Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | gray platelet syndrome | | ISO | NBEAL2 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:21765411 more ... | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | gray platelet syndrome | | ISO | NBEAL2 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:21765411 more ... | |
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# | Reference Title | Reference Citation |
1. | Functional annotation of a full-length mouse cDNA collection. | Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90. |
2. | Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. | Okazaki N, etal., DNA Res 2003 Aug 31;10(4):167-80. |
3. | OMIM Disease Annotation Pipeline | OMIM Disease Annotation Pipeline |
4. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
5. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:8889548 | PMID:10349636 | PMID:11042159 | PMID:11076861 | PMID:12466851 | PMID:12477932 | PMID:14610273 | PMID:16141072 | PMID:16141073 | PMID:20562862 | PMID:21677750 | PMID:21873635 |
PMID:23861251 | PMID:23863626 | PMID:25258341 | PMID:25908104 | PMID:26916731 | PMID:26950939 | PMID:27079884 | PMID:28077416 | PMID:28783043 | PMID:28887433 | PMID:29187380 | PMID:29930006 |
PMID:30354215 | PMID:30936549 | PMID:30973865 | PMID:31171812 | PMID:32245826 | PMID:32325033 | PMID:32929010 | PMID:38355793 |
Nbeal2 (Mus musculus - house mouse) |
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NBEAL2 (Homo sapiens - human) |
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Nbeal2 (Rattus norvegicus - Norway rat) |
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Nbeal2 (Chinchilla lanigera - long-tailed chinchilla) |
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NBEAL2 (Pan paniscus - bonobo/pygmy chimpanzee) |
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NBEAL2 (Canis lupus familiaris - dog) |
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Nbeal2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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NBEAL2 (Sus scrofa - pig) |
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NBEAL2 (Chlorocebus sabaeus - green monkey) |
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Nbeal2 (Heterocephalus glaber - naked mole-rat) |
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Variants in Nbeal2
963 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
RefSeq Transcripts | NM_183276 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
GenBank Nucleotide | AC123811 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AC132103 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK003694 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK129158 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC037746 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC042396 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC157956 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC172118 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSMUST00000123996 ⟹ ENSMUSP00000122014 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000126088 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000129095 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000130024 ⟹ ENSMUSP00000118061 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000131017 ⟹ ENSMUSP00000114660 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000133191 ⟹ ENSMUSP00000121373 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000138072 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000149089 ⟹ ENSMUSP00000119254 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000153960 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000167320 ⟹ ENSMUSP00000128586 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000196488 ⟹ ENSMUSP00000143265 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_183276 ⟹ NP_899099 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
Protein RefSeqs | NP_899099 | (Get FASTA) | NCBI Sequence Viewer |
GenBank Protein | AAI57957 | (Get FASTA) | NCBI Sequence Viewer |
AAI72118 | (Get FASTA) | NCBI Sequence Viewer | |
BAC25048 | (Get FASTA) | NCBI Sequence Viewer | |
BAC97968 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSMUSP00000114660.2 | ||
ENSMUSP00000118061.2 | |||
ENSMUSP00000119254.2 | |||
ENSMUSP00000121373.2 | |||
ENSMUSP00000122014.2 | |||
ENSMUSP00000128586 | |||
ENSMUSP00000128586.2 | |||
ENSMUSP00000143265.2 | |||
GenBank Protein | Q6ZQA0 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_899099 ⟸ NM_183276 |
- UniProtKB: | E9Q9L6 (UniProtKB/TrEMBL), B2RXS1 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSMUSP00000118061 ⟸ ENSMUST00000130024 |
RefSeq Acc Id: | ENSMUSP00000121373 ⟸ ENSMUST00000133191 |
RefSeq Acc Id: | ENSMUSP00000114660 ⟸ ENSMUST00000131017 |
RefSeq Acc Id: | ENSMUSP00000119254 ⟸ ENSMUST00000149089 |
RefSeq Acc Id: | ENSMUSP00000128586 ⟸ ENSMUST00000167320 |
RefSeq Acc Id: | ENSMUSP00000122014 ⟸ ENSMUST00000123996 |
RefSeq Acc Id: | ENSMUSP00000143265 ⟸ ENSMUST00000196488 |
RGD ID: | 6844239 | ||||||||
Promoter ID: | MM_KWN:58921 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | Kidney, Lung | ||||||||
Transcripts: | OTTMUST00000081556, OTTMUST00000081557, UC009RUL.1 | ||||||||
Position: |
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RGD ID: | 6844858 | ||||||||
Promoter ID: | MM_KWN:58922 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | Brain, Kidney, Lung | ||||||||
Transcripts: | OTTMUST00000081552, OTTMUST00000081555 | ||||||||
Position: |
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RGD ID: | 6844859 | ||||||||
Promoter ID: | MM_KWN:58923 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | Kidney, Lung | ||||||||
Transcripts: | OTTMUST00000081554 | ||||||||
Position: |
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RGD ID: | 6844860 | ||||||||
Promoter ID: | MM_KWN:58925 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | Kidney, Liver, Lung, Spleen | ||||||||
Transcripts: | OTTMUST00000081551 | ||||||||
Position: |
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RGD ID: | 6844862 | ||||||||
Promoter ID: | MM_KWN:58926 | ||||||||
Type: | Non-CpG | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | BoneMarrow_0Hour, BoneMarrow_4Hour, Spleen | ||||||||
Transcripts: | OTTMUST00000081550 | ||||||||
Position: |
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RGD ID: | 6844861 | ||||||||
Promoter ID: | MM_KWN:58927 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | 3T3L1_Day3, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen | ||||||||
Transcripts: | NM_183276, OTTMUST00000081549 | ||||||||
Position: |
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RGD ID: | 8671010 | ||||||||
Promoter ID: | EPDNEW_M13536 | ||||||||
Type: | initiation region | ||||||||
Name: | Nbeal2_2 | ||||||||
Description: | Mus musculus neurobeachin-like 2 , mRNA. | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_M13537 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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RGD ID: | 8671012 | ||||||||
Promoter ID: | EPDNEW_M13537 | ||||||||
Type: | initiation region | ||||||||
Name: | Nbeal2_1 | ||||||||
Description: | Mus musculus neurobeachin-like 2 , mRNA. | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_M13536 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | MGI:2448554 | AgrOrtholog |
Ensembl Genes | ENSMUSG00000056724 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Transcript | ENSMUST00000123996.2 | UniProtKB/TrEMBL |
ENSMUST00000130024.2 | UniProtKB/TrEMBL | |
ENSMUST00000131017.8 | UniProtKB/TrEMBL | |
ENSMUST00000133191.8 | UniProtKB/Swiss-Prot | |
ENSMUST00000149089.2 | UniProtKB/TrEMBL | |
ENSMUST00000167320 | ENTREZGENE | |
ENSMUST00000167320.8 | UniProtKB/TrEMBL | |
ENSMUST00000196488.5 | UniProtKB/TrEMBL | |
Gene3D-CATH | 1.10.1540.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
1.25.10.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
2.130.10.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
2.30.29.30 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
InterPro | ARM-like | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
ARM-type_fold | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
BEACH_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
BEACH_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
ConA-like_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
DUF4704 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
NBCH_WD40 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Neurobeachin_a-sol | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PH-BEACH_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PH-like_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
WD40/YVTN_repeat-like_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
WD40_repeat | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
WD40_repeat_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | mmu:235627 | UniProtKB/TrEMBL |
MGD | MGI:2448554 | ENTREZGENE |
NCBI Gene | 235627 | ENTREZGENE |
PANTHER | BEIGE/BEACH-RELATED | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PTHR13743:SF111 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | Beach | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
DUF4704 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
DUF4800 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
NBCH_WD40 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Neurobeachin | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PH_BEACH | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PhenoGen | Nbeal2 | PhenoGen |
PROSITE | BEACH | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PH_BEACH | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
WD_REPEATS_2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
WD_REPEATS_REGION | UniProtKB/Swiss-Prot | |
SMART | Beach | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
WD40 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Superfamily-SCOP | PH domain-like | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
SSF48371 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SSF49899 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SSF50978 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SSF81837 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
UniProt | A0A0G2JFQ4_MOUSE | UniProtKB/TrEMBL |
B2RXS1 | ENTREZGENE, UniProtKB/TrEMBL | |
B7ZWL5_MOUSE | UniProtKB/TrEMBL | |
D3Z2K6_MOUSE | UniProtKB/TrEMBL | |
E9Q9L6 | ENTREZGENE, UniProtKB/TrEMBL | |
F6VTL9_MOUSE | UniProtKB/TrEMBL | |
F6ZZB1_MOUSE | UniProtKB/TrEMBL | |
F7CGQ9_MOUSE | UniProtKB/TrEMBL | |
NBEL2_MOUSE | UniProtKB/Swiss-Prot, ENTREZGENE | |
Q8BTE2_MOUSE | UniProtKB/TrEMBL |