Vmn1r81 (vomeronasal 1 receptor 81) - Rat Genome Database

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Gene: Vmn1r81 (vomeronasal 1 receptor 81) Mus musculus
Analyze
No known orthologs.
Symbol: Vmn1r81
Name: vomeronasal 1 receptor 81
RGD ID: 1551925
MGI Page MGI
Description: Predicted to enable pheromone binding activity and pheromone receptor activity. Predicted to act upstream of or within response to pheromone. Predicted to be located in plasma membrane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: V1r; V1rg9; vomernasal 1 receptor Vmn1r81; vomeronasal 1 receptor, G9; vomeronasal type 1 receptor G9
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39711,993,686 - 11,994,606 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl711,981,168 - 12,002,196 (-)EnsemblGRCm39 Ensembl
GRCm38712,259,759 - 12,260,679 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl712,247,241 - 12,268,269 (-)EnsemblGRCm38mm10GRCm38
MGSCv37712,845,108 - 12,846,028 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36711,165,623 - 11,166,543 (-)NCBIMGSCv36mm8
Celera79,891,866 - 9,892,786 (-)NCBICelera
Cytogenetic Map7A1NCBI
cM Map77.46NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
3. Multiple new and isolated families within the mouse superfamily of V1r vomeronasal receptors. Rodriguez I, etal., Nat Neurosci 2002 Feb;5(2):134-40.
Additional References at PubMed
PMID:19952141   PMID:20003482   PMID:21267068   PMID:21873635  


Genomics

Variants

.
Variants in Vmn1r81
31 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:45
Count of miRNA genes:44
Interacting mature miRNAs:44
Transcripts:ENSMUST00000086232
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301177Vent3_mventricular size 3 (mouse)Not determined7120511925Mouse
10054067Sle20_msystematic lupus erythematosus susceptibility 20 (mouse)Not determined7120511925Mouse
1302188Lxw6_mlupus BXSB x NZW 6 (mouse)Not determined7121698146Mouse
12904941Edlmmq6_mextensor digitorum longus muscle mass QTL 6 (mouse)7121821047Mouse
12904948Tammq5_mtibialis anterior muscle mass QTL 5 (mouse)7121821047Mouse
12904953Gmmq5_mgastrocnemius muscle mass QTL 5 (mouse)7121821047Mouse
1301572Sluc30_msusceptibility to lung cancer 30 (mouse)Not determined7243169636431844Mouse
1302115Abhr3_mallergen-induced bronchial hyperresponsiveness 3 (mouse)Not determined7331599616637423Mouse
1301115Lrdm1_mlymphoproliferation (Fas) renal disease modifier 1 (mouse)Not determined7335204824879418Mouse
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
25394569Skmw57_mskeletal muscle weight 57, gastroc (mouse)7458046916687861Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
1357699Nhdlq6_mnon-HDL QTL 6 (mouse)Not determined7998886743988984Mouse
1558893Spir1_mStreptococcus pneumoniae infection resistance 1 (mouse)Not determined71030579844305936Mouse

Markers in Region
UniSTS:495335  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38712,259,724 - 12,260,735UniSTSGRCm38
MGSCv37712,845,073 - 12,846,084UniSTSGRCm37
Celera79,891,831 - 9,892,842UniSTS
Cytogenetic Map7A1UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_134210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC145345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY065524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF783455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000086232   ⟹   ENSMUSP00000083409
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl711,993,686 - 11,994,606 (-)Ensembl
GRCm38.p6 Ensembl712,259,759 - 12,260,679 (-)Ensembl
RefSeq Acc Id: ENSMUST00000227080   ⟹   ENSMUSP00000153719
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl711,981,168 - 12,002,196 (-)Ensembl
GRCm38.p6 Ensembl712,247,241 - 12,268,269 (-)Ensembl
RefSeq Acc Id: ENSMUST00000227973   ⟹   ENSMUSP00000154529
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl711,981,168 - 12,002,196 (-)Ensembl
GRCm38.p6 Ensembl712,247,241 - 12,268,269 (-)Ensembl
RefSeq Acc Id: ENSMUST00000228482   ⟹   ENSMUSP00000153780
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl711,981,168 - 12,002,196 (-)Ensembl
GRCm38.p6 Ensembl712,247,241 - 12,268,269 (-)Ensembl
RefSeq Acc Id: ENSMUST00000228764   ⟹   ENSMUSP00000153767
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl711,981,168 - 12,002,196 (-)Ensembl
GRCm38.p6 Ensembl712,247,241 - 12,268,269 (-)Ensembl
RefSeq Acc Id: NM_134210   ⟹   NP_598971
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39711,993,686 - 11,994,606 (-)NCBI
GRCm38712,259,759 - 12,260,679 (-)ENTREZGENE
MGSCv37712,845,108 - 12,846,028 (-)RGD
Celera79,891,866 - 9,892,786 (-)RGD
cM Map7 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_598971 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAL47929 (Get FASTA)   NCBI Sequence Viewer  
  AEF00556 (Get FASTA)   NCBI Sequence Viewer  
  AEF00557 (Get FASTA)   NCBI Sequence Viewer  
  AEF00558 (Get FASTA)   NCBI Sequence Viewer  
  AEF00559 (Get FASTA)   NCBI Sequence Viewer  
  AEF00560 (Get FASTA)   NCBI Sequence Viewer  
  AEF00561 (Get FASTA)   NCBI Sequence Viewer  
  AEF00562 (Get FASTA)   NCBI Sequence Viewer  
  AEF00563 (Get FASTA)   NCBI Sequence Viewer  
  AEF00564 (Get FASTA)   NCBI Sequence Viewer  
  AEF00565 (Get FASTA)   NCBI Sequence Viewer  
  AEF00566 (Get FASTA)   NCBI Sequence Viewer  
  AEF00567 (Get FASTA)   NCBI Sequence Viewer  
  AEF00568 (Get FASTA)   NCBI Sequence Viewer  
  AEF00569 (Get FASTA)   NCBI Sequence Viewer  
  AEF00570 (Get FASTA)   NCBI Sequence Viewer  
  AEF00571 (Get FASTA)   NCBI Sequence Viewer  
  AEF00572 (Get FASTA)   NCBI Sequence Viewer  
  AEF00573 (Get FASTA)   NCBI Sequence Viewer  
  AEF00574 (Get FASTA)   NCBI Sequence Viewer  
  AEF00575 (Get FASTA)   NCBI Sequence Viewer  
  AEF00576 (Get FASTA)   NCBI Sequence Viewer  
  AEF00577 (Get FASTA)   NCBI Sequence Viewer  
  AEF00578 (Get FASTA)   NCBI Sequence Viewer  
  AEF00579 (Get FASTA)   NCBI Sequence Viewer  
  AEF00580 (Get FASTA)   NCBI Sequence Viewer  
  AEF00581 (Get FASTA)   NCBI Sequence Viewer  
  AEF00582 (Get FASTA)   NCBI Sequence Viewer  
  AEF00583 (Get FASTA)   NCBI Sequence Viewer  
  EDL38115 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000083409
  ENSMUSP00000083409.2
  ENSMUSP00000153719.2
  ENSMUSP00000153767.2
  ENSMUSP00000153780.2
  ENSMUSP00000154529.2
Reference Protein Sequences
RefSeq Acc Id: NP_598971   ⟸   NM_134210
- UniProtKB: Q8R286 (UniProtKB/TrEMBL),   F6MCB7 (UniProtKB/TrEMBL),   F6MCC2 (UniProtKB/TrEMBL),   F6MCA6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000083409   ⟸   ENSMUST00000086232
RefSeq Acc Id: ENSMUSP00000154529   ⟸   ENSMUST00000227973
RefSeq Acc Id: ENSMUSP00000153719   ⟸   ENSMUST00000227080
RefSeq Acc Id: ENSMUSP00000153780   ⟸   ENSMUST00000228482
RefSeq Acc Id: ENSMUSP00000153767   ⟸   ENSMUST00000228764
Protein Domains
G-protein coupled receptors family 1 profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A2I3BPG7-F1-model_v2 AlphaFold A0A2I3BPG7 1-339 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2159648 AgrOrtholog
Ensembl Genes ENSMUSG00000066805
  ENSMUSG00000115027 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000086232 ENTREZGENE
  ENSMUST00000086232.2 UniProtKB/TrEMBL
  ENSMUST00000227080.2 UniProtKB/TrEMBL
  ENSMUST00000227973.2 UniProtKB/TrEMBL
  ENSMUST00000228482.2 UniProtKB/TrEMBL
  ENSMUST00000228764.2 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn_supfam UniProtKB/TrEMBL
  Vmron_rcpt_1 UniProtKB/TrEMBL
KEGG Report mmu:171244 UniProtKB/TrEMBL
MGD MGI:2159648 ENTREZGENE
NCBI Gene 171244 ENTREZGENE
PANTHER PTHR24062 UniProtKB/TrEMBL
  VOMERONASAL TYPE-1 RECEPTOR UniProtKB/TrEMBL
Pfam V1R UniProtKB/TrEMBL
PhenoGen Vmn1r81 PhenoGen
PRINTS VOMERONASL1R UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A2I3BPG7_MOUSE UniProtKB/TrEMBL
  F6MCA6 ENTREZGENE
  F6MCB7 ENTREZGENE
  F6MCC2 ENTREZGENE
  Q8R286 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 Vmn1r81  vomeronasal 1 receptor 81  V1rg9  vomeronasal 1 receptor, G9  Symbol and/or name change 5135510 APPROVED