PELI1 (pellino E3 ubiquitin protein ligase 1)

Gene: PELI1 (pellino E3 ubiquitin protein ligase 1) Sus scrofa

Analyze

Symbol:

PELI1

Name:

pellino E3 ubiquitin protein ligase 1

RGD ID:

14178857

Description:

ENCODES a protein that exhibits transferase activity (inferred); ubiquitin protein ligase activity (inferred); ubiquitin-protein transferase activity (inferred); INVOLVED IN negative regulation of T cell activation (ortholog); negative regulation of T cell proliferation (ortholog); negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); Bardet-Biedl syndrome (ortholog); colorectal cancer (ortholog); FOUND IN site of double-strand break (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

E3 ubiquitin-protein ligase pellino homolog 1; pellino homolog 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	77,713,489 - 77,796,914 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	77,740,460 - 77,796,911 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Arsenic Poisoning (ISO)

Bardet-Biedl syndrome (ISO)

colorectal cancer (ISO)

skin disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of necroptotic process (IEA)

negative regulation of T cell activation (IEA,ISO)

negative regulation of T cell proliferation (IEA,ISO)

negative regulation of TORC1 signaling (ISO)

positive regulation of B cell activation (IEA,ISO)

positive regulation of B cell proliferation (IEA,ISO)

positive regulation of canonical NF-kappaB signal transduction (IEA,ISO)

positive regulation of cytokine production (IEA,ISO)

positive regulation of double-strand break repair via homologous recombination (IEA)

positive regulation of protein ubiquitination (IEA,ISO)

positive regulation of toll-like receptor 3 signaling pathway (IEA,ISO)

positive regulation of toll-like receptor 4 signaling pathway (IEA,ISO)

proteasome-mediated ubiquitin-dependent protein catabolic process (IEA)

protein K48-linked ubiquitination (IEA,ISO)

protein K63-linked ubiquitination (IEA)

protein polyubiquitination (IEA,ISO)

protein ubiquitination (IEA)

regulation of Toll signaling pathway (IEA)

response to dsRNA (IEA,ISO)

response to lipopolysaccharide (IEA,ISO)

T cell activation (IEA,ISO)

T cell proliferation (IEA,ISO)

Cellular Component

nucleus (IEA)

site of double-strand break (IEA,ISO)

Molecular Function

protein binding (ISO)

transferase activity (IEA)

ubiquitin protein ligase activity (IEA)

ubiquitin-protein transferase activity (IEA)

ubiquitin-ubiquitin ligase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

interleukin-1 signaling pathway (ISO)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

PELI1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	77,713,489 - 77,796,914 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	77,740,460 - 77,796,911 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

PELI1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	64,092,652 - 64,144,420 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	64,092,652 - 64,144,420 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	64,319,786 - 64,371,554 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	64,173,499 - 64,192,987 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	64,231,645 - 64,251,134	NCBI
Celera	2	64,165,044 - 64,216,871 (-)	NCBI		Celera
Cytogenetic Map	2	p14	NCBI
HuRef	2	64,059,563 - 64,111,396 (-)	NCBI		HuRef
CHM1_1	2	64,250,026 - 64,301,844 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	64,100,282 - 64,152,062 (-)	NCBI		T2T-CHM13v2.0

Peli1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	21,041,283 - 21,100,327 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	21,041,291 - 21,100,323 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	21,091,283 - 21,150,327 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	21,091,291 - 21,150,323 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	20,991,327 - 21,050,330 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	21,035,472 - 21,050,326 (+)	NCBI		MGSCv36	mm8
Celera	11	23,239,549 - 23,298,574 (+)	NCBI		Celera
Cytogenetic Map	11	A3.1	NCBI
cM Map	11	13.81	NCBI

Peli1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	99,455,970 - 99,510,474 (+)	NCBI		GRCr8
mRatBN7.2	14	95,254,274 - 95,309,168 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	95,254,589 - 95,308,285 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	99,600,859 - 99,654,628 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	100,841,202 - 100,894,967 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	97,314,719 - 97,368,484 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	106,008,086 - 106,062,566 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	106,008,086 - 106,061,641 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	106,075,061 - 106,128,271 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	101,870,272 - 101,924,228 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	101,920,929 - 101,943,454 (+)	NCBI
Celera	14	94,267,696 - 94,321,536 (+)	NCBI		Celera
Cytogenetic Map	14	q22	NCBI

Peli1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955424	20,211,600 - 20,263,761 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955424	20,212,077 - 20,263,761 (+)	NCBI	ChiLan1.0	ChiLan1.0

PELI1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	62,250,630 - 62,306,758 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	62,257,658 - 62,310,709 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	64,160,362 - 64,213,200 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	65,284,472 - 65,336,335 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	65,284,480 - 65,336,339 (-)	Ensembl	panpan1.1		panPan2

PELI1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	63,727,905 - 63,863,599 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	63,729,604 - 63,743,303 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	63,616,694 - 63,752,371 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	64,736,541 - 64,872,342 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	64,736,553 - 64,795,619 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	64,418,361 - 64,554,038 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	64,727,691 - 64,863,369 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	65,019,832 - 65,155,570 (-)	NCBI		UU_Cfam_GSD_1.0

Peli1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	19,530,464 - 19,586,021 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936491	8,985,074 - 9,041,244 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936491	8,985,074 - 9,040,863 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PELI1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	42,864,857 - 42,930,315 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	42,864,897 - 42,930,394 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	68,937,787 - 69,003,497 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Peli1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624762	9,328,109 - 9,386,067 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624762	9,328,275 - 9,382,996 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in PELI1
985 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium	10	2	1	5		8		3	3
Low		2	2		2	15	2
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021087454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021087455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021087456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK389761	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU466372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU928831	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01070778	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000009160 ⟹ ENSSSCP00000008929

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	3	77,658,664 - 77,796,884 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000028590 ⟹ ENSSSCP00000026040

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	3	77,740,484 - 77,796,914 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000040046 ⟹ ENSSSCP00000050408

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	3	77,713,489 - 77,796,906 (+)	Ensembl

RefSeq Acc Id:

XM_021087454 ⟹ XP_020943113

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	77,740,460 - 77,796,911 (+)	NCBI

Sequence:

show sequence

CCTCCCTCTGAGTGTGTGTCAGTGACCCAGAGGCGGAGTGAGGCGGAGGGACCGTCGGGGGGCG
CCGCCGCTGCCGCCTCCAGCAGCAGCACTAGCCGAGCCGCGCGTTCGGGTTTGCCTCGAGCCCT
CCGGGAGCGCATCACAAAGCGGGCCCCGCGGCTCTCCCTCCGCCCGCGGCTCGTCAGCGCTCAG
CTCCGCGGCCAACTTCCCCTCGCCGGGCTCGGCCGGCTGGCGCGGAAGGCGGCGGCGGAACGCC
GGGCTGTCTGCTCGCGCTCCCCGCGCACGCACACTTCACCCCCTCGCCCCGGGTCTCGGGGCCG
TGCTGGGATTCCGGCCACCAGCAATTGTCCGGAAATAATGCAAAAGGTGTCCCAAGGCTCCTGA
CCAGTGAACAACGATTTGAGAAAGACAGCCAAGCTCATGTTTTCTCCTGATCAAGAAAATCATC
CATCCAAAGCACCAGTAAAATATGGTGAACTCATTGTCTTAGGGTATAATGGATCTCTCCCAAA
CGGCGATAGAGGAAGGAGGAAAAGTAGGTTTGCTTTGTTTAAAAGACCTAAGGCAAATGGGGTG
AAGCCCAGCACTGTGCATATCGCTTGTACTCCTCAGGCTGCAAAGGCAATAAGCAACAAGGACC
AGCATAGTATATCATATACCTTATCTCGGGCCCAGACAGTGGTGGTTGAATATACTCATGACAG
CAACACTGATATGTTTCAGATTGGGCGGTCGACTGAAAGTCCCATTGATTTTGTAGTAACCGAT
ACAGTTCCTGGAAGTCAGAGTAATTCTGATACACAGTCAGTGCAAAGCACCATATCAAGATTTG
CCTGTAGAATCATATGTGAACGGAATCCCCCCTTTACAGCACGGATTTATGCTGCAGGATTTGA
CTCATCAAAAAACATCTTTCTTGGGGAGAAGGCTGCCAAATGGAAGACATCAGATGGACAGATG
GATGGCTTGACCACTAATGGTGTTCTTGTTATGCATCCACGCAATGGGTTCACAGAAGACTCCA
AGCCTGGAATATGGAGAGAAATATCAGTGTGTGGAAATGTATTCAGCCTGCGTGAAACCAGGTC
AGCTCAGCAGAGAGGAAAAATGGTGGAAATTGAAACCAATCAACTTCAAGATGGCTCATTAATT
GACCTCTGTGGTGCAACATTGCTGTGGCGTACTGCAGAAGGCCTTTCCCACACTCCTACAGTGA
AGCATCTGGAAGCTTTAAGACAGGAAATCAATGCAGCACGACCTCAGTGCCCTGTAGGGTTCAA
CACACTAGCATTTCCTAGTATGAAGAGGAAAGATGTCGTTGATGAAAAACAACCATGGGTGTAT
CTAAACTGCGGCCATGTGCATGGCTATCATAACTGGGGAAACAAAGAAGAACGTGATGGAAAAG
ATCGTGAATGTCCTATGTGTAGGTCTGTTGGTCCCTATGTCCCTCTGTGGCTTGGATGTGAAGC
TGGATTTTATGTGGACGCCGGCCCTCCAACCCATGCGTTTAGCCCCTGTGGGCATGTGTGTTCA
GAGAAGACAACTGCCTATTGGTCCCAGATCCCGCTTCCTCATGGTACTCACACTTTCCATGCAG
CCTGTCCCTTTTGTGCACATCAGTTGGCTGGTGAACAAGGCTACATCAGACTCATTTTCCAAGG
ACCTCTGGACTAACAGACTCTTGTCCTCCAGGACTGCATTATAAATTTATAAGCTAAGTGATTT
GGGTTTTCCAACCTGTTGTCCACATCACAAGTTTTTCTGCTCTGGTCATTTGCATTAAGATGAA
GAATTTTTTTAAGCATTTGTAATAAACAGTAGCGATTTCTGAGCAAAAATCTGCGAAACTCAAG
CAAAGGGATTTCCGAAAAAGCAGACTTACGAATTCTGAGTTTTGAAAATATATTTTGAGGAGAA
AAAAACATAGTCTAATTTGATGCCTTCATTTTAGTGTTTTTGAATCACCCATCCTCAGTGTTGA
AAAATTGTTTTGTATAACTGAGGGTATTGTTGGTTCAAACTATGTTAGTTTACAGTTTGTTGCA
AACATTGTAAAATACAGCAACATGTATATTAACTTTTTTCTATTTATCTTTATTATAGAAACTA
TCTTAGAATGTTCTTTGTAGAGTAGCATGGTGACGATGGTCTCACACTCTTGGTGTGAATGGTA
GTTTAGCAAGCGTAGCTCAAGGATTTGCAAGGTTAGGAAGACGGACAAGAGAGCCTCTCTCCCC
ACCCCCACTTAAGTATGAAATTTGGTAAGTTAGAATACTTTGTAAAACCAAATTCATATTAATT
ACCATTGTGTAAGAAGTGTTTGTTTTTAACCGCATTGAAGATAATCGGGAAAGATTTTTTTCCT
TAATGTTTCTCCCGAGTGTAGTACTATAACAAAAATTTAATGCTAAGAAACATTTTATATGCTC
CTTTGAATATGCAATTTAATCTAGATTATCTATTTTTCTCCCACAATAACTAATCTGTTTTTAG
TATTGGCAACATTTGGCAAGTTTGTTTTTTAGATATAAACTGTGGTTCATCTGTTCACTGTTTC
TAGGGAAAAAAAATCATTCCCACGAGAAAAAGCATAAATTAACAAGGAGAGTGACTTGATTTGC
TTTAAAAAAAAAAAATGCTTAATTAATTTACTGTCCTGTATTTGGCTTTATCCAGGTGTGAAGA
CATTTAGAGAGATATAAAGGGTCAAAAGACGACAATGCTCTTTTGTTTTTAATCTAACAGACCA
GCCTTAACTGTGGGCTTCAATCCTAATAGAGTTGCCACAGTGGGACTCAAGGAAATGTATGGTT
GGCAGATGAGCACCCGTGACAGCCAAGTGGAGGGACACACTTGCATGGTCAGTTTATTCTCTAA
TTCCAATAAGTTCTTTGCTTTCAGAAGCAAGAAAACATTTCTTCTTTCTCCCCTCCCCCCCTTT
TTTAAACACACCACCAGGAAAGTATAGACAGTTGCACTACATCAAACCCTTTGTGACACTTGTA
GAAATCAGTACCCTTTTAGATTACACAGAATCATATTTTTTAATCTTTTGATTTATTTTCCTTT
AGTTCAAAAAGTTGTATAGTACTTAATTGACTAGCAAATTTTTGTATATGGTAGCATAGCTTTA
ATTTATCCTATTACAATGCTGTTCTGAATTTTCTTTAGTTTTTAAAAAAATCAAAATCTGTTGC
TTAGAAGTCATGAACTATTTTATTTTACTTCAACTTGTCAGAATTTCCTTGTTTTTTCAAAAAA
AAAATGATCATTTGGGTTCACTCAGGAAATGCATGTCAGGAAACTTGTATTATAAGTTGACTAG
TTGTGATGTATCAGTAACTGCTGTTACCCCTTTTTCAAAGAAATATAATTGATTTTGAAGTTTT
CCAGATTGTCACATGCTTTGTGACTAATGCAAGGAAATCAAGTCCTGTGTTGTATTTGTTCTAG
TCATTTCTATTCTGGCTATATATTGTAGCTAATTTTTATTTGCAATTAATTTATTCAAACTAAG
TAAATACTTTTCAAAATAGA

hide sequence

RefSeq Acc Id:

XM_021087455 ⟹ XP_020943114

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	77,764,768 - 77,796,911 (+)	NCBI

Sequence:

show sequence

CCTTCACCCACTGAACAAGGCCAGAGATTGAACCTGCAACCCCATGGTTCTTAGTCCGATTTGT
TTCTGCTGCACCACAATGGGAATTCCTGTATGTCTTCTTTAGAGAAATGTTTAAATTCTTTTAC
CAAATTTTAGTTGGATTATCTATATTTTTCTTATTTAATTTCAAGAGTTCTTTATACATATGTA
CCTGGATATAGATATACACATTTCCATGGGTTATCTAAGACAGTGCTTTTGATACTTAGATTTG
TTTTGTTTAAGGATAGTCCAGGTTAGCAAAGCCCTCAAAGTGGGAATGTAAACCAATTCAAGGA
GGCATGGCTGGAGTTCCCATTGTGGCTCAGTGGTTAACTAATCTGACTAGCATCCATCAGGATG
CAGGTTCAGTCTCTGGCCTCGCTCAGTGGGTTAAGGATCCAGCATTGCCGTGAGCTGTGGTGTA
GATTGCAGATGCAGCTCAGATCCCAAGTTGCTGTGGCTGTGGTGTCGGCCCATAGCTGTAGCTT
CTGTTCTACCGCCTAACCTGTGAACCTCCATATGCGCGGGTGTGGCCCTAAAAAGCAAAAAGAA
AGAAAAAAAAAAAGAGGCTTGGCTCATCTGGCAAACAAAGAGAAGCAAATTTCTATGGTATGCA
TATCATCGAACTTTTGTCTCAATTTCAGCTTTGTCTTTATGGTGTAAAATAACACACAGCAAAG
CGTAGAGCTAAAGAGTAAACACTTGGCCATCTCGTGTGATAACACCATGGTACAGGTCTGAGTT
ACTTGTGATAATGCTGTGGTACAAGGTATGCTCTGTTCTTTAGTGTTTGTGATATTGCCTCTCG
AACTAATGAAACAACCCAACAGAAACCAAAAGATTTATTAGCTGGCTCCATTACTTAGCCCTAT
GACTTCATCAAATACCTTAGCCTCTCTGGATATAGATGTTTCTCATCTATAAAATGAGGGAATT
GAAAATGAAGTTGATAAGATAATCTTTAAGGTTCTTTCAAGCATTAATATGTGATTATATGACA
CAGTAATACCAGTGACTTTCTACTTCTTCTTCCTGCCTCTAACAGGGAAGAATTATGCCTTGTT
GAAAAATCTTGGGCCCAAACAACTTTTCCTCAAAAGGATTAGAGTTAGGTGCATTTAGCAAGTG
AAAATCTGGGCGCAGGTAAAAAACTTATTGTGGGATATAGCCAAGGCCTTCTATGTGAAATTGC
CTTATGGGTTAGGGGAGCGTGACATAAGTGTCACCAGTGAGGTGGAACTAAAGGATGAAATAAT
TTACATACCTGTTGTGGGTGTGGTTAGAGGTAAAGGGACTATAAGGAATGAGTCCTTGGTTGCC
TCCTTGGAAGTATTCAGAAATCATTAGAGAAGCAAGCTGTCAGAGATCAGTTGGGTCCAAAGGT
GAAATCAAAACCTAGACTACAATAGTTAAGAAGAAAATAGGACATAAGAAAAGAAACATCTGAA
AAGGCATAGCGCTTGTGAGGTAAGTACACTTTGTTTTATTAAGTTTTCTTCTGGAATTTTTTTT
AAGTTTTCAGAGTACTGGATGTTATCATTGGTTCCTGAGCCCAGCTGAGATAAGTGCCAGAAAA
TAATTTATTCTATGTGAAAACAAGGAAGTTTGACACCTGTAAGCCAAACCAGATATGGAAGAAA
AGTGGGGAACGGGTCTTTGAGATTAAGGTACATTTGCCAAAGTTTGGTAACTTTGATTCCTACC
AGACTGGAAAGCTACTTCAAGTTTTATTTTTATATTTGACTGGCCTTCATGATGTTATTTAATC
AGATATCATTGTAAATAAAGCACATGTGAAAAGGAAAAAAAAATTCTTTTAAAAAGAGTTACTA
AAAGAAAAGCTTTAAAATTTTAATTCTACCCCATCTTTCCCTTATGAGTATGGACCTTTGTCCC
ATTTTAAAATTACTCATCATACTCACTTAGAAAATAGGGAGGTTTTATCTTCAGTGTCTTCTTA
GAGGTCCTTAAGAAAAATATCTTCCTTCAGGAGATTATTTGGTATAAACATAGAGCTTAAACTA
TGTAAGGAATTTTTATATTCCAATGCTCTATTTTTAATCATTACGTTATATCTTGATAATGTAT
GAGCTATTGATATCTTGATTGCCTTGATAGTTGAGCAGGAAATACACCCCCAAAATTAAGAGAG
TCAATATATTGGTGTAAAGAATGTCAGGTCCTGAGGTTTTGTTGTGGAAGCAAGTTTAAGGCAT
AGAGAATCAATCGCACCTACATTCTGTTTAGTATGAGTATTGAACCTGTCATGTCCGGCTTCTT
GAGCAACTTCATCAGCTTAGAATCACATGACATGGAAAGATCACCAAATAGCATAATGTTAGAA
TATGCCCAGTTCATTTTTACAAATATGTTTCCTGGACTGGACATACATCTGTTGGACAAAAAAG
CAGCCTACCTGAGCAGATTTACTTCACAGTAACATAAGTGTGCCTGCTGCCAGCAGAACGAGCA
AAAGAAACATTATGCAAATTTACTCAAGAATAGCTTCAGGGGATGTGACACAGTTATGGAATGC
TGGGTAGCAATAGAAGTAGACTTATAGCCATAAGATAAAGGGGTTTCATTTTGTGGCAAGATAT
TATTAGACTTAGGGCTACCAAAAGTATTTTTATGTAAGAGCATATGCCCCTTAGACTCAAGCTG
AACAACACTGTAATAGGTGAAGAGTATACTTGGTTTGCATATACAGCTTGTTGAACAGGTATGA
TCCAGCATTTTACTCCTTAATGACTTAATTTAGCATGCTTTTAAAAAATCTTAACTGTATTAAG
CACAAAGCAGGTTCGTCTTTGGCTGTGTATAGCACTATACAAATTCCATATATAACTTTTCACC
ATAAGAAAACACATTTCTTAAGAAAAGGTGCAGGGGAATTTTGGAGAAGCAGGCAATGGCTCCT
CAGATGAAGTTTACAGAGTAGGATAATCTAAAAGCAGCAGAATCAGTAGCTGCTGAGTGAAATT
TGCACAATCCCAGTTCCCTCTTAGTACTGCTATCATTTTTCCATGTTCATGAGCACCCAGTGAA
TCTATTTTAAAGTATAAAGCTGGAAATAAGCAAGCATGGTCAATTGAAAATGTGATTGAATGTT
TACCTTTTCTTATGCCTGTGATAATGTAGTTTTTTTATAAAACAAGAAAATCTGCTTCATTTAA
TAGTTCTCAAAGGGCACTCTTTCTTTACATATGAGTTGTATTGATGCATCTGTTTCTTTAAAAA
TGGAGTGTTTCTTAGATTGAACATTGTACTAAATCTGTTAAAATAGGCTATTACTCTACTATGG
GAAGGTCGTTTAGTATCTTAGTTATATTTCTAATTTTATAGAGCATTTATATAGTTAATTCAGT
CAGCCTTTTAAGAAATAGAATACTCCCTTTTGAAGTATCTTGTTCCATAACTTGAAATTCAGCC
TGTGTTAAAAATTGTTCTGTGCTTTCTTACTTCCGTTTTTCCCCTTTTGGGACACAGACTTCCT
TAGGGAGGAGGGAAAGAAAAGTGAATTCTCACTTCAGCCAATAGAACCTAGACTTATAGAGTGT
TTACCTATTTTGCGTAACGCAGGCCCACCCACACACATTATGAGGTGCTTCAGTGAAAGAACAC
TGAGCAGACTGCTTTTCTGTGTGTGATTCCAAGTATAATTGGAAGATGCTTTGGTACTATCTGG
ATTTTATCCTTTGGTGAGAAGGTTGTTGATCTAGCATGTGATAGCAATGGAATAAAGAGGAAAT
AATGCAAAAGGTGTCCCAAGGCTCCTGACCAGTGAACAACGATTTGAGAAAGACAGCCAAGCTC
ATGTTTTCTCCTGATCAAGAAAATCATCCATCCAAAGCACCAGTAAAATATGGTGAACTCATTG
TCTTAGGGTATAATGGATCTCTCCCAAACGGCGATAGAGGAAGGAGGAAAAGTAGGTTTGCTTT
GTTTAAAAGACCTAAGGCAAATGGGGTGAAGCCCAGCACTGTGCATATCGCTTGTACTCCTCAG
GCTGCAAAGGCAATAAGCAACAAGGACCAGCATAGTATATCATATACCTTATCTCGGGCCCAGA
CAGTGGTGGTTGAATATACTCATGACAGCAACACTGATATGTTTCAGATTGGGCGGTCGACTGA
AAGTCCCATTGATTTTGTAGTAACCGATACAGTTCCTGGAAGTCAGAGTAATTCTGATACACAG
TCAGTGCAAAGCACCATATCAAGATTTGCCTGTAGAATCATATGTGAACGGAATCCCCCCTTTA
CAGCACGGATTTATGCTGCAGGATTTGACTCATCAAAAAACATCTTTCTTGGGGAGAAGGCTGC
CAAATGGAAGACATCAGATGGACAGATGGATGGCTTGACCACTAATGGTGTTCTTGTTATGCAT
CCACGCAATGGGTTCACAGAAGACTCCAAGCCTGGAATATGGAGAGAAATATCAGTGTGTGGAA
ATGTATTCAGCCTGCGTGAAACCAGGTCAGCTCAGCAGAGAGGAAAAATGGTGGAAATTGAAAC
CAATCAACTTCAAGATGGCTCATTAATTGACCTCTGTGGTGCAACATTGCTGTGGCGTACTGCA
GAAGGCCTTTCCCACACTCCTACAGTGAAGCATCTGGAAGCTTTAAGACAGGAAATCAATGCAG
CACGACCTCAGTGCCCTGTAGGGTTCAACACACTAGCATTTCCTAGTATGAAGAGGAAAGATGT
CGTTGATGAAAAACAACCATGGGTGTATCTAAACTGCGGCCATGTGCATGGCTATCATAACTGG
GGAAACAAAGAAGAACGTGATGGAAAAGATCGTGAATGTCCTATGTGTAGGTCTGTTGGTCCCT
ATGTCCCTCTGTGGCTTGGATGTGAAGCTGGATTTTATGTGGACGCCGGCCCTCCAACCCATGC
GTTTAGCCCCTGTGGGCATGTGTGTTCAGAGAAGACAACTGCCTATTGGTCCCAGATCCCGCTT
CCTCATGGTACTCACACTTTCCATGCAGCCTGTCCCTTTTGTGCACATCAGTTGGCTGGTGAAC
AAGGCTACATCAGACTCATTTTCCAAGGACCTCTGGACTAACAGACTCTTGTCCTCCAGGACTG
CATTATAAATTTATAAGCTAAGTGATTTGGGTTTTCCAACCTGTTGTCCACATCACAAGTTTTT
CTGCTCTGGTCATTTGCATTAAGATGAAGAATTTTTTTAAGCATTTGTAATAAACAGTAGCGAT
TTCTGAGCAAAAATCTGCGAAACTCAAGCAAAGGGATTTCCGAAAAAGCAGACTTACGAATTCT
GAGTTTTGAAAATATATTTTGAGGAGAAAAAAACATAGTCTAATTTGATGCCTTCATTTTAGTG
TTTTTGAATCACCCATCCTCAGTGTTGAAAAATTGTTTTGTATAACTGAGGGTATTGTTGGTTC
AAACTATGTTAGTTTACAGTTTGTTGCAAACATTGTAAAATACAGCAACATGTATATTAACTTT
TTTCTATTTATCTTTATTATAGAAACTATCTTAGAATGTTCTTTGTAGAGTAGCATGGTGACGA
TGGTCTCACACTCTTGGTGTGAATGGTAGTTTAGCAAGCGTAGCTCAAGGATTTGCAAGGTTAG
GAAGACGGACAAGAGAGCCTCTCTCCCCACCCCCACTTAAGTATGAAATTTGGTAAGTTAGAAT
ACTTTGTAAAACCAAATTCATATTAATTACCATTGTGTAAGAAGTGTTTGTTTTTAACCGCATT
GAAGATAATCGGGAAAGATTTTTTTCCTTAATGTTTCTCCCGAGTGTAGTACTATAACAAAAAT
TTAATGCTAAGAAACATTTTATATGCTCCTTTGAATATGCAATTTAATCTAGATTATCTATTTT
TCTCCCACAATAACTAATCTGTTTTTAGTATTGGCAACATTTGGCAAGTTTGTTTTTTAGATAT
AAACTGTGGTTCATCTGTTCACTGTTTCTAGGGAAAAAAAATCATTCCCACGAGAAAAAGCATA
AATTAACAAGGAGAGTGACTTGATTTGCTTTAAAAAAAAAAAATGCTTAATTAATTTACTGTCC
TGTATTTGGCTTTATCCAGGTGTGAAGACATTTAGAGAGATATAAAGGGTCAAAAGACGACAAT
GCTCTTTTGTTTTTAATCTAACAGACCAGCCTTAACTGTGGGCTTCAATCCTAATAGAGTTGCC
ACAGTGGGACTCAAGGAAATGTATGGTTGGCAGATGAGCACCCGTGACAGCCAAGTGGAGGGAC
ACACTTGCATGGTCAGTTTATTCTCTAATTCCAATAAGTTCTTTGCTTTCAGAAGCAAGAAAAC
ATTTCTTCTTTCTCCCCTCCCCCCCTTTTTTAAACACACCACCAGGAAAGTATAGACAGTTGCA
CTACATCAAACCCTTTGTGACACTTGTAGAAATCAGTACCCTTTTAGATTACACAGAATCATAT
TTTTTAATCTTTTGATTTATTTTCCTTTAGTTCAAAAAGTTGTATAGTACTTAATTGACTAGCA
AATTTTTGTATATGGTAGCATAGCTTTAATTTATCCTATTACAATGCTGTTCTGAATTTTCTTT
AGTTTTTAAAAAAATCAAAATCTGTTGCTTAGAAGTCATGAACTATTTTATTTTACTTCAACTT
GTCAGAATTTCCTTGTTTTTTCAAAAAAAAAATGATCATTTGGGTTCACTCAGGAAATGCATGT
CAGGAAACTTGTATTATAAGTTGACTAGTTGTGATGTATCAGTAACTGCTGTTACCCCTTTTTC
AAAGAAATATAATTGATTTTGAAGTTTTCCAGATTGTCACATGCTTTGTGACTAATGCAAGGAA
ATCAAGTCCTGTGTTGTATTTGTTCTAGTCATTTCTATTCTGGCTATATATTGTAGCTAATTTT
TATTTGCAATTAATTTATTCAAACTAAGTAAATACTTTTCAAAATAGA

hide sequence

RefSeq Acc Id:

XM_021087456 ⟹ XP_020943115

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	77,740,472 - 77,796,911 (+)	NCBI

Sequence:

show sequence

TGTGTGTCAGTGACCCAGAGGCGGAGTGAGGCGGAGGGACCGTCGGGGGGCGCCGCCGCTGCCG
CCTCCAGCAGCAGCACTAGCCGAGCCGCGCGTTCGGGTTTGCCTCGAGCCCTCCGGGAGCGCAT
CACAAAGCGGGCCCCGCGGCTCTCCCTCCGCCCGCGGCTCGTCAGCGCTCAGCTCCGCGGCCAA
CTTCCCCTCGCCGGGCTCGGCCGGCTGGCGCGGAAGGCGGCGGCGGAACGCCGGGCTGTCTGCT
CGCGCTCCCCGCGCACGCACACTTCACCCCCTCGCCCCGGGTCTCGGGGCCGTGCTGGGATTCC
GGCCACCAGCAATTGTCCGGTTTACAGGAGAGGAAACTGAGTCTCGGTACAGCTGGTCCAAGTC
TCGTACCTATTAAATGACAGTGCCAACATAGACAGTCTGACTCCAGAACTCCCTTAACTCACCA
TATCTTACTTCATCTCATCTGGAAATAATGCAAAAGGTGTCCCAAGGCTCCTGACCAGTGAACA
ACGATTTGAGAAAGACAGCCAAGCTCATGTTTTCTCCTGATCAAGAAAATCATCCATCCAAAGC
ACCAGTAAAATATGGTGAACTCATTGTCTTAGGGTATAATGGATCTCTCCCAAACGGCGATAGA
GGAAGGAGGAAAAGTAGGTTTGCTTTGTTTAAAAGACCTAAGGCAAATGGGGTGAAGCCCAGCA
CTGTGCATATCGCTTGTACTCCTCAGGCTGCAAAGGCAATAAGCAACAAGGACCAGCATAGTAT
ATCATATACCTTATCTCGGGCCCAGACAGTGGTGGTTGAATATACTCATGACAGCAACACTGAT
ATGTTTCAGATTGGGCGGTCGACTGAAAGTCCCATTGATTTTGTAGTAACCGATACAGTTCCTG
GAAGTCAGAGTAATTCTGATACACAGTCAGTGCAAAGCACCATATCAAGATTTGCCTGTAGAAT
CATATGTGAACGGAATCCCCCCTTTACAGCACGGATTTATGCTGCAGGATTTGACTCATCAAAA
AACATCTTTCTTGGGGAGAAGGCTGCCAAATGGAAGACATCAGATGGACAGATGGATGGCTTGA
CCACTAATGGTGTTCTTGTTATGCATCCACGCAATGGGTTCACAGAAGACTCCAAGCCTGGAAT
ATGGAGAGAAATATCAGTGTGTGGAAATGTATTCAGCCTGCGTGAAACCAGGTCAGCTCAGCAG
AGAGGAAAAATGGTGGAAATTGAAACCAATCAACTTCAAGATGGCTCATTAATTGACCTCTGTG
GTGCAACATTGCTGTGGCGTACTGCAGAAGGCCTTTCCCACACTCCTACAGTGAAGCATCTGGA
AGCTTTAAGACAGGAAATCAATGCAGCACGACCTCAGTGCCCTGTAGGGTTCAACACACTAGCA
TTTCCTAGTATGAAGAGGAAAGATGTCGTTGATGAAAAACAACCATGGGTGTATCTAAACTGCG
GCCATGTGCATGGCTATCATAACTGGGGAAACAAAGAAGAACGTGATGGAAAAGATCGTGAATG
TCCTATGTGTAGGTCTGTTGGTCCCTATGTCCCTCTGTGGCTTGGATGTGAAGCTGGATTTTAT
GTGGACGCCGGCCCTCCAACCCATGCGTTTAGCCCCTGTGGGCATGTGTGTTCAGAGAAGACAA
CTGCCTATTGGTCCCAGATCCCGCTTCCTCATGGTACTCACACTTTCCATGCAGCCTGTCCCTT
TTGTGCACATCAGTTGGCTGGTGAACAAGGCTACATCAGACTCATTTTCCAAGGACCTCTGGAC
TAACAGACTCTTGTCCTCCAGGACTGCATTATAAATTTATAAGCTAAGTGATTTGGGTTTTCCA
ACCTGTTGTCCACATCACAAGTTTTTCTGCTCTGGTCATTTGCATTAAGATGAAGAATTTTTTT
AAGCATTTGTAATAAACAGTAGCGATTTCTGAGCAAAAATCTGCGAAACTCAAGCAAAGGGATT
TCCGAAAAAGCAGACTTACGAATTCTGAGTTTTGAAAATATATTTTGAGGAGAAAAAAACATAG
TCTAATTTGATGCCTTCATTTTAGTGTTTTTGAATCACCCATCCTCAGTGTTGAAAAATTGTTT
TGTATAACTGAGGGTATTGTTGGTTCAAACTATGTTAGTTTACAGTTTGTTGCAAACATTGTAA
AATACAGCAACATGTATATTAACTTTTTTCTATTTATCTTTATTATAGAAACTATCTTAGAATG
TTCTTTGTAGAGTAGCATGGTGACGATGGTCTCACACTCTTGGTGTGAATGGTAGTTTAGCAAG
CGTAGCTCAAGGATTTGCAAGGTTAGGAAGACGGACAAGAGAGCCTCTCTCCCCACCCCCACTT
AAGTATGAAATTTGGTAAGTTAGAATACTTTGTAAAACCAAATTCATATTAATTACCATTGTGT
AAGAAGTGTTTGTTTTTAACCGCATTGAAGATAATCGGGAAAGATTTTTTTCCTTAATGTTTCT
CCCGAGTGTAGTACTATAACAAAAATTTAATGCTAAGAAACATTTTATATGCTCCTTTGAATAT
GCAATTTAATCTAGATTATCTATTTTTCTCCCACAATAACTAATCTGTTTTTAGTATTGGCAAC
ATTTGGCAAGTTTGTTTTTTAGATATAAACTGTGGTTCATCTGTTCACTGTTTCTAGGGAAAAA
AAATCATTCCCACGAGAAAAAGCATAAATTAACAAGGAGAGTGACTTGATTTGCTTTAAAAAAA
AAAAATGCTTAATTAATTTACTGTCCTGTATTTGGCTTTATCCAGGTGTGAAGACATTTAGAGA
GATATAAAGGGTCAAAAGACGACAATGCTCTTTTGTTTTTAATCTAACAGACCAGCCTTAACTG
TGGGCTTCAATCCTAATAGAGTTGCCACAGTGGGACTCAAGGAAATGTATGGTTGGCAGATGAG
CACCCGTGACAGCCAAGTGGAGGGACACACTTGCATGGTCAGTTTATTCTCTAATTCCAATAAG
TTCTTTGCTTTCAGAAGCAAGAAAACATTTCTTCTTTCTCCCCTCCCCCCCTTTTTTAAACACA
CCACCAGGAAAGTATAGACAGTTGCACTACATCAAACCCTTTGTGACACTTGTAGAAATCAGTA
CCCTTTTAGATTACACAGAATCATATTTTTTAATCTTTTGATTTATTTTCCTTTAGTTCAAAAA
GTTGTATAGTACTTAATTGACTAGCAAATTTTTGTATATGGTAGCATAGCTTTAATTTATCCTA
TTACAATGCTGTTCTGAATTTTCTTTAGTTTTTAAAAAAATCAAAATCTGTTGCTTAGAAGTCA
TGAACTATTTTATTTTACTTCAACTTGTCAGAATTTCCTTGTTTTTTCAAAAAAAAAATGATCA
TTTGGGTTCACTCAGGAAATGCATGTCAGGAAACTTGTATTATAAGTTGACTAGTTGTGATGTA
TCAGTAACTGCTGTTACCCCTTTTTCAAAGAAATATAATTGATTTTGAAGTTTTCCAGATTGTC
ACATGCTTTGTGACTAATGCAAGGAAATCAAGTCCTGTGTTGTATTTGTTCTAGTCATTTCTAT
TCTGGCTATATATTGTAGCTAATTTTTATTTGCAATTAATTTATTCAAACTAAGTAAATACTTT
TCAAAATAGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_020943113	(Get FASTA)	NCBI Sequence Viewer
	XP_020943114	(Get FASTA)	NCBI Sequence Viewer
	XP_020943115	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000026040
	ENSSSCP00000026040.3
	ENSSSCP00000050408
	ENSSSCP00000050408.1
	ENSSSCP00005036586.1
	ENSSSCP00005036594.1
	ENSSSCP00005036598.1
	ENSSSCP00005036602.1
	ENSSSCP00005036619.1
	ENSSSCP00005036625.1
	ENSSSCP00015004622.1
	ENSSSCP00015004642.1
	ENSSSCP00015004677.1
	ENSSSCP00025046119.1
	ENSSSCP00025046132.1
	ENSSSCP00025046149.1
	ENSSSCP00030023538.1
	ENSSSCP00030023543.1
	ENSSSCP00030023557.1
	ENSSSCP00035046897.1
	ENSSSCP00035046931.1
	ENSSSCP00040046128.1
	ENSSSCP00040046182.1
	ENSSSCP00045022858.1
	ENSSSCP00045022895.1
	ENSSSCP00045022934.1
	ENSSSCP00050043286.1
	ENSSSCP00050043288.1
	ENSSSCP00055045758.1
	ENSSSCP00055045784.1
	ENSSSCP00055045809.1
	ENSSSCP00055045839.1
	ENSSSCP00055045871.1
	ENSSSCP00055045899.1
	ENSSSCP00055045922.1
	ENSSSCP00055045947.1
	ENSSSCP00055045982.1
	ENSSSCP00055045995.1
	ENSSSCP00060025217.1
	ENSSSCP00060025225.1
	ENSSSCP00065011929.1
	ENSSSCP00065011931.1
	ENSSSCP00065011933.1
	ENSSSCP00065011935.1
	ENSSSCP00065011937.1
	ENSSSCP00065011940.1
	ENSSSCP00065011944.1
	ENSSSCP00065011949.1
	ENSSSCP00065011954.1
	ENSSSCP00065011958.1
	ENSSSCP00070051533.1
	ENSSSCP00070051539.1
	ENSSSCP00070051544.1

RefSeq Acc Id:

XP_020943113 ⟸ XM_021087454

- UniProtKB:

A0A480ULK7 (UniProtKB/TrEMBL), A0A4X1WC74 (UniProtKB/TrEMBL), A0A8D1HSN0 (UniProtKB/TrEMBL), A0A8D1XX62 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFSPDQENHPSKAPVKYGELIVLGYNGSLPNGDRGRRKSRFALFKRPKANGVKPSTVHIACTPQ
AAKAISNKDQHSISYTLSRAQTVVVEYTHDSNTDMFQIGRSTESPIDFVVTDTVPGSQSNSDTQ
SVQSTISRFACRIICERNPPFTARIYAAGFDSSKNIFLGEKAAKWKTSDGQMDGLTTNGVLVMH
PRNGFTEDSKPGIWREISVCGNVFSLRETRSAQQRGKMVEIETNQLQDGSLIDLCGATLLWRTA
EGLSHTPTVKHLEALRQEINAARPQCPVGFNTLAFPSMKRKDVVDEKQPWVYLNCGHVHGYHNW
GNKEERDGKDRECPMCRSVGPYVPLWLGCEAGFYVDAGPPTHAFSPCGHVCSEKTTAYWSQIPL
PHGTHTFHAACPFCAHQLAGEQGYIRLIFQGPLD

hide sequence

RefSeq Acc Id:

XP_020943115 ⟸ XM_021087456

- UniProtKB:

A0A480ULK7 (UniProtKB/TrEMBL), A0A4X1WC74 (UniProtKB/TrEMBL), A0A8D1HSN0 (UniProtKB/TrEMBL), A0A8D1XX62 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFSPDQENHPSKAPVKYGELIVLGYNGSLPNGDRGRRKSRFALFKRPKANGVKPSTVHIACTPQ
AAKAISNKDQHSISYTLSRAQTVVVEYTHDSNTDMFQIGRSTESPIDFVVTDTVPGSQSNSDTQ
SVQSTISRFACRIICERNPPFTARIYAAGFDSSKNIFLGEKAAKWKTSDGQMDGLTTNGVLVMH
PRNGFTEDSKPGIWREISVCGNVFSLRETRSAQQRGKMVEIETNQLQDGSLIDLCGATLLWRTA
EGLSHTPTVKHLEALRQEINAARPQCPVGFNTLAFPSMKRKDVVDEKQPWVYLNCGHVHGYHNW
GNKEERDGKDRECPMCRSVGPYVPLWLGCEAGFYVDAGPPTHAFSPCGHVCSEKTTAYWSQIPL
PHGTHTFHAACPFCAHQLAGEQGYIRLIFQGPLD

hide sequence

RefSeq Acc Id:

XP_020943114 ⟸ XM_021087455

- UniProtKB:

A0A480ULK7 (UniProtKB/TrEMBL), A0A4X1WC74 (UniProtKB/TrEMBL), A0A8D1HSN0 (UniProtKB/TrEMBL), A0A8D1XX62 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFSPDQENHPSKAPVKYGELIVLGYNGSLPNGDRGRRKSRFALFKRPKANGVKPSTVHIACTPQ
AAKAISNKDQHSISYTLSRAQTVVVEYTHDSNTDMFQIGRSTESPIDFVVTDTVPGSQSNSDTQ
SVQSTISRFACRIICERNPPFTARIYAAGFDSSKNIFLGEKAAKWKTSDGQMDGLTTNGVLVMH
PRNGFTEDSKPGIWREISVCGNVFSLRETRSAQQRGKMVEIETNQLQDGSLIDLCGATLLWRTA
EGLSHTPTVKHLEALRQEINAARPQCPVGFNTLAFPSMKRKDVVDEKQPWVYLNCGHVHGYHNW
GNKEERDGKDRECPMCRSVGPYVPLWLGCEAGFYVDAGPPTHAFSPCGHVCSEKTTAYWSQIPL
PHGTHTFHAACPFCAHQLAGEQGYIRLIFQGPLD

hide sequence

RefSeq Acc Id:

ENSSSCP00000050408 ⟸ ENSSSCT00000040046

RefSeq Acc Id:

ENSSSCP00000008929 ⟸ ENSSSCT00000009160

RefSeq Acc Id:

ENSSSCP00000026040 ⟸ ENSSSCT00000028590

Protein Domains

Pellino FHA Pellino RING

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000028947	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005037104	UniProtKB/TrEMBL
	ENSSSCG00015008884	UniProtKB/TrEMBL
	ENSSSCG00025075387	UniProtKB/TrEMBL
	ENSSSCG00030037168	UniProtKB/TrEMBL
	ENSSSCG00035079235	UniProtKB/TrEMBL
	ENSSSCG00040073969	UniProtKB/TrEMBL
	ENSSSCG00045019375	UniProtKB/TrEMBL
	ENSSSCG00050073153	UniProtKB/TrEMBL
	ENSSSCG00055028836	UniProtKB/TrEMBL
	ENSSSCG00060043423	UniProtKB/TrEMBL
	ENSSSCG00065021971	UniProtKB/TrEMBL
	ENSSSCG00070030081	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000028590	ENTREZGENE
	ENSSSCT00000028590.4	UniProtKB/TrEMBL
	ENSSSCT00000040046	ENTREZGENE
	ENSSSCT00000040046.3	UniProtKB/TrEMBL
	ENSSSCT00005059248.1	UniProtKB/TrEMBL
	ENSSSCT00005059270.1	UniProtKB/TrEMBL
	ENSSSCT00005059280.1	UniProtKB/TrEMBL
	ENSSSCT00005059285.1	UniProtKB/TrEMBL
	ENSSSCT00005059309.1	UniProtKB/TrEMBL
	ENSSSCT00005059316.1	UniProtKB/TrEMBL
	ENSSSCT00015011724.1	UniProtKB/TrEMBL
	ENSSSCT00015011763.1	UniProtKB/TrEMBL
	ENSSSCT00015011842.1	UniProtKB/TrEMBL
	ENSSSCT00025103950.1	UniProtKB/TrEMBL
	ENSSSCT00025103978.1	UniProtKB/TrEMBL
	ENSSSCT00025104010.1	UniProtKB/TrEMBL
	ENSSSCT00030051689.1	UniProtKB/TrEMBL
	ENSSSCT00030051699.1	UniProtKB/TrEMBL
	ENSSSCT00030051718.1	UniProtKB/TrEMBL
	ENSSSCT00035108282.1	UniProtKB/TrEMBL
	ENSSSCT00035108347.1	UniProtKB/TrEMBL
	ENSSSCT00040102187.1	UniProtKB/TrEMBL
	ENSSSCT00040102266.1	UniProtKB/TrEMBL
	ENSSSCT00045032968.1	UniProtKB/TrEMBL
	ENSSSCT00045033029.1	UniProtKB/TrEMBL
	ENSSSCT00045033089.1	UniProtKB/TrEMBL
	ENSSSCT00050099937.1	UniProtKB/TrEMBL
	ENSSSCT00050099940.1	UniProtKB/TrEMBL
	ENSSSCT00055057200.1	UniProtKB/TrEMBL
	ENSSSCT00055057228.1	UniProtKB/TrEMBL
	ENSSSCT00055057258.1	UniProtKB/TrEMBL
	ENSSSCT00055057297.1	UniProtKB/TrEMBL
	ENSSSCT00055057340.1	UniProtKB/TrEMBL
	ENSSSCT00055057373.1	UniProtKB/TrEMBL
	ENSSSCT00055057397.1	UniProtKB/TrEMBL
	ENSSSCT00055057426.1	UniProtKB/TrEMBL
	ENSSSCT00055057470.1	UniProtKB/TrEMBL
	ENSSSCT00055057484.1	UniProtKB/TrEMBL
	ENSSSCT00060058889.1	UniProtKB/TrEMBL
	ENSSSCT00060058903.1	UniProtKB/TrEMBL
	ENSSSCT00065029226.1	UniProtKB/TrEMBL
	ENSSSCT00065029233.1	UniProtKB/TrEMBL
	ENSSSCT00065029238.1	UniProtKB/TrEMBL
	ENSSSCT00065029240.1	UniProtKB/TrEMBL
	ENSSSCT00065029244.1	UniProtKB/TrEMBL
	ENSSSCT00065029247.1	UniProtKB/TrEMBL
	ENSSSCT00065029253.1	UniProtKB/TrEMBL
	ENSSSCT00065029260.1	UniProtKB/TrEMBL
	ENSSSCT00065029266.1	UniProtKB/TrEMBL
	ENSSSCT00065029270.1	UniProtKB/TrEMBL
	ENSSSCT00070060480.1	UniProtKB/TrEMBL
	ENSSSCT00070060487.1	UniProtKB/TrEMBL
	ENSSSCT00070060492.1	UniProtKB/TrEMBL
InterPro	Pellino_fam	UniProtKB/TrEMBL
	Pellino_FHA	UniProtKB/TrEMBL
	Pellino_RING	UniProtKB/TrEMBL
NCBI Gene	PELI1	ENTREZGENE
PANTHER	E3 UBIQUITIN-PROTEIN LIGASE PELLINO HOMOLOG 1	UniProtKB/TrEMBL
	PTHR12098	UniProtKB/TrEMBL
Pfam	Pellino	UniProtKB/TrEMBL
	Pellino_RING	UniProtKB/TrEMBL
PIRSF	Pellino	UniProtKB/TrEMBL
UniProt	A0A480ULK7	ENTREZGENE
	A0A4X1WC74	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1WC78_PIG	UniProtKB/TrEMBL
	A0A8D0WMM7_PIG	UniProtKB/TrEMBL
	A0A8D1BN06_PIG	UniProtKB/TrEMBL
	A0A8D1HSN0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1XX62	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A480ULK7	UniProtKB/TrEMBL
	I3LPL3	UniProtKB/TrEMBL
VGNC ID	VGNC:91306	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations