Lman2 (lectin, mannose-binding 2) - Rat Genome Database

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Gene: Lman2 (lectin, mannose-binding 2) Mus musculus
Analyze
Symbol: Lman2
Name: lectin, mannose-binding 2
RGD ID: 1551129
MGI Page MGI
Description: Predicted to enable heat shock protein binding activity and mannose binding activity. Involved in positive regulation of phagocytosis. Predicted to be located in several cellular components, including Golgi apparatus; cell surface; and extracellular space. Predicted to be active in several cellular components, including COPII-coated ER to Golgi transport vesicle; Golgi membrane; and endoplasmic reticulum-Golgi intermediate compartment. Orthologous to human LMAN2 (lectin, mannose binding 2).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 1110003H06Rik; 1300009F09Rik; AA408240; AL023023; AU040819; GP36; GP36B; lectin mannose-binding 2; vesicular integral-membrane protein 36; vesicular integral-membrane protein VIP36; VI; VIP36
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391355,491,646 - 55,510,596 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1355,491,646 - 55,510,596 (-)EnsemblGRCm39 Ensembl
GRCm381355,343,833 - 55,362,783 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1355,343,833 - 55,362,783 (-)EnsemblGRCm38mm10GRCm38
MGSCv371355,445,194 - 55,464,144 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361355,353,455 - 55,372,405 (-)NCBIMGSCv36mm8
Celera1356,399,474 - 56,418,646 (-)NCBICelera
Cytogenetic Map13B1NCBI
cM Map1329.8NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7671812   PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11544199   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:16778019   PMID:18799693   PMID:21873635   PMID:22016386   PMID:28378742   PMID:30550785   PMID:32325033  


Genomics

Comparative Map Data
Lman2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391355,491,646 - 55,510,596 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1355,491,646 - 55,510,596 (-)EnsemblGRCm39 Ensembl
GRCm381355,343,833 - 55,362,783 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1355,343,833 - 55,362,783 (-)EnsemblGRCm38mm10GRCm38
MGSCv371355,445,194 - 55,464,144 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361355,353,455 - 55,372,405 (-)NCBIMGSCv36mm8
Celera1356,399,474 - 56,418,646 (-)NCBICelera
Cytogenetic Map13B1NCBI
cM Map1329.8NCBI
LMAN2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385177,331,567 - 177,351,668 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5177,315,805 - 177,351,840 (-)EnsemblGRCh38hg38GRCh38
GRCh375176,758,568 - 176,778,669 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365176,691,357 - 176,711,254 (-)NCBINCBI36Build 36hg18NCBI36
Build 345176,691,356 - 176,711,254NCBI
Celera5171,722,374 - 171,742,745 (+)NCBICelera
Cytogenetic Map5q35.3NCBI
HuRef5171,679,241 - 171,699,552 (-)NCBIHuRef
CHM1_15176,191,595 - 176,211,934 (-)NCBICHM1_1
T2T-CHM13v2.05177,874,790 - 177,894,892 (-)NCBIT2T-CHM13v2.0
Lman2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8179,274,362 - 9,294,950 (+)NCBIGRCr8
mRatBN7.2179,269,236 - 9,286,923 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl179,269,022 - 9,287,265 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx179,285,747 - 9,303,376 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01710,815,450 - 10,833,082 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0179,282,139 - 9,299,768 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0179,798,136 - 9,815,820 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl179,797,907 - 9,816,139 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01711,907,481 - 11,925,373 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41715,313,291 - 15,331,470 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11715,313,257 - 15,331,470 (+)NCBI
Celera179,347,770 - 9,365,303 (+)NCBICelera
Cytogenetic Map17p14NCBI
Lman2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540829,581,737 - 29,597,240 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540829,581,737 - 29,597,240 (-)NCBIChiLan1.0ChiLan1.0
LMAN2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24172,400,702 - 172,451,594 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15170,541,726 - 170,576,980 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05172,619,011 - 172,653,303 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15179,696,018 - 179,716,076 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5179,696,018 - 179,716,076 (-)Ensemblpanpan1.1panPan2
LMAN2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1436,002,963 - 36,023,788 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl436,002,341 - 36,023,787 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha435,970,558 - 35,991,241 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0436,369,371 - 36,390,131 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl436,369,392 - 36,393,670 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1436,194,590 - 36,215,063 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0436,380,795 - 36,401,235 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0436,890,050 - 36,910,748 (+)NCBIUU_Cfam_GSD_1.0
Lman2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213122,594,473 - 122,613,534 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365971,616,297 - 1,638,569 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365971,619,380 - 1,638,469 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LMAN2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl280,595,334 - 80,609,594 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1280,595,064 - 80,636,168 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2282,232,345 - 82,273,555 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LMAN2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12379,337,076 - 79,358,653 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2379,336,997 - 79,358,421 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607510,525,633 - 10,547,226 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lman2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473312,727,838 - 12,747,441 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473312,728,061 - 12,747,093 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Lman2
535 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1129
Count of miRNA genes:621
Interacting mature miRNAs:738
Transcripts:ENSMUST00000021940
Prediction methods:Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884393Humsd7_mhumerus midshaft diameter 7, 16 week (mouse)13395000076048119Mouse
1301015Sysbp2_msystolic blood pressure 2 (mouse)Not determined132047761259821605Mouse
4142147Mvwf4_mmodifier of von Willebrand factor 4 (mouse)Not determined20477612112898424Mouse
1357591Tesq1_mtestis weight QTL 1 (mouse)Not determined132061551255720517Mouse
4142009Pregq3_mpregnancy QTL 3 (mouse)Not determined132061551272385189Mouse
4142489Ath25_matherosclerosis 25 (mouse)Not determined2583652959836529Mouse
10401111Pgia40_mproteoglycan induced arthritis 40 (mouse)Not determined132791846961918560Mouse
1300710Pcd4ts2_mp-glycoprotein positive CD4 T cell subset 2 (mouse)Not determined132821044262210544Mouse
1357802Vtbt15_mvertebral trabecular bone trait 15 (mouse)Not determined132821737962217515Mouse
10045621Heal21_mwound healing/regeneration 21 (mouse)Not determined132821737962217515Mouse
10755533Chol18_mcholesterol 18 (mouse)133096946764969467Mouse
10755517Chol15_mcholesterol 15 (mouse)133096946764969467Mouse
12738439Twq4_mtestis weight QTL 4 (mouse)133112911065129110Mouse
14696729Kidlq2_mkidney weight, left QTL 2 (mouse)133134473665344736Mouse
1301299Sluc23_msusceptibility to lung cancer 23 (mouse)Not determined133492194368922081Mouse
10412235Scgq5_mspontaneous crescentic glomerulonephritis QTL 5 (mouse)Not determined133606090896239162Mouse
1357587Pfat3_mpredicted fat percentage 3 (mouse)Not determined133610153070101640Mouse
1301734Acsns2_mAngiostrongylus costaricensis nematode susceptibility 2 (mouse)Not determined133610153070101640Mouse
1300561Heal7_mwound healing/regeneration 7 (mouse)Not determined133614482070144904Mouse
1300862Cfbw5_mcystic fibrosis body weight 5 (mouse)Not determined133872035872720517Mouse
1300985Bmd13_mbone mineral density 13 (mouse)Not determined133962924973629397Mouse
1302157Bwem2_mbody weight day 30 males 2 (mouse)Not determined133962924973629397Mouse
1301801Cpfd5_mcerebellum pattern fissures (mouse)Not determined133962924973629397Mouse
15039353Nmrs35_mNAFLD-associated magnetic resonance shift 35 (mouse)134058825374588253Mouse
1300668Pas10_mpulmonary adenoma susceptibility 10 (mouse)Not determined134148904275489158Mouse
4142331Bxs6_mBXSB/MpJ autoimmune nephritis 6 (mouse)Not determined4521044283744746Mouse
10412109Bxs7_mBXSB/MpJ autoimmune nephritis 7 (mouse)Not determined134521044283744746Mouse
26884396Humsd4_mhumerus midshaft diameter 4, 10 week (mouse)134785347673148119Mouse
4142372Moo2_mmodifier of Odc2 (mouse)Not determinedX5031841184318559Mouse
1301666Eae13_msusceptibility to experimental allergic encephalomyelitis 13 (mouse)Not determined135031841184318559Mouse
1300573Elsgp2_melevated serum gp70 2 (mouse)Not determined135061682884617027Mouse
14746975Manh74_mmandible shape 74 (mouse)135247726986477269Mouse
1302073Pgct1_mprimordial germ cell tumor locus 1 (mouse)Not determined135382078387820897Mouse
1357563Bmch6_mbone mechanical trait 6 (mouse)Not determined135538498089385140Mouse

Markers in Region
AU040819  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381355,346,883 - 55,347,043UniSTSGRCm38
MGSCv371355,448,244 - 55,448,404UniSTSGRCm37
Celera1356,402,524 - 56,402,684UniSTS
Cytogenetic Map13B1UniSTS
Whitehead/MRC_RH13580.86UniSTS
RH125401  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381355,344,712 - 55,344,910UniSTSGRCm38
MGSCv371355,446,073 - 55,446,271UniSTSGRCm37
Celera1356,400,353 - 56,400,551UniSTS
Cytogenetic Map13B1UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_025828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC160958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
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  AK206764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
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  DQ725626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000021940   ⟹   ENSMUSP00000021940
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1355,491,646 - 55,510,596 (-)Ensembl
GRCm38.p6 Ensembl1355,343,833 - 55,362,783 (-)Ensembl
RefSeq Acc Id: ENSMUST00000224517
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1355,494,406 - 55,496,469 (-)Ensembl
GRCm38.p6 Ensembl1355,346,593 - 55,348,656 (-)Ensembl
RefSeq Acc Id: ENSMUST00000225066
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1355,498,574 - 55,499,327 (-)Ensembl
GRCm38.p6 Ensembl1355,350,761 - 55,351,514 (-)Ensembl
RefSeq Acc Id: ENSMUST00000225366
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1355,506,946 - 55,510,424 (-)Ensembl
GRCm38.p6 Ensembl1355,359,133 - 55,362,611 (-)Ensembl
RefSeq Acc Id: NM_025828   ⟹   NP_080104
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391355,491,646 - 55,510,596 (-)NCBI
GRCm381355,343,833 - 55,362,783 (-)ENTREZGENE
MGSCv371355,445,194 - 55,464,144 (-)RGD
Celera1356,399,474 - 56,418,646 (-)RGD
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_080104   ⟸   NM_025828
- Peptide Label: precursor
- UniProtKB: Q8BJL4 (UniProtKB/Swiss-Prot),   Q9CXG7 (UniProtKB/Swiss-Prot),   Q9DBH5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000021940   ⟸   ENSMUST00000021940
Protein Domains
L-type lectin-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9DBH5-F1-model_v2 AlphaFold Q9DBH5 1-358 view protein structure

Promoters
RGD ID:8680434
Promoter ID:EPDNEW_M18247
Type:multiple initiation site
Name:Lman2_1
Description:Mus musculus lectin, mannose-binding 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M18248  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381355,362,611 - 55,362,671EPDNEW
RGD ID:8680436
Promoter ID:EPDNEW_M18248
Type:initiation region
Name:Lman2_2
Description:Mus musculus lectin, mannose-binding 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M18247  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381355,362,828 - 55,362,888EPDNEW
RGD ID:6848626
Promoter ID:MM_TRO:2534
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung,   Spleen
Transcripts:MTR004036.13.1065.5
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361355,447,326 - 55,448,357 (-)MPROMDB
RGD ID:6847040
Promoter ID:MM_ACW:13369
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:LMAN2.BSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361355,452,441 - 55,452,941 (-)MPROMDB
RGD ID:6824114
Promoter ID:MM_KWN:14233
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_025828,   UC007QQP.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361355,463,911 - 55,464,447 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914140 AgrOrtholog
Ensembl Genes ENSMUSG00000021484 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000021940 ENTREZGENE
  ENSMUST00000021940.8 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.120.200 UniProtKB/Swiss-Prot
InterPro ConA-like_dom_sf UniProtKB/Swiss-Prot
  Lectin_leg UniProtKB/Swiss-Prot
  VIP36_lectin UniProtKB/Swiss-Prot
KEGG Report mmu:66890 UniProtKB/Swiss-Prot
MGD MGI:1914140 ENTREZGENE
NCBI Gene 66890 ENTREZGENE
PANTHER VESICULAR INTEGRAL-MEMBRANE PROTEIN VIP36 UniProtKB/Swiss-Prot
  VESICULAR MANNOSE-BINDING LECTIN UniProtKB/Swiss-Prot
Pfam Lectin_leg-like UniProtKB/Swiss-Prot
PhenoGen Lman2 PhenoGen
PROSITE L_LECTIN_LIKE UniProtKB/Swiss-Prot
Superfamily-SCOP SSF49899 UniProtKB/Swiss-Prot
UniProt LMAN2_MOUSE UniProtKB/Swiss-Prot
  Q8BJL4 ENTREZGENE
  Q9CXG7 ENTREZGENE
  Q9DBH5 ENTREZGENE
UniProt Secondary Q8BJL4 UniProtKB/Swiss-Prot
  Q9CXG7 UniProtKB/Swiss-Prot