAAAGCCGGGACAAAGGGAAAGGTAAGGCAGGCTCTAAATCAGATGCAGTG
GCAGAGGTGAAGGCAGGGTCTAAGGGAAAGGTAGTTGCTGAGACAAAAGAAGGAGCGAGACCAG
AATCTAAGGCTCTAGTAAAAGGCACCTCAGATTTCAACCATAGGACTGAGAACAAGTTTGCTAG
ATCCACACGTAAAGATAAGCCCAGTAGTGATAACTGGTTCTGGGCTGGAGAAGATTCTGGTATT
AATTCCTGGTTCTGGAAGGGAGAAGAGCTTAGTAATAATTCTGTTGCTAAGTGTGAAAATAAAC
CTAGTACTAGTATCCAGGCTCGTGCTGAGGAGCCCGCACCTAGGACCAGCCACAAGTCTAGGTC
AGGTGCTGAGGAGGAGGAGGAAGAGAACGTTATTGGGAACTGGTTTTGGGAAGGCGATGACACT
GGTTTTGATACTGATCCTAAACCTGTGTTCAAAATAGTTAAACCTCAGCCAGTGGATGAAATTA
ATGAAAAAGATAGGCCAAAGGACTGGTCCGAGGTAACTATATGGCCCAAAGCTCCTGCTGTAAC
TCCAGCAGTGTTAGGTTATAGATCCCAGGATTCATCTGAGGCAAGGTCCTCTTCATACATTGTT
CTGGCCTCAAATGAAGAGGAAACTTCAACAGCCTGTACTAAGAATACTCGTTCAAGCCTACAGT
CTATACCTGAGTATCCATTTGGTTCTGATCCTTGCATCCAGACCTTAGATGAAATTAGACAGCA
AATCAAGATCAGAGAAGAGAATGGCATCAAGCCCTTCGCTTGCCCTTGCAAACTGGAGTGCTAT
TTGGATTCTCCAGAATTTGAAAAGCTTGTTAACATACTTAAGTCAACTACTGATCCTCTTATTC
ATAAAATAGCACAGATTGCAATGGGTATACATAAGGTTCATCCATTTGCCCAGGAATTCATTAA
TGAAGTGGGCGTGGTGACACTTATTGAAAGCTTGCTCAGTTTTTCTTCCCCTGAGGTTAGTATT
AAAAAGGCTGTGATTACTCTGAACTCTTCCGGGGATGACAGATACAACAAGGTAGAGTTTCATG
TTAAGCATATGTGTAAAGAAACTGTGTCCTTCCCCTTGAACTCACCTGGCCAGCAATCTGGATT
AAAGATAATAGGGCAGCTGACTACCGAGTCTGTCCATCACTACATTGTAGTCAGCTACTTTTCA
GAGCTTTTCCATTTGCTGTCTCAGGGAAATCGTAAGACTAGGAATCTTGTTTTGAAAGTATTTT
TGAATATGTCTGAAAATCCCAAGGCAGCCAGAGATATGATAAATATGAAGGCGTTAGCAGCATT
AAAACTCATCTTTAACCAAAAAGAGGCAAAAGCCAATCTTGTTAGTGCTGTGGCCATCTTTATT
AACATAAAGGAGCATATTAGAAAGGGTTCAATTGTAGTAGTCGATCACTTGAGTTACAATACTC
TTACAGCCATATTCCGTGAAGTTAAGGGGATTATCGAAAGAATGTAAAGTGACCCAGAAATTAA
AGAGAACACTGAACAGTGTCCAAAATTTGATTGGCTGTACATGCCCAAAGAGTTTTGCATAATA
TTTTGGTAATTACTGCTCACACATTTTTGTCTTAACATCTTTTACATATTATTACCTGTGGCAG
GTTCTAGCTCAAAGCTAGACCATTTTTGATGTATCAAATAAATATTAACATCTTGAGATAAAAA
AGTTTATTGATTTCTATCTTATCTAGATTAGCAAATTTGTAACATTTTACTTAAGGAAACTGTG
ATCCAACTCTCAGAAGTACTGTGTCTTGAGGGTTAGTATCTGCTTAGATCTGTTGGTGGCTCCA
GAGAGCAAAAGAGAAACTACTGCTCTTGTAATCTAGTTACAGAAATAAGGCATACGCAAATAAA
GATATCTGATGGTACTTA

hide sequence

RefSeq Acc Id:

XM_011247760 ⟹ XP_011246062

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	X	134,742,388 - 134,791,828 (+)	NCBI
GRCm38	X	135,841,639 - 135,891,079 (+)	NCBI

Sequence:

show sequence

CTGCACTCACCCAGGACCTGTCCATCGTCCTCCAGCTTGATTTCAGCTCTTCTGCAGTGTATCT
GTGTTATTGACTGAGACTGCTTGGGTGGCAACAAAGTTCTGCAGCTAGACAGTGGTGATGGTTG
CAACAACCTTGAGAATTTACTTATGTCACTGAATTGTACAGTTTAAATTGATTACAATGGAACT
CCATGAAGCATTGAGAGAAAAACATGAAGAATCAAGAGTCCTCTCTGCAGACTGTTGCTAGGCT
ACCTGTTCCCTCTCTAGCTGCAGTACTAAAAGCCCTCCTCCCTTTCTACTGGCGTCAGAAGCTA
CGAGAGAACTGAAGGGTAGCAAGAGATGGAGTGCAGGGAGGGGCTGGGGGCCAGCAAAGCCCAG
CTTCCTACTGAAGTACAGGAGCACTCAGTATCCCTCCGCTGCTCCCTCCTGTTCCACATCTCCA
GACCACCTTCTCTCCATAGTCCCCCTCTCCAAAGCCCTCATAGACTCTAGATTTCAGCCATCTC
ACACACTGTTGTGGCACCCCCCCCCCAAAAAAAAGTGGTGGTGGTCTCTGGTTAGGGTGAACAG
GGGTCTGCAGACGCCTACGGGTGCAACCCACCTCTCCAAGAGGAGTGGGGCTGTCTGGCCCCGC
CCACTCCGAGTCGGAACTACAGTGGGTCCAGGAGGGGGCGTAGAGCCCCGTGCGCAGTATCCCT
CCGCCCCCTTCCCGACACCCTCGAGGTGAGCTGTGCTTGCCGCATCCTGCGCAGCCCCTGCCTG
TTTGGTGCAGAGACGTAGGGGCGGGACACGTCTCTGCCATTCCACTCGCGCGCAAAGCGGTGGG
GGTTCTGTGAGAGGATCCGCCGAGGACAGAGACCAGCCGGGAGCAGGAGGGGGACGCGGGGGAG
CCCGGACACCTGGGCCGTGCGCCTGGCCAGGATCCATTTTCTCAACATTTCACCTTGAACATTT
GTTTTAATGTTCGAATGGACTTAAAGTAAAGAAGAACTTTTTGTGCAGGTCGACTCTTCTCCAG
CCAGAGGGAAGAATAGCATCTCCCGAGCATCCTGCTTTGTGTTCTGCTGCCTTTGAAGTCAGTT
GGGTGGCTTTTCATCAGTGGAAGTGAGGAAGGAGGAATTCATCCCATCACATCAGCACACTTTA
GTGAAGCCTTTCTGAAAACCTGTCTTTCTCCACTGGTAGACTTGGATTGGGAGAAGATTGCTTT
CAACGGGTCTGCCTTTGGAAATCATCGTCTTCTCCCTAACCTGAGTGTGTCTTTAATTTGTCCC
TATCGTTGATAAGAGACTGTATGTCAAAAAAGGGGAATTTCTTAACGACTGAAGTGACAGTTGT
CTTGGACTCTTTCTGCCAAGTTTATCTCTGACTAAGTTAACAAGTATAAAGTTTCCAGCCCGGA
ACAAACAGAGAACTAAGGATAAGACTCGACAGGTGTATATAACTGTGCTTCAACCATGACTGGT
TCAAAGAATAAGGCTAGGGCACAGGCTAAACTAGAAAAAAGGGCAAGTGCACAAGCCAGAGCTG
TGGCAGAGAGGGAGGCTGCTAATGCCAACCGAGGTGCAGGCAAAAGCCGGGACAAAGGGAAAGG
TAAGGCAGGCTCTAAATCAGATGCAGTGGCAGAGGTGAAGGCAGGGTCTAAGGGAAAGGTAGTT
GCTGAGACAAAAGAAGGAGCGAGACCAGAATCTAAGGCTCTAGTAAAAGGCACCTCAGATTTCA
ACCATAGGACTGAGAACAAGTTTGCTAGATCCACACGTAAAGATAAGCCCAGTAGTGATAACTG
GTTCTGGGCTGGAGAAGATTCTGGTATTAATTCCTGGTTCTGGAAGGGAGAAGAGCTTAGTAAT
AATTCTGTTGCTAAGTGTGAAAATAAACCTAGTACTAGTATCCAGGCTCGTGCTGAGGAGCCCG
CACCTAGGACCAGCCACAAGTCTAGGTCAGGTGCTGAGGAGGAGGAGGAAGAGAACGTTATTGG
GAACTGGTTTTGGGAAGGCGATGACACTGGTTTTGATACTGATCCTAAACCTGTGTTCAAAATA
GTTAAACCTCAGCCAGTGGATGAAATTAATGAAAAAGATAGGCCAAAGGACTGGTCCGAGGTAA
CTATATGGCCCAAAGCTCCTGCTGTAACTCCAGCAGTGTTAGGTTATAGATCCCAGGATTCATC
TGAGGCAAGGTCCTCTTCATACATTGTTCTGGCCTCAAATGAAGAGGAAACTTCAACAGCCTGT
ACTAAGAATACTCGTTCAAGCCTACAGTCTATACCTGAGTATCCATTTGGTTCTGATCCTTGCA
TCCAGACCTTAGATGAAATTAGACAGCAAATCAAGATCAGAGAAGAGAATGGCATCAAGCCCTT
CGCTTGCCCTTGCAAACTGGAGTGCTATTTGGATTCTCCAGAATTTGAAAAGCTTGTTAACATA
CTTAAGTCAACTACTGATCCTCTTATTCATAAAATAGCACAGATTGCAATGGGTATACATAAGG
TTCATCCATTTGCCCAGGAATTCATTAATGAAGTGGGCGTGGTGACACTTATTGAAAGCTTGCT
CAGTTTTTCTTCCCCTGAGGTTAGTATTAAAAAGGCTGTGATTACTCTGAACTCTTCCGGGGAT
GACAGATACAACAAGGTAGAGTTTCATGTTAAGCATATGTGTAAAGAAACTGTGTCCTTCCCCT
TGAACTCACCTGGCCAGCAATCTGGATTAAAGATAATAGGGCAGCTGACTACCGAGTCTGTCCA
TCACTACATTGTAGTCAGCTACTTTTCAGAGCTTTTCCATTTGCTGTCTCAGGGAAATCGTAAG
ACTAGGAATCTTGTTTTGAAAGTATTTTTGAATATGTCTGAAAATCCCAAGGCAGCCAGAGATA
TGATAAATATGAAGGCGTTAGCAGCATTAAAACTCATCTTTAACCAAAAAGAGGCAAAAGCCAA
TCTTGTTAGTGCTGTGGCCATCTTTATTAACATAAAGGAGCATATTAGAAAGGGTTCAATTGTA
GTAGTCGATCACTTGAGTTACAATACTCTTACAGCCATATTCCGTGAAGTTAAGGGGATTATCG
AAAGAATGTAAAGTGACCCAGAAATTAAAGAGAACACTGAACAGTGTCCAAAATTTGATTGGCT
GTACATGCCCAAAGAGTTTTGCATAATATTTTGGTAATTACTGCTCACACATTTTTGTCTTAAC
ATCTTTTACATATTATTACCTGTGGCAGGTTCTAGCTCAAAGCTAGACCATTTTTGATGTATCA
AATAAATATTAACATCTTGAGATAAAAAAGTTTATTGATTTCTATCTTATCTAGATTAGCAAAT
TTGTAACATTTTACTTAAGGAAACTGTGATCCAACTCTCAGAAGTACTGTGTCTTGAGGGTTAG
TATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAAGAGAAACTACTGCTCTTGTAATCTAG
TTACAGAAATAAGGCATACGCAAATAAAGATATCTGATGGTACTTA

hide sequence

RefSeq Acc Id:

XM_036162091 ⟹ XP_036017984

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	X	134,746,680 - 134,791,828 (+)	NCBI

Sequence:

show sequence

TACAGTTTAAATTGATTACAATGATAGCAGCCATTGGTACATTCTTGTCTTTTCTGAGTAGTCC
CACATATCCTCTGAGTACCAGGAACTCCATGAAGCATTGAGAGAAAAACATGAAGAATCAAGAG
TCCTCTCTGCAGACTGTTGCTAGGCTACCTGTTCCCTCTCTAGCTGCAGTACTAAAAGCCCTCC
TCCCTTTCTACTGGCGTCAGAAGCTACGAGAGAACTGAAGGGTAGCAAGAGATGGAGTGCAGGG
AGGGGCTGGGGGCCAGCAAAGCCCAGCTTCCTACTGAAGTACAGGAGCACTCAGTATCCCTCCG
CTGCTCCCTCCTGTTCCACATCTCCAGACCACCTTCTCTCCATAGTCCCCCTCTCCAAAGCCCT
CATAGACTCTAGATTTCAGCCATCTCACACACTGTTGTGGCACCCCCCCCCCAAAAAAAAGTGG
TGGTGGTCTCTGGTTAGGGTGAACAGGGGTCTGCAGACGCCTACGGGTGCAACCCACCTCTCCA
AGAGGAGTGGGGCTGTCTGGCCCCGCCCACTCCGAGTCGGAACTACAGTGGGTCCAGGAGGGGG
CGTAGAGCCCCGTGCGCAGTATCCCTCCGCCCCCTTCCCGACACCCTCGAGGTGAGCTGTGCTT
GCCGCATCCTGCGCAGCCCCTGCCTGTTTGGTGCAGAGACGTAGGGGCGGGACACGTCTCTGCC
ATTCCACTCGCGCGCAAAGCGGTGGGGGTTCTGTGAGAGGATCCGCCGAGGACAGAGACCAGCC
GGGAGCAGGAGGGGGACGCGGGGGAGCCCGGACACCTGGGCCGTGCGCCTGGCCAGGATCCATT
TTCTCAACATTTCACCTTGAACATTTGTTTTAATGTTCGAATGGACTTAAAGTAAAGAAGAACT
TTTTGTGCAGGTCGACTCTTCTCCAGCCAGAGGGAAGAATAGCATCTCCCGAGCATCCTGCTTT
GTGTTCTGCTGCCTTTGAAGTCAGTTGGGTGGCTTTTCATCAGTGGAAGTGAGGAAGGAGGAAT
TCATCCCATCACATCAGCACACTTTAGTGAAGCCTTTCTGAAAACCTGTCTTTCTCCACTGGTA
GACTTGGATTGGGAGAAGATTGCTTTCAACGGGTCTGCCTTTGGAAATCATCGTCTTCTCCCTA
ACCTGAGTGTGTCTTTAATTTGTCCCTATCGTTGATAAGAGACTGTATGTCAAAAAAGGGGAAT
TTCTTAACGACTGAAGTGACAGTTGTCTTGGACTCTTTCTGCCAAGTTTATCTCTGACTAAGTT
AACAAGTATAAAGTTTCCAGCCCGGAACAAACAGAGAACTAAGGATAAGACTCGACAGGTGTAT
ATAACTGTGCTTCAACCATGACTGGTTCAAAGAATAAGGCTAGGGCACAGGCTAAACTAGAAAA
AAGGGCAAGTGCACAAGCCAGAGCTGTGGCAGAGAGGGAGGCTGCTAATGCCAACCGAGGTGCA
GGCAAAAGCCGGGACAAAGGGAAAGGTAAGGCAGGCTCTAAATCAGATGCAGTGGCAGAGGTGA
AGGCAGGGTCTAAGGGAAAGGTAGTTGCTGAGACAAAAGAAGGAGCGAGACCAGAATCTAAGGC
TCTAGTAAAAGGCACCTCAGATTTCAACCATAGGACTGAGAACAAGTTTGCTAGATCCACACGT
AAAGATAAGCCCAGTAGTGATAACTGGTTCTGGGCTGGAGAAGATTCTGGTATTAATTCCTGGT
TCTGGAAGGGAGAAGAGCTTAGTAATAATTCTGTTGCTAAGTGTGAAAATAAACCTAGTACTAG
TATCCAGGCTCGTGCTGAGGAGCCCGCACCTAGGACCAGCCACAAGTCTAGGTCAGGTGCTGAG
GAGGAGGAGGAAGAGAACGTTATTGGGAACTGGTTTTGGGAAGGCGATGACACTGGTTTTGATA
CTGATCCTAAACCTGTGTTCAAAATAGTTAAACCTCAGCCAGTGGATGAAATTAATGAAAAAGA
TAGGCCAAAGGACTGGTCCGAGGTAACTATATGGCCCAAAGCTCCTGCTGTAACTCCAGCAGTG
TTAGGTTATAGATCCCAGGATTCATCTGAGGCAAGGTCCTCTTCATACATTGTTCTGGCCTCAA
ATGAAGAGGAAACTTCAACAGCCTGTACTAAGAATACTCGTTCAAGCCTACAGTCTATACCTGA
GTATCCATTTGGTTCTGATCCTTGCATCCAGACCTTAGATGAAATTAGACAGCAAATCAAGATC
AGAGAAGAGAATGGCATCAAGCCCTTCGCTTGCCCTTGCAAACTGGAGTGCTATTTGGATTCTC
CAGAATTTGAAAAGCTTGTTAACATACTTAAGTCAACTACTGATCCTCTTATTCATAAAATAGC
ACAGATTGCAATGGGTATACATAAGGTTCATCCATTTGCCCAGGAATTCATTAATGAAGTGGGC
GTGGTGACACTTATTGAAAGCTTGCTCAGTTTTTCTTCCCCTGAGGTTAGTATTAAAAAGGCTG
TGATTACTCTGAACTCTTCCGGGGATGACAGATACAACAAGGTAGAGTTTCATGTTAAGCATAT
GTGTAAAGAAACTGTGTCCTTCCCCTTGAACTCACCTGGCCAGCAATCTGGATTAAAGATAATA
GGGCAGCTGACTACCGAGTCTGTCCATCACTACATTGTAGTCAGCTACTTTTCAGAGCTTTTCC
ATTTGCTGTCTCAGGGAAATCGTAAGACTAGGAATCTTGTTTTGAAAGTATTTTTGAATATGTC
TGAAAATCCCAAGGCAGCCAGAGATATGATAAATATGAAGGCGTTAGCAGCATTAAAACTCATC
TTTAACCAAAAAGAGGCAAAAGCCAATCTTGTTAGTGCTGTGGCCATCTTTATTAACATAAAGG
AGCATATTAGAAAGGGTTCAATTGTAGTAGTCGATCACTTGAGTTACAATACTCTTACAGCCAT
ATTCCGTGAAGTTAAGGGGATTATCGAAAGAATGTAAAGTGACCCAGAAATTAAAGAGAACACT
GAACAGTGTCCAAAATTTGATTGGCTGTACATGCCCAAAGAGTTTTGCATAATATTTTGGTAAT
TACTGCTCACACATTTTTGTCTTAACATCTTTTACATATTATTACCTGTGGCAGGTTCTAGCTC
AAAGCTAGACCATTTTTGATGTATCAAATAAATATTAACATCTTGAGATAAAAAAGTTTATTGA
TTTCTATCTTATCTAGATTAGCAAATTTGTAACATTTTACTTAAGGAAACTGTGATCCAACTCT
CAGAAGTACTGTGTCTTGAGGGTTAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGCAAAA
GAGAAACTACTGCTCTTGTAATCTAGTTACAGAAATAAGGCATACGCAAATAAAGATATCTGAT
GGTACTTA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001091692	(Get FASTA)	NCBI Sequence Viewer
	NP_937804	(Get FASTA)	NCBI Sequence Viewer
	XP_006528671	(Get FASTA)	NCBI Sequence Viewer
	XP_011246062	(Get FASTA)	NCBI Sequence Viewer
	XP_036017984	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH59871	(Get FASTA)	NCBI Sequence Viewer
	BAE25572	(Get FASTA)	NCBI Sequence Viewer
	BAE33934	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000068067
	ENSMUSP00000068067.8
	ENSMUSP00000121154.2
	ENSMUSP00000137213
	ENSMUSP00000137213.2
GenBank Protein	Q6PB60	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_937804 ⟸ NM_198161

- UniProtKB:

Q3U0C1 (UniProtKB/Swiss-Prot), Q69ZD0 (UniProtKB/Swiss-Prot), Q6PB60 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MTGSKNKARAQAKLEKRASAQARAVAEREAANANRGAGKSRDKGKGKAGSKSDAVAEVKAGSKG
KVVAETKEGARPESKALVKGTSDFNHRTENKFARSTRKDKPSSDNWFWAGEDSGINSWFWKGEE
LSNNSVAKCENKPSTSIQARAEEPAPRTSHKSRSGAEEEEEENVIGNWFWEGDDTGFDTDPKPV
FKIVKPQPVDEINEKDRPKDWSEVTIWPKAPAVTPAVLGYRSQDSSEARSSSYIVLASNEEETS
TACTKNTRSSLQSIPEYPFGSDPCIQTLDEIRQQIKIREENGIKPFACPCKLECYLDSPEFEKL
VNILKSTTDPLIHKIAQIAMGIHKVHPFAQEFINEVGVVTLIESLLSFSSPEVSIKKAVITLNS
SGDDRYNKVEFHVKHMCKETVSFPLNSPGQQSGLKIIGQLTTESVHHYIVVSYFSELFHLLSQG
NRKTRNLVLKVFLNMSENPKAARDMINMKALAALKLIFNQKEAKANLVSAVAIFINIKEHIRKG
SIVVVDHLSYNTLTAIFREVKGIIERM

hide sequence

RefSeq Acc Id:

NP_001091692 ⟸ NM_001098222

- UniProtKB:

Q3U0C1 (UniProtKB/Swiss-Prot), Q69ZD0 (UniProtKB/Swiss-Prot), Q6PB60 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MTGSKNKARAQAKLEKRASAQARAVAEREAANANRGAGKSRDKGKGKAGSKSDAVAEVKAGSKG
KVVAETKEGARPESKALVKGTSDFNHRTENKFARSTRKDKPSSDNWFWAGEDSGINSWFWKGEE
LSNNSVAKCENKPSTSIQARAEEPAPRTSHKSRSGAEEEEEENVIGNWFWEGDDTGFDTDPKPV
FKIVKPQPVDEINEKDRPKDWSEVTIWPKAPAVTPAVLGYRSQDSSEARSSSYIVLASNEEETS
TACTKNTRSSLQSIPEYPFGSDPCIQTLDEIRQQIKIREENGIKPFACPCKLECYLDSPEFEKL
VNILKSTTDPLIHKIAQIAMGIHKVHPFAQEFINEVGVVTLIESLLSFSSPEVSIKKAVITLNS
SGDDRYNKVEFHVKHMCKETVSFPLNSPGQQSGLKIIGQLTTESVHHYIVVSYFSELFHLLSQG
NRKTRNLVLKVFLNMSENPKAARDMINMKALAALKLIFNQKEAKANLVSAVAIFINIKEHIRKG
SIVVVDHLSYNTLTAIFREVKGIIERM

hide sequence

RefSeq Acc Id:	XP_006528671 ⟸ XM_006528608
- Peptide Label:	isoform X1
- UniProtKB:	Q3U0C1 (UniProtKB/Swiss-Prot), Q69ZD0 (UniProtKB/Swiss-Prot), Q6PB60 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MTGSKNKARAQAKLEKRASAQARAVAEREAANANRGAGKSRDKGKGKAGSKSDAVAEVKAGSKG KVVAETKEGARPESKALVKGTSDFNHRTENKFARSTRKDKPSSDNWFWAGEDSGINSWFWKGEE LSNNSVAKCENKPSTSIQARAEEPAPRTSHKSRSGAEEEEEENVIGNWFWEGDDTGFDTDPKPV FKIVKPQPVDEINEKDRPKDWSEVTIWPKAPAVTPAVLGYRSQDSSEARSSSYIVLASNEEETS TACTKNTRSSLQSIPEYPFGSDPCIQTLDEIRQQIKIREENGIKPFACPCKLECYLDSPEFEKL VNILKSTTDPLIHKIAQIAMGIHKVHPFAQEFINEVGVVTLIESLLSFSSPEVSIKKAVITLNS SGDDRYNKVEFHVKHMCKETVSFPLNSPGQQSGLKIIGQLTTESVHHYIVVSYFSELFHLLSQG NRKTRNLVLKVFLNMSENPKAARDMINMKALAALKLIFNQKEAKANLVSAVAIFINIKEHIRKG SIVVVDHLSYNTLTAIFREVKGIIERM hide sequence

RefSeq Acc Id:	XP_011246062 ⟸ XM_011247760
- Peptide Label:	isoform X1
- UniProtKB:	Q3U0C1 (UniProtKB/Swiss-Prot), Q69ZD0 (UniProtKB/Swiss-Prot), Q6PB60 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MTGSKNKARAQAKLEKRASAQARAVAEREAANANRGAGKSRDKGKGKAGSKSDAVAEVKAGSKG KVVAETKEGARPESKALVKGTSDFNHRTENKFARSTRKDKPSSDNWFWAGEDSGINSWFWKGEE LSNNSVAKCENKPSTSIQARAEEPAPRTSHKSRSGAEEEEEENVIGNWFWEGDDTGFDTDPKPV FKIVKPQPVDEINEKDRPKDWSEVTIWPKAPAVTPAVLGYRSQDSSEARSSSYIVLASNEEETS TACTKNTRSSLQSIPEYPFGSDPCIQTLDEIRQQIKIREENGIKPFACPCKLECYLDSPEFEKL VNILKSTTDPLIHKIAQIAMGIHKVHPFAQEFINEVGVVTLIESLLSFSSPEVSIKKAVITLNS SGDDRYNKVEFHVKHMCKETVSFPLNSPGQQSGLKIIGQLTTESVHHYIVVSYFSELFHLLSQG NRKTRNLVLKVFLNMSENPKAARDMINMKALAALKLIFNQKEAKANLVSAVAIFINIKEHIRKG SIVVVDHLSYNTLTAIFREVKGIIERM hide sequence

RefSeq Acc Id:

ENSMUSP00000068067 ⟸ ENSMUST00000068755

RefSeq Acc Id:

ENSMUSP00000121154 ⟸ ENSMUST00000148374

RefSeq Acc Id:

ENSMUSP00000137213 ⟸ ENSMUST00000180025

RefSeq Acc Id:	XP_036017984 ⟸ XM_036162091
- Peptide Label:	isoform X1
- UniProtKB:	Q6PB60 (UniProtKB/Swiss-Prot), Q3U0C1 (UniProtKB/Swiss-Prot), Q69ZD0 (UniProtKB/Swiss-Prot)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6PB60-F1-model_v2	AlphaFold	Q6PB60	1-539	view protein structure

Promoters

RGD ID:

6845532

Promoter ID:

MM_KWN:61932

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, Brain, ES_Cell, Kidney, MEF_B4, Spleen

Transcripts:

NM_001098222, NM_198161, OTTMUST00000045135

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	X	132,419,966 - 132,420,597 (+)	MPROMDB

RGD ID:

6845529

Promoter ID:

MM_KWN:61933

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Brain

Transcripts:

ENSMUST00000113141

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	X	132,423,896 - 132,424,447 (+)	MPROMDB

RGD ID:

13681400

Promoter ID:

EPDNEW_M24849

Type:

single initiation site

Name:

Bhlhb9_2

Description:

Mus musculus basic helix-loop-helix domain containing, classB9 , transcript variant 2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M24850

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	X	135,866,685 - 135,866,745	EPDNEW

RGD ID:

13681402

Promoter ID:

EPDNEW_M24850

Type:

initiation region

Name:

Bhlhb9_1

Description:

Mus musculus basic helix-loop-helix domain containing, classB9 , transcript variant 2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M24849

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	X	135,885,927 - 135,885,987	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1917487	AgrOrtholog
Ensembl Genes	ENSMUSG00000055275
	ENSMUSG00000072964	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000068755	ENTREZGENE
	ENSMUST00000068755.14	UniProtKB/Swiss-Prot
	ENSMUST00000148374.8	UniProtKB/TrEMBL
	ENSMUST00000180025	ENTREZGENE
	ENSMUST00000180025.8	UniProtKB/Swiss-Prot
Gene3D-CATH	1.25.10.10	UniProtKB/Swiss-Prot
InterPro	ARM-like	UniProtKB/Swiss-Prot
	ARM-rpt_dom	UniProtKB/Swiss-Prot
	ARM-type_fold	UniProtKB/Swiss-Prot
	BHLHb9/GASP-1/GASP-2	UniProtKB/Swiss-Prot
KEGG Report	mmu:70237	UniProtKB/Swiss-Prot
MGD	MGI:1917487	ENTREZGENE
NCBI Gene	70237	ENTREZGENE
PANTHER	PROTEIN BHLHB9	UniProtKB/Swiss-Prot
	PTHR46414	UniProtKB/Swiss-Prot
Pfam	Arm_2	UniProtKB/Swiss-Prot
PhenoGen	Bhlhb9	PhenoGen
Superfamily-SCOP	SSF48371	UniProtKB/Swiss-Prot
UniProt	A2AGB8_MOUSE	UniProtKB/TrEMBL
	BHLH9_MOUSE	UniProtKB/Swiss-Prot
	Q3U0C1	ENTREZGENE
	Q69ZD0	ENTREZGENE
	Q6PB60	ENTREZGENE
UniProt Secondary	Q3U0C1	UniProtKB/Swiss-Prot
	Q69ZD0	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar