TRDC (T cell receptor delta constant) - Rat Genome Database

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Gene: TRDC (T cell receptor delta constant) Canis lupus familiaris
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Symbol: TRDC
Name: T cell receptor delta constant
RGD ID: 150657555
Description: INVOLVED IN positive regulation of phagocytosis (inferred); positive regulation of T cell activation (inferred); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN external side of plasma membrane (inferred); plasma membrane (inferred)
Type: gene (Ensembl: protein-coding)
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Pig
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 Ensembl - Dog CanFam3.1 Assembly Ensembl
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha82,809,458 - 2,816,883 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.082,966,832 - 2,974,256 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl82,858,350 - 2,975,161 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.182,659,610 - 2,667,033 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.082,721,157 - 2,728,566 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.082,983,049 - 2,990,471 (+)NCBIUU_Cfam_GSD_1.0


Disease Annotations     Click to see Annotation Detail View
COVID-19  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

Genomics

Comparative Map Data
TRDC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha82,809,458 - 2,816,883 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.082,966,832 - 2,974,256 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl82,858,350 - 2,975,161 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.182,659,610 - 2,667,033 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.082,721,157 - 2,728,566 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.082,983,049 - 2,990,471 (+)NCBIUU_Cfam_GSD_1.0
TRDC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381422,462,932 - 22,466,577 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1422,462,932 - 22,465,787 (+)EnsemblGRCh38hg38GRCh38
GRCh371422,931,924 - 22,935,569 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361422,001,746 - 22,005,409 (+)NCBINCBI36Build 36hg18NCBI36
Celera142,794,857 - 2,798,520 (+)NCBICelera
Cytogenetic Map14q11.2NCBI
HuRef143,050,215 - 3,053,860 (+)NCBIHuRef
CHM1_11422,930,834 - 22,934,479 (+)NCBICHM1_1
T2T-CHM13v2.01416,660,690 - 16,664,335 (+)NCBIT2T-CHM13v2.0
Trdc
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391454,380,308 - 54,383,565 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1454,380,308 - 54,386,325 (+)EnsemblGRCm39 Ensembl
GRCm381454,142,851 - 54,146,108 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1454,142,851 - 54,148,868 (+)EnsemblGRCm38mm10GRCm38
MGSCv371454,762,526 - 54,765,783 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera1451,873,047 - 51,940,029 (+)NCBICelera
Cytogenetic Map14C2NCBI
cM Map1427.66NCBI
LOC102160313
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl776,469,954 - 76,673,728 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1776,554,354 - 76,565,679 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2781,787,550 - 81,803,664 (-)NCBISscrofa10.2Sscrofa10.2susScr3


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00845002970   ⟹   ENSCAFP00845002366
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl82,858,350 - 2,975,161 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845002976   ⟹   ENSCAFP00845002372
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl82,967,040 - 2,975,161 (+)Ensembl
Protein Sequences
Ensembl Protein ENSCAFP00845002366.1
  ENSCAFP00845002372.1
Reference Protein Sequences
RefSeq Acc Id: ENSCAFP00845002366   ⟸   ENSCAFT00845002970
RefSeq Acc Id: ENSCAFP00845002372   ⟸   ENSCAFT00845002976
Protein Domains
Immunoglobulin C1-set


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00845001699 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00845002970.1 UniProtKB/TrEMBL
  ENSCAFT00845002976.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_C1-set UniProtKB/TrEMBL
NCBI Gene LOC102155496 ENTREZGENE
PANTHER IG-LIKE DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  SIGNAL-REGULATORY PROTEIN BETA UniProtKB/TrEMBL
Pfam C1-set UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
UniProt A0A8I3MEM7_CANLF UniProtKB/TrEMBL
  A0A8I3MQF5_CANLF UniProtKB/TrEMBL